伪狂犬病病毒Ea株UL6基因的克隆、序列分析及表达

以伪狂犬病病毒Ea株基因组DNA为模板,通过PCR扩增UL6全长基因,将PCR产物克隆于pMD18-T载体,并采用双脱氧终止法进行序列测定.序列分析显示UL6全长1 938 bp,可编码646个氨基酸.将该基因克隆到插入原核表达载体pET28a的6×His下游,获得原核表达质粒pET28a-UL6,转化大肠埃希菌BL21,经IPTG诱导在大肠埃希菌中成功表达获得分子质量约70 ku的融合表达蛋白6×His-UL6,Western blot证实,表达的融合蛋白能与抗6×His的单克隆抗体发生特异性反应.根据测定的序列,设计一对能扩增UL6基因完整编码区的引物,PCR扩增UL6基因并将其插入真核表达载体pEGFP-C2中EGFP基因的3'端,获得与EGFP融合表达的真核表达质粒pEGFP-UL6,转染Hela细胞,通过激光共聚焦显微镜观察发现,转染48 h,融合蛋白EGFP-UL6主要定位在胞浆,为进一步研究伪狂犬病病毒Ea株UL6基因的结构和功能奠定了基础.     

胡麻异质型ACCase亚基基因的克隆与表达分析

为研究胡麻异质型乙酰辅酶A羧化酶BCCP、BC、α-CT和β-CT四个亚基基因的生物学功能,采用基因克隆、生物信息学和RT-PCR技术分别对胡麻accA、accB、accC和accD 4个基因进行分析。结果发现陇亚10号accA基因编码α-CT亚基,CDS序列全长为2364 bp,编码787个氨基酸;accB基因编码BCCP亚基,CDS序列全长为1173 bp,编码275个氨基酸;accC基因编码BC亚基,CDS序列全长为1574 bp,编码527个氨基酸;accD基因编码β-CT亚基,CDS序列全长为1137 bp,编码378个氨基酸,且4个基因编码的蛋白都是脂肪酸系数较高的亲水性蛋白。RT-PCR结果表明,胡麻accA、accB、accC和accD 4个基因在3个胡麻品种(高含油量的张亚2号、中含油量的陇亚10号和低含油量的R2-17)的不同时期不同组织的表达模式不同,accA、accB、accC和accD四个基因在R2-17、陇亚10号和张亚2号3个胡麻品种所有时期的不同组织中均有表达,但在种子中的表达量均明显高于其他组织,尤其在种子发育10~25 d油脂快速积累时期,4个基因的表达量都迅速增加并达到最高峰。研究表明异质型乙酰辅酶A羧化酶基因可能调控胡麻种子发育前期油脂的合成积累。     

Nucleotide sequence and polymerase chain reaction/restriction fragment length polymorphism analyses of Aleutian disease virus in ferrets in Japan.

Two ferrets with spontaneous Aleutian disease (AD) were found in Japan. The diagnosis was verified by polymerase chain reaction (PCR) amplification of part of the capsid gene specific to AD virus (ADV). The nucleotide sequences (365 bp in length) of the amplified fragments from the 2 ferrets differed by a single nucleotide, producing an amino acid alteration. Compared with other types of ADV, these isolates had 96% sequence similarity to a published ferret ADV (FADV) in contrast to <91% homology to various types of mink ADV (MADV). The phylogenetic tree of ADVs indicates that these 2 isolates and the published FADV belong to the same genetic group and definitely are divergent from MADVs. The predicted amino acid sequence of the hypervariable segment in the capsid gene was conserved among the 3 types of FADV. These results indicated that the 2 isolates found in Japan were new DNA types of FADV and could have been derived from FADV(s). A restriction fragment length polymorphism (RFLP) method to distinguish the ferret types of ADV from the mink types of ADV was developed on the basis of differences in their nucleotide sequences. Digestion of the PCR products with Afal or ScaI provided different cleavage patterns for FADV and MADV. This PCR/RFLP analysis of the ADV capsid gene will be a valuable asset for diagnosis of this virus infection in ferrets.     

