Nematode dispersion by runoff water: Case study of Radopholus similis (Cobb) Thorne on nitisol under humid tropical conditions

To minimize application of nematicides in banana fields, crop systems have been developed in the French West Indies that combine fallow or rotation crops and nematode-free in vitro plants. After two to four years, populations of the burrowing nematode Radopholus similis have developed enough to cause economic losses, leading banana growers to use nematicides. To understand how banana fields are recontaminated, we studied the dissemination of R. similis by water flow. At a 1-m scale, we analyzed the dispersion of R. similis under a rainfall simulator: we isolated a 1-m² study plot, placed a R. similis suspension on the upstream soil surface, and simulated a 60 mm/h rainfall for 72 min. We collected soil samples every 10 cm downstream after 12 min of rainfall, and subsequently at 20-min intervals, and extracted the nematodes using a Seinhorst elutriator and then a Baermann funnel. Our results showed that the nematode dissemination follows an inverse exponential law, and depends more on soil moisture at the beginning of rainfall than on the length of rainfall: in fresh soil, 69–80% of the R. similis recovered were found less than 10 cm downstream from the nematode inoculation line, whereas in wetted soil, 76–85% of the recovered individuals were collected in the outlet tub located downstream from the apparatus. This passive dissemination model partially explains the distance covered by individual nematodes but not the low percentage of motile nematodes recovered in the outlet tub (10% and 36% in fresh and wet soils) compared to the percentage of motile nematodes found in the soil (80% and 84% in fresh and wet soils). Indeed, water runoff is likely to disseminate R. similis over long distances only when soil moisture is close to field capacity.     

Carbon loss by sclerotia of Sclerotium rolfsii under the influence of soil pH,temperature and matric potential and its effect on sclerotial germination and virulence

Germinability and virulence of sclerotia of Sclerotium rolfsii were assessed after 50 days of exposure of ¹⁴C-labeled sclerotia to soil at 0, −5 and −15 kPa and pH 6.9, or to soil at 15, 25 or 30 °C, pH 5 or 8 and −1 kPa. Evolution of ¹⁴CO₂ accounted for the greatest share of endogenous carbon loss from sclerotia under all soil conditions, except in water-saturated soil (0 kPa), in which sclerotial exudates contributed the major share of carbon loss. Total evolution of ¹⁴CO₂ from sclerotia in soil at −15 kPa (42.4% of total ¹⁴C) and at −5 kPa (38%) was significantly higher than at 0 kPa (23.8%). Evolution of ¹⁴CO₂ in soil at 25 or 30 °C was more rapid than at 15 °C with regardless of pH. Loss of endogenous carbon by sclerotia was the greater after 50 days of exposure to soil at 0 kPa, or at 25 or 30 °C and pH 8, than at other soil conditions. Sclerotia exposed to water-saturated soil (0 kPa) showed a more rapid decline in nutrient independent germinability, viability and virulence, than to those exposed to −5 or −15 kPa. Sclerotia became dependent on nutrient for germination and lost viability and virulence within 30–40 days in soil at 25 or 30 °C, pH 8. However, more than 60% of sclerotia retained viability in soil at 15 °C regardless of pH, even after 50 days. Radish shoot growth was increased significantly by the sclerotia that had been exposed to soil at 0 kPa, or to soil at 25 or 30 °C and pH 8 for 50 days. In conclusion, carbon loss by sclerotia during incubation on soil at different pH levels, temperatures and water potentials was inversely correlated with sclerotial ability to infect radish seedlings. The relationship between carbon loss by sclerotia and radish shoot length was positive.     

Soil moisture effects on infectivity and persistence of the entomopathogenic nematodes Steinernema scarabaei,S. glaseri,Heterorhabditis zealandica,and H. bacteriophora

