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1.
DNA was extracted from wood samples of six representativeCyclobalanopsis species (Fagaceae) growing in Japan that cannot be distinguished from one another by conventional microscopy. A part of the intergenic spacer region betweentrnT andtrnT 5 exon was amplified and sequenced. The sequences obtained from wood samples were grouped into three DNA types by a single nucleotide polymorphism as reported previously in leaf samples: I (Quercus acuta, Q. sessilifolia, Q. salicina), II (Q. myrsinaefolia, Q. glauca), and III (Q. gilva). Thus,Q. gilva can be distinguished from the otherQuercus species, and the others are separated in two subgroups based on DNA polymorphism. The present findings support the possibility of wood identification based on DNA polymorphism.  相似文献   

2.
DNA sequences of the chloroplast spacer region between thetrnP andtrnW genes (234 bps) were determined for two Japanese fir species,Abies firma Sieb. et Zucc. andA. homolepis Sieb. et Zucc., using four individuals from each species. No intraspecific variation was found in either species, but interspecific sequence polymorphism was detected between the two species. The interspecific variation was three nucleotide changes, from the 148th to 150th nucleotide position. These three nucleotides were TAC inA. firma and GTA inA. homolepis, which were inverted. In order to identify the cpDNA haplotypes between the two species, this inversion polymorphism was utilized to develop a new marker. Species-specific primers were designed so that the 3′ ends of the primers would anneal to the mutation site, in order for the two haplotypes to be easily identified by a polymerase chain reaction (PCR).  相似文献   

3.
Phylogenetic relationships ofArundinaria and related genera (Pleioblastus, Pseudosasa, Oligostachyum, Bashania, Clavinodum, etc.) were assessed by analyzing the sequences of the nrDNA internal transcribed spacer (ITS) and the cpDNAtrnL-F intergenic spacer (IGS). Comparison withtrnL-F IGS sequence, the ITS region provided the higher number of parsimony informative characters, and the interspecific variation of the ITS sequence was higher than that of thetrnL-FIGS sequence. The tree obtained by combining both sets of data showed that the species sampled inArundinaria and the related genera were monophyletic and divided into two clades. The relationships and positioning of all the taxa surveryed (includingA. oleosa, A. hsienchuensis, A. chino, A. amara, A. yixingensis, A. amabilis, A. fortunei, A. pygmaea, A. gramineus, A. fargesii, A. faberi, A. hupehense, Pseudosasa japonica cv. Tsutsumiana, P. japonica andBrachystachyum densiflorum) were also discussed. The results from the sequences were broadly consistent with morphological characters, appearing all these taxa sampled belong to the genus ofArundinaria. The topologies of the trees generated from individual data and the combined data were similar. Foundation item: This study was supported by National Natural Science Foundation of China (No. 30170788) Biography: ZHUGE Qiang (1959-), male, professor in Laboratory of Forest Genetics and Gene Engineering, Nanjing Forestry University, Nanjing 210037, P.R. China. Responsible editor: Song Funan  相似文献   

4.
In order to examine whether seedlings of non-native genetic lineages had been planted, we compared chloroplast DNA haplotypes in plantations and neighboring natural populations of Fagus crenata in Nagano Prefecture, Japan. This region was chosen for study because there are abundant natural F. crenata populations with different haplotypes, and because the species is also frequently used for afforestation in the area. We sampled 159 trees from 30 populations of the species across most of its natural range in the region, and 136 trees from 20 plantations of the species, ranging in age from 3 to 17 years. Six single nucleotide polymorphisms and four insertions/deletions in two chloroplast DNA regions (trnL–trnF and trnK) were analyzed in each of the sampled individuals in order to determine their haplotypes. Four haplotypes (B, D, E and F) were detected in the natural populations, and these exhibited a clear geographical structure; in contrast, only two haplotypes (A and B) were found in the plantations. We found that 15 out of the 20 plantations—located in central and southern areas on the Pacific side of Honshu, where the natural populations contain haplotypes D, E, and F, and where the climate is characterized by dry, cold winters—had been established using seedlings with haplotypes A and B derived from the Sea of Japan side of the Japanese Islands, where it snows heavily. The risks associated with planting seedlings of inappropriate lineages are discussed.  相似文献   

