Seed characterisation of five new pomegranate (Punica granatum L.) varieties

This study evaluated the production of five new pomegranate varieties (ME14, ME15, PTO2, PTO7 and CRO1), being all indigenous to Southeastern Spain where the species shows high variability. A morphological and organoleptic characterisation of the edible portion of the seeds were investigated. Some chemical characteristics of the juice, including total soluble solids, pH, acidity and maturity index, were assessed. Morphological characteristics of both the edible and the woody portions of the seed were evaluated. Also productive and organoleptic characteristics of all varieties were considered, being ME14 and ME15 the highest yielders. Furthermore, PTO2 and CRO1 showed the heaviest seeds (both showing an average weight of 0.61 g) while ME15 the lightest one (0.37 g). Regarding seed juice content, there were significant differences among the evaluated varieties; whereas PTO2 and CRO1 showed the highest juice contents, PTO7 yielded the lowest one. However, the cultivar PTO7 showed a significantly higher acidity content than the others, along with the lowest maturity index at all. Finally, ME14 and ME 15 were very interesting because of their high production, large fruit size and excellent seed organoleptic characteristics.     

Seasonal changes of mineral nutrients and phenolics in pomegranate (Punica granatum L.) fruit

Pomegranate fruit is an important source of potentially healthy bioactive compounds and mineral nutrients. Changes in total phenolic compound, concentrations, and levels of macronutrients (P, K, N, Mg, Ca and Na) and micronutrients (Zn, Cu, Mn, Fe and B) in arils and peel of pomegranate fruit were recorded from 10 days after full bloom until harvest. Total phenolics levels increased at early stage of growth both in peel and arils of fruit, but thereafter generally decreased during maturation and reached to 3.70 and 50.22 mg g⁻¹ of dry weight in arils and peel, respectively, at harvest. The amount of total phenolics in peel was markedly higher than arils of pomegranate fruit. The concentration of most elements in arils and peel decreased during fruit growth and development. At harvest the relative order of concentration of macronutrients both in arils and peel was K > N > Ca > P > Mg > Na. The concentration of most micronutrients was greater in the arils than in the peel especially in early season. The relative order of concentration of micronutrients in arils was B > Fe > Zn > Cu > Mn. The accumulation of all the macro- and microelement within the fruit also increased during fruit growth and development. These results provide important data on total phenolics and macro- and micronutrient changes during fruit growth and development, emphasizing that pomegranate fruit can be a good source of bioactive compounds and minerals.     

Morpho-pomological and chemical characterization of pomegranate (Punica granatum L.) genotypes in Apulia region,Southeastern Italy

A recent increasing demand in Western countries for pomegranate products by consumers is especially supported for the nutritional and medicinal characteristics, due to the antioxidant properties of this fruit. Some studies have been published on the morphological and biochemical characteristics of pomegranate fruits in some Mediterranean countries, but little information is available about the genotypes present in Italy and in particular in Apulia (Southeastern region of Italy). This study (2008–2009) evaluated morpho-pomological and chemical parameters of eight pomegranate genotypes localized in private small orchards. Significant differences were observed among the pomegranate genotypes for many of the parameters investigated. In particular, fruit weight ranged from 168.9 g (SouMol) to 574.9 g (SouOst), °Brix from 14.7 (ComTri) to 18.0 (SouMol), titratable acidity from 5.4 (ComMol) to 25.0 (SouTri) g/L. SouMol showed the highest polyphenols (97.1 mg/L) and vitamin C (236.3 mg/L) contents. Oil content of the seeds was between 5.90% and 10.30%, no differences have been observed for the fatty acid composition with conjugated linoleic acid (CLA) isomers as the most abundant fraction (81.23%). Considering all the evaluated parameters, and especially those referring to the organoleptic characteristics and antioxidants content, it must be stated that the best genotypes worthy to be considered from agricultural and industrial points of view were AdeSgi for fresh market and SouOst for the juice industry.     