We tested the effect of soil moisture on the performance of four entomopathogenic nematodes species that have recently shown promise for the control of white grubs, i.e., Heterorhabditis bacteriophora, H. zealandica, Steinernema scarabaei, and S. glaseri. Experiments for all four nematodes were conducted in sandy loam, for S. scarabaei also in loamy sand and silt loam. Infectivity was tested by exposing third-instar Japanese beetle, Popillia japonica, to nematodes in laboratory experiments and determining nematode establishment in the larvae and larval mortality. Nematode infectivity was the highest at moderate soil moistures (−10 to −100 kPa), and tended to be lower in wet (−1 kPa) and moderately dry (−1000 kPa) soil. In dry soil (−3000 kPa), only S. scarabaei showed some activity. S. scarabaei was active from −1 to −3000 kPa in all soil types but the range of highest activity was wider in loamy sand (−1 to −1000 kPa) than in loamy sand and silt loam (−10 to −100 kPa). Persistence was determined in laboratory experiments by baiting nematode-inoculated soil with larvae of the greater wax moth, Galleria mellonella. For both Heterorhabditis spp. persistence was short at −10 kPa, improved slightly at −100 kPa, significantly at −1000 kPa, and was the highest at −3000 kPa. Both Steinernema spp. persisted very well at −10 kPa. However, S. glaseri persistence was the shortest at −10 kPa but did not differ significantly at −100 to −3000 kPa, whereas S. scarabaei persistence was not affected by soil moisture. Our observations concur with previous observations on the effect of soil moisture on entomopathogenic nematodes but also show that moisture ranges for infectivity and persistence vary among species. Differences among species may be based on differences in size and behavioral and physiological adaptations.     

Effect of warming on the temperature dependence of soil respiration rate in arctic,temperate and tropical soils

We examined the response of the temperature coefficient (Q₁₀) for soil respiration rate to changes in environmental temperature through a laboratory incubation experiment. Soil samples were collected from three climatic areas: arctic (Svalbard, Norway), temperate (Tsukuba, Japan) and tropical (Pasoh, Malaysia). The arctic and temperate soils were incubated at 8 °C (control), 12 °C (4 °C warming) and 16 °C (8 °C warming) for 17 days. The tropical soil was incubated at 16 °C (8 °C cooling), 24 °C (control) and 32 °C (8 °C warming). Before and after the incubation experiment, the temperature dependence of soil microbial respiration was measured using an open-airflow method with IRGA by changing the temperature in a water bath. The initial Q₁₀ before the incubation experiment was larger in the soils from higher latitudes: 3.4 in the arctic soil, 2.9 in the temperate soil, and 2.1 in the tropical soil. The response of the microbial respiration rate to change in temperature differed among the three soil types. The temperature dependence of respiration rate in the arctic soil did not change in response to warming by 4 and 8 °C with a Q₁₀ of about 3. On the other hand, the Q₁₀ in the temperate soil decreased with increasing incubation temperature: from 2.8 in soils incubated at 8 °C to 2.5 at 12 °C and 2.0 at 16 °C. In the tropical soil, the Q₁₀ was not changed even by the 8 °C warming with a value of 2.1, whereas the Q₁₀ was increased from 2.1 to 2.7 by the 8 °C cooling. These results suggest that the response of microbial respiration to climatic warming may differ between soils from different latitudes.     

Detection and quantification of the nematophagous fungus Hirsutella minnesotensis in soil with real-time PCR

A real-time PCR assay was developed to quantify in soil the fungus Hirsutella minnesotensis, an important parasite of secondary-stage juvenile (J2) of the soybean cyst nematode. A primer pair 5′-GGGAGGCCCGGTGGA-3′ and 5′-TGATCCGAGGTCAACTTCTGAA-3′ and a TaqMan probe 5′-CGTCCGCCGTAAAACGCCCAAC-3′ were designed based on the sequence of the ITS region of the rRNA gene. The primers were highly species-specific. The PCR reaction system was very sensitive and able to detect as few as 4 conidia g^?1 soil. Regression analysis showed similar slopes and efficiency on DNA from pure culture (y = ?3.587x + 41.017, R² = 0.9971, E = 0.9055) and from Log conidia g^?1 soil (y = ?3.855x + 37.669, R² = 0.9139, E = 0.8172), indicating that the real-time PCR protocol can reliably quantify H. minnesotensis in the soil. The real-time PCR assay was applied to 20 soil samples from soybean fields, and compared with a parasitism assay. The real-time PCR assay detected H. minnesotensis in six of the soils, whereas the parasitism assay detected H. minnesotensis in the same six soils and three additional soils. The real-time PCR assay was weakly correlated (R² = 0.49) with the percentage of parasitized J2 in the six soils, indicating that different types of soil may interfere the efficiency of the real-time PCR assay, possibly due to the effect of soil types on efficacy of DNA extraction. The parasitism assay appeared to be more sensitive than real-time PCR in detecting presence of H. minnesotensis, but real-time PCR was much faster and less costly and provided a direct assessment of fungal biomass. Using the two assays in combination can obtain more complete information about the fungus in soil than either assay alone. Hirsutella parasitism was widespread and detected in 13 of the 20 field soils, indicating that these fungi may contribute to suppressiveness of soybean cyst nematode in nature and likely have high biological control potential for the nematode.     

