Antifungal activity of liquid waste obtained from the detoxification of steam-exploded plant biomass against plant pathogenic fungi

The antifungal activity of steam-exploded liquid waste (SELW) produced by the detoxification of steam-exploded biomass of Miscanthus sinensis, Arundo donax and wheat straw for 2nd generation industrial bioethanol production was studied against plant pathogenic fungi for the first time. Quantification of fermentation inhibitors (2-furaldehyde, 5-hydroxymethylfurfural, acetic and formic acid) was carried out by standard methods. Mycelial growth inhibition and conidial germination of eight fungal strains [Alternaria alternata, Botrytis cinerea, Colletotrichum acutatum, Cladosporium fulvum, Fusarium oxysporum f. sp. lycopersici (FOL), F. oxysporum f. sp. melonis (FOM), F. solani f. sp. pisi and Verticillium dahliae] were evaluated in vitro at different dilution rates (1:2, 1:4 and 1:8) for each SELW. Disease suppressiveness was assessed in vivo in eight horticultural pathosystems (A. alternata/tomato, B. cinerea/tomato, C. acutatum/strawberry, C. fulvum/tomato, FOL/tomato, FOM/melon, F. solani f. sp. pisi/pea and V. dahliae/eggplant) under greenhouse conditions. Pathogen suppression by each SELW, applied both in spray form on to tomato leaves and skins of tomato and strawberry, and by means of dipping method in watering suspensions on to seedling root systems of tomato, melon, pea and eggplant, was evaluated at dilution rates of 1:2, 1:4 and 1:8 using irrigation water during curative and preventive treatments. Investigations carried out in vitro showed that M. sinensis SELW was more suppressive than wheat straw SELW, and A. donax SELW was less suppressive than wheat straw SELW at the lowest dilution rates. Relationships between the concentration of 2-furaldehyde, acetic and formic acid present in SELWs and their antifungal effect were found. Moreover, B. cinerea, C. fulvum, V. dahliae, A. alternata, C. acutatum and F. solani f. sp. pisi were more effectively inhibited than FOL and FOM. Investigations performed in vivo showed that SELWs of M. sinensis and wheat straw can be diluted at a 1:2 rate and used for controlling six fungal diseases during preventive treatments. In particular, they can be used by dipping of the root systems during transplanting in the case of F. solani f. sp. pisi/pea and V. dahliae/eggplant; on the other hand, they can be nebulized on to the leaves and fruits before symptoms appearance in the case of A. alternata/tomato, B. cinerea/tomato, C. acutatum/strawberry and C. fulvum/tomato. This study is of particular interest because it points out how these SELWs could be employed in horticultural crop protection in Southern Italy, thereby making it possible to effectively combine industrial production of 2nd generation biofuels with sustainable horticulture under greenhouse conditions.     

Disinfection using ozone microbubbles to inactivate Fusarium oxysporum f. sp. melonis and Pectobacterium carotovorum subsp. carotovorum

To establish a method for disinfecting hydroponic culture solutions using ozone microbubbles (OMB), we examined the disinfectant activity of OMB against Fusarium oxysporum f. sp. melonis and Pectobacterium carotovorum subsp. carotovorum in infected plant roots. OMB had a higher solubility and remained in the water for a longer period than ozone millibubbles, resulting in extremely high disinfecting activity against both phytopathogens. Furthermore, disinfectant activity and durability of OMB-treated water against both phytopathogens increased with an increase in the initial concentration of dissolved ozone. Therefore, these results suggest that OMB may be suitable for use as a new disinfectant against phytopathogens in hydroponic culture solutions.     

Effectiveness of plant extracts on suppression of damping-off and wilt diseases of lupine (Lupinus termis Forsik)

