Zinc uptake by mycorrhizal and uninfected roots of Pinus radiata and Araucaria cunninghamii

Uptake of zinc from solution by uninfected roots, ectomycorrhizas of Pinus radiata, and endomycorrhizas of Araucaria cunninyhamii occurred by a non-metabolic phase and by metabolically mediated absorption. The metabolically mediated absorption of Zn was 1.4–4.5 times greater for ectomycorrhizas than for uninfected roots and 2.6 times greater for endomycorrhizas than for uninfected roots. Part of the increase with ectomycorrhizas was due to their larger size than uninfected roots and when corrected for this, the uptake/cm² was 1.4–3.0 times greater. The roles of mycorrhizas in uptake of Zn and other trace elements from soil are discussed.     

Soil methane oxidation and methanotroph responses to afforestation of pastures with Pinus radiata stands

Afforestation of pastures in New Zealand reduces methane (CH₄) production from soil, while also stimulating oxidation of atmospheric CH₄ by soil methanotrophs. However, neither the mechanisms by which soil CH₄ oxidation is enhanced by afforestation, nor how long after forest planting tree-dependent responses in CH₄ oxidation become detectable are fully known. Here, we investigated the effects of different-aged stands (5-20 y) of the exotic pine (Pinus radiata (D. Don)) on CH₄ oxidation and methanotrophic community structure in soils, compared with adjacent, long-established pastures. Two of the pastures were on volcanic soils and two were on non-volcanic soils. Although the CH₄ fluxes in soils from these young stands were not significantly different from those in the associated pastures, the rate of oxidation of added ¹³CH₄ was higher in the pine soils. Both fluxes and ¹³CH₄ oxidation rates were higher in the volcanic than the non-volcanic soils. Combined phospholipid fatty acid (PLFA) and stable isotope probe (SIP) analyses suggested that type II methanotrophs (PLFA C18:1ω7) were most active in all soils followed by uncultivable bacteria (C17:0ai). Molecular analysis of the methanotrophic community structure using pmoA (particulate methane monooxygenase) genes suggested that a particular type II methanotroph (TRF 35) was dominant in all soils, but more so in the pine than in pasture soils. A type I methanotroph (TRF 245) was more prevalent in the pasture than in associated pine soils, whereas TRF 128 (a type II methanotroph) was slightly more dominant in soils under pine. Cloning and sequencing data suggest TRFs 35 and 128, which differ from one another, belong to distant relatives of Methylocapsa sp; TRF 245 is related to Methylococcus capsulatus. Land-use change resulted in changes in soil bulk density, porosity, moisture contents and in methanotrophic community structure. Methane oxidation rates were most closely related to soil moisture, as well as to the methanotrophic community structure, and nitrate-N, extractable C and total C concentrations. Stepwise multiple regression also suggested a weak effect (P = 0.06) of stand age on CH₄ oxidation rate. By contrast, the responses of the methanotrophic community structure to this land-use change were more readily detected by the specific molecular analyses, and indicated a predominance of type II methanotrophs in pine soils.     

Production of ethylene by incubated litter of Pinus radiata

The inhibitory effect of vapour from incubated P. radiata D. Don litter to clover (Trifolium repens L.) hypocotyl growth was completely removed by KMnO₄ and ?195°C traps, but not affected by a cold trap at ?100°C. Plumule growth of rice (Oryza sativa L.) seedlings was stimulated by litter vapour, and this stimulation was removed by the KMnO₄ trap. A peak with the same retention time as ethylene was detected in the litter vapour by gas chromatography. The addition of C₂H₄ to vapour which had been passed through the KMnO₄ trap fully restored inhibition.     