5.
[目的]筛选出高变异率的叶绿体DNA序列,以进行血皮槭天然群体的谱系地理学研究。[方法]以血皮槭16个天然群体为试材,对叶绿体基因组20个非编码区序列进行测序研究,并利用筛选出的高变异率cpDNA序列初步分析了其遗传变异。[结果]序列比对和系统发育分析结果显示血皮槭cpDNA种内变异非常低,9个cpDNA序列检测到不同程度的变异位点,其中只有4个序列psbJ-petA、ndhF-rpl32、trnD-trnT和trnH-psbA表现出较高的变异水平。[结论]筛选出的4个高变异率cpDNA序列,可以在分子水平上研究血皮槭种内的系统发育、遗传变异和种群历史动态,为进一步研究濒危种血皮槭的分子谱系地理学奠定基础。  相似文献   

6.
To clarify the differences in susceptibility of six species in the Fagaceae (Quercus crispula, Quercus serrata, Quercus acutissima, Quercus phillyraeoides, Quercus glauca, and Castanopsis cuspidata var. sieboldii) to Raffaelea quercivora, we inoculated this fungus on seven potted 5-year-old seedlings of each species, observed symptom development, and measured xylem pressure potential (XPP) after inoculation. The first death was observed on the 11th day in Q. crispula and on the 56th day in Q. serrata. The number of dead seedlings of Q. crispula and Q. serrata were five and one, respectively, whereas no mortality was observed in the other four species. The XPP of inoculated seedlings in both Q. crispula and Q. serrata decreased after inoculation. In contrast, the XPP of inoculated seedlings of the other four species remained almost the same as in the control seedlings. These results indicate that R. quercivora is pathogenic to Q. crispula and Q. serrata and that the susceptibility of the six Fagaceae species in our study differed among species.  相似文献   

7.
The mode of chloroplast inheritance was investigated in the four Australian conifer species; Callitris columellaris, C. intratropica, C. gracilis and C. verrucosa (Callitroideae, Cupressaceae), as a basis for future use of chloroplast genetic markers for the genus. Open-pollinated seeds and the foliage tissue of the mother trees were collected from one population per species, in which two distinct chloroplast haplotypes at the trnL (UAA) 5′ exon–trnF (GAA) region were co-distributed. In total, the DNA sequences of the chloroplast fragments in 255 samples were determined, and the haplotypes of the germinated seedlings and the mother trees were compared. Among the 16 mother trees examined across all species, 12 trees were shown to have produced at least one offspring with a different haplotype from the mother, indicating the occurrence of paternal inheritance of chloroplast in the fertilization processes. In binomial GLMM analyses, the haplotype of mother trees in C. columellaris, C. gracilis, and C. verrucosa did not significantly affect those of their offspring, and the predicted frequency of seedlings’ haplotypes was compatible with the observed frequency in adult canopy trees. These findings provide a genetic support that paternal inheritance of chloroplast DNA via pollen dispersal would be dominant in the Callitris species.  相似文献   

8.
Attempts to design species‐specific PCR primers from six European Armillaria species in the ribosomal RNA genes are reported. Primers were developed on the basis of the nucleotide sequence variability of the internal transcribed spacers (ITS) and the intergenic spacer (IGS1) of the ribosomal DNA. Four sets of primers gave specific PCR products for Armillaria tabescens, Armillaria mellea and Armillaria ostoyae. However, due to the high sequence similarities between Armillaria borealis and Armillaria ostoyae and between Armillaria cepistipes and Armillaria gallica no species specific amplification was obtained for these taxa.  相似文献   

9.
To determine the phylogenetic positions of two new species, Armillaria jezoensis and Armillaria singula, and one new subspecies, Armillaria mellea suhsp. nipponica, the nucleotide sequences of the intergenic spacers (IGS) of their ribosomal DNA were investigated, and compared with those of tour other Armillaria species from Japan, and those of nine Armillaria species from Europe and North America. We conclude that Armillaria jezoensis, and Armillaria singula belong to the Armillaria gallica cluster as Armillaria cepistipes, Armillaria gallica and Armillaria sinapina from Japan. Two isolates of Armillaria ostoyae from Japan were placed within the Armillaria ostoyae cluster. Armillaria mellea subsp. nipponica had an IGS sequence as long as the IGS of Armillaria mellea from Europe and North America. However, the IGS sequences of Armillaria mellea subsp. nipponica, whose basidium base lacks a clamp connection could not be satisfactorily aligned with the IGS sequences of other species possessing this morphological feature.  相似文献   

10.

