Mineralisation of the herbicide linuron by Variovorax sp. strain RA8 isolated from Japanese river sediment using an ecosystem model (microcosm)

BACKGROUND: Linuron is a globally used phenylurea herbicide, and a large number of studies have been made on the microbial degradation of the herbicide. However, to date, the few bacteria able individually to mineralise linuron have been isolated only from European agricultural soils. An attempt was made to isolate linuron‐mineralising bacteria from Japanese river sediment using a uniquely designed river ecosystem model (microcosm) treated with ¹⁴C‐ring‐labelled linuron (approximately 1 mg L^?1). RESULTS: A linuron‐mineralising bacterium that inhabits river sediment was successfully isolated. The isolate belongs to the genera Variovorax and was designated as strain RA8. Strain RA8 gradually used linuron in basal salt medium (5.2 mg L^?1) with slight growth. In 15 days, approximately 25% of ¹⁴C‐linuron was mineralised to ¹⁴CO₂, with 3,4‐dichloroaniline as an intermediate. Conversely, in 100‐fold diluted R2A broth, strain RA8 rapidly mineralised ¹⁴C‐linuron (5.5 mg L^?1) and more than 70% of the applied radioactivity was released as ¹⁴CO₂ within 3 days, and a trace amount of 3,4‐dichloroaniline was detected. Additionally, the isolate also degraded monolinuron, metobromuron and chlorobromuron, but not diuron, monuron or isoproturon. CONCLUSION: Although strain RA8 can grow on linuron, some elements in the R2A broth seemed significantly to stimulate its growth and ability to degrade. The isolate strictly recognised the structural difference between N‐methoxy‐N‐methyl and N,N‐dimethyl substitution of various phenylurea herbicides. Copyright © 2010 Society of Chemical Industry     

Spatial variability in the mineralisation of the phenylurea herbicide linuron within a Danish agricultural field: multivariate correlation to simple soil parameters

The spatial variability in the mineralisation rate of linuron [N-(3,4-dichlorophenyl)-N'-methoxy-N'-methylurea] was studied within a previously treated Danish agricultural field by sampling soils from eleven different plots randomly distributed across an area of 20 x 20 m. The soils were characterised with respect to different abiotic and biotic properties including moisture content, organic matter content, pH, nutrient content, bacterial biomass, potential for mineralisation of MCPA [(4-chloro-2-methylphenoxy)acetic acid] and linuron. Five soils had a potential for mineralisation of linuron, with 5-15% of the added [ring-U-14C]linuron metabolised to 14CO2 within 60 days at 10 degrees C, while no extensive mineralisation of linuron was observed in the six remaining soils within this period. A TLC analysis of the methanol-extractable residues showed no development of 14C-labelled metabolites from linuron in any of the samples. Multivariate analysis was conducted to elucidate relationships between the intrinsic properties of single soil samples and initial rate of linuron mineralisation. The analysis indicated that important soil parameters in determining the spatial heterogeneity included the C(total)/N(total) ratio, pH and the water-extractable potassium contents, with the first of these highly negatively correlated and the last two highly positively correlated to the initial linuron mineralisation rate. This study shows that enhanced biodegradation of linuron may develop with successive field treatments, but that considerable in-field spatial heterogeneity in the degradation rate still exists. Combined with a parallel enrichment study focused on the underlying microbial processes, the present results suggest that intrinsic soil properties affect the linuron-metabolising bacterial population and thereby determine the spatial variability in the linuron mineralisation activity.     

Isolation and characterisation of a bacterial strain degrading the herbicide sulcotrione from an agricultural soil