Soil organic N dynamics and stand quality in Pinus radiata pinewoods of the temperate humid region

Soil organic-N dynamics, its controlling factors and its relationships with stand quality were studied in the 0-15 cm soil layer of 24 pinewoods with contrasting age, productivity and parent material (granite; acid schists), searching for N variables useful to predict stand growth and site quality. No significant differences were found between young and old stands for any of the N variables considered, nor two- or three-order interactions among stand age, site quality and parent material. The soil total-N content, which was correlated positively with the Al oxides content (a soil organic matter (SOM) stabilizing agent), did not vary significantly according to parent material, but it was lower (P≤0.02) in stands with high than with low site index (2.68±1.11 and 3.97±1.13 g N kg⁻¹ soil, respectively). The soil δ¹⁵N ranged from +3.5 to +6.5 δ, without significant differences among stand groups, and it was negatively correlated with water holding capacity, exchangeable bases, Al oxides and N content, suggesting that: (i) N losses by NO₃⁻ leaching are the most important controlling factor of δ¹⁵N in these temperate humid region soils; and (ii) soil N richness is related with limited N losses, which discriminate against ¹⁵N. At any incubation time, no significant differences were found in soil inorganic-N content among stand groups (7.78±4.57, 39.33±16.20 and 67.80±26.50 mg N kg⁻¹ soil at 0, 42 and 84 d, respectively). During the incubation, the relative importance of ammonification decreased and that of the nitrification increased. The net N mineralization rate (NNMR, in percentage of organic N) was significantly higher in granite than in schists soils at both 42 d (1.24±0.34 and 0.75±0.37%, respectively) and 84 d (2.18±0.56 and 1.53±0.66%, respectively). In high quality pinewoods, the NNMR at 42 and 84 d (1.16±0.45 and 2.12±0.79%, respectively) were significantly higher than in low quality stands (0.83±0.35 and 1.59±0.45%, respectively). This result, together with those on soil total-N and inorganic-N supply, suggests that soil N dynamics in low and high quality stands are different: in the former there is a bigger N pool with a slower turnover, whereas in the latter there is a smaller N pool with a faster turnover, both factors being nearly compensated, making the soil available N supply in both types of stand similar. After 42 and 84 d of incubation, the NNMR and the nitrification rates were higher in the coarse textured soils, likely due to the low physical and chemical protection of their SOM; both rates were positively correlated with available P, exchangeable K⁺ and CEC base saturation, suggesting strong relationships among the availabilities of the main plant nutrients, and they increased with SOM quality (low C-to-N ratio). The strong negative correlation of site index with soil total-N (r=−0.707; P≤0.005), and its positive correlations with NNMR after 42 and 84 d of incubation, suggested that site quality and potential productivity are closely related to soil organic-N dynamics. Half of the site index variation in the stands studied could be predicted with a cheap and easy analysis of soil N content, the prediction being slightly improved if soil δ¹⁵N is included and, more significantly, by including N mineralization measurements.     

Physical protection of soil organic matter following mechanized forest operations in Pinus radiata D.Don plantations

Mechanized forest operations have a large impact on soil systems, and may cause disruption of aggregates and exposure of previously protected soil organic matter to microbial attack. In this study, we investigated how C storage, soil structure and unprotected, physically protected and resistant C pools recover 0, 7 and 20 years after mechanical harvesting and site preparation in second rotation Pinus radiata D.Don plantations. We detected differences in dry mean weight diameter (DMWD) of aggregates, with higher DMWD in 0- and 7-year-old pine stands (8.7 and 7.5 mm, respectively) than in 20-year-old stands (4.1 mm). This was attributed to the compaction induced by heavy machinery, as reflected by the positive relationship between DMWD and bulk density (r = 0.85, P < 0.05). Organic C contents in the top 5 cm were similar 0 and 7 years after disturbance, but were twice as high after 20 years, with mean values of 25, 28 and 52 Mg C ha⁻¹, respectively. In addition, the resistant C pool was also reduced by up to 7% after clearance. In contrast, unprotected C and physically-protected C were greatest in the youngest stands, indicating that stand establishment and harvesting with heavy machinery may have broken soil aggregates and exposed the previously protected SOM to microbial decomposition and that forest operations may create new mega-aggregates able to protect organic residues. However, the lowest physically-protected C values in 20-year-old pine stands may also be attributed to differences in SOM quality. The alkyl C/O-alkyl C ratios were highest in the oldest stands, indicating that SOM in these stands was more resistant to further decomposition. Mechanized forest operations in radiata pine stands released at least 30 t C ha⁻¹ from the first 5 cm of the soil profile immediately after clearance, caused significant alterations in the soil structure, which lasted for a minimum of seven years, and also reduced the resistant C pool. As the Kyoto Protocol encourages forest management practices that potentially increase carbon sequestration, mechanical harvesting and site preparation in these steep slopes should be reconsidered.     