Genetic analysis of Tunisian fig (Ficus carica L.) cultivars using amplified fragment length polymorphism (AFLP) markers

Genetic diversity of forty fig cultivars collected from five regions in Tunisia was investigated using amplified fragment length polymorphism (AFLP). A total of 342 reproducible bands amplified with six AFLP primer combinations were obtained. The high percentage of polymorphic bands (%PB) of 97.5 and the resolving power (Rp) collective rate value of 143 were scored. In addition, the polymorphism information content (PIC) values varied from 0.61 to 0.87 with an average of 0.77. Although cluster (UPGMA) and principal components analyses indicate that the cultivars’ clustering made independently both from the geographical origin, horticultural classifications and/or from the sex of trees. In addition, the observed variation suggests considerable differentiation among fig cultivars. The present data supports the common origin of the fig cultivars. Analysis of molecular variance (AMOVA) revealed that average Φ_ST value overall loci was 0.026, and the overall distribution pattern of molecular variation indicated that about 97.43% of the total variance was accounted by the within-region variance component. The remaining 2.5% (P < 0.001) of the variation was founded among cultivars of the prospected regions. Our results proved that AFLP markers are useful for germplasm discrimination as well as for investigation of fig patterns variation. The information may be useful to define conservation management program.     

Genetic diversity and population genetic structure of pomegranate (Punica granatum L.) in Iran using AFLP markers

Pomegranate (Punica granatum L.) is one of the oldest known edible fruits. It is native to Iran and spread from Iran to other areas. In this study amplified fragment length polymorphism (AFLP) was used to detect intra- and inter-population genetic diversity of pomegranate. A group of 67 accessions belonged to 4 populations from Iran was studied using eight primer combinations. A total of 221 scorable bands were amplified, of which, 118 (54.13%) were polymorphic. Resolving power (Rp) ranged from 5.70 to 9.21, and the average of polymorphism information content (PIC) per primer pair was 0.40. According to Nei's gene diversity and allelic statistics, Isfahan population had a highest genetic diversity (H = 0.3646, I = 0.5327, N_e = 1.6467). Coefficient of gene differentiation between populations (GST) was 0.124, indicated that mainly proportion of genetic variation (87.6%), was within populations and the remaining (12.4%) of the variation was among populations that, also supported by analysis of molecular variance (AMOVA). The gene flow (Nm) varied from 0.969 to 10.404 between pair-wise populations and was 3.504 among all of the populations. The Jaccard similarity coefficient between individuals ranged from 0.26 to 0.88. The UPGMA dendrogram clustered all 67 accessions into 6 groups. In some cases accessions from same region were grouped together but in most cases, there was gene exchange. To study the genetic relationships among populations, a principal coordinate analysis (PCoA) based on Nei's genetic distances was performed. Results of this study showed that AFLP marker can be a useful tool for investigating the genetic diversity of pomegranate genotypes.     

Assessment of genetic diversity in common bean (Phaseolus vulgaris L.) germplasm using amplified fragment length polymorphism (AFLP)

AFLP technique was applied to assess genetic diversity among 44 common bean accessions that included 6 exotic accessions, 15 Indian land races and 23 released varieties. Eight AFLP primer pairs were used that produced 820 products of which 698 were polymorphic (85.12%). Wide variations were observed among all the accessions for the number of amplification products, percent polymorphism and average polymorphism information content (PIC). The Jaccard's similarity indices (J) based on the AFLP profiles were subjected to UPGMA cluster analysis. The dendrogram generated revealed seven major groups. Seventeen out of 23 released varieties were restricted to clusters VI and VII. The value of r = 0.934 in Mantel's test for cophenetic corrlelation applied to the cluster analysis indicated the high fitness of the accessions to a group. The germplasm used in the present study had narrow genetic base, although moderate to high genetic diversity was observed. The details of diversity analysis and the potential use of Indian common bean accessions in common bean breeding programme are provided in the present study.     

Investigation of physico-chemical properties and antioxidant activity of twenty Iranian pomegranate (Punica granatum L.) cultivars

Pomegranate is one of the native fruits of Iran which contains high genetic resources, but there are insufficient information regarding properties of the fruit. The objective of the present study was to investigate the physcio-chemical characteristics and antioxidant activity of twenty pomegranate cultivars grown in Iran. This study showed that there were significant differences among the cultivars in all measured factors except the length/diameter ratio of fruit. The fruit weight, skin percentage, aril percentage and juice percentage were within the range of 196.89–315.28 g, 32.28–59.82%, 37.59–65% and 26.95–46.55%, respectively. The total soluble solids content varied from 11.37 (°Brix) to 15.07 (°Brix), pH values from 3.16 to 4.09, titratable acidity content from 0.33 g 100 g⁻¹ to 2.44 g 100 g⁻¹ and total sugars content from 13.23 g 100 g⁻¹ to 21.72 g 100 g⁻¹. The results also showed that the values of ascorbic acid ranged from 9.91 mg 100 g⁻¹ to 20.92 mg 100 g⁻¹. The total anthocyanins content was observed in pomegranate cultivars between 5.56  mg 100 g⁻¹ and 30.11 mg 100 g⁻¹. The level of total phenolics was varied from 295.79 mg 100 g⁻¹ to 985.37 mg 100 g⁻¹. The antioxidant activity of pomegranate cultivars was found between 15.59 and 40.72%. These data demonstrated that the cultivar was the main parameter which influences the physico-chemical properties and antioxidant activity in pomegranates.     

