Genotype × cropping system interaction in climbing beans (Phaseolus vulgaris L.) grown as sole crop and in association with maize (Zea mays L.)

The selection of cultivars for the predominant cropping systems of small farms in the tropics depends to a large extent on the information obtained by testing their performance across the different systems. The main objective of this experiment was to measure the genotype × cropping system (G × CS) interaction for yield and selected agronomic traits of climbing beans (Phaseolus vulgaris L.) grown as sole crop and intercropped with two morphologically contrasting maize (Zea mays L.) cultivars. A secondary objective was to identify the most efficient and productive bean–maize intercrop combinations. Seven climbing bean genotypes were grown as sole crop and intercropped with two maize varieties, BH 140 (Mix. 1) and Guto (Mix. 2), in a factorial arranged Randomized Complete Block Design with three replications at Bako Agricultural Research Center in western Ethiopia. Main effects due to genotype and cropping system (except days to flowering) were significant for all bean traits considered. The genotypes × cropping system interaction terms were also significant for the number of seeds per pod, 100-seed weight, harvest index and seed yield. While bean seed yield significantly correlated with the number of seeds per pod (in Mix. 1) and with harvest index (in both mixtures), positive and significant correlations occurred with the number of pods per plant and 100-seed weight under sole cropping system. The correlation between bean seed yields of Mix. 1 and Mix. 2 and between Mix. 2 and sole crop were positive and significant. No such relationship was found between Mix. 1 and sole crop. The results suggest that selection of suitable climbing bean cultivars for intercropping with maize varieties predominantly grown in the area should be made under the associated culture of the two crops. Intercropping contributed to a significant reduction in seed yield of the bean genotypes due mainly to its adverse effects on the numbers of pods per plant and seeds per pod. The index tLER₁ identified most bean–maize genotype combinations of Mix. 2 as biologically more efficient system than Mix. 1. On the other hand, tLER₂ values of more than 1.00 for all treatments of Mix. 2 demonstrated higher overall productivity of the intercrop system when the bean genotypes were grown in association with a late-maturing and high yielding maize hybrid BH 140.     

Variation in traits affecting nodulation of common bean under intercropping with maize and sole cropping

Common bean (Phaseolus vulgaris L.), an important food crop in Europe, America, Africa and Asia, is thought to fix only small amounts of atmospheric nitrogen. It contributes significantly to the sustainability of traditional cropping systems because of the predominance of small-scale farmers who cultivate beans in those areas. The objectives of this work were to evaluate bush bean varieties under common agronomic cropping systems and to evaluate breeding lines under low N-fertility sole cropping and intercropping systems. The purpose of the study was to characterize the genotype and cropping system's variability in symbiotic and plant characters and to identify the most suitable genotypes to establish an effective symbiosis with indigenous strains of Rhizobium. No significant differences among the bush bean varieties evaluated under typical fertilization practices were observed for N₂-fixation and plant traits except for seed nitrogen. Significant differences among the bean lines studied under low N-fertilization conditions were detected for plant growth,plant component and N₂-fixation traits. A significant interaction of bean genotype x cropping system was found for number of nodules per plant and nodule moisture on the bush bean varieties studied, and for days to emergence, days to flowering, end of flowering, shoot length, root dry weight and shoot nitrogen on the bean lines evaluated. Nodulation parameters were correlated positively with the yield components, shoot and root parts and duration of flowering, and correlated negatively with seed crude protein, pod and seed dimensions and seed dry weight. These observations indicate that it may be possible to increase both the symbiotic N₂-fixation and seed yield through plant breeding. This revised version was published online in August 2006 with corrections to the Cover Date.     