Density loss and respiration rates in coarse woody debris of Pinus radiata, Eucalyptus regnans and Eucalyptus maculata

This study compared field and laboratory decomposition rates of coarse woody debris (CWD) (>10 cm diameter) from three tree species: Pinus radiata, Eucalyptus regnans, and Eucalyptus maculata. For this purpose, the density loss of logs on the ground sampled from chronosequences of sites following harvesting was determined using the water replacement technique. P. radiata logs were sampled 1, 2.5, 6, and 9 years following harvesting, and logs of E. regnans and E. maculata were collected from sites that were harvested 1, 3.5, 6.5, and 12 and 1.5, 6.5, and 11.5 years ago, respectively. In addition, the C/N ratio of wood was determined and current respiration rates of logs from these different age classes were measured through laboratory incubation. The times for loss of 95% of material (t_0.95) determined from density loss for these species were 24 years for P. radiata, 43 years for E. regnans, and 62 years for E. maculata. The decomposition rates of CWD derived from laboratory respiration were 6.1, 5.9 and 11.9 times higher than the decay rates from density loss in P. radiata, E. regnans, and E. maculata, respectively. This points to severe constraints of decomposition through adverse conditions in the field. The changes in respiration rates and C/N ratio with age of decaying logs indicated that the single component, negative exponential decay model could be applied satisfactorily only to P. radiata. In the case of the eucalypt species, substrate quality (expressed through respiration rates) declined in the oldest samples. This may be explained by the loss of rapidly decomposing sapwood and the retention of more decay-resistant heartwood. In these cases, a two-component model will be more suitable to describe the density loss of decaying wood.     

Quantification of Wautersia [Ralstonia] basilensis in the mycorrhizosphere of Pinus thunbergii Parl. and its effect on mycorrhizal formation

The bacterium Wautersia [Ralstonia] basilensis has been shown to enhance the mycorrhizal symbiosis between Suillus granulatus and Pinus thunbergii (Japanese black pine). However, no information is available about this bacterium under field conditions. The objectives of this study were to detect W. basilensis in bulk and mycorhizosphere soils in a Japanese pine plantation in the Tottori Sand Dunes, determine the density of W. basilensis in soil, and determine the optimal cell density of W. basilensis for mycorrhizal formation in pine seedlings. We designed and validated 16S rRNA gene-targeted specific primers for detection and quantification of W. basilensis. SYBR Green I real-time PCR assay was used. A standard curve relating cultured W. basilensis cell density (10³-10⁸ cells ml⁻¹) to amplification of DNA showed a strong linear relationship (R = 0.9968). The specificity of the reaction was confirmed by analyzing DNA melting curves and sequencing of the amplicon. The average cell density of W. basilensis was >4.8 × 10⁷ cells g⁻¹ of soil in the mycorrhizosphere and 7.0 × 10⁶ cells g⁻¹ in the bulk soil. We evaluated the W. basilensis cell density required for mycorrhizal formation using an in vitro microcosm with various inoculum densities ranging from 10² to 10⁷ cells g⁻¹ soil (10⁴-10⁹ cells ml⁻¹). Cell densities of W. basilensis of >10⁶ cells g⁻¹ of soil were required to stimulate mycorrhizal formation. In vivo and in vitro experiments showed that W. basilensis was sufficiently abundant to enhance mycorrhizal formation in the mycorrhizosphere of Japanese black pine sampled from the Tottori Sand Dunes.     

