Landscape and local correlates with anuran taxonomic,functional and phylogenetic diversity in rice crops

Context

Deforestation is a major driver of biodiversity loss, mainly due to agriculture. As rice is among the world’s most important crops, determining how agricultural communities are shaped is imperative. However, few studies have addressed the factors that alter community assembly in human-modified landscapes. We aim to quantify taxonomic, functional, trait and phylogenetic diversity of an anuran community from rice crops on a biodiversity hotspot.

Objectives

Identify local and landscape characteristics responsible for variations in multiple dimensions of anuran diversity in rice crops.

Methods

This study was performed in Tocantins, Brazil. We chose 36 lentic waterbodies on rice fields for anuran sampling. We quantified taxonomic diversity (TD), functional diversity (FD) and phylogenetic diversity (PD) for each waterbody. We also estimated the mean functional differences among species for each trait separately. To evaluate how local and landscape scale features affect anurans, we performed generalized linear mixed models in 500, 1000 and 1500 m buffers around each waterbody.

Results

We found increased PD and FD in waterbodies closer to many other waterbodies and large forest patches. Anuran biomass decreased with increasing distance to the closest waterbody. Trait diversity varied with waterbody abundance and closeness, percentage of bare ground and marginal vegetation.

Conclusions

Our study emphasizes the importance of waterbody and forest patch networks for maintaining high anuran FD and PD in agricultural landscapes. As both metrics are known to be related to ecosystem resilience, understanding these patterns is pivotal for biodiversity management, especially in the tropics, where agricultural expansion is unrelenting and biodiversity is especially unique.

     

Landscape composition is the strongest determinant of bird occupancy patterns in tropical forest patches

Context

Biodiversity in tropical region has declined in the last decades, mainly due to forest conversion into agricultural areas. Consequently, species occupancy in these landscapes is strongly governed by environmental changes acting at multiple spatial scales.

Objectives

We investigated which environmental predictors best determines the occupancy probability of 68 bird species exhibiting different ecological traits in forest patches.

Methods.

We conducted point-count bird surveys in 40 forest sites of the Brazilian Atlantic forest. Using six variables related to landscape composition and configuration and local vegetation structure, we predicted the occupancy probability of each species accounting for imperfect detections.

Results

Landscape composition, especially forest cover, best predicted bird occupancy probability. Specifically, most bird species showed greater occupancy probability in sites inserted in more forested landscapes, while some species presented higher occurrence in patches surrounded by low-quality matrices. Conversely, only three species showed greater occupancy in landscapes with higher number of patches and dominated by forest edges. Also, several species exhibited greater occupancy in sites harbouring either larger trees or lower number of understory plants. Of uttermost importance, our study revealed that a minimum of 54% of forest cover is required to ensure high (> 60%) occupancy probability of forest species.

Conclusions

We highlighted that maintaining only 20% of native vegetation in private property according to Brazilian environmental law is insufficient to guarantee a greater occupancy for most bird species. We recommend that policy actions should safeguard existing forest remnants, expand restoration projects, and curb human-induced disturbances to minimise degradation within forest patches.

     

The influence of urbanisation on diversity and trait composition of birds

We analysed the effect of the urban matrix, the urban space surrounding distinct habitat patches, on bird communities. In doing so we assessed the impact of urbanisation beyond the effect of habitat loss. We used a set of 54 wasteland sites of early successional stages that were scattered over the entire urban area of Berlin, Germany. Sites were similar to each other in habitat structure but differed in their surroundings, the urban matrix. Thus, our study design allows to investigate associations between birds and the urban matrix. Our measures for urbanisation are human population density and degree of sealing within 50 to 2,000 m buffer zones surrounding each wasteland site. Along the urbanisation gradients we calculated three measures of bird communities: alpha diversity, beta diversity, and trait profile of the entire bird community regarding food, life-history, and behavioural traits. Alpha diversity did not change significantly along the gradients of urbanisation. However, beta diversity increased along the urbanisation gradients with urbanisation at the local scale (50 m) but decreased at the landscape scale (200 and 2,000 m). Fourth-corner analysis of relationships between urbanisation and species traits showed trait shifts: adult survival rate increased with human population density and densities of birds that are more often reported to show innovative behaviour increased with both human population density and degree of sealing. We conclude that the influence of the urban matrix contributes to the homogenisation of the avifauna by filtering certain species traits and promoting others.     