Native Danish oak stands are fragmented and decreasing because of the extensive use of foreign seed sources. Therefore, the population structure of natural Danish oak stands was analysed by means of six polymorphic enzyme loci. A total of 17 stands of Quercus robur L. (including an ''outgroup'' sample from The Netherlands), seven Quercus petraea [Matt.] Liebl. and two putative hybrid stands were included in the study. The average genetic diversity was similar for the two species as well as for the putative hybrid stands: 0.25 for Q. robur, 0.27 for Q. petraea and 0.26 for the hybrid stands. The genotypic proportions at two (Pgm and Mnr) of the six loci showed many significant deviations from Hardy-Weinberg expectations, always with an excess of homozygotes, whereas the remaining four loci accorded to Hardy-Weinberg proportions, suggesting a low level of inbreeding. The differentiation of the Q. petraea and Q. robur populations was quantified with Wright's F-statistics. The within-species component was low, 0.022, reflecting the wind-pollinated reproductive mode of the two species. The betweenspecies component was 10-fold higher, 0.235, indicating two separate groups. A phylogenetic tree estimated from allele frequencies also supported the presence of these two groups. Despite the two well-separated groups in the tree, it was not possible to assign all individuals to the species to which they supposedly belonged. In total, 10% of the Q. robur individuals and 14% of the Q. petraea individuals were assigned to the other species, suggesting a limited amount of introgression between the two species.  相似文献   

11.
In order to understand the relationship between population succession and its genetic behavior, random amplified polymorphic DNA (RAPD) technique was used to analyze the genetic diversity of Quercu glandulifera var. brevipetiolata populations in three forest communities with different succession stages (coniferous forest, coniferous and broad-leaved mixed forest, evergreen broad-leaved forest). The results showed that 145 repetitive loci were produced in 60 individuals of Q. glandulifera using 11 primers, among which 120 loci were polymorphic, and the total percentage of polymorphic loci was 82.76% with an average of 64.14%. Estimated by the Shannon information index, the total genetic diversity of the three populations was 0.4747, with an average of 0.3642, while it was 0.3234, with an average of 0.2484, judged from the Nei index. Judged from percentage of polymorphic loci, Shannon inform at ion index and Nei index, the genetic diversity followed a decreasing order: coniferous forest > broad-leaved mixed forest > evergreen broad-leaved forest. Analysis of molecular variance (AMOVA) showed that 69.73% of the genetic variance existed within populations and 30.27% of the genetic variance existed among populations. The coefficient of gene differentiation (GST) was 0.2319 and the gene flow (N m) was 1.6539. The mean of genetic identity among populations of Q. glandulifera was 0.8501 and the mean of genetic distance was 0.1626. The genetic identity between the Q. glandulifera population in the coniferous forest and that in the coniferous and broadleaved mixed forest was the highest. UPGMA cluster analysis based on Nei’s genetic distance showed that the population in the coniferous forest gathered with that in the coniferous and broad-leaved mixed forest firstly, then with that in the evergreen broad-leaved forest. The genetic structure of Q. glandulifera was not only characteristic of the biological characteristics of this species, but was also influenced by the microenvironment in different communities. __________ Translated from Journal of Northwest Forestry University, 2008, 23(1): 18–22 [译自: 西北林学院学报]  相似文献   