The aim of this study was to evaluate water and organic solvent of plant extracts for protection of lupine plants against damping-off and wilt diseases caused by Fusarium oxysporum f. sp. lupini, F. oxysporum f. sp. lupini Snyder & Hansen was isolated from diseased lupine roots collected from different locations of Minia, Assiut and New Valley governorates. Water leaf extracts of Calotropis procera, Nerium oleander, Eugenia jambolana, Citrullus colocynthis, Ambrosia maritime, Acacia nilotica and Ocimum basilicum and fruit extracts of C. colocynthis, C. procera and E. jambolana reduced damping-off and wilt diseases caused by F. oxysporum f. sp. lupini. Water extracts of E. jambolana leaves, C. colocynthis fruits and N. oleander leaves were the most effective ones for controlling such diseases. In contrast, A. nilotica and O. basilicum extracts were the least effective ones. Organic solvent extracts of tested plants reduced damping-off and wilt diseases than water extracts. Butanolic and ethereal extracts were highly effective in reduction of diseases than the other tested extracts. Under field conditions, during winter growing seasons 2008/09 and 2009/10, ethereal and butanolic extracts of N. oleander and E. jambolana leaves and C. colocynthis fruits significantly reduced the percentage of wilt severity as well as improved growth parameters (plant height, number of branches, pods and seeds per plant) and increased seed index, total seed yield/hectare compared with control treatment, while protein content in seeds was not effected. In conclusion, our study demonstrated that some plant extracts can be used for biocontrol of lupine damping-off and wilt diseases.     

Identification and antimicrobial activity of two alkaloids from traditional Chinese medicinal plant Tinospora capillipes

Two antimicrobial alkaloids, palmatine and jatrorrhizine, were isolated from tubers of traditional Chinese medicinal plant Tinospora capillipes using activity-guided isolation method and chromatography. Their antimicrobial activity was determined in vitro. The results showed that palmatine and jatrorrhizine had inhibitory activity against plant pathogens Colletotrichum gloeosporioides, Fusarium oxysporum f. sp. niveum, Mycosphaerella sentina, Pestalotia mangiferae, Cercospora kaki, Gymnosporangium haraeanum, Rhizoctonia solani and Colletotrichum graminicola, with the EC₅₀ values of 0.0348-0.8356 g L⁻¹ and 0.0240-0.8649 g L⁻¹, respectively. Palmatine and jatrorrhizine also exhibited inhibition against animal pathogens Bacillus cereus, Bacillus megaterium, Bacillus subtilis, Staphyloccocus aureus, Staphylococcus epidermidi, Micrococcus lysodeikticus, Proteus vulgaris, Salmonella typhi and Escherichia coli, with the MIC values of 0.1-0.8 g L⁻¹ and 0.1-0.6 g L⁻¹, respectively. These results suggested that palmatine and jatrorrhizine showed relatively broad spectrum antimicrobial activity against plant and animal pathogens.     

Activities of essential oils from Asarum heterotropoides var. mandshuricum against five phytopathogens

Some secondary metabolites of plants function as antimicrobial products against phytopathogens and constitute an increasingly important class of pesticides. In the present study, the essential oil of Asarum heterotropoides var. mandshuricum was analyzed by GC/MS and its antimicrobial activity was evaluated against five phytopathogenic fungi. Major components of the oil were methyleugenol (59.42%), eucarvone (24.10%), 5-allyl-1,2,3-trimethoxybenzene (5.72%), and 3,7,7-trimethylbicyclo(4.1.0)hept-3-ene (4.93%). The essential oil and the most abundant component, methyleugenol, were separately assayed for inhibition of 5 pathogens: Alternaria humicola, Colletotrichum gloeosporioides, Rhizoctonia solani, Phytophthora cactorum and Fusarium solani. Both the oil and methyleugenol strongly inhibited the growth of the test pathogens (IC₅₀ values <0.42 μg ml⁻¹) except F. solani, with the best activity against P. cactorum (IC₅₀ values = 0.073 and 0.052 μg ml⁻¹, respectively). It is concluded that the essential oil of A. heterotropoides var. mandshuricum has a broad antiphytopathogenic spectrum, and that methyleugenol is largely responsible for the bioactivity of the oil. The mode of action of methyleugenol against P. cactorum is discussed based on changes in the mycelial ultrastructure.     