Environmental correlates of richness,community composition,and functional traits of terrestrial birds and mammals in a fragmented tropical landscape

Landscape Ecology - Tropical forest loss and fragmentation and the associated loss in species diversity are increasing in both magnitude and scope. Much attention has been paid to how attributes of...     

Cemeteries support avian diversity likewise urban parks in European cities: Assessing taxonomic,evolutionary and functional diversity

The aim of this study was to explore different components of avian diversity in two types of urban green areas, parks and cemeteries, in four European countries in relation to environmental characteristics. We studied bird species richness, functional diversity and evolutionary distinctiveness in 79 parks and 90 cemeteries located in four European countries: the Czech Republic, France, Italy and Poland.First, we found no significant differences between cemeteries and parks in bird diversity. However, in both parks and cemeteries, only: two community metrics were affected by different environmental characteristics, including local vegetation structure and presence of human-related structures. Species richness was positively correlated with tree coverage and site size, functional diversity was unrelated to any of the measured variables, while the mean evolutionary distinctiveness score was positively correlated with tree coverage and negatively associated with the coverage of flowerbeds and number of street lamps.Our findings can be useful for urban planning: by increasing tree coverage and site size it is possible to increase both taxonomic richness and evolutionary uniqueness of bird communities. In both parks and cemeteries, the potential association between light pollution and bird species richness was negligible. We also identified some thresholds where bird diversity was higher. Bird species richness was maximized in parks/cemeteries larger than 1.4 ha, with grass coverage lower than 65%. The evolutionary uniqueness of bird communities was higher in areas with tree coverage higher than 45%. In conclusion, the findings of this study provide evidence that cemeteries work similarly than urban parks supporting avian diversity.     

Landscape complementation is a driver of bumble bee (Bombus sp.) abundance in the Canadian Rocky Mountains

Landscape Ecology - Land use change is a major factor influencing biodiversity, but the mechanisms that drive species losses require further examination. Habitat loss often reduces biodiversity,...     

Using habitat extent and composition to predict the occurrence of woodland birds in fragmented landscapes

Landscape Ecology - The removal, alteration and fragmentation of habitat are key causes of biodiversity decline worldwide. In Australia, temperate woodlands have been disproportionately cleared...     

Drivers of spontaneous and cultivated species diversity in the tropical city of Zhanjiang,China

Urban plant diversity influences the social functioning and well-being of urban dwellers. However, the patterns and drivers of plant diversity in tropical urban areas are still not entirely understood. In response to the knowledge deficiencies in this area, we investigated spontaneous and cultivated plant richness and their phylogenetic diversity and relatedness in 260 Urban Functional Units (UFUs), which represented nine different land use types according to anthropogenic function, in the tropical coastal city of Zhanjiang, China. Plant diversity was modelled as a function of UFU characteristics and human maintenance practices. Spontaneous species richness was highest in urban villages and vacant lands and lowest in transportation areas, while phylogenetic diversity was highest in utilities and lowest in parks. In comparison, cultivated species richness was highest in multi-family residential areas and lowest in vacant lands, while phylogenetic diversity of cultivated species was highest in commercial/industry areas and lowest in agriculture areas. The number of cultivated species and the degree of phylogenetic relatedness of spontaneous species were positively correlated with the human population density. The phylogenetic diversity of cultivated species within UFUs was generally higher than that of spontaneous species. Human maintenance of landscapes acted as an environmental filter for spontaneous species, but also promoted the number of cultivated plants. We conclude that appropriate investment in urban green areas may improve both plant species richness and phylogenetic diversity in urban environments.     

Spatial patterns and drivers of plant diversity in the tropical city of Sanya,China

Drivers of patterns in plant diversity remain poorly understood in tropical cities. Therefore, we investigated diversity within the tropical city of Sanya in Hainan Province of southern China by sampling one to three plots within 154 urban functional units (UFUs) based on six primary and 18 secondary UFUs. To measure diversity, we determined the number of vascular plants (species richness; SR) within each functional unit based on vegetation plots. We computed Faith's phylogenetic diversity (PD_Faith) using a large megatree of plant life. To assess the potential drivers of SR and PD_Faith, we performed multiple regressions using socioeconomic, biophysical, and vegetation management variables. The results showed significant differences in SR and PD_Faith among the six primary UFUs. PD_Faith of cultivated species was significantly higher than PD_Faith of spontaneous species in all UFUs except in the wasteland area. Management measures were better predictors of SR and PD_Faith than socioeconomic variables. The best predictor of SR and PD_Faith of spontaneous species was the management of the urban green space. Our results provide clear guidelines for improved management strategies in Sanya, especially by showing how spontaneous and/or cultivated plant diversity can be encouraged depending on environmental, ecological, and cultural needs. Our work also adds to the presently scarce literature on drivers of urban plant diversity in tropical cities worldwide.     