Improved soil structure and citrus growth after inoculation with three arbuscular mycorrhizal fungi under drought stress

In a controlled potted experiment, citrus (Poncirus trifoliata) seedlings were inoculated with three species of arbuscular mycorrhizal (AM) fungi, Glomus mosseae, G. versiforme or G. diaphanum. Two soil-water levels (ample water, −0.10 MPa; drought stress, −0.44 MPa) were applied to the pots 4 months after transplantation. Eighty days after water treatments, the soils and the citrus seedlings were well colonized by the three AM fungi. Mycorrhizal fungus inoculation improved plant biomass regardless of soil-water status but decreased the concentrations of hot water-extractable and hydrolyzable carbohydrates of soils. Mycorrhizal soils exhibited higher Bradford-reactive soil protein concentrations than non-mycorrhizal soils. Mycorrhizas enhanced >2 mm, 1–2 mm and >0.25 mm water-stable aggregate fractions but reduced 0.25–0.5 mm water-stable aggregates. Peroxidase activity was higher in AM than in non-AM soils whether drought stressed or not, whereas catalase activity was lower in AM than non-AM soils. Drought stress and AM fungus inoculation did not affect polyphenol oxidase activity of soils. A positive correlation between the Bradford-reactive soil protein concentrations, soil hyphal length densities, and water-stable aggregates (only >2 mm, 1–2 mm and >0.25 mm) suggests beneficial effects of the AM symbiosis on soil structure. It concluded that AM fungus colonization enhanced plant growth under drought stress indirectly through affecting the soil moisture retention via glomalin's effect on soil water-stable aggregates, although direct mineral nutritional effects could not be excluded.     

Impact of bovine urine deposition on soil microbial activity,biomass, and community structure

Nitrogen (N) from urine excreted by grazing animals can be transformed into N compounds that have detrimental effects on the environment. These include nitrate, which can cause eutrophication of waterways, and nitrous oxide, which is a greenhouse gas. Soil microbes mediate all of these N transformations, but the impact of urine on microbes and how initial soil conditions and urine chemical composition alter their responses to urine are not well understood. This study aimed to determine how soil inorganic N pools, nitrous oxide fluxes, soil microbial activity, biomass, and the community structure of bacteria containing amoA (nitrifiers), nirK, and nirS (denitrifiers) genes responded to the addition of urine over time. Bovine urine containing either a high (15.0 g K⁺ l^?1) or low salt content (10.4 g K⁺ l^?1) was added to soil cores at either low or high moisture content (hereafter termed dry and wet soil respectively; 35% or 70% water-filled pore space after the addition of urine). Changes in soil conditions, inorganic N pools, nitrous oxide fluxes, and the soil microbial community were then measured 1, 3, 8, 15, 29 and 44 days after urine addition. Urine addition increased soil ammonium concentrations by up to 2 mg g d.w.^?1, soil pH by up to 2.7 units, and electrical conductivity (EC) by 1.0 and 1.6 dS m^?1 in the low and high salt urine treatments respectively. In response, nitrate accumulation and nitrous oxide fluxes were lower in dry compared to wet urine-amended soils and slightly lower in high compared to low salt urine-amended soils. Nitrite concentrations were elevated (>3 μg g d.w.^?1) for at least 15 days after urine addition in wet urine-amended soils, but were only this high in the dry urine-amended soils for 1 day after the addition of urine. Microbial biomass was reduced by up to half in the wet urine-amended soils, but was largely unaffected in the dry urine-amended soils. Urine addition affected the community structure of ammonia-oxidising and nitrite-reducing bacteria; this response was also stronger and more persistent in wet than in dry urine-amended soils. Overall, the changes in soil conditions caused by the addition of urine interacted to influence microbial responses, indicating that the effect of urine on soil microbes is likely to be context-dependent.     