Physiological, biochemical and molecular responses of the soil microbial community after afforestation of pastures with Pinus radiata

Afforestation and deforestation are key land-use changes across the world, and are considered to be dominant factors controlling ecosystem functioning and biodiversity. However, the responses of soil microbial communities to these land-use changes are not well understood. Because changes in soil microbial abundance and community structure have consequences for nutrient cycling, C-sequestration and long-term sustainability, we investigated impacts of land-use change, age of stand and soil physico-chemical properties on fungal and bacterial communities and their metabolic activities. This study was carried out at four sites in two geographical locations that were afforested on long-established pastures with Pinus radiata D. Don (pine). Two of the sites were on volcanic soils and two on non-volcanic soils and stand age ranged from 5 to 20 y. Microbial communities were analysed by biochemical (phospho-lipid fatty acids; PLFA) and molecular (multiplex-terminal restriction fragment length polymorphism; M-TRFLP) approaches. Both site and stand age influenced microbial properties, with changes being least detectable in the 5-y-old stand. Land use was a key factor influencing soil metabolic activities as measured by physiological profiling using MicroResp. Pasture soils had higher microbial biomass (P < 0.001), and metabolic activities (P < 0.001), and basal respiration rates were up to 2.8-times higher than in the pine soils. Microbial abundance analysis by PLFA showed that the fungal to bacterial ratio was higher in the pine soils (P < 0.01). Community analysis suggested that soil bacterial communities were more responsive to site (principal component 1; P < 0.001) than to land use (principal component 5; P < 0.001). In contrast, the fungal community was more affected by land-use change (principal component 1; P < 0.001) than by site, although site still had some influence on fungal community structure (principal component 2; P < 0.001). Redundancy analysis also suggested that bacterial and fungal communities responded differently to various soil abiotic properties, land-use change and location of sites. Overall, our results indicate that the change in land use from pasture to P. radiata stands had a direct impact on soil fungal communities but an indirect effect, through its effects on soil abiotic properties, on bacterial communities. Most of the changes in bacterial communities could be explained by altered soil physico-chemical properties associated with afforestation of pastures.     

Soil moisture affects the interaction between Gaeumannomyces graminis var. Tritici and antagonistic bacteria

Reduction in the soil moisture from a potential of ?10 to?108 kPa reduced the growth of Gaeumannomyces graminis. The antagonist Bacillus cereus only spread through the soil or sand at potentials between ?10 and ?60 kPa. The spread of B. pumilus was not affected by the water potential within the range tested. Both B. cereus and B. pumilus were less antagonistic in the drier sand and soil. When the bacteria and the fungus were grown together the maximum growth of the fungus occurred at those potentials when bacterial antagonism was reduced but the fungus was still able to grow.     

Post-harvest residue management effects on recalcitrant carbon pools and plant biomarkers within the soil heavy fraction in Pinus radiata plantations

Forest soils contain about 30% of terrestrial carbon (C) and so knowledge of the influence of forest management on stability of soil C pools is important for understanding the global C cycle. Here we present the changes of soil C pools in the 0-5 cm layer in two second-rotation Pinus radiata (D.Don) plantations which were subjected to three contrasting harvest residue management treatments in New Zealand. These treatments included whole-tree harvest plus forest floor removal (defined as forest floor removal hereafter), whole-tree, and stem-only harvest. Soil samples were collected 5, 10 and 15 years after tree planting at Kinleith Forest (on sandy loam soils) and 4, 12 and 20 years after tree planting at Woodhill Forest (on sandy soils). These soils were then physically divided into light (labile) and heavy (stable) pools based on density fractionation (1.70 g cm⁻³). At Woodhill, soil C mass in the heavy fraction was significantly greater in the whole-tree and stem-only harvest plots than the forest floor removal plots in all sampling years. At Kinleith, the soil C mass in the heavy fraction was also greater in the stem-only harvest plots than the forest floor removal plots at year 15. The larger stable soil C pools with increased residue return was supported by analyses of the chemical composition and plant biomarkers in the soil organic matter (SOM) heavy fractions using NMR and GC/MS. At Woodhill, alkyl C, cutin-, suberin- and lignin-derived C contents in the SOM heavy fraction were significantly greater in the whole-tree and stem-only harvest plots than in the forest floor removal plots in all sampling years. At Kinleith, alkyl C (year 15), cutin-derived C (year 5 and 15) and lignin-derived C (Year 5 and 10) contents in the SOM heavy fraction were significantly greater in stem-only harvest plots than in plots where the forest floor was removed. The analyses of plant C biomarkers and soil δ¹³C in the light and heavy fractions of SOM indicate that the increased stable soil C in the heavy fraction with increased residue return might be derived from a greater input of recalcitrant C in the residue substrate.     