Landscape perception by forest understory birds in the Atlantic Rainforest: black-and-white versus shades of grey

Even among forest specialists, species-specific responses to anthropogenic forest fragmentation may vary considerably. Some appear to be confined to forest interiors, and perceive a fragmented landscape as a mosaic of suitable fragments and hostile matrix. Others, however, are able to make use of matrix habitats and perceive the landscape in shades of grey rather than black-and-white. We analysed data of 42 Chiroxiphia caudata (Blue Manakin), 10 Pyriglena leucoptera (White-shouldered Fire-eye) and 19 Sclerurus scansor (Rufous-breasted Leaftosser) radio-tracked in the Atlantic Rainforest of Brazil between 2003 and 2005. We illustrate how habitat preferences may determine how species respond to or perceive the landscape structure. We compared available with used habitat to develop a species-specific preference index for each of six habitat classes. All three species preferred old forest, but relative use of other classes differed significantly. S. scansor perceived great contrast between old forest and matrix, whereas the other two species perceived greater habitat continuity. For conservation planning, our study offers three important messages: (1) some forest specialist species are able to persist in highly fragmented landscapes; (2) some forest species may be able to make use of different anthropogenic habitat types to various degrees; whereas (3) others are restricted to the remaining forest fragments. Our study suggests species most confined to forest interiors to be considered as potential umbrella species for landscape-scale conservation planning.     

How far do birds disperse seeds in the degraded tropical landscape of Hong Kong,China?

Information on seed dispersal distances is critical for understanding plant species persistence in habitat fragments and vegetation recovery when disturbance is reduced. In the degraded upland landscape of Hong Kong (22°N), the bulbuls Pycnonotus sinensis and P. jocosus are responsible for a large proportion of seed movements. Dispersal distances were estimated from gut passage times (GPTs) and movement patterns determined by radio-telemetry. Estimates were also made for the hwamei, Garrulax canorus. Seven adult P. sinensis and four adult G. canorus were tracked in winter, and six juvenile P. sinensis, three juvenile P. jocosus and two juvenile G. canorus in summer. GPTs were 5–122 min in the bulbuls and 18–61 min in the hwamei. Most 10-min movements were <100 m for the bulbuls and <50 m for the hwamei, but the largest were >1300 m for both bulbuls and 940 m for the hwamei. Displacement-time graphs generally levelled off rapidly, with median displacements <60 m after an hour, except with summer juvenile bulbuls. Median displacements during median gut passage times for seeds from single-seeded fruits were 40, 116 and 131 m, respectively, for winter adult P. sinensis and summer juvenile P. sinensis and P. jocosus. Maximum observed displacements during the maximum measured GPTs were >1 km for all bulbuls. Estimated dispersal distances were shorter for hwameis. The radio-telemetry results were supplemented by 49 h of visual observations, during which 1,510 bird movements across open areas were observed, 64% by P. sinensis, 13% by P. jocosus, and 0.5% by G. canorus. The bulbuls, therefore, connect habitat fragments in upland Hong Kong for plants with fruits within their maximum gape width.     

Effects of spatial scale and taxonomic group on partitioning of butterfly and bird diversity in the Great Basin,USA

Different taxonomic groups perceive and respond to the environment at different scales. We examined the effects of spatial scale on diversity patterns of butterflies and birds in the central Great Basin of the western USA. We partitioned the landscape into three hierarchical spatial levels: mountain ranges, canyons, and sites within can yons. We evaluated the relative contribution of each level to species richness and quantified changes in species composition at each level. Using additive partitioning, we calculated the contribution of spatial level to overall species diversity. Both canyon and mountain range had significant effects on landscape-level species richness of butterflies and birds. Species composition of butterflies was more similar in space than species composition of birds, but assemblages of both groups that were closer together in space were less similar than assemblages that were further apart. These results likely reflect differences in resource specificity and the distribution of resources for each group. Additive partitioning showed that alpha diversity within canyon segments was the dominant component of overall species richness of butterflies but not of birds. As the size of a sampling unit increased, its contribution to overall species richness of birds increased monotonically, but the relationship between spatial scale and species richness of butterflies was not linear. Our work emphasizes that the most appropriate scales for studying and conserving different taxonomic groups are not the same. The ability of butterflies and birds to serve as surrogate measures of each others diversity appears to be scale-dependent.This revised version was published online in May 2005 with corrections to the Cover Date.     