Impact of long-term chemical fertilizer and organic amendment to Fusarium root rot of soybean

Soil suppressiveness to Fusarium root rot of soybean had been observed in a black soil field after a long-term fertilization with nitrogen (N) and phosphorus (P) fertilizer combined with pig manure as organic amendment (NPM), rather than that with only nitrogen and phosphorus fertilizer (NP) or no fertilizer (NF). To determine the microbial role on this suppressiveness, fungal and bacterial community characteristics in NPM, NP and NF treatments were investigated by qPCR and DGGE. Compared with the similar bacterial community characteristics among 3 treatments, fungal community, especially Fusarium population size and community composition in NPM treatment were different with those of NP and NF groups. Based on the isolation and pathogenicity test, pathogenic F. oxysporum, F. graminearum, F. verticillioide and F. lateritium absolutely dominated Fusarium community in NF and NP groups. Nonpathogenic F. avenaceum, F. equiseti, F. culmorum, F. redolens, F. solani and F. tricinctum dominated Fusarium community in NPM group. Isolation rate of pathogenic Fusarium in NPM reduced from 100% to 38% in NF. These results suggested that the dominance of soil non-pathogenic Fusarium population induced by organic amendment might play an important role on suppressing Fusarium root rot in the tested field.     

Differential expression of defence-related proteins in Vigna unguiculata (L. Walp.) seedlings after infection with Fusarium oxysporum

This work aimed to study the induction of defence proteins in cowpea seedlings during the first days after infection with the fungi Fusarium oxysporum f. sp. cubenses and F. oxysporum f. sp. phaseoli. Cowpea seeds, after disinfection, were transferred to Petri dishes containing 0.5% agar and, after germination, were infected with a drop of a suspension containing 0.5 × 10⁴ spores ml⁻¹. Seedlings were collected at 24, 48, 72 and 96 h after infection and were dissected into leaves, hypocotyls, roots, cotyledons and teguments, which were measured and weighed for morphometric analysis. The agar medium was also analyzed. Enzymatic assays of proteic extracts yielded antimicrobial peptides detected by Western blotting. The cowpea seedlings showed a complex pattern of induction and repression of defence proteins in response to infection by both pathogens. Furthermore, morphometric analysis showed differences between infected and control seedlings. Infected samples did not at any time exhibit chitinase activity, but did exhibit different β-1,3-glucanase and peroxidase activities. Western blotting for lipid transfer protein (LTP) demonstrated its presence in all parts of the infected seedlings. Exuded proteins, also obtained from cowpea seeds in the germination medium, were separated by SDS-PAGE and tricine gel electrophoresis. The analysis showed that some proteins were exuded from moistened cowpea seeds, particularly after F. oxysporum infection.     

Mycoparasitic Trichoderma viride as a biocontrol agent against Fusarium oxysporum f. sp. adzuki and Pythium arrhenomanes and as a growth promoter of soybean

Trichoderma viride was proved as an effective biocontrol agent against two fungal pathogens, Fusarium oxysporum f. sp. adzuki and Pythium arrhenomanes, infecting soybean. During an in vitro biocontrol test, Trichoderma showed mycoparasitism and destructive control against the tested fungal pathogens. Both the pathogens significantly influence the germination and P. arrhenomanes had a severe effect (only 5% germination). The root system of the soybean plant was poorly developed due to the infection and it exerted a negative influence on the nodulation and further growth phases of the plant. During pot assay along with biocontrol activity, Trichoderma showed growth promoting action on the soybean plant. Trichoderma enhanced growth of shoot and root systems and fruit yield after 12 weeks of growth. Pythium and Fusarium infected plants treated with Trichoderma had ∼194% and 141% more height than pathogens alone. The fruit yield treated with Trichoderma was ∼66 per plant whereas the yield was only 41 for a control plant. The plants infected with Pythium and Fusarium and treated with Trichoderma had fruit yields of 43 and 53 respectively and those were 5 and 1.6 times higher than plants infected with pathogens.     

Integrated management of Fusarium and Verticillum wilts of cotton in China

Fusarium and Verticillium wilts of cotton, which are widely distributed, generally occur concurrently and cause serious losses in cotton production in China. A general survey in 1982 showed that about 16% of Chinese cotton-growing regions were infested and could be demarcated into heavily, moderately and lightly infested regions. The estimated annual loss was about 100 000 tons of lint cotton. The tactics used for integrated management have been developed. Three biotypes of Fusarium oxysporum f. sp. vasinfectum have been identified. Different virulent strains have been found in both F. oxysporum f. sp. vasinfectum and Verticillium dahliae in different regions. Since 1951, 47 Fusarium-wilt-resistant and Verticillium-tolerant cultivars have been developed and grown in heavily infested regions. About 50% of the potential loss from cotton wilt diseases is saved annually. By using an organic solvent infusion (OSI) technique, fungicides such as carbendazim or ethylethene thiosulphonate can easily penetrate into dormant seeds; thus, a better disinfection of internal seed-borne pathogens is obtained. Seed coating treatment with a combined formulation of the systemic fungicides carbendazim and quintozene and the insecticide carbofuran provides a good integrated control of seed- and soil-borne diseases as well as of cotton aphids, thrips and soil insects at the seedling stage. More plant growth and yield of lint cotton have been obtained in comparison with the untreated control in field tests.     