Interrelationships between cropping systems for pod and seed quality components and breeding implications in common bean

Breeding programmes in common bean (Phaseolus vulgaris L.) have mainly focused on performance under monoculture conditions. Interactions among cultivars and cropping systems do occur and genotypes bred for pure cropping may not be suitable for intercropping. This study was undertaken to obtain estimates of genetic parameters of quality traits for bush bean landraces grown in two cropping systems, and the interrelationships of these traits between pure cropping and intercropping with maize (Zea mays L.). Field experiments were conducted at two locations for two years. Expression of most traits was not strongly influenced by genotype × environment interactions. Heritability estimates were similar in both cropping systems for most pod and seed quality traits. Positive correlations were observed between pure cropping and intercropping for pod characters (weight, length, width and texture) and seed characters (dry and imbided weight, length, hardness, coat proportion, water absorption and crude protein). Use of a selection index is suggested for breeding for seed size, water absorption,coat proportion and crude protein for both cropping systems. However, larger gains would be expected in pure cropping for most traits. Bean accessions PHA-0267, PHA-0285, PHA-0286 and PHA-0299 should be used for developing acceptable culinary and high protein breeding lines for either cropping system. This revised version was published online in August 2006 with corrections to the Cover Date.     

Nutritional and culinary quality of bush bean populations intercropped with maize

Summary The intereropping of common bean (Phaseolus vulgaris L.) and maize (Zea mays L.) is a common practice in the Northwest of the Iberian Peninsula. In this experiment, 25 populations of bush bean were evaluated for nutritional and culinary traits of dry seed and immature pod in sole crop and in intercrop in two years and in two locations, in order to determine whether selection of bush bean in sole crop can result in genetic progress for intercrop.There were no differences in the population means between cropping systems. Significant differences were detected among populations for all traits tudied except starch content, crude ash, water absorption and coat proportion. Population x environment interaction was significant for pod thickness. Bean populations did not interact with cropping systems for any trait, although there were differences between cropping systems for crude protein. These results suggest that a sole crop system provides sufficient information to select bean populations efficiently for the bush bean-maize intercropping system, although the advanced generations of the breeding program should be tested for quantitative traits such as protein content in the appropriate cropping system (intercropping) to know the competitive ability with the associated species. This would permit to choose bush bean populations which complement more efficiently and would be less competitive with the maize population.     

A Multivariate Analysis of Soybean Genotypes Grown Under Different Cropping Systems

Nature and magnitude of genetic diversity was assessed using Mahalanobis's D² statistics and canonical analysis in 50 genotypes of soybean grown in monoculture and in association with maize. All the genotypes were grouped in 10 clusters in case of monoculture, while 8 clusters were formed for intercropping. Monoculture was more suitable environment for expressing the genetic diversity than intercrop. Some genotypes had consistently the similar clustering pattern in both the cropping systems, while others were affected by the cropping system in expressing the genetic diversity. This was confirmed by the canonical analysis. Days to flowering and maturity, seed yield/plant, plant height and 100-seed weight were mainly responsible for genetic diversity in monoculture. Besides phenological traits, pod length and width, and seed yield/plant exerted marked influence on the genetic diversity of soybean genotypes grown in association with maize. Geographical distribution was not necessarily reflected by the genetic divergence, though some degree of relationship between geographic diversity and genetic diversity was evident under both the cropping systems. The performance of some genotypes varied from cropping system to another, while that of others remained unaffected. Breeding programmes to develop varieties suitable for sole crop, intercrop and both the cropping systems have been suggested.     

Genotype × environment interaction and yield stability in a cowpea-based cropping system

Twenty-four cowpea genotypes were evaluated under sole cropping or additive series intercropping with sorghum from 2004 to 2005 at four sites representative of the Guinea and Sudan savannah ecologies in Ghana. The aim was to determine whether cowpea breeding programs that emphasize selection under sole-crop conditions have the potential to produce cultivars that are effective under additive series intercropping. Genotype × cropping systems interaction was significant for days to 50% flowering but not for grain yield, biomass and other studied traits. Genotypic yield reaction to cropping systems indicated that bridging the yield gap between sole cropping and intercropping systems is best addressed by agronomic interventions that reduce stress on intercrop cowpea rather than by selecting for specifically adapted genotypes for intercropping. Significant genotype × environment interactions were observed for all traits when data was pooled over cropping systems. Partitioning of the genotype × environment interaction variance indicated that days to 50% flowering was dominated by heterogeneity of genotypic variance, whereas genotype × environment interactions for grain yield and biomass was mainly due to imperfect correlations. Large differences in genotypic yield stability were observed as estimated by the among-environment variance, regression of yield on the environmental index, Kataoka’s index, and by partitioning of genotype × environment interaction sum of squares into components attributable to each genotype. The results suggest that in regions where genotype × environment interaction for yield frequently causes re-ranking across environments, genotypes with the least contribution to the interaction sum of squares are likely to be most productive. On the whole, the results support the contention that breeding under sole-crop conditions has the potential to produce cultivars effective under intercropping conditions.     