Landscape drivers of butterfly and burnet moth diversity in lowland rural areas

Context

Butterflies have been continuously declining for several decades in Europe due to many factors, such as farming intensification. Rural landscapes have undergone dramatic changes leading to homogenized landscapes.

Objectives

In this study, we investigated how landscape composition, structure and connectivity impact butterfly communities according to their ecological and biological traits.

Methods

We made use of 5669 Lepidoptera surveys performed at 4525 distinct locations in lowland Central France. We considered 19 ecological groups based on habitat specialization, mobility, diet, voltinism or overwintering strategy. Generalized linear mixed-effect models were used to relate the species richness of these groups to landscape variables defined in circular zones with radius from 250 m to 5 km.

Results

Richness of most species groups co-varied with landscape variables, with the exception of mobile, imago-overwintering, monophagous and polyphagous species. Habitat proportion explained more variation in butterfly diversity than habitat connectivity or habitat diversity. Moreover, the best proportion models were generally found for the 250-m circular zones. Thirteen species groups were disfavored by cropland amount. Except for forest specialists and high mobility group, no other group was more diverse in landscapes dominated by a single land cover type. Rather, for total diversity and 14 groups, species richness peaked for forest proportions varying between 40 and 80%, and for total diversity and nine groups for grassland proportions ranging from 30 to 60%.

Conclusions

These results indicate that landscape homogenization is contributing to the ongoing decline in butterflies, and support preserving and (re)creating mosaics of grasslands and forests.

     

Landscape patterns and diversity of meadow plants and flower-visitors in a mountain landscape

Context

Wild flowering plants and their wild insect visitors are of great importance for pollination. Montane meadows are biodiversity hotspots for flowering plants and pollinators, but they are contracting due to tree invasion.

Objectives

This study quantified flowering plants and their flower-visitor species in montane meadows in the western Cascade Range of Oregon. Species diversity in small, isolated meadows was expected to be lower and nested relative to large meadows. Alternatively, landform features may influence richness and spatial turnover.

Methods

Flowering plants and their visitors were sampled in summers of 2011–2017 in twelve montane meadows with varying soil moisture. All flowering plants and all flower-visitors were recorded during five to seven 15 min watches in ten 3?×?3 m plots in each meadow and year.

Results

A total of 178 flowering plant species, 688 flower-visitor species and 137,916 interactions were identified. Richness of flower-visitors was related to meadow patch size, but neither plant nor flower-visitor richness was related to isolation measured as meadow area within 1000 m. Species in small meadows were not nested subsets of those in large meadows. Species replacement accounted for more than 78% of dissimilarity between meadows and was positively related to differences in soil moisture.

Conclusions

Although larger meadows contained more species, landform features have influenced meadow configuration, persistence, and soil moisture, contributing to high plant and insect species diversity. Hence, conservation and restoration of a variety of meadow types may promote landscape diversity of wild plants and pollinators.

     

Landscape variables impact the structure and composition of butterfly assemblages along an urbanization gradient

How urbanization affects the distribution patterns of butterflies is still poorly known. Here we investigated the structure and composition of butterfly assemblages along an urbanization gradient within the most urbanized and densely populated region in France (Île-de-France). Using a method issued from artificial neural networks, i.e. self-organizing maps (SOMs), we showed the existence of four typical assemblages ranging from urban-tolerant species to urban-avoider species. We identified indicator species of these assemblages: the peacock butterfly (Inachis io) in urbanized areas, the swallowtail (Papilio machaon) in sites with intermediate human pressure, or the meadow brown (Maniola jurtina), the small heath (Coenonympha pamphilus) and the gatekeeper (Pyronia tithonus) in meadows around Paris. A discriminant analysis showed that the four assemblages were mainly segregated by landscape elements, both by structural variables (habitat type, proportion of rural areas and artificial urban areas, patch surface) and functional variables (distance to the nearest wood, artificial area and park). Artificial neural networks and SOMs coupled stepwise discriminant analysis proved to be promising tools that should be added to the toolbox of community and spatial ecologists.     