Evaluation of the short term effect of nursery treatments with phosphite-based products,acibenzolar-S-methyl,pelleted Brassica carinata and biocontrol agents,against lettuce and cultivated rocket fusarium wilt under artificial inoculation and greenhouse conditions

Experimental trials have been carried out in order to evaluate the efficacy of preventative treatments based on plant defense activator products, biocontrol agents, a microbial complex with arbuscular mycorrhizal fungi, and Brassica carinata pellets against Fusarium oxysporum f. sp. lactucae race 1 on lettuce and Fusarium oxysporum f. sp. raphani on cultivated rocket under greenhouse conditions. These products were compared with fungicides known for their ability to induce host resistance (phosethyl-Al and acibenzolar-S-methyl), and with azoxystrobin. Three and four applications of the tested products were carried out on lettuce and rocket seedlings grown in nursery conditions. Treated and untreated plants were transplanted into soil infested with Fusarium wilt agents to obtain an average disease severity (DS) of 65.6–69.2 and of 56.9–62.1 on the untreated lettuce and rocket plants, respectively. The best Fusarium wilt biocontrol was obtained after four applications of Bacillus subtilis Qst713 and with the Glomas microbial complex (42 and 46.7%, efficacy, respectively). B. carinata pellets provided a consistent control when applied 14 days before the rocket and lettuce were transplanted into the infested soil. Acibenzolar-S-methyl, applied at 0.025 g/Liter, showed a DS reduction in F. oxysporum f. sp. lactucae from 36 to 61% and of F. oxysporum f. sp. raphani from 54 to 73%, thus showing statistically similar results to those of azoxystrobin, which was used as a reference (DS reduction from 59 to 65%). Although the Fusarium wilt control provided by such products was not complete in the present experimental conditions, these products can be considered interesting components for an integrated pest management of the Fusarium wilt of leafy vegetables, starting from nursey applications. Moreover, the tested BCAs could become potentially useful, especially for plant monocultures. This study has been produced new information on the effects of potassium phosphite, applied at the nursery level, on reducing lettuce and rocket fusarium wilt. An average efficacy of 69.5% was observed for lettuce, while an average efficacy of 65.2% was observed for cultivated rocket. The good fungicidal activity of the phosphite-based product, coupled with the positive effect on plant biomass, is of special interest.     

Management of fusarium basal rot (Fusarium oxysporum f. sp. cepae) on shallot through fungicidal bulb treatment

Fusarium basal rot caused by Fusarium oxysporum f.sp. cepae is an economic disease of shallot. Field experiments were conducted at Debre Zeit during 2006 and 2007 cropping seasons to determine effective fungicides and their method of application for the management of fusarium basal rot of shallot. The field was naturally infested with F. oxysporum f. sp. cepae and treatments were arranged in randomized complete block design in four replications. Five fungicides, Mirage 50 WP, Folicur 25 EC, Seed plus 30 WS, Penncozeb 80 WP and Ridomil Gold 68 WG were evaluated as seed bulb dressing and bulb dip treatments against basal rot in the field and storage. Bulb dressing with Mirage, and dip treatment in Seed plus reduced the disease incidence by 40% and 43%, respectively over control. These fungicides also resulted in a significant reduction in severity, basal rot affected cull bulbs on shallot. Bulb rot during three months of storage on concrete ground floor and on wire mesh shelves was also reduced by seed bulb treatment over control. The highest increase in yield was obtained from bulb dressing with Mirage (42%) and Seed plus (45%) and from bulb dip treatment in Seed plus (44%) over control. Fusarium basal rot caused 45% loss in yield and 12-30% of bulb loss in the storage. The study showed that basal rot of shallot can be managed effectively by seed bulb dressing or dip treatment in Mirage or Seed plus.     