Mass modeling of pomegranate (Punica granatum L.) fruit with some physical characteristics

Among physical characteristics, dimensions, mass, volume and projected areas are important parameters in sizing and grading systems. Fruits with the similar weight and uniform shape are desirable in terms of marketing value. Therefore, grading fruit based on weight reduces packing and handling costs and also provides suitable packing patterns. The different grading systems require different fruit sizing based on particular parameters. In this study pomegranate mass was predicted by applying different physical characteristics with linear and nonlinear models as three different classifications: (1) single or multiple variable regressions of pomegranate dimensional characteristics, (2) single or multiple variable regression of pomegranate projected areas and (3) estimating pomegranate mass based on its volume. The results showed that mass modeling of pomegranate based on minor diameter and three projected areas are the most appropriate models in the first and second classifications, respectively. In third classification, the highest determination coefficient was obtained for mass modeling based on the actual volume as R² = 0.99 whereas corresponding values were 0.93 and 0.79 for assumed pomegranate shapes (oblate spheroid and ellipsoid), respectively. In economical and agronomical point of view, suitable grading system of pomegranate mass was ascertained based on minor diameter as nonlinear relation M = 0.06c² − 4.11c + 143.56, R² = 0.91.     

RAPD markers reveal polymorphism among some Iranian pomegranate (Punica granatum L.) genotypes

In this study RAPD markers were used to determine the diversity level among 24 Iranian pomegranate genotypes. One hundred decamer random primers were used for PCR reactions, among which 16 showed reliable polymorphic patterns. These primers produced 178 bands, of which 102 were polymorphic. Cluster analysis of the genotypes was performed based on data from polymorphic RAPD bands, using Jaccard's similarity coefficient and UPGMA clustering method. The highest and lowest similarities detected between genotypes were 0.89 and 0.29, respectively. At a similarity of 60%, the genotypes were divided into four sub-clusters. Cophenetic correlation coefficient between similarity matrix and cophenetic matrix of dendrogram was relatively high (r = 0.9) showing the goodness of fit of the dendrogram. RAPD markers showed to be a useful tool for studying the genetic diversity of pomegranate.     

Amplified fragment length polymorphism (AFLP) markers for fingerprinting of Argyranthemum frutescens cultivars

Argyranthemum frutescens is a commercially important ornamental species with extensive breeding programmes in several countries. Since it is vegetatively propagated there is a great need for tools for identification of cultivars. Vegetatively propagated species require clean-up from diseases, often performed through meristem-tip cultures. Forty-three cultivars of A. frutescens propagated by meristem-tip culture and traditional cuttings were analyzed for genetic relatedness and possible somaclonal variation using AFLP. Five primer combinations resulted in a relatively high degree of polymorphism. Ten molecular markers generated by one primer combination could distinguish between all 43 cultivars. Differences in fingerprints between meristem-tip culture and cuttings from the same cultivars were found, but the proportion of fragments being specific for either tissue culture or cuttings was relatively low. Some cultivars that did not display somaclonal variation as judged by the AFLP-fingerprints may still be genetically unstable since some morphological variation was observed in the true to type test.     

Nutrient-alginate encapsulation of in vitro nodal segments of pomegranate (Punica granatum L.) for germplasm distribution and exchange