Landscape context and plant community composition in grazed agricultural systems of the Northeastern United States

Temperate humid grazing lands are an important component of the landscape of the northeastern United States, as well as of the economy of this region. Unlike their European counterparts, little is known about the basic ecology of managed grasslands in this region. During an 8-year survey of 28 farms across the northeastern United States, we sampled the vegetation on 95 grazed plots, identifying 310 plant species, and collected data on topography, climate and soils. Landscape structure data were obtained from the National Land Cover Data (NLCD) 2001 for six radii (250–2,000 m) surrounding each site. The 500-m radius was most strongly related to plant community composition. Planned species composition was related only to site factors, while associated species were influenced by both site factors and landscape pattern. Species richness was unrelated to landscape structure for either group. Differing management effects on planned and associated species may explain the variation in their responses. Managed grasslands are a critical part of the interconnected landscape of the northeastern United States, and both affect and are affected by their surroundings.     

外来植物刺萼龙葵对当地植被组成及多样性的影响

为研究外来植物刺萼龙葵对入侵地植被多样性的影响,调查了河北省张家口市宣化区刺萼龙葵的3个不同生境(人工国槐林、河滩、荒坡)的植被,分析物种组成、植被多样性、植被重要值等指标。结果表明,无论哪种生境,刺萼龙葵的多度、频度、盖度与重要值均远远高于其他植物,刺萼龙葵在其入侵区内已经成为优势种;与对照样地相比,刺萼龙葵的生长引起30.00%以上的本土植物在入侵区消失,改变了植被组成和多样性;而原本优势的本土植物,相对多度与盖度也明显降低,其中狗尾草的降幅最大,相对多度和相对盖度分别降低了2.5倍和2.7倍。本研究为全面理解刺萼龙葵的入侵生态风险提供了依据。     

Landscape patterns as habitat predictors: building and testing models for cavity-nesting birds in the Uinta Mountains of Utah,USA

The ability to predict species occurrences quickly is often crucial for managers and conservation biologists with limited time and funds. We used measured associations with landscape patterns to build accurate predictive habitat models that were quickly and easily applied (i.e., required no additional data collection in the field to make predictions). We used classification trees (a nonparametric alternative to discriminant function analysis, logistic regression, and other generalized linear models) to model nesting habitat of red-naped sapsuckers (Sphyrapicus nuchalis), northern flickers (Colaptes auratus),tree swallows (Tachycineta bicolor), and mountain chickadees (Parus gambeli) in the Uinta Mountains of northeastern Utah, USA. We then tested the predictive capability of the models with independent data collected in the field the following year. The models built for the northern flicker, red-naped sapsucker, and tree swallow were relatively accurate (84%, 80%, and 75% nests correctly classified,respectively)compared to the models for the mountain chickadee (50% nests correctly classified). All four models were more selective than a null model that predicted habitat based solely on a gross association with aspen forests. We conclude that associations with landscape patterns can be used to build relatively accurate, easy to use, predictive models for some species. Our results stress, however, that both selecting the proper scale at which to assess landscape associations and empirically testing the models derived from those associations are crucial for building useful predictive models. This revised version was published online in July 2006 with corrections to the Cover Date.     

Effects of structural and functional habitat gaps on breeding woodland birds: working harder for less

The effects of habitat gaps on breeding success and parental daily energy expenditure (DEE) were investigated in great tits (Parus major) and blue tits (Cyanistes caeruleus) in urban parkland (Cardiff, UK) compared with birds in deciduous woodland (eastern England, UK). Tree canopy height, the percentage of gap in the canopy and the percentage of oak (in the wood only) within a 30 m radius of nest boxes were obtained from airborne remote-sensed data. Breeding success was monitored and parental DEE (great tits: both habitats; blue tits: park only) was measured using doubly labelled water in birds feeding young. In the park, mean (±SD) tree height (7.5 ± 4.7 m) was less than in the wood (10.6 ± 4.5 m), but the incidence of gaps (32.7 ± 22.6%) was greater (9.2 ± 14.7%). Great tits and blue tits both reared fewer young in the park and chick body mass was also reduced in park-reared great tits. Park great tits had a higher DEE (86.3 ± 12.3 kJ day⁻¹) than those in the wood (78.0 ± 11.7 kJ day⁻¹) and, because of smaller brood sizes, worked about 64% harder for each chick reared. Tits in the park with more than about 35% gap around their boxes had higher DEEs than the average for the habitat. In the wood, great tits with less oak around their boxes worked harder than average. Thus structural gaps, and functional gaps generated by variation in the quality of foraging habitat, increased the costs of rearing young. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.