The invasion of two native Eucalypt forests by Pinus radiata in the Blue Mountains, New South Wales, Australia

Invasions of Pinus species are a major environmental concern in South Africa and New Zealand where pines are beginning to dominate native grasslands and shrublands. Pines are widely cultivated in Australia with almost a million hectares growing in large plantations. Plantations are commonly bordered by native Eucalypt vegetation resulting in a high potential for invasion and providing an opportunity to study pine invasion processes within forest environments.In order to determine if Pinus radiata equally invades different dry Eucalypt woodland vegetation types, two areas in the upper Blue Mountains in New South Wales, Australia were surveyed. Similar levels of invasion were observed in both Eucalypt forest types. An average pine abundance of 55 individuals for the Eucalyptus oreades and Eucalyptus sieberi vegetation type and 49 individuals for the Eucalyptus mannifera and Eucalyptus dives vegetation type was recorded in 20 m by 20 m plots located 50 m from the plantation boundary. To characterise the spatial distribution of the pines, transects were placed perpendicular to the plantation edge. As expected pine numbers diminished with distance from the plantation, however, large reproductive pine trees were found up to 4 km from the seed source signifying long distance dispersal.Investigation of wildling pine response to fire suggests that it may not always be an appropriate management tool. Fire stimulated seed release from cones and resulted in high recruitment of seedlings around reproductive pines which were large enough to survive the burn. Infrequent fires at intervals greater than time to maturity will lead to increased pine densities and further spread into the native vegetation.     

Soil temperature,mycorrhizal infection and nodulation of Medicago truncatula and Trifolium subterraneum

Establishment of vesicular-arbuscular mycorrhizal fungi in plant roots involves a pre-infection phase of propagule germination, hyphal growth and appressorium formation, followed by growth of the fungus within the root. The effect of soil temperature on the pre-infection stage was examined by counting the numbers of fungal “entry-points” on the main roots of Medicago truncatula and Trifolium subterraneum, grown at soil temperatures of 12°, 16°, 20° and 25°C for periods up to 12 days. Increased root temperature was positively associated with increased numbers of “entry-points”. This effect was more marked between 12° and 16°C than at higher temperatures, as shown by comparing plants at the same stage of development (emergence of spade leaf) and by calculating the results as entry points per cm root.The first root nodules appeared sooner at higher temperatures (20° and 25°), but subsequent development of nodules (measured as nodule number and aggregate volume of nodules per plant, up to 21 days) was best at 16°C for both host Rhizobium combinations in non-sterile and autoclaved soil. There was no evidence that competition between mycorrhizal fungi and Rhizobium for infection sites occurred.A method of obtaining numbers of infective propagules of vesicular-arbuscular mycorrhizal fungi in soil is described.     