The present paper demonstrates the potential of nutrient-alginate encapsulation of axenic nodal segments of pomegranate for synthetic seed technology, which could be useful in germplasm distribution and exchange. Nodal segments from in vitro shoot cultures derived from mature nodal explants (source A) or axenic cotyledonary nodes (source B) were encapsulated in calcium alginate hydrogel containing Murashige and Skoog's [Murashige, T., Skoog, F., 1962. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant 15, 473–497] medium (MS) supplemented with 4.44 μM benzyladenine (BA) and 0.54 μM naphthalene acetic acid (NAA). Of various concentrations of sodium alginate (1–6%) and the complexation solution of calcium chloride (50–125 mM), a combination of 3% sodium alginate and 100 mM calcium chloride was most suitable for formation of ideal synthetic seeds. Morphogenic response of encapsulated nodal segments to seven different planting media was evaluated. Encapsulated nodal segments of both the sources exhibited shoot development only in four selected media. Of the planting media evaluated, % sprouting (shoot development) was the highest in MS medium augmented with 4.44 μM BA and 0.54 μM NAA and lowest in (1/2) MSS medium. One step germination i.e. both shoot and root formation was possible only with encapsulated nodal segments of source B in MS, (1/2) MSS and natural soil + (1/2) MSS, with MS being most effective. Encapsulated nodal segments stored up to 30 days at 4 °C were capable of sprouting. Plants regenerated from the encapsulated nodal segments were hardened off and transferred to soil.     

Assessment of genetic diversity among mango (Mangifera indica L.) genotypes using RAPD markers

Knowledge about the extent of genetic diversity/relatedness in mango germplasm is vital for developing coherent strategies for future gains in productivity. The genetic diversity/relatedness among mango cultivars/genotypes developed in Pakistan has not been investigated previously. We have assessed the genetic diversity among 25 mango genotypes/cultivars using randomly amplified polymorphic DNA (RAPD). Sixty random ten-mer primers were surveyed, out of which 45 yielded amplicons in all the genotypes. Genetic similarity between genotypes/cultivars was in the range of 64–89% with an average of 74%. Similarly, the genetic relatedness among all variants derived from a mango cultivar Chaunsa was in the range of 81.18–88.63%. These coefficients were utilized to construct a dendrogram using the unweighted pair group of arithmetic means (UPGMA). The genotypes were grouped into three (A, B, C) clusters. Generally, genotypes originating from Pakistan were grouped in cluster ‘A’ while cluster ‘B’ primarily composed of southern India as well as Florida cultivars. Kensington Pride was the most distantly related genotype which grouped with Maya and Yakta, forming a distinct cluster ‘C’.     

Genetic diversity in local Tunisian pears (Pyrus communis L.) studied with SSR markers

Few records are available about local Tunisian pear cultivars characterized by low chilling requirements and adaptation to dry conditions. In this work, seven SSRs derived from apple were successfully transferred to 25 local Tunisian pear genotypes and 6 common varieties of Pyrus communis cultivated in Europe. The 7 SSRs used amplified a total of 36 fragments. All the microsatellites except one seem to amplify more than one locus in some of the genotypes studied. Only 12 different fingerprinting patterns could be distinguished among the 25 Tunisian cultivars studied indicating a high number of synonymies. The mean expected and observed heterozygosities in the 25 Tunisian cultivars analyzed averaged 0.71 indicating a high level of genetic diversity among the local Tunisian pear germplasm. These markers will be useful to optimize the conservation of this highly threatened germplasm.     

Assessing Rosa persica genetic diversity using amplified fragment length polymorphisms analysis

The genetic diversity among 128 Iranian Rosa persica (R. persica) accessions in the different populations was analyzed. Amplified fragment length polymorphisms (AFLP) technique was used to produce 171 polymorphic fragments. The number of polymorphic loci ranged from 101 to 147 and the polymorphism information content (PIC) varied from 0.289 to 0.073, with an average of 0.16. This shows extreme variability and genetic diversity among the studied R. persica populations. An indirect estimate of the number of migrants per generation (Nm = 0.376) indicated that gene flow was relatively low among populations of the species. Cluster analysis using the UPGMA method grouped all accessions into six clusters. The results did not show relative agreement with the genotypes’ region of origin. Based on an analysis of molecular variance, 48% of the genetic variation of R. persica was within population and 52% was among populations. The present analysis revealed that Iranian R. persica genotypes are highly variable and genetically distinct from their origins. The apparent unique nature of the R. persica genotypes revealed by our results supports the case for the implementation of more intense characterization and conservation strategies, and provides useful information to address breeding programmes and germplasm resource management in Rosa spp.     