鸡传染性喉气管炎病毒WG株ICP4基因的鉴定及其在潜伏位点的表达

根据传染性喉气管炎病毒(Infectious laryngotracheitis virus,ILTV)SA-2株ICP4基因序列设计并合成3对引物,以ILTV中国王岗株(WG)DNA为模板扩增ICP4基因,并对其进行了序列测定。将ILTV WG株的ICP4基因及其推导的氨基酸序列,分别与ILTV SA-2株、BHV-1、EHV-1、EHV-4、MDV-1、MDV-2、HVT、PRV、VZV、HSV-1和HSV-2的ICP4基因及其推导的氨基酸序列比较后发现,ILTV毒株之间ICP4基因相对保守,核苷酸和氨基酸水平的同源性分别为99.7%和99.1%,但与其它α-疱疹病毒的ICP4基因的同源性则较低,低于3.0%。对潜伏感染鸡三叉神经节中病毒基因的检测显示,在人工感染ILTV WG株后第10 d～60 d内均能检测到ICP4特异RNA,而gB、gC、TK则未能检出。鉴于目前国内外对α-疱疹病毒潜伏感染相关基因以及ICP4基因序列和结构功能的研究,ILTV WG株ICP4基因的克隆和序列测定,以及病毒基因在潜伏感染鸡三叉神经节中的差异表达,为进一步研究ICP4基因的功能及确定潜伏感染相关基因奠定了基础。     

水貂阿留申病病毒分子生物学研究进展

水貂阿留申病病毒是一种在水貂中广泛存在的重要病原体.该病毒属阿留申病毒属,主要编码4种蛋白(结构蛋白VP1、VP2和非结构蛋白NS1、NS2).VP1蛋白在协助病毒产生感染性方面起着重要作用;VP2蛋白是该病毒的主要免疫原性抗原,能体外中和病毒;NS1和NS2对病毒在宿主细胞中的复制起重要的调节作用.该病毒的分子生物学诊断技术主要有核酸杂交技术、PCR和基因芯片检测技术.     

Cytokine mRNA expression and pathological findings in pigs inoculated with African swine fever virus (E-70) deleted on A238L

African swine fever virus (ASFV) induces a variety of immune responses and clinical forms in domestic pigs. As it is the only member of the Asfarviridae family, ASFV encodes many novel genes not encoded by other virus families. Among these genes, A238L may regulate the synthesis of pro-inflammatory cytokines, controlled mainly by NFkappaB and NFAT pathways. In this study, we inoculated two groups of pigs, one with the ASFV highly virulent E-70 isolate, deleted on A238L gene, and the other group with the parental E-70 isolate. No significant differences were observed in the clinical signs or pathology between both groups. However, the TNF-alpha mRNA expression was strongly enhanced in the PBMC from pigs inoculated with the virus deleted in A238L, reinforcing the role of the A238L gene in the inhibition of the NFkappaB pathway of expression of cytokines. No up-regulation of pro-inflammatory cytokines was observed in the PBMC of animals inoculated with the E-70 isolate, even though apoptosis and haemorrhages were evident and might be related to the presence of bystander monocyte-macrophages expressing these cytokines. Other studies using ASFV deleted in other genes inoculated in the natural hosts should be performed to gain further insight into the role of these genes in the pathogenesis of ASF.     

柞蚕核型多角体病毒odv-e56基因的克隆与分析

为获得柞蚕核型多角体病毒(Antheraea pernyinucleopolyhedrovirus,ApNPV)基因组序列,采用随机克隆方法,建立ApNPV的质粒基因文库,并通过对插入片段进行克隆鉴定和序列分析,获得了编码包涵体衍生型病毒特异囊膜蛋白基因odv-e56。该基因上游具有晚期调控保守序列TTAAG,是一个晚期表达基因,阅读框为1125bp,共编码374个氨基酸。核苷酸和氨基酸同源性比较结果表明:ApNPV的odv-e56基因与黄杉毒蛾多角体病毒(OpNPV)和云杉卷叶蛾核型多角体病毒(CfNPV)的同源性较高,而与松树小叶蜂核型多角体病毒(NlNPV)和松环螺旋多角体病毒(NsNPV)的同源性最低。由此认为,杆状病毒科的odv-e56基因在进化上存在两种进化方式:一类以点突变为主,基因长度变化不明显;另一类突变以小片段的碱基增减为特征。     

鸭瘟病毒的分子生物学研究进展

鸭瘟病毒属疱疹病毒科、α-疱疹病毒亚科。其核酸结构为线状双股 DNA,衣壳为二十面体对称 ,有囊膜。鸭瘟病毒的 DNA具典型的疱疹病毒 DNA的特征 ,大小约为 1 50 kb,两端为末端重复序列 ,中间有内部重复序列。囊膜蛋白为疱疹病毒的主要保护性抗原 ,它在介导病毒进入细胞 ,以及病毒的成熟与释放中均起重要的作用。疱疹病毒的囊膜蛋白主要有糖蛋白 B( Glycoprotein B,g B)、g C、g D、g E、g I等。其他蛋白如 Ul3 6、Ul3 7等在病毒的成熟与释放中也起重要的作用。国内外已有多人建立起鸭瘟的PCR检测方法 ,而其基因工程疫苗的研究报道较少。但参考其他疱疹病毒特别是伪狂犬病的基因工程疫苗的研究 ,可以推测鸭瘟的基因工程疫苗研究也大有可为。     