Biocontrol of Rhizoctonia solani and Sclerotium rolfsii on tomato by delivering antagonistic bacteria through a drip irrigation system

In a 2-year assessment carried out on tomato crops of Central and Southern Italy, a high incidence of Rhizoctonia solani and Sclerotium rolfsii was found. These fungal pathogens attack horticultural crops and are responsible for severe crown and stem rot. Because of technical, economical and environmental issues their chemical control is an arduous task. To find alternative and eco-compatible control methods, the effectiveness of two new antagonistic bacterial isolates (Burkholderia cepacia, T1A-2B, and Pseudomonas sp., T4B-2A), previously selected from suppressive organic amendments, were tested on tomato plants grown under both growth chamber and field conditions. The potential antagonists were compared with two commercial biofungicides, based on Bacillus subtilis (BSF4) and Trichoderma asperellum (TV1), and four synthetic fungicides (tolclofos-methyl, azoxystrobin, fosetyl-Al and fosetyl-Al + propamocarb). In 2-year field experiments carried out on tomato plants, the biocontrol bacteria as well as the other treatments were applied to the soil, proximal to the plant crowns and main roots, by means of an effective and specific system of drip irrigation. In all the experiments the novel selected biocontrol bacteria significantly reduced both incidence and severity of the diseases caused by S. rolfsii or R. solani, with results demonstrating effectiveness equal to TV1, better than BSF4 and comparable with the synthetic fungicides, except for tolclofos-methyl which was the most effective treatment. In field experiments, carried out for two consecutive years, isolate T1A-2B reduced up to 58.33% and up to 63.8% the severity of the diseases caused by S. rolfsii and R. solani respectively; whereas isolate T4B-2A gave reduction of S. rolfsii and R. solani diseases severity up to 73.2% and up to 62.7%, respectively.     

Evaluating novel microbe amended composts as biocontrol agents in tomato

An investigation was conducted to evaluate the potential of antagonistic cyanobacteria/bacterial cultures amended compost and compost tea preparations for suppressing diseases caused by plant pathogenic fungi Fusarium oxysporum, Pythium debaryanum, Pythium aphanidermatum and Rhizoctonia solani in tomato. Two types of microbe-fortified composts and the compost tea preparations, along with the recommended biological control (Trichoderma formulation) and chemical control (Thiram-Carbendazim), were used for inoculating the potting mixture. Comparative performance of the treatments revealed the superiority of both the composts/compost tea preparations in enhancing seed germination, seedling length and biomass in the fungi challenged treatments. The most effective control of the diseases was obtained by the composts amended with Anabaena oscillarioides C12 and Bacillus subtillis B5 and the compost tea preparations. Both treatments provided significantly better control than the other treatments in terms of reduction in disease severity, reduction of fungal load and enhancement of plant parameters. Our study reveals the efficacy of microbe-fortified composts for use in control of the studied root diseases caused by phytopathogenic fungi.     

Control of Fusarium wilt of carnation using organic amendments combined with soil solarization,and report of associated Fusarium species in southern Spain

Fusarium wilt is a disease that restricts carnation (Dianthus caryophyllus L.) yield worldwide. Efficacies in reducing the Fusarium wilt of carnation (FWC), of various types of organic amendments (fresh or pelletized poultry manure, pelletized Brassica carinata and olive residue compost) combined with soil solarization, were compared in two biennial field trials conducted in a greenhouse with a history of carnation monoculture over 8 years. Soil treatments combining organic amendments and soil solarization significantly reduced disease incidence (86–99%) and increased the number of commercial carnation stems by 5–9 times compared to non-treated plots. Twenty-one Fusarium spp. isolates, with different colony morphologies were recovered from soil samples taken in the greenhouse, before the application of treatments in June 2013. Nineteen of them were morphological and molecularly characterized. Additionally, two pathogenicity tests with 17 isolates recovered from greenhouse soils and two isolates recovered from organic amendments were performed. Fusarium species associated with carnation cultivation were identified as Fusarium oxysporum (43%), Fusarium proliferatum (24%), and Fusarium solani (33%). The phylogenetic analysis of the translation elongation factor 1 alpha (EF-1α) region distinguished highly aggressive isolates of F. oxysporum f. sp. dianthi, from low aggressive isolates. The pathogenicity tests showed that FWC has a complex etiology, with several Fusarium spp. identified as causal agents. F. proliferatum and F. solani are associated with carnation wilt for the first time in Spain.     