Biofertilizers improve plant growth,fruit yield,nutrition, metabolism and rhizosphere enzyme activities of Pomegranate (Punica granatum L.) in Indian Thar Desert

Production of horticultural crops has undergone enormous change in recent years due to development of innovative technologies including integrated nutrient management practices using biofertilizers. The present study represents the positive response of biofertilizers in nursery seedlings followed by their transplantation in harsh field conditions of Indian Thar Desert. Nursery and field experiments were carried out to assess the effectiveness of selected N₂-fixing bacteria and AM fungi alone or in combination, on the growth and biomass production of Punica granatum. In both experiments, the combined treatment of Azotobacter chroococcum and Glomus mosseae was found to be the most effective. Besides enhancing the rhizosphere microbial activity and concentration of various metabolites and nutrients, these bioinoculants helped in better establishment of pomegranate plants under field conditions. A significant improvement in the plant height, plant canopy, pruned material and fruit yield was evident in 5-year-old pomegranate plants in field conditions. In view of the above results, use of biofertilizer technology may be adopted for the establishment and development of other horticultural plant species in arid regions.     

Phenotypic variability and genetic structure in plum (Prunus domestica L.), cherry plum (P. cerasifera Ehrh.) and sloe (P. spinosa L.)

In the present study, phenotypic variability of 80 plum (Prunus domestica L.) varieties maintained in the French National Plum Collection was evaluated with 19 quantitative traits. In addition, genetic diversity and genetic structure was studied in three plum species (P. domestica L., Prunus cerasifera Ehrh. and Prunus spinosa L.) using chloroplast DNA (cpDNA) markers and five single sequence repeat (SSR) loci. Based on phenotypic traits, some varieties, such as mirabelle plums, grouped together. Bayesian structure analysis was used to identify different genetic groups, whereby damson plums were clearly distinguished from greengage plums. When examining the three species together, a higher level of cpDNA allelic richness was found in P. cerasifera and in P. spinosa than in P. domestica where only five cpDNA haplotypes were detected in the national plum collection, with one main haplotype that accounted for 80% of the varieties studied. P. domestica cpDNA haplotypes tended to group together with P. cerasifera haplotypes whereas most of P. spinosa haplotypes formed a separate cluster. SSR markers were somewhat able to distinguish the three species. These results provide some clues as to the origin of plum and the various plum varieties. Our results also provide useful information for the management of plum genetic resources.     

The effect of maturity,sunburn and the application of sunscreens on the internal and external qualities of pomegranate fruit grown in Australia

Consumer interest in pomegranate fruit (Punica granatum L.) is increasing in Australia as a result of its unique external and internal qualities. This work looked at the effect of applying sunscreen treatments to pomegranate fruit on the degree of sunburn damage and the effect of maturity and sunburn on the internal antioxidant concentration of the juice. The pomegranates, cultivar ‘Wonderful’ were grown in Condobolin, New South Wales, Australia.     

Characterization of progenies derived from pollination of pomegranate cv. Malase-Tourshe-Saveh using fruit traits and RAPD molecular marker

Fruit traits and molecular markers (RAPD) were used to survey genetic similarities and inheritance pattern of offspring, derived from self- and open pollination of pomegranate cv. Malase-Tourshe-Saveh (MTS) as well as progenies derived from cross between ‘MTS’ and ‘Narm-Daneh’ (ND) a soft-seed cultivar in the present study. Clustering based on fruit traits, divided the accessions firstly into two major groups, sweets and sour or sweet–sours. Members of sub-clusters were different in fruit characters, and seed softness also was affecting the grouping of individuals. Offspring of ‘MTS’ × ’ND’ showed somehow seed softness with varying degrees compared to other individuals. In RAPD analysis, by using 26 polymorphic primers, 325 fragments were produced from 39 individuals, among which 70 reproducible, polymorphic bands were scored for data analysis. NTsys and Bootstrap software were used for RAPD data analysis and respective dendrogram depicted by Jaccard's similarity coefficients using UPGMA method. The similarity coefficients were ranging from 0.2 to 0.94 and the lowest was obtained between pollen parent (ND cv.) and a genotype from open pollination of MTS cultivar. The highest similarity coefficient (0.94) was observed between two offspring both from self-pollination of MTS cultivar. In corresponding dendrogram, pollen parent was separated from other genotypes and laid individually in a sub-cluster, while the mother plant clustered with its progenies. In addition, some marker–trait associations were observed, especially for seed softness.     

Identification of Italian landraces of bean (Phaseolus vulgaris L.) using an image analysis system

Colour, shape and size of whole seeds and their spots of some Italian landraces of bean (Phaseolus vulgaris L.) were measured using a specifically developed macro, based on image analysis library KS-400 V 3.0 (Carl Zeiss, Germany).