Isolation and characterization of monoclonal antibodies against structural proteins of infectious laryngotracheitis virus

Thirteen infectious laryngotracheitis virus (ILTV)-specific monoclonal antibodies (MAbs) were isolated after immunization of mice with purified infectious laryngotracheitis virions. On the basis of their reactions in western blot analyses of ILTV-infected cells, the MAbs were assigned to five different virus proteins or protein groups. Two of the viral target proteins could be identified after transient expression of cloned ILTV genes in eucaryotic cells. The MAbs of group II detected a 60-kD protein that was shown to be the ILTV homologue of herpes simplex virus type 1 (HSV-1) glycoprotein (g)C. The MAbs of group I reacted with the positional homologue of HSV-1 gJ, which is encoded by the open reading frame (ORF) 5 gene within the unique short genome region of ILTV. The ORF 5 gene product of ILTV was previously described as a 60-kD glycoprotein (gp60), whereas multiple protein bands with apparent molecular masses of 85, 115, 160, and 200 kD were identified in the present study. Immunoelectron microscopy revealed that both gC and gJ of ILTV are localized in the envelope of virus particles, whereas the 15-kD protein detected by the MAbs of group III presumably represents a tegument component. Immunofluorescence analyses of infected cells demonstrated that the epitopes of the gC- and gJ-specific MAbs are conserved in all tested ILTV isolates originating from different parts of the world and that these MAbs are also suitable for in situ antigen detection in tissues of ILTV-infected chickens. The remaining ILTV-specific MAbs recognized viral proteins of 22 kD (group IV) and 38 kD (group V) that were not further characterized up to now.     

Sequencing and mutational analysis of the non-coding regions of influenza A virus

The genome of influenza A virus consists of eight negative-stranded RNA segments which contain one or two coding regions flanked by the 3' and 5' non-coding regions (NCRs). Despite the importance of NCRs in replication and pathogenesis of influenza virus, sequencing of influenza virus genome has mainly been focused on coding regions of the individual genes and very limited NCR sequences are available. In this study, we sequenced the NCRs of seven influenza A virus strains of different host origin and varying pathogenicity using two recently developed methods [de Wit, E., Bestebroer, T.M., Spronken, M.I., Rimmelzwaan, G.F., Osterhaus, A.D., Fouchier, R.A., 2007. Rapid sequencing of the non-coding regions of influenza A virus. J. Virol. Methods 139, 85-89; Szymkowiak, C., Kwan, W.S., Su, Q., Toner, T.J., Shaw, A.R., Youil, R., 2003. Rapid method for the characterization of 3' and 5' UTRs of influenza viruses. J. Virol. Methods 107, 15-20]. In addition to sequence and length variation present in the segment-specific NCRs among different influenza strains, we also observed sequence variations at the fourth nucleotide of 3' NCR of polymerase genes. To evaluate the role of sequence change in the NCRs in reporter gene expression, we introduced mutations at the NCRs of two polymerase gene segments, PB1 and PA, and created the green fluorescent protein (GFP) reporter plasmids. By measuring the GFP expression level, we confirmed that single or two mutations introduced at the 3' and 5' NCRs of PB1 and PA gene could alter the protein expression levels. Our study reaffirms the importance of NCRs in influenza virus replication and further analysis of their roles will lead to better understanding of influenza pathogenesis.     

Towards non-invasive imaging of HSV-1 vector-mediated gene expression by positron emission tomography

The overall goals of the broad and growing field of molecular medicine is to identify fundamental errors of disease and to develop corrections of them on the molecular level. At the same time, real-time imaging of gene expression in vivo aims towards a detailed analysis of both endogenous and exogenous gene expression in animal models of disease and in the clinical setting. Non-invasive imaging of endogenous gene expression may reveal insight into the molecular basis of disease pathogenesis and the extent of treatment response. When exogenous genes are introduced, e.g. by herpes simplex virus type 1 (HSV-1)-based vectors, to ameliorate a genetic defect or to add an additional gene function to cells, imaging techniques may reveal the assessment of the location, magnitude and duration of therapeutic gene expression and its correlation to the therapeutic effect. Here, we review the main approaches of non-invasive imaging techniques of gene expression in vivo with special reference to HSV-1 vector-mediated gene expression.