Methane uptake in soils from Pinus radiata plantations, a reverting shrubland and adjacent pastures: Effects of land-use change, and soil texture, water and mineral nitrogen

Afforestation and reforestation of pastures are key land-use changes in New Zealand that help sequester carbon (C) to offset its carbon dioxide (CO₂) emissions under the Kyoto Protocol. However, relatively little attention has been given so far to associated changes in trace gas fluxes. Here, we measure methane (CH₄) fluxes and CO₂ production, as well as microbial C, nitrogen (N) and mineral-N, in intact, gradually dried (ca. 2 months at 20 °C) cores of a volcanic soil and a heavier textured, non-volcanic soil collected within plantations of Pinus radiata D. Don (pine) and adjacent permanent pastures. CH₄ fluxes and CO₂ production were also measured in cores of another volcanic soil under reverting shrubland (mainly Kunzea var. ericoides (A. Rich) J. Thompson) and an adjacent pasture. CH₄ uptake in the pine and shrubland cores of the volcanic soils at field capacity averaged about 35 and 14 μg CH₄-C m⁻² h⁻¹, respectively, and was significantly higher than in the pasture cores (about 21 and 6 μg CH₄-C m⁻² h⁻¹, respectively). In the non-volcanic soil, however, CH₄-C uptake was similar in most cores of the pine and pasture soils, averaging about 7-9 μg m⁻² h⁻¹, except in very wet samples. In contrast, rates of CO₂ production and microbial C and N concentrations were significantly lower under pine than under pasture. In the air-dry cores, microbial C and N had declined in the volcanic soil, but not in the non-volcanic soil; ammonium-N, and especially nitrate-N, had increased significantly in all samples. CH₄ uptake was, with few exceptions, not significantly influenced by initial concentrations of ammonium-N or nitrate-N, nor by their changes on air-drying. A combination of phospholipid fatty acid (PLFA) and stable isotope probing (SIP) analyses of only the pine and pasture soils showed that different methanotrophic communities were probably active in soils under the different vegetations. The C18 PLFAs (type II methanotrophs) predominated under pine and C16 PLFAs (type I methanotrophs) predominated under pasture. Overall, vegetation, soil texture, and water-filled pore space influenced CH₄-C uptake more than did soil mineral-N concentrations.     

Interactions between the arbuscular mycorrhizal fungus Glomus intraradices and the plant growth promoting rhizobacteria Paenibacillus polymyxa and P. macerans in the mycorrhizosphere of Cucumis sativus

Interactions between the arbuscular mycorrhizal (AM) fungus Glomus intraradices and bacteria from the genus Paenibacillus (P. macerans and P. polymyxa) were examined in a greenhouse pot experiment with Cucumis sativus with and without organic matter amendment (wheat bran). P. polymyxa markedly suppressed AM fungus root colonization irrespective of wheat bran amendment, whereas P. macerans only suppressed AM fungus root colonization in combination with wheat bran amendment. Dual inoculation with P. macerans and G. intraradices in combination with wheat bran amendment also caused severe plant growth suppression. Inoculation with G. intraradices was associated with increased levels of dehydrogenase activity and available P in the growth substrate suggesting that mycorrhiza formation accelerated the decomposition of organic matter resulting in mobilization of phosphorus. Inoculation with both Paenibacillus species increased all measured microbial fatty acid biomarkers in the cucumber rhizosphere, except for the AM fungus biomarker 16:1ω5, which was reduced, though not significantly. Similarly, inoculation with G. intraradices increased all measured microbial fatty acid biomarkers in the cucumber rhizosphere, except for the Gram-positive bacteria biomarker 15:0 anteiso, which was overall decreased by G. intraradices inoculation. In combination with wheat bran amendment G. intraradices inoculation caused a 39% reduction in the amount of 15:0 anteiso in the treatment with P. polymyxa, suggesting that G. intraradices suppressed P. polymyxa in this treatment. In conclusion, plant growth promoting species of Paenibacillus may have suppressive effects of AM fungi and plant growth, especially in combination with organic matter amendment. The use of an inert plant growth media in the present study allowed us to study rhizosphere microbial interactions in a relative simple substrate with limited interference from other soil biota. However, the results obtained in the present work mainly show potential interactions and should not be directly extrapolated to a soil situation.     