Evaluation of actinomycete isolates obtained from herbal vermicompost for the biological control of Fusarium wilt of chickpea

A total of 137 actinomycetes cultures, isolated from 25 different herbal vermicomposts, were characterized for their antagonistic potential against Fusarium oxysporum f. sp. ciceri (FOC) by dual-culture assay. Of the isolates, five most promising FOC antagonistic isolates (CAI-24, CAI-121, CAI-127, KAI-32 and KAI-90) were characterized for the production of siderophore, cellulase, protease, hydrocyanic acid (HCN), indole acetic acid (IAA) and antagonistic potential against Rhizoctonia bataticola, which causes dry root rot in chickpea (three strains viz. RB-6, RB-24 and RB-115) and sorghum (one strain). All of the five FOC antagonistic isolates produced siderophore and HCN, four of them (except KAI-90) produced IAA, KAI-32 and KAI-90 produced cellulase and CAI-24 and CAI-127 produced protease. In the dual-culture assay, three of the isolates, CAI-24, KAI-32 and KAI-90, also inhibited all three strains of R. bataticola in chickpea, while two of them (KAI-32 and KAI-90) inhibited the tested strain in sorghum. When the FOC antagonistic isolates were evaluated further for their antagonistic potential in the greenhouse and wilt-sick field conditions on chickpea, 45-76% and 4-19% reduction of disease incidence were observed, respectively compared to the control. The sequences of 16S rDNA gene of the isolates CAI-24, CAI-121, CAI-127, KAI-32 and KAI-90 were matched with Streptomyces tsusimaensis, Streptomyces caviscabies, Streptomyces setonii, Streptomyces africanus and an identified species of Streptomyces, respectively using the BLAST searching. This study indicated that the selected actinomycete isolates have the potential for biological control of Fusarium wilt disease in chickpea.     

Occurrence and characterization of fungi and oomycetes transmitted via potting mixtures and organic manures

A study was conducted to investigate the most common fungal and oomycete pathogens introduced into farms in Oman via potting mixtures and organic manures. A total of 37 commercial types of potting mixtures (2 local and 35 imported from overseas), 4 commercial types of organic manures and 11 non-commercial types of organic manures were included in the study. Identification of the isolated species was based on morphological characteristics, except for the most common species which were further identified using sequences of the internal transcribed spacer region of the ribosomal DNA (ITS rDNA). Fusarium spp. (14%), Pythium aphanidermatum (3%), Alternaria spp. (5%), Helminthosporium spp. (5%) and Cladosporium spp. (3%) were recovered at different frequencies from samples of potting mixtures. Fusarium solani (40%) and Fusarium equiseti (47%) were recovered at high frequencies from samples of organic manures. Isolations from organic manures also yielded Pythium periplocum (7%), Rhizoctonia solani (7%), Fusarium lichenicola (7%), Helminthosporium spp. (27%) and Alternaria spp. (27%). Trichoderma spp., Penicillium spp., Aspergillus spp. and Rhizopus spp. were found to be common in samples of potting mixtures and organic manures. Investigating sensitivity to hymexazol among 9 isolates of F. equiseti and 13 isolates of F. solani revealed variations among different isolates. The EC₅₀ values ranged from 1 to over 1200 (avg. 192 μg ml⁻¹) for F. equiseti isolates and from 135 to 789 (avg. 324 μg ml⁻¹) for F. solani isolates, indicating presence of resistance to this important fungicide among some Fusarium isolates. This appears to be the first report of contamination with R. solani, P. periplocum, F. solani, F. equiseti and F. lichenicola of organic manures. This study appears to report for the first time F. lichenicola in Oman and appears to be the first report of occurrence of resistance to hymexazol among F. equiseti and F. solani isolates.     