Response of microbial characteristics to heavy metal pollution of mining soils in central Tibet,China

Soil microbial activity plays a crucial role in soil microbiological processes, which can be used as a useful indicator to determine the ecological effects of heavy metal pollution on soils. The objective was to determine the effects of heavy metal pollution on mining soils at the Lawu mine of central Tibet, China on soil enzyme activities (sucrase, urease and acid phosphatase), microbial biomass C, N and P (MBC, MBN, and MBP), basal respiration, metabolic quotients, and N mineralization. Sixteen soil samples around the mine were sampled, and one soil sample, 2 km from the mine center, was taken as the control. Compared to the control, mining soils were polluted by heavy metals, Cu, Zn, Pb and Cd, resulting in decreases of sucrase activities, urease activities, acid phosphatase activities, MBC, MBN, MBP, and N mineralization, and increases of basal respiration and qCO₂. Multivariate analysis (cluster analysis [CA], principle component analysis [PCA] and canonical correlation analysis [CCA]) indicated nine microbial variables were only reduced to one principal component explaining 72% of the original variances, and MBC (R² = 0.93) had the highest positive loadings on the principal component. Mining soils polluted by heavy metals were perfectly clustered into four groups, which were highly distinguished by MBC. There were significant canonical correlations between soil heavy metals and microbial indexes on two canonical variates (R1 = 0.99, p < 0.001; R2 = 0.97, p < 0.01), which further demonstrated significant correlations between soil heavy metal contents and microbial characteristics. Hence, our results suggested that MBC may be used a sensitive indicator for assessing changes in soil environmental quality in metal mine of central Tibet.     

Survival and persistence of genetically modified Sinorhizobium meliloti in soil

Studies were conducted to evaluate the survival and persistence of Sinorhizobium meliloti 104A14 and two acid phosphatase-negative mutants in Kirkland (fine, mixed, thermic Udertic Paleustolls) silt loam soils with various fertility levels, and to assess the impact of inoculation on nodule occupancy and soil microbial community structure in the inoculated alfalfa (Medicago sativa L.) rhizosphere. Recovery of the inoculated strains was 100% (in the order of 10⁸ cells g⁻¹ soil) immediately following inoculation to soils, but decreased from 10⁸ cells g⁻¹ soil to undetectable levels in a nutrient-poor soil within 32 days. In a nutrient-rich soil, approximately 2–3% (4.7–7.43×10⁶ cells g⁻¹ soil) of the mutants and 23% (5.84×10⁷ cells g⁻¹ soil) of the wild-type inocula persisted for more than 64 days. Survivability and persistence of the wild-type S. meliloti were significantly greater than that of the genetically modified acid phosphatase negative mutants in all the soils tested. The persistence and nodule occupancy of the introduced S. meliloti in sterile and non-sterile soils were also tested for two repeated alfalfa growth periods in the same plant growth units, with a 1 month interval in between and no additional inoculation for the second period. Nodule occupancy of the introduced S. meliloti in non-sterile soils ranged from 30 to 60% for the first period and 85 to 100% for the second period. Our results suggest that survival and persistence of S. meliloti was enhanced by alfalfa cultivation and increased soil fertility, but impaired by mutation of acid phosphatase genes regardless of phosphorus nutritional levels. Moreover, inoculation with genetically modified S. meliloti strain 104A14 promoted indigenous bacterial growth in soil (increased bacterial population from 1.4×10⁶ to 4.3×10⁶ cells g⁻¹ soil), but not the growth of fungi and yeast. However, inoculation of the wild-type S. meliloti or genetically modified mutants did not result in significant changes in microbial community structure as indicated by EP indices and ratios of r/K strategists.     

Dynamics of litter carbon turnover and microbial abundance in a rye detritusphere