Relationship between barley grain yield measured in low- and high-yielding environments

Summary The paper addresses the general question of identifying the optimum environment for selection in plant breeding programs for low input agricultural systems. After defining low-yielding and high-yielding environments based on the average grain yield of large numbers of barley genotypes in different cropping seasons, we examined: 1) the phenotypic relationships between the highest yielding genotypes in low- and high-yielding environments, and 2) the genetic correlation coefficients between grain yield in low- and high-yielding environments. The results indicate that the alleles controlling high grain yield in low-yielding conditions are at least partially different from those controlling high grain yield in high-yielding conditions. Therefore, selection in high-yielding environments is expected to produce a negative response or no response in low-yielding environments. This may explain why crop varieties bred under high-yielding conditions failed to have an impact in low-yielding agricultural systems. The results may be extrapolated to systems where environmental concern suggests a reduction of inputs by raising the question of whether crop breeding programs based on selection under high inputs are likely to generate the right type of germplasm for an environmentally friendly agriculture.     

Breeding for provitamin A biofortification of maize (Zea mays L.)

Vitamin A deficiency is widely prevailing in children and women of developing countries. Deficiency of vitamin A causes night blindness, growth retardation, xerophthalmia and increases the susceptibility against epidemic diseases. Among different interventions of overcoming malnutrition, biofortification is the most acceptable and preferred intervention among researchers, growers and consumers. Maize is grown and consumed in those regions where vitamin A deficiency is most prevalent; thus, targeting this crop for provitamin A biofortification is the most appropriate solution. Different breeding strategies including diversity analysis, introduction and stability analysis of exotic germplasm, hybridization, heterosis breeding, mutagenesis and marker‐assisted selection are practised for exploring maize germplasm and development of provitamin A‐enriched cultivars. Genome‐wide association selection and development of transgenic maize genotypes are also being practised, whereas RNA interference and genome editing tools could also be used as potential strategies for provitamin A biofortification of maize genotypes. The use of these breeding strategies for provitamin A biofortification of maize is comprehensively reviewed to provide a working outline for maize breeders.     

Evaluation of Intercropping Cassava/Corn/Beans (Phaseolus vulgaris L.) in Northeast Brazil

Cassava, corn and drybeans were tested under sole cropping and under all possible intercropping combinations in Paraiba State, Northeast Brazil. The crops were planted with and without fertilizer (N, P, K), which generated fourteen cropping systems. Yields of beans were not affected by either intercropping systems or fertilization. Yields of corn and cassava were affected by intercropping systems, fertilizer, and cropping systems fertilizer interaction. LER values were significantly different among cropping systems but were not affected by fertilization. This indicates that the advantage of intercropping was not improved by the addition of nutrients.     

Evaluation of Upland Rice (Oryza sativa L.) Genotypes for Intercropping with Pigeon Pea (Cajanus cajan [L.] (Mill sp.))

Eleven upland rice genotypes of varying growth duration and plant stature were evaluated in two cropping systems: monocrop and intercrop, with pigeon pea cv. U pas 120, in order to study the effects of intercropping on rice grain yield and its contributing characteristics during 1990 to 1992 wet seasons. Cropping system and cropping system × genotype interaction effects were significant for yield ha⁻¹, panicle weight, panicles m⁻² and spikelet fertility suggesting the need for evaluating and selecting genotypes suitable for intercropping. Rice grain yield reduction in the intercrop ranged from 24.5 % in genotype RR 203-16 to 54.5 % in genotype Aditya. Panicle weight, total dry matter at flowering as well as at harvest, and harvest index were also reduced. Plant height and panicle weight were positively associated with yield in both systems, however, the yield was positively and significantly correlated with spikelets per panicle and spikelet fertility with the intercropping system. The correlation between cropping systems indicated the possibility of simultaneous improvement for these characteristics in monocropping and intercropping.     