12.
Ocamb  C.M.  Juzwik  J.  Martin  F.B. 《New Forests》2002,24(1):67-79
Eastern white pine (Pinus strobus L.) seeds weresown in soil infested with Fusarium proliferatum, rootnecrosis developed on seedling roots, and F. proliferatumwas reisolated from symptomatic roots; thus, demonstrating thatF. proliferatum is pathogenic toeastern white pine seedlings. Soils infested with F.acuminatum or F. sporotrichioides resulted infew diseased seedlings. Seedlings with root rot generally showed reductions inseedling height. All Fusarium species tested wererecoveredfrom rhizosphere soil samples. Three seedlots of Pinusstrobus were examined for Fusarium infestation.Fusarium species were recovered from most seeds in twoseedlots. Fusarium proliferatum and F.sporotrichioides were the predominant species isolated. Additionalspecies not previously reported from P. strobus included:F. acuminatum, F. chlamydosporum,F. equiseti, F. graminearum,F. moniliforme, F. poae, F.polyphialidicum, F. heterosporum, F.sambucinum, and F. semitectum.  相似文献   

13.
国内外无患子属种质资源研究进展   总被引:1,自引:0,他引:1  
无患子属(Sapindus L.)种质资源是无患子产业发展的基础,种质资源研究可为探讨无患子属的起源、进化、分类、资源保护与利用、良种选育、高效栽培等提供科学依据和基础。文中综述了国内外无患子属分类、分布及亲缘关系,种质资源的收集、保存与评价,种质资源多样性等方面的研究进展,得出如下结论:1)世界上无患子属树种共13种,我国分布4种1变种;2)我国多个研究团队收集、保存无患子属种质资源近1 000份,以假种皮皂苷、种子脂肪酸利用为目标,筛选评价出性状优异的9个种源、7个家系和54株优树;3)无患子种质资源在表型、假种皮皂苷、种子脂肪酸、遗传等方面多样性丰富,并受环境因子极大的影响,根据遗传多样性分析推测我国无患子起源于自然分布区中部并向四周扩散。研究认为,目前研究仍存在种质资源收集不足、缺乏对该属树种系统研究和无优良品种推出等亟待解决的问题,提出应加强无患子属分子生物学基础研究、以居群为单位加强无患子属种质资源收集和评价力度、加强良种选育和高效培育技术以及国际合作研究等建议,以期为无患子产业可持续发展提供有力支撑,促进无患子属种质资源的开发利用。  相似文献   

14.
The survival and growth of Quercus germana Schltdl. & Cham., Q. xalapensis Humb. & Bonpl. and Magnolia dealbata Zucc. was evaluated in three treatments: (1) under the canopy of Pinus maximinoi H.E. Moore; (2) under the canopy of Liquidambar macrophylla Oersted, and (3) in open areas. The following hypothesis was presented: P. maximinoi and L. macrophylla canopy facilitate the establishment of Quercus germana, Q. xalapensis, and Magnolia dealbata. After one year, the survival of seedlings and the growth rate in height and basal diameter were significantly different between treatments and species (p < 0.05). The results suggest a facilitation establishment of Magnolia dealbata under the canopy of Pinus and Liquidambar, whereas the tolerance was observed for Quercus germana and Q. xalapensis. The results will allow to identify restoration strategies of the mountain cloud forest in Mexico.Resumen. Se evaluó la supervivencia y crecimiento de Quercus germana, Q. xalapensis y Magnolia dealbata, en tres tratamientos; (1) bajo el dosel de Pinus maximinoi, (2) bajo el dosel de Liquidambar macrophylla y (3) en áreas abiertas. La hipótesis planteada fue; la cobertura de P. maximinoi y L. macrophylla facilitan el establecimiento de Quercus germana, Q. xalapensis y Magnolia dealbata. Después de un año, la sobrevivencia de plántulas, y las tasas de crecimiento en altura y diámetro de la base, fueron significativamente diferentes entre tratamientos y especies (p < 0.05). Los resultados sugieren que el establecimiento de Magnolia dealbata es facilitado bajo el dosel de Pinus y Liquidambar, mientras que para Quercus germana y Q. xalapensis se observó tolerancia. Los resultados permitirán identificar estrategias de rehabilitación del bosque mesófilo de montaña en México.  相似文献   