Factors determining C turnover and microbial succession at the small scale are crucial for understanding C cycling in soils. We performed a microcosm experiment to study how soil moisture affects temporal patterns of C turnover in the detritusphere. Four treatments were applied to small soil cores with two different water contents (matric potential of ?0.0063 and ?0.0316 MPa) and with or without addition of ¹³C labelled rye residues (δ¹³C=299‰), which were placed on top. Microcosms were sampled after 3, 7, 14, 28, 56 and 84 days and soil cores were separated into layers with increasing distance to the litter. Gradients in soil organic carbon, dissolved organic carbon, extracellular enzyme activity and microbial biomass were detected over a distance of 3 mm from the litter layer. At the end of the incubation, 35.6% of litter C remained on the surface of soils at ?0.0063 MPa, whereas 41.7% remained on soils at ?0.0316 MPa. Most of the lost litter C was mineralised to CO₂, with 47.9% and 43.4% at ?0.0063 and ?0.0316 MPa, respectively. In both treatments about 6% were detected as newly formed soil organic carbon. During the initial phase of litter decomposition, bacteria dominated the mineralisation of easily available litter substrates. After 14 days fungi depolymerised more complex litter compounds, thereby producing new soluble substrates, which diffused into the soil. This pattern of differential substrate usage was paralleled by a lag phase of 3 days and a subsequent increase in enzyme activities. Increased soil water content accelerated the transport of soluble substrates, which influenced the temporal patterns of microbial growth and activity. Our results underline the importance of considering the interaction of soil microorganisms and physical processes at the small scale for the understanding of C cycling in soils.     

Improving soil structure by promoting fungal abundance with organic soil amendments

Building soil structure in agroecosystems is important because it governs soil functions such as air and water movement, soil C stabilization, nutrient availability, and root system development. This study examined, under laboratory conditions, effects of organic amendments comprised of differing proportions of labile and semi-labile C on microbial community structure and macroaggregate formation in three variously textured soils where native structure was destroyed. Three amendment treatments were imposed (in order of increasing C lability): vegetable compost, dairy manure, hairy vetch (Vicia villosa Roth). Formation of water stable macroaggregates and changes in microbial community structure were evaluated over 82 days. Regardless of soil type, formation of large macroaggregates (LMA, >2000 μm diameter) was highest in soils amended with vetch, followed by manure, non-amended control, and compost. Vetch and manure had greater microbially available C and caused an increase in fungal biomarkers in all soils. Regression analysis indicated that LMA formation was most strongly related to the relative abundance of the fungal fatty acid methyl ester (FAME) 18:2ω6c (r = 0.55, p < 0.001), fungal ergosterol (r = 0.58, p < 0.001), and microbial biomass (r = 0.57, p < 0.001). Non-metric multidimensional scaling (NMS) ordination of FAME profiles revealed that vetch and manure drove shifts toward fungal-dominated soil microbial communities and greater LMA formation in these soils. This study demonstrated that, due to their greater amounts of microbially available C, vetch or manure inputs can be used to promote fungal proliferation in order to maintain or improve soil structure.     

Litter quality effects on soil carbon and nitrogen dynamics in temperate alley cropping systems

Microcosm and litterbag experiments were conducted to determine the effects of litter quality, soil properties and microclimate differences on soil carbon (C) and nitrogen (N) mineralization in alley cropping systems. Bulk soils were collected from 0 to 20 cm depth at three sites: a 21-year old pecan (Carya illinoinensis)/bluegrass (Poa trivialis) intercrop (Pecan site) in north-central Missouri, a 12-year old silver maple (Acer saccharinum)/soybean (Glycine max)–maize (Zea mays) rotation (Maple site) in northeastern Missouri and a restored prairie site (MDC site) in southwestern Missouri. Seven tree and crop litters with varying composition were collected, including pecan, silver maple, chestnut and walnut leaf litter (tree litter) and maize, soybean and bluegrass residues (crop litter). Aerobic microcosm incubations were maintained at 25 °C and a soil water potential of −47 kPa. Unamended MDC soil mineralized 24 and 18% more CO₂ than the Pecan and Maple soils, respectively. Soil amended with crop litter mineralized on average 32% more CO₂ than when amended with tree litter. Net N mineralization from soybean litter was 40 mg kg⁻¹, while all other litter immobilized N for various durations. A double pool and a single pool model best described C and N mineralization from amended soils, respectively. Cumulative CO₂ mineralized, labile C fraction (C₁) and potentially mineralizable C (C₀) were correlated to litter total N and lignin contents and to (lignin + polyphenol):N ratio. In the field, bluegrass litter decomposed and released N twice as fast as pecan leaf litter. Soybean, maize and silver maple litter released 84, 75 and 63% of initial N, respectively, 308 days after field placement, while no differences in mass loss was observed among the three litter materials. At the Maple site, mass and N remaining, 308 days after field placement was lower at the middle of the alley, corresponding to higher soil temperature and water content. No differences in mass loss and N release patterns were observed at the Pecan site. Microclimate and litter quality effects can lead to differences in nutrient availability in alley cropping systems.     