Interaction between the soil yeast Rhodotorula mucilaginosa and the arbuscular mycorrhizal fungi Glomus mosseae and Gigaspora rosea

The effect of the soil yeast, Rhodotorula mucilaginosa LBA, on Glomus mosseae (BEG n°12) and Gigaspora rosea (BEG n°9) was studied in vitro and in greenhouse trials. Hyphal length of G. mosseae and G. rosea spores increased significantly in the presence of R. mucilaginosa. Exudates from R. mucilaginosa stimulated hyphal growth of G. mosseae and G. rosea spores. Increase in hyphal length of G. mosseae coincided with an increase in R. mucilaginosa exudates. No stimulation of G. rosea hyphal growth was detected when 0.3 and 0.5 ml per petri dish of yeast exudates was applied. Percentage root length colonization by G. mosseae in soybean (Glycine max L. Merill) and by G. rosea in red clover (Trifolium pratense L. cv. Huia) was increased only when the soil yeast was inoculated before G. mosseae or G. rosea was introduced. Beneficial effects of R. mucilaginosa on arbuscular mycorrhizal (AM) colonization were found when the soil yeast was inoculated either as a thin agar slice or as a volume of 5 and 10 ml of an aqueous solution. R. mucilaginosa exudates (20 ml per pots) applied to soil increased significantly the percentage of AM colonization of soybean and red clover.     

Polysaccharides and monosaccharides in the hyphosphere of the arbuscular mycorrhizal fungi Glomus E3 and Glomus tenue

 Plants colonised with the arbuscular mycorrhizal fungi (AMF) Glomus E3 and Glomus tenue were grown in microcosms that permitted separation into root:hyphae and hyphae compartments. Hydrolysed polysaccharides from the hyphae and water-soluble sugars released into the hyphosphere were assayed using chromatography. Total sugars and most monosaccharides were elevated in the hyphosphere of Glomus E3 but not in the hyphosphere of G. tenue. Differences in the levels of sugars did not depend on hyphal surface area. It is suggested the diversity in sugars produced in the hyphosphere of AMF may drive some of the spatial and temporal variation in microbial diversity and function in soils.     

Plant growth-promoting bacterium Pseudomonas sp. strain GRP3 influences iron acquisition in mung bean (Vigna radiata L. Wilzeck)

Siderophores produced by Pseudomonas sp. may be used by the bacteria (homologously) or in effecting plant nutrition (heterologously). The problem of iron non-availability particularly in calcareous soils may be overcome by incorporation of siderophore producing strains of fluorescent psuedomonads (FLPs). Siderophore producing bacterium Pseudomonas strain GRP₃ was used in a pot experiment to assess the role of microbial siderophores in the iron nutrition of mung bean (Vigna radiataL. Wilzeck) using Fe-citrate, Fe-EDTA and Fe(OH)₃ in different concentrations with Hoagland's solution. After 45 days, the plants showed a reduction of chlorotic symptoms and enhanced chlorophyll level in GRP₃ bacterized plants. Bacterization with GRP₃ increased peroxidase activity and lowered catalase activity in roots. In 10 μM Fe-citrate alongwith GRP₃ treatment, chlorophyll a, chlorophyll b and total chlorophyll contents increased significantly by 34, 48 and 39%, respectively, compared to the control. Peroxidase activity in the same treatment was increased by 82% whereas catalase activity decreased by 33%. There was also a significant increase in total and physiologically available iron. A closely similar pattern was observed in chlorophyll content and peroxidase activity in Fe-EDTA and Fe(OH)₃ treated plants; catalase activity was an exception. The data suggests operation of heterologous siderophore uptake system in mung bean in presence of GRP₃. Such siderophore producing system has the potential of improving iron availability to plants and reduce fertilizer usage.     