Evaluations of shallot genotypes for resistance against fusarium basal rot (Fusarium oxysporum f. sp. cepae) disease

Fusarium basal rot (FBR) caused by Fusarium oxysporum f. sp. cepae (Foc) is one of the most significant production constraint to shallot. Field experiment was conducted in a naturally Foc infested soil at Debre Zeit Agricultural Research Center during 2006 and 2007 cropping seasons to evaluate the level of resistance of sixteen shallot genotypes against FBR disease. Treatments were arranged in randomized complete block design with four replications. The genotypes significantly varied in their susceptibility to FBR and yield. They were grouped into tolerant, moderately and highly susceptible types. Five genotypes (DZ-Sht-168-1A, DZ-Sht-157-1B, Huruta, Negelle and DZ-Sht-169-1b) were identified to be tolerant as they had reduced disease severity levels from 26.8 to 32.5% and increased mean yield by more than 5 t ha⁻¹ compared to highly susceptible genotypes (DZ-Sht-076-4, DZ-Sht-201-1C and DZ-Sht-054-3A). Among the tolerant genotypes, DZ-Sht-169-1b had greatly reduced bulb rot incidence by 48% in ground storage and 30% in wire mesh shelf as compared to highly susceptible genotype DZ-Sht-201-1C. The tolerant genotypes have high yielding characteristic, and farmers could adopt them for cultivation where FBR is a problem.     

Screening of plant growth promoting rhizobacteria as potential microbial inoculants

Plant growth promoting bacteria can enhance and promote plant growth and development in different ways. These mechanisms include solubilization of phosphorus, nitrogen fixation and biocontrolling effects on phytopathogenic microorganisms. Suppression of phytopathogenic fungi by 47 different bacteria, isolated from different monocotyledonic plants rhizosphere and soil, was tested against Fusarium oxysporum radicis-lycopersici, Sclerotium bataticola, Pythium ultimum, Fusarium graminearum, and Alternaria spp. The antifungal activity of these isolates was described based on the comparison of the growth rate inhibition. As the production of iron-chelating compounds is one of the mechanisms responsible for the antimycotic effect, we tested the siderophore producing capacity of the isolated strains. Also, we assayed the ammonia production of these bacteria. This secondary metabolite compound contributes to the biocontrolling property of these bacteria. Our examinations also include the inorganic phosphate solubilization capacity of these isolates, which may improve the phosphorus uptake of plants. The results indicate that 17 bacterial isolates are able to produce siderophores and 30 from them possess capacity of calcium-phosphate mobilization. The majority of the cultures were found to have highly inhibitory effects against the mycelium growth of P. ultimum, F. oxysporum radicis-lycopersici and F. graminearum, whereas others showed little activity. Only twelve bacteria showed no activity against the S. bataticola plant pathogen fungus.     

Control of Rhizoctonia solani fruit rot of tomatoes by Trichoderma harzianum Rifai

Application of Trichoderma harzianum, to soil or by coating tomato fruits, reduced Rhizoctonia solani fruit rot by up to 43% and 85%, respectively, under laboratory conditions. When mixed with naturally infested soil, Trichoderma reduced R. solani inoculum potential by 86% in field trials. It also significantly reduced fruit rot by 27–51%.     

Combining residues of herb crops with soil heating for control of soilborne pathogens in a controlled laboratory system

Plant residues from herb crops were examined as organic amendments for the control of soilborne pathogens with and without soil heating for a short exposure of 2 weeks. Residues of herbaceous plants of oregano, sage, rosemary, tarragon, bay, wild rocket, spearmint and thyme were incubated for 14 days in a controlled laboratory system which emulates soil solarization. Green cabbage residues were included for comparison. The tested pathogens included Fusarium oxysporum f. sp. radicis-lycopersici, Macrophomina phaseolina, Rhizoctonia solani and Meloidogyne javanica. Heating soil amended with herb residues, particularly tarragon, spearmint and wild rocket, resulted in high mortality of the tested pathogens. Volatile compounds which were generated in heated soils amended with wild rocket or tarragon showed significant toxicity to M. phaseolina and R. solani. Only oregano, thyme, bay, wild rocket and tarragon amendments were effective in pathogen control without heating. Incorporation of leaf and stem residues of thyme, sage, tarragon, rosemary or wild rocket in soil and exposure to solarization under field conditions resulted in 95-100% mortality of the tested pathogen. This study demonstrates that the residues from herb crop production can serve as organic amendments for the control of soilborne pathogens, especially when combined with heating or solarization.