Field screening of soya bean (Glycine max (L.) Merrill) germplasm for aluminium tolerance by the use of augmented design

Summary Selection for aluminium tolerance is necessary to adapt the soya bean crop to vast areas of acid soil in the tropics such as the Brazilian Savannas (Cerrados). The breeding programmes include field testing of large numbers of varieties. The tests are laborious, time consuming and need to be repeated to minimize effects of uncontrolled environmental factors. The present results show that augmented designs are efficient in the identification of Al-tolerant genotypes. These designs (i) allow elimination of soil differences as common causes for error in comparison of entries, and (ii) can be successfully employed in genetic studies and breeding programmes for crop improvement, being more cost effective than fully replicated trials.     

Evaluating the potential for farmer and plant breeder collaboration: A case study of farmer maize selection in Oaxaca, Mexico

Formal plant breeders could contribute much to collaboration with farmers for improving crop varieties for local use. To do so outside researchers must have some understanding of local selection practices and their impact on crop populations in terms of the genetic theory underlying plant breeding. In this research we integrated methods from social and biological sciences to better understand selection and its consequences from farmers' perspectives but based on the concepts used by plant breeders. Among the households we worked with, farmers' selection practices were not always effective yet they understood the reasons for this and had no expectations for response to selection in some traits given the methods available to them. Farmers' statements, practices and genetic perceptions regarding selection and the genetic response of their maize populations to their selection indicate selection objectives different than may be typically assumed, suggesting a role for plant breeder collaboration with farmers. This revised version was published online in July 2006 with corrections to the Cover Date.     

Linkage analysis among loci for RAPDs, isozymes and some agronomic traits in Brassica campestris L.

Common bean, Phaseolus vulgaris L. is intercropped or relay cropped with maize in many Andean highlands of Colombia and Peru. Breeding beans for the target multiple cropping systems is essential for the development of productive and sustainable agriculture for the Andean smallholders. Outline of the breeding programme should follow the farming system approach with the establishment of on-farm trials and early farmers involvement. Bean breeding is oriented to minimize intercrop competition and to stabilize complementarity with maize. Genetic traits needed for improved varieties are divided as follows : traits not interacting with the cropping systems, traits specific to intercrops and traits related with socioeconomic and seed quality aspects. Screening, prebreeding and recombination nursery are better made under sole cropping while varietal improvement and on-farm trials are conducted under the target multiple cropping systems. Breeding schemes may involve recurrent, pedigree and bulk hybrid selection. The given application concerns the genetic improvement of P. coccineus, P. polyanthus and interspecific hybrids of P. vulgaris for both simultaneous and relay intercropping in Colombia and Peru. Earliness, cold tolerance, resistance to fungus diseases (mainly Ascochyta leaf blight and anthracnosis) and seed yield potential were the major objectives of the bean improvement programme. Priority has been given to the exploitation of the large diversity available in the secondary gene pool of common bean. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic variability in tolerance to cadmium and accumulation of heavy metals in pea (Pisum sativum L.)