Distribution of monoterpenes between organic resources in upper soil horizons under monocultures of Picea abies, Picea sitchensis and Pinus sylvestris

The aim of this study was to compare the monoterpene content and distribution in litters and roots of three conifer species: Picea abies (L.) Karst, Picea sitchensis (Bong.) Carr. and Pinus sylvestris (L.). We analysed the monoterpene content of green needles, needle litter, F (fermentation) layer material and roots collected from monoculture plots. The rate of loss of monoterpenes from freshly fallen litter in the field was also studied at two monthly intervals over 10 months, to assess the length of time that monoterpenes entering the litter layer remain. Monoterpene analysis was carried out by extracting homogenised samples in hexane and identifying and quantifying the resulting monoterpenes using gas chromatography with flame ionisation detection (GC-FID) and gas chromatography-mass spectrometry (GC-MS). Mean total monoterpene concentrations varied significantly between the three species examined (e.g. in freshly fallen litter 1531 ± 96, 100 ± 5 and 1175 ± 122 μg g⁻¹ d. wt for P. abies, P. sitchensis and P. sylvestris); each species had distinctive and consistent monoterpene profiles associated with each type of tissue, and total monoterpene concentrations in green needles varied between individual trees of the same species, particularly for P. sitchensis. A substantial proportion of the monoterpene content of green needles remained in the needles after litter fall for P. abies (42%), P. sitchensis (11%) and P. sylvestris (30%). Although rates of monoterpene loss from needle litters varied initially (P. sylvestris > P. abies > P. sitchensis), the majority of the monoterpene content was lost after 4-6 months. Maximum monoterpene emission rates from decaying litter were calculated of 39 (P. abies), 1.7 (P. sitchensis) and 39 μg m⁻² h⁻¹ (P. sylvestris). Monoterpene concentrations in F layer material were very low (<10 μg g⁻¹ d. wt). Roots, particularly in P. sylvestris, represented a significant pool of monoterpenes (185 ± 16, P. abies; 258 ± 54, P. sitchensis; 2133 ± 200 μg g⁻¹ d. wt, P. sylvestris). The monoterpene profile was similar between roots and litter of P. sylvestris (α-pinene most abundant), and for P. sitchensis, (limonene and α-pinene most abundant), although a different pattern was observed between needle litter (most abundant β-pinene) and roots (most abundant myrcene) of P. abies. The relatively high concentrations and different profiles of monoterpenes characterised in upper organic soil horizons here emphasise the need for their influence on soil ecological processes to be assessed.     

Habitat moisture availability and the local distribution of the Antarctic Collembola Cryptopygus antarcticus and Friesea grisea

Population densities of the Collembola Cryptopygus antarcticus and Friesea grisea were compared in two maritime Antarctic habitats with different moisture availability. C. antarcticus was absent from the drier rock platform habitat, where F. grisea was the only collembolan collected. In contrast, the sand/pebble habitat on East Beach had greater moisture availability, and C. antarcticus dominated the arthropod community, with juveniles (individuals <1 mm length) representing 58% of the population. The hygropreference characteristics of F. grisea were determined in relative humidity (RH) gradients (12-98% RH) at 10 and 20 °C. F. grisea demonstrated a stronger preference for 98% RH conditions than C. antarcticus, suggesting that the former species is less likely to vacate moist refuges when available. The movement of both species was also monitored at 10 and 15 °C under conditions of 33, 75 and 100% RH. C. antarcticus was more active than F. grisea at both temperatures, and its movement increased at a greater rate as a consequence of reduced RH. The limited desiccation tolerance of C. antarcticus, combined with the increased water loss that would result from its continued movement under declining RH conditions, suggests this species is not well suited to drought-prone environments. In contrast, the reduced movement and ‘risk averse’ behavioural strategy of F. grisea, i.e. taking advantage of moist refuges when available, facilitates water conservation between precipitation/habitat rehydration events. This study provides the first evidence that moisture availability and habitat structure are potential habitat segregation mechanisms between these two Antarctic Collembola.     

Inorganic sulphur nutrition of the vesicular-arbuscular mycorrhizal fungus Glomus caledonium

Hyphal growth from germinated spores of Glomus caledonium was stimulated in the presence of thiosulphate, metabisulphite, sulphite and sulphate. The largest effects were observed with sulphite and metabisulphite which gave 17- and 11-fold increases respectively at their optimum concentrations. Since no greater incorporation of radioactivity into the spores was observed from ³⁵S-sulphite than from ³⁵S-sulphate it was not possible to conclude how this effect was mediated.