The temperature dependence of dicyandiamide (DCD) degradation in soils: A data synthesis

Dicyandiamide (DCD, C₂H₄N₄) is a nitrification inhibitor that has been studied for more than 80 years. However, there are few papers that have examined the use of DCD on dairy farms where cattle graze pasture and where urine is the primary form of nitrogen (N) deposited onto soils. After DCD was applied (10 kg DCD ha^?1) with bovine urine (700–1200 kg N ha^?1) to five soils throughout New Zealand, the reduction in direct nitrous oxide (N₂O) emissions was significant and remarkably consistent (71 ± 8%, average ± standard error). The application of DCD to these soils occurred in autumn and winter; daily average soil temperature (T) was reported but these data were not further analysed. Perusal of the literature suggested no consensus on the temperature dependence of DCD degradation in soils. Based on published data from controlled-environment studies of soils sampled in four countries, we quantified the relation between T and the time for DCD concentration in soils to decline to half its application value (t_½) as t_½ (T) = 168e^?0.084T with parameter standard errors of ±16 d and ±0.011 d^?1, respectively (n = 16). For example, at 5 °C a 1 °C increase in T reduced t_½ from 110 to 101 d whereas at 25 °C the reduction was 20–19 d. Analysing T data from the New Zealand trials using our t_½ (T) function, over 43–89 d when direct N₂O emissions from treated plots became indistinguishable from the controls, the estimated percentage of applied DCD remaining in the soil averaged 43 ± 10%. These calculations suggested the apparently remaining DCD was ineffective with respect to direct N₂O emissions. In the absence of measurements, explanations for this interpretation included vertical displacement of the DCD and sorption onto organic matter in soils. The consistent DCD efficacy from these trials corresponded with T generally <10 °C, so it is suggested as an application criteria for the reduction of direct N₂O emissions from pastoral soils subjected to urine excretion by grazing cattle.     

Cultivation effects on temporal changes of organic carbon and aggregate stability in desert soils of Hexi Corridor region in China

Sustainable agricultural use of cultivated desert soils has become a concern in Hexi Corridor in Gansu Province of China, because loss of topsoil in dust storms has been recently intensified. We chose four desert sites to investigate the effects of cultivation (cropping) on (i) soil organic C and its size fractions and (ii) soil aggregate stability (as a measure of soil erodibility). These parameters are of vital importance for evaluating the sustainability of agricultural practices.Total organic C as well as organic C fractions in soil (coarse organic C, 0.1–2 mm; young organic C, 0.05–0.1 mm; stable organic C, <0.05 mm) generally increased with the duration of the cultivation period from 0 (virgin soil, non-cultivated) to more than 30 years (p < 0.05). Compared to total organic C in virgin soils (2.3–3.5 g kg⁻¹ soil), significantly greater values were found after 10 to >20 years of cultivation (6.2–7.1 g kg⁻¹ soil). The increase in organic C in desert soils following prolonged cultivation was mainly the consequence of an increase in the coarse organic C. The increase in total organic C in soil was also dependent on clay content [total organic C = 0.96 + 0.249 clay content (%) + 0.05 cultivation year, R² = 0.48, n = 27, p < 0.001]. This indicates that clay protected soil organic C from mineralization, and also contributed to the increase in soil organic C as time of cultivation increased.There was a significant positive correlation between aggregate stability and total organic C across all field sites. The water stability of aggregates was low (with water-stable aggregate percentage ∼4% of dry-sieved aggregates of size 1–5 mm). There was no consistent pattern of increase in the soil aggregate stability with time of cultivation at different locations, suggesting that desert soils might remain prone to wind erosion even after 50 years of cultivation. Alternative management options, such as retaining harvested crop residues on soil surface and excluding or minimizing tillage, may permit sustainable agricultural use of desert soils.     