Ninety-nine wild growing and primitive varieties of garden pea (Pisum sativum L.) were screened for tolerance to cadmium (Cd) toxicity in quartz sand culture. Cadmium tolerance was determined by the time to plant death when treated with a lethal Cd concentration (13 mg kg^-1), and by a tolerance index (TI) calculated as a ratio between biomasses of Cd-treated and untreated plants in the presence of toxic Cd concentrations (7 mg kg^-1 and 5 mg kg^-1). The Cd-tolerance index varied significantly between pea genotypes from 35% to 90% and from 54% to 100% in the presence of 7 and5 mg Cd kg^-1, respectively. Shoot Cd concentration of tolerant and sensitive genotypes grown in the presence of 5 mg Cdkg^-1 varied between 35 mg Cd kg^-1and 135 mg Cd kg^-1 (dry weight) and was negatively correlated with TI. Certain tolerant pea genotypes were characterized by a high Cd concentration in shoots. All varieties were also screened for their ability to take up heavy metals (HMs) from a slightly contaminated soil. The concentration of Cd, chromium, copper, nickel, lead, strontium and zinc in plant shoots varied between pea genotypes by a factor of 2.8, 4.9, 2.7, 3.5, 9.7, 3.9 and 4.0, respectively. The coefficients of variation between pea genotypes for HM concentration were high, varying from 23%to 39% depending on the metal. The distribution patterns for varieties based on Cd tolerance (sand culture) and HM concentrations (soil culture) were characterised by positive skewness coefficients, suggesting that the majority of pea genotypes was relatively sensitive to Cd toxicity and tended to avoid excessive accumulation of HMs in shoots. These results show that a high genetic variability exists in pea with regards to Cd tolerance and HM accumulation. Concentrations of different HMs in plants grown in soil correlated positively with each other, with the exception of chromium. There was no correlation between Cd tolerance of the varieties in sand culture, shoot concentration of HMs in soil culture, biomass production, subspecies and geographical origin of the varieties. The genetic systems controlling Cd tolerance, HM accumulation and morphological traits are therefore independent to some extent, suggesting a possibility for breeding pea cultivars characterised by high tolerance to and low concentration of HMs in shoots. This revised version was published online in August 2006 with corrections to the Cover Date.     

Genetic progress of upland rice (Oryza sativa L.) lines for disease resistance

The rice crop is affected by diseases throughout its cycle, impacting negatively on grain yield and quality. The control of the disease impact can be accomplished via crop breeding, using highly multiple resistant genotypes. This study aimed to evaluate the efficiency of multiple-character and specific selection of multiple resistance to major culture-associated diseases (neck blast, leaf scald and grain discoloration) in rice lines of the Upland Rice Genetic Breeding Program. The experiments were conducted in 35 sites during 12 agricultural years, where 124 lines were evaluated for the severity of fungal diseases, under natural field conditions. Multiple parameters were calculated based on the diseases´ scores: genetic, phenotypic and environmental variances, heritability, selection gain, renewal rate, and genetic and renewal progress. Genetic variance for the disease resistance was identified in the population, and the selection gain for multiple-character selection was of 3.16 year⁻¹ throughout the breeding process with a renewal rate of over 35%. The programme has showed efficiency in selecting multiple resistant genotypes to the mentioned diseases, highlighting genotypes with high potential for market release.     

Analysis of the yield potential and yield components of F1 and F2 hybrids of crosses between wheat (Triticum aestivum L.) and spelt (Triticum spelta L.)

Summary Crosses of wild barley (Hordeum vulgare ssp. spontaneum and Hordeum vulgare ssp. agriocrithon) with Hordeum vulgare ssp. vulgare were used to select high yielding grain types under dryland Mediterranean conditions. No special difficulties were faced in making the crosses, in eliminating the brittle rachis genes from the grain types or in selecting 6-rowed types in crosses between 2-rowed wild barley and 6-rowed ssp. vulgare varieties. Brittle rachis genotypes, present in the segregating populations were used in developing self-reseeding permanent pastures for dry areas. The best selections were tested in seven trials during 1989–92 and some of them outyielded their parents and also the best improved check variety by 13–22%. Indications for transgressive segregation were obtained for grain yield, straw yield, total biological yield, harvest index and volume weight. The crude protein content of some of the selections was significantly higher than that of the checks. For breeding programs aiming at large seeds, special ssp. spontaneum lines should be used as parents. High grain yield was positively correlated with high straw yield, total biological yield, earliness in heading date, high harvest index and negatively with volume weight. It was concluded that unexploited useful genes, even when not directly observed in wild barley, could be transfered easily into high yielding genotypes by breeding.     