15.
The genetic diversity of Bemisia tabaci was investigated in Southern Italy using the mitochondrial cytochrome oxidase I (COI) gene as molecular marker and sampling whiteflies on cultivated plants, weeds and bushes. Phylogenetic analysis of COI sequences and restriction analysis of COI amplicons were used to genotype whitefly populations. A PCR-RFLP method based on digestion with the endonuclease ApoI was set up to identify the B. tabaci genetic variants so far recorded from the Mediterranean region. In general, biotype Q populations were most frequently collected (76.0% of all sampled populations). In greenhouse districts, 87.0% sampled populations were identified as biotype Q, and 13.0% were assigned to biotype B. Outside the greenhouse districts, the biotype B was never collected, whilst biotype Q populations were found on weeds and on plants cultivated in family gardens in different environments, also located in interior plains or in mountain areas distant from intensive cultivations of whitefly host plants. A new genetic variant unrelated to B and Q biotypes, which was named Ru, was collected on Rubus ulmifolius and grapevine. Phylogenetic analysis of COI sequences shown that Ru haplotypes form a well-supported clade sister to the clade including the Asian/Australian major genetic groups and the Italy major genetic group. The closest relative of the Ru clade (10.7% pairwise genetic distance) was the Italy group, with this latter so far including only the haplotypes of the T biotype. These results were discussed in the light of the recent B. tabaci species concept.  相似文献   

16.
Throughout eastern North America, stands of northern red oak (Quercus rubra L.) are undergoing successional replacement by shade-tolerant competitors. In the Great Lakes-St. Lawrence (GLSL) forest region, Q. rubra approaches the northern limit of its distribution, and ecosystem-specific silvicultural directives are needed to promote regeneration. We used an inductive, ordination-based approach to explore patterns in understorey plant community composition and microenvironment under different partial harvest treatments applied in a GLSL hardwood stand, and related these to characteristics of natural seedlings of Q. rubra and its competitors Acer rubrum and Acer saccharum.Two years after harvest, we established 2 m × 2 m plots in a stratified random design under 70% (n = 20) and 50% (n = 19) crown closure uniform shelterwood, group selection (n = 15), and uncut upper slope (n = 10) and lower slope (n = 10) areas. Percent cover of understorey vascular plant species, and a suite of microclimatic and edaphic variables were measured in each plot. Density, mean diameter and mean height of seedlings in the understorey (height <1 m) were determined in each plot for Q. rubra, A. rubrum and A. saccharum.Correspondence analysis (CA) ordination extracted two major axes explaining 21.6% of the total inertia in the species cover by plot matrix. Axis one separated uncut plots from the 50% shelterwood along a gradient of canopy cover associated with partial harvest treatments. Plot scores on axis one (13.2%) reflected a shift in dominance of the understorey from shade-tolerant Acer spp. to shade-intolerant colonizers, Rubus idaeus and Carex spp. Plot scores on axis one were directly (p < 0.05) associated with total understorey plant cover, litter depth, soil temperature and pH, but not with measures of plant diversity. Axis two (8.4%) separated plots from upper slope and lower slope areas, and plot scores were inversely associated (p < 0.05) with soil pH, phosphorus and nitrogen levels. Along axis two there was a shift in dominance from competitive (e.g. A. saccharum) to stress-tolerant (e.g. A. rubrum) species as soil fertility declined. Stepwise linear regression indicated seedling diameter in Q. rubra, A. rubrum and A. saccharum was inversely related to canopy cover. This suggests all three species benefited from partial harvest, although the relationship was strongest in Q. rubra. Patterns in understorey composition, microenvironment and seedling characteristics provide the basis to identify the main competitors of Q. rubra seedlings and adjust regeneration efforts along gradients of canopy closure and soil fertility under partial harvest systems within the GLSL forest region.  相似文献   