Nitrogen mineralization in the ruderal sub-alpine communities in Mount Uludağ, Turkey

Nitrogen mineralization and nitrification in the soil of sub-alpine ruderal community of Mount Uludağ, Bursa, Turkey was measured for 1 year, under field conditions with Verbascum olympicum and Rumex olympicus being the dominant pioneer species under dry and wet sites, respectively. Seasonal fluctuations were observed in N mineralization and nitrification. The net N mineralization and nitrification were high in early summer and winter, due to high moisture. The annual net N mineralization rate (for the 0–15 cm soil layer) was higher under R. olympicus (188 kg N ha⁻¹ yr⁻¹) than under V. olympicum (96 kg N ha⁻¹ yr⁻¹). A significant positive correlation between net N mineralization and soil organic C (r² = 0.166), total N (r² = 0.141) and water content (r² = 0.211) was found. Our results indicate that N mineralization rate is high in soils of ruderal communities on disturbed sites and varies with dominant species and, a difference in net N mineralization rate can be attributed to organic C, total N and moisture content of soils.     

Respiratory substrate availability plays a crucial role in the response of soil respiration to environmental factors

We examined the response of the temperature coefficient (Q₁₀) for soil respiration to changes in soil temperature and soil moisture through a laboratory incubation experiment. Two types of soils differing in vegetation and moisture status were collected and incubated under two temperatures (10 and 30 °C) and two soil moisture regimes (35 and 75% of water holding capacity, WHC) for 5 weeks. Before and after the incubation experiment, the temperature coefficient of soil respiration was measured using soda-lime method by changing temperature in a water bath. For both soils, the mean Q₁₀ values of the respiration rate were 2.0 in the 30 °C and 2.3 in the 10 °C soil treatments. Higher temperature with lower soil moisture treatment significantly decreased the Q₁₀ value, whereas lower temperature with higher soil moisture treatment significantly enhanced the Q₁₀ value (ANOVA, p < 0.05). These results indicate that soils became less sensitive to temperature when incubated under higher temperature with higher moisture conditions, and more sensitive in lower temperature with higher moisture conditions.There was a significant correlation (r² = 0.67, p < 0.05) between water-soluble carbon (WSC) and soil respiration rate. However, the correlation between soil respiration rate and microbial biomass carbon (MBC) was weak (r² = 0.27, p > 0.05). Although incubation temperature and moisture accounted for 40 and 29% (as r² × 100%), respectively, of variations in Q₁₀, soil water-soluble carbon content alone could have explained 79% of the variation, indicating that the availability of respiratory substrate, rather than the pool of soil microorganisms, played a crucial role in the response of the temperature coefficient to environmental factors. These results suggest that biotic factors should also be taken into consideration when using the Q₁₀ function to predict the response of soil respiration to global warming.     

Enhancement of arbuscular mycorrhizal fungus (Glomus versiforme) on the growth and Cd uptake by Cd-hyperaccumulator Solanum nigrum

Arbuscular mycorrhizal fungus (AMF) can enhance plant growth and resistance to toxicity produced by heavy metals (HMs), affect the bioavailability of HMs in soil and the uptake of HMs by plants, and thus has been emerged as the most prominent symbiotic fungus for contribution to phytoremediation. A greenhouse pot experiment was conducted to assess the effect of Glomus versiforme BGC GD01C (Gv) on the growth and Cd accumulation of Cd-hyperaccumulator Solanum nigrum in different Cd-added soils (0, 25, 50, 100 mg Cd kg⁻¹ soil). Mycorrhizal colonization rates were generally high (from 71% to 82%) in Gv-inoculated treatments at all Cd levels. Gv colonization enhanced soil acid phosphatase activity, and hence elevated P acquisition and growth of S. nigrum at all Cd levels. Moreover, the presence of Gv significantly increased DTPA-extractable (phytoavailable) Cd concentrations in 25 and 50 mg Cd kg⁻¹ soils, but did not affect phytoavailable Cd in 100 mg Cd kg⁻¹ soil. Similarly, inoculation with Gv significantly increased Cd concentrations of S. nigrum in 25 and 50 mg Cd kg⁻¹ soils, but decreased Cd concentrations of the plants in 100 mg Cd kg⁻¹ soil. Overall, inoculation with Gv greatly improved the total Cd uptakes in all plant tissues at all Cd levels. The present results indicated that S. nigrum associated with Gv effectively improved the Cd uptake by plant and would be a new strategy in microbe-assisted phytoremediation for Cd-contaminated soils.     