Intercropping and Poultry Manure Effects on Yields of Corn, Watermelon and Soybean Grown in a Calcareous Soil in the Jordan Valley

This study was conducted at the University of Jordan Research Station in the central Jordan Valley during 1988 and 1989 summer growing seasons, to determine the potential and response of summer crops to intercropping system and to poultry manure addition. Corn, soybean and watermelon were grown as sole crops and as intercrops in three paired combinations (corn: watermelon, corn: soybean, watermelon: soybean) with three levels of poultry manure (0, 20, 40 t/ha). The crop yields and land equivalent ratios (LERs) were determined for all treatments. The highest yields for the two cropping systems were obtained in response to the highest poultry manure addition. Corn gave the highest yield when intercropped with soybean, where increases in yield of 45 % and 66 % were obtained over those of corn sole crop at the same level of poultry manure (40 t/ha), in 1988 and 1989 seasons, respectively. Soybean gave the highest yield when grown with corn leading to an increase of 35 % and 34 % over soybean sole crop grown at the same level of poultry manure (40 t/ha) in 1988 and 1989, respectively. Watermelon gave the highest yield when grown with soybean, giving an increase which ranged from 390 to 920 kg ha⁻¹ over the yield of sole cropping system under the same level of poultry manure (40 t/ha). The LER values for all intercrop treatments were greater than 1.0 which gave clearly an indication for the superiority of the intercropping over the sole cropping system especially when 40 t ha⁻¹ poultry manure was added.     

Genetic interpretations of the effects of bulk breeding on four populations of beans (Phaseolus vulgaris L.)

Summary The effects of bulk breeding on yield and its components in two high-yeilding and two low-yielding bean populations when grown at crop densities are interpreted in terms of gene action and selection. There was considerable additive variation in the crosses, dominance effects were variable but tended to be negative. The results were compared with results obtained at low density by another worker with the same populations, and this showed that interpretations of gene action in hybrid vigour depend on the test environment used. The interpretations were also compared with plant breeding interpretations made on the same material (Hamblin, 1977), and it was found that a single pattern of response to natural selection, in plant breeding terms, may be explained by more than one genetic interpretation and, conversely, a single genetic interpretation may result in different patterns of response in plant breeding terms. The value of composite crosses in plant breeding are discussed and it is concluded that there is a greater chance of producing improved lines from a large number of simple crosses than from a smaller number of composite crosses.     

Polyploidy in tulips (Tulipa L.). The occurrence of diploid gametes

Summary From data available in the literature and supplemented by information from private tulip breeders, it appeared that triploid and tetraploid varieties raised in the past, resulted from crosses between diploid tulips and between diploids and tetraploids. This can only be explained by the occurrence of diploid gametes in diploid (2n=24) cultivars. This phenomenon which may affect both female and male gametes, appears to be specific for certain varieties. Consequences for practical breeding are discussed.     

Physico-chemical traits of Cajanus cajan (L.) Millsp. pod wall affecting Melanagromyza obtusa (Malloch) damage

Pigeonpea [Cajanus cajan (L.) Millsp.] is an important legume crop in the semi-arid tropics, and pod fly [Melanagromyza obtusa (Malloch)] is an important emerging constraint to increase the production and productivity of this crop under subsistence farming conditions. Host plant resistance can be used as an important tool for the management of this pest. Therefore, a set of ten pigeonpea genotypes from a diverse array of plant growth types and maturity groups including two appropriate commercial checks, was evaluated for resistance to pod fly under field conditions, and characterized for physico-chemical pod traits. The non-determinate type GP 75 (extra early maturing) and GP 118 (early maturing), and determinate type GP 233 (extra early maturing) and GP 253 (early maturing) genotypes had significantly lower pod and seed damage as compared to determinate (Prabhat) and non-determinate (Manak) early maturing checks, suggesting that resistance to pod fly is not linked to plant growth type and maturity period of the genotype in pigeonpea. Pod wall thickness, trichome density, reducing and non-reducing sugars, total phenols, tannins, and crude fiber were found to be negatively associated (r = −0.83** to −0.97**), while total protein positively associated (r = 0.88** to 0.97**) with pod fly infestation. Therefore, these traits particularly total phenols, tannins, crude fiber, trichome density, and pod wall thickness, can be used as physico-chemical markers to identify pigeonpea genotypes with resistance to M. obtusa, and use in pod fly resistant breeding program in pigeonpea.