17.
Hybridization and introgression between Quercus alnifolia Poech and Q. coccifera L. is studied by analyzing morphological traits, nuclear and chloroplast DNA markers. The study site is a mixed stand on Troodos Mountains (Cyprus), and the analyzed material includes both adult trees and progenies of specific mother trees. Multivariate analysis of morphological traits shows that the two species can be well distinguished using simple leaf morphometric parameters. A lower genetic diversity in Q. alnifolia than in Q. coccifera and a high interspecific differentiation between the two species are supported by an analysis of nuclear and chloroplast microsatellites. The intermediacy of the four designated hybrids is verified by both leaf morphometric and genetic data. Analysis of progeny arrays provides evidence that interspecific crossings are rare. This finding is further supported by limited introgression of chloroplast genomes. Reproductive barriers (e.g. asynchronous phenology, postzygotic incompatibilities) might account for this result. A directionality of interspecific gene flow is indicated by a genetic assignment analysis of effective pollen clouds with Q. alnifolia acting as pollen donor. Differences in flowering phenology and species distribution in the stand may have influenced the direction of gene flow and the genetic differentiation among effective pollen clouds of different mother trees within species.  相似文献   

18.
The evergreen Quercus alnifolia and Q. coccifera form the only interfertile pair of oak species growing in Cyprus. Hybridization between the two species has already been observed and studied morphologically. However, little evidence exists about the extent of genetic introgression. In the present study, we aimed to study the effects of introgressive hybridization mutually on both chloroplast and nuclear genomes. We sampled both pure and mixed populations of Q. alnifolia and Q. coccifera from several locations across their distribution area in Cyprus. We analyzed the genetic variation within and between species by conducting analysis of molecular variance (AMOVA) based on nuclear microsatellites. Population genetic structure and levels of admixture were studied by means of a Bayesian analysis (STRUCTURE simulation analysis). Chloroplast DNA microsatellites were used for a spatial analysis of genetic barriers. The main part of the nuclear genetic variation was explained by partition into species groups. High interspecific differentiation and low admixture of nuclear genomes, both in pure and mixed populations, support limited genetic introgression between Q. alnifolia and Q. coccifera in Cyprus. On the contrary, chloroplast DNA haplotypes were shared between the species and were locally structured suggesting cytoplasmic introgression. Occasional hybridization events followed by backcrossings with both parental species might lead to this pattern of genetic differentiation.  相似文献   

19.
Studying the biotope of Lasioderma serricorne (F.) in tobacco stores during 2001 and 2002, we identified the ectoparasitoid Lariophagus distinguendus (F.) which parasitises various beetle species. L. distinguendus is reported for the first time in Greece to parasitise L. serricorne in tobacco stores.  相似文献   

20.
Although only Leucaena leucocephala is widely used, most members of the Leucaena genus have potential as multipurpose species for tropical agroforestry systems. To investigate the wood and biomass production potential of the Leucaena genus, 116 accessions covering the 22 species were evaluated over a two-year period at Brisbane, southeast Queensland, Australia. Trees were planted into replicated line plots 5 m long, with rows spaced 3 m apart. Trees were initially planted at 0.5 m spacings within the plots, but were thinned to 1 m spacings prior to the evaluation period. The hybrid accessions, KX2 (L. pallida × L. leucocephala) and KX3 (L. diversifolia × L. leucocephala), were the most productive, yielding over 50 kg dry matter (DM)/tree. L. trichandra OFI53/88 and L. diversifolia CPI33820 were the most productive non-hybrid accessions producing total yields of 41 and 37 kg DM/tree, respectively. Cultivar Tarramba (26 kg DM/tree) was the most productive of the 26 L. leucocephala accessions assessed in the trial but all these accessions suffered from psyllid (Heteropsylla cubana) attack at this site. A series of non-destructive growth measurements was recorded every three months over the two-year evaluation period. Root collar diameter (RCD), stem number and plant height were found to be the most useful of the measurements for non-destructive assessment of accession agronomic characteristics. A relationship between yield and a growth index (calculated as RCD2 × Height/1000), was derived from data from all accessions and could be used as a reliable predictor of yield (r 2 = 0.94). The widespread use of the F1 hybrid leucaenas is currently limited by a lack of seed. Technologies to economically produce F1 hybrid seed on a commercial scale are required before the potential of these accessions in agroforestry systems can be fully realized. This revised version was published online in June 2006 with corrections to the Cover Date.  相似文献   

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