Soil amendments and watering influence the incidence of endophytic fungi in Amaranthus hybridus in South Africa

A study was conducted to determine the influence of soil amendments and irrigation on the incidence of endophytic fungi in Amaranthus hybridus. Five- and 6-month-old, asymptomatic tissues from A. hybridus were sampled from cultivated plots at Potchefstroom, South Africa in 1997 and 1998, respectively. Soil treatments consisted of the addition of commercial fertilizer or manure to irrigated soils, and wood ash to nonirrigated soils; control plots were neither amended nor irrigated. Ten leaves, 10 petioles, and 10 roots from each of five plants per soil treatment were surface disinfested and small sections from each were placed on corn-meal agar (8000 isolation attempts). After 5 days, the resulting fungal colonies were counted. Significant differences in recovery of fungi occurred among the soil treatments (P < 0.01) and among plant parts (P < 0.01). The highest recovery occurred from the commercial fertilizer and watered treatment (least stressed) for leaves and petioles in both years. Higher fungal recovery also occurred in the wettest year from leaves and petioles for all soil treatments. In contrast, roots yielded higher fungal recovery in the driest year for all soil treatments. These results show that soil attributes can influence frequency of endophytic fungi in both above- and below-ground tissues.     

Accumulation of As,Pb, Zn,Cd and Cu and arbuscular mycorrhizal status in populations of Cynodon dactylon grown on metal-contaminated soils

Metal(loid) accumulation and arbuscular mycorrhizal (AM) status of the dominant plant species, Cynodon dactylon, growing at four multi-metal(loid)s-contaminated sites and an uncontaminated site of China were investigated. Up to 94.7 As mg kg^?1, 417 Pb mg kg^?1, 498 Zn mg kg^?1, 5.8 Cd mg kg^?1 and 27.7 Cu mg kg^?1 in shoots of C. dactylon were recorded. The plant was colonized consistently by AM fungi (33.0–65.5%) at both uncontaminated site and metal-contaminated sites. Based on morphological characteristics, fourteen species of AM fungi were identified in the rhizosphere of C. dactylon, with one belonging to the genus of Acaulospora and the other thirteen belonging to the genus of Glomus. Glomus etunicatum was the most common species associated with C. dactylon growing at metal-contaminated sites. Spore abundance in the rhizosphere of C. dactylon growing at the metal-contaminated soils (22–82 spores per 25 g soil) was significantly lower than that of the uncontaminated soils (371 spores per 25 g soil). However, AM fungal species diversity in the metal-contaminated soils was significantly higher than that in the uncontaminated soils. This is the first report of AM status in the rhizosphere of C. dactylon, the dominant plant survival in metal-contaminated soils. The investigation also suggests that phytorestoration of metal-contaminated sites might be facilitated using the appropriate plant with the aid of tolerant AM fungi.     

Responses of soil dissolved organic matter to long-term plantations of three coniferous tree species

Tree species have significant effects on the availability and dynamics of soil organic matter. In the present study, the pool sizes of soil dissolved organic matter (DOM), potential mineralizable N (PMN) and bio-available carbon (C) (measured as cumulative CO₂ evolution over 63 days) were compared in soils under three coniferous species — 73 year old slash (Pinus elliottii), hoop (Araucaria cunninghamii) and kauri (Agathis robusta) pines. Results have shown that dissolved organic N (DON) in hot water extracts was 1.5–1.7 times lower in soils under slash pine than under hoop and kauri pines, while soil dissolved organic C (DOC) in hot water extracts tended to be higher under slash pine than hoop and kauri pines but this was not statistically significant. This has led to the higher DOC:DON ratio in soils under slash pine (32) than under hoop and kauri pines (17). Soil DOC and DON in 2 M KCl extracts were not significantly different among the three tree species. The DOC:DON ratio (hot water extracts) was positively and significantly correlated with soil C:N (R² = 0.886, P < 0.01) and surface litter C:N ratios (R² = 0.768, P < 0.01), indicating that DOM was mainly derived from litter materials and soil organic matter through dissolution and decomposition. Soil pH was lower under slash pine (4.5) than under hoop (6.0) and kauri (6.2) pines, and negatively correlated with soil total C, C:N ratio, DOC and DOC:DON ratio (hot water extracts), indicating the soil acidity under slash pine favored the accumulation of soil C. Moreover, the amounts of dissolved inorganic N, PMN and bio-available C were also significantly lower in soils under slash pine than under hoop and kauri pines. It is concluded that changes in the quantity and quality of surface litters and soil pH induced by different tree species largely determined the size and quality of soil DOM, and plantations of hoop and kauri pine trees may be better in maintaining long-term soil N fertility than slash pine plantations.