BACKGROUND: The dissipation kinetics of the herbicide sulcotrione sprayed 4 times on a French soil was studied using a laboratory microcosm approach. An advanced cultivation‐based method was then used to isolate the bacteria responsible for biotransformation of sulcotrione. Chromatographic methods were employed as complementary tools to define its metabolic pathway. RESULTS: Soil microflora was able quickly to biotransform the herbicide (DT₅₀ ≈ 8 days). 2‐Chloro‐4‐mesylbenzoic acid, one of its main metabolites, was clearly detected. However, no accelerated biodegradation process was observed. Eight pure sulcotrione‐resistant strains were isolated, but only one (1OP) was capable of degrading this herbicide with a relatively high efficiency and to use it as a sole source of carbon and energy. In parallel, another sulcotrione‐resistant strain (1TRANS) was shown to be incapable of degrading the herbicide. Amplified ribosomal restriction analysis (ARDRA) and repetitive extragenic palendromic PCR genomic (REP‐PCR) fingerprinting of strains 1OP and 1TRANS gave indistinguishable profiles. CONCLUSION: Sequencing and aligning analysis of 16S rDNA genes of each pure strain revealed identical sequences and a close phylogenetic relationship (99% sequence identity) to Pseudomonas putida. Such physiological and genetic properties of 1OP to metabolise sulcotrione were probably governed by mobile genetic elements in the genome of the bacteria. Copyright © 2011 Society of Chemical Industry     

The cyclization transformation of the sulfonylurea herbicide flupyrsulfuron in the soil of winter wheat crops

The synthesis of 1-(4,6-dimethoxypyrimidine-2-yl)-7-trifluoromethyl-1,2,3,4-tetrahydropyrido [2,3-d]pyrimidin-2,4-dione has been carried out in such a way that the dimethoxypyrimidine substituent was unambiguously in position 1 of the pyrido[2,3-d]pyrimidine ring. This regioisomer was obtained by cyclization with phosgene of 2-(4,6-dimethoxypyrimidin-2-ylamino)-6-trifluoromethylnicotinamide which had previously been ionized with sodium hydride. It was shown to be identical to the metabolite generated in the soil of winter wheat crops treated previously with the sulfonylurea herbicide flupyrsulfuronmethyl [(methyl 2-(4,6-dimethoxypyrimidin-2-ylcarbamoylsulfamoyl)-6-trifluoromethylnicotinate]. The position of the dimethoxypyrimidine substituent had not previously been assigned unambiguously to positions 1 or 3 of the pyrido[2,3-d]pyrimidine ring. The regioisomer was also identical to the cyclization compound generated chemically from flupyrsulfuron in a sterile water buffer at pH 9. The metabolism pathways of flupyrsulfuron in soil are discussed in the light these structure determinations and compared with the soil metabolism pathways frequently observed with other sulfonylurea herbicides.     

Mineralization of 2,4‐D,mecoprop, isoproturon and terbuthylazine in a chalk aquifer

The potential to mineralize 2,4‐dichlorophenoxyacetic acid (2,4‐D), mecoprop, isoproturon and terbuthylazine was studied in soil and aquifer chalk sampled at an agricultural field near Aalborg, Denmark. Laboratory microcosms were incubated for 258 days under aerobic conditions at 10 °C with soil and chalk from 0.15–4.45 m below the surface. The [ring‐U‐¹⁴C]‐labeled herbicides were added to obtain a concentration of 6 µg kg^?1 and mineralization was measured as evolved [¹⁴C]carbon dioxide. The herbicides were readily mineralized in soil from the plough layer, except for terbuthylazine, which was mineralized only to a limited extent. In the chalk, lag periods of at least 40 days were observed, and a maximum of 51%, 33% and 6% of the added 2,4‐D, mecoprop and isoproturon, respectively, were recovered as [¹⁴C]carbon dioxide. Large variations in both rate and extent of mineralization were observed within replicates in chalk. No mineralization of terbuthylazine in chalk was observed. As a measure of the general metabolic activity towards aromatic compounds, [ring‐U‐¹⁴C]‐benzoic acid was included. It was readily mineralized at all depths. © 2000 Society of Chemical Industry     

Potential for microbial diuron mineralisation in a small wine‐growing watershed: from treated plots to lotic receiver hydrosystem

BACKGROUND: Since biological degradation processes are known to be a major driver of the natural attenuation of pesticide residues in the environment, microbial communities adapted to pesticide biodegradation are likely to play a key environmental role in reducing pesticide exposure in contaminated ecosystems. The aim of this study was to assess the diuron‐mineralising potential of microbial communities at a small‐scale watershed level, including a diuron‐treated vineyard (pollution source), its associated grass buffer strip (as a river protection area against pesticide runoff) and the lotic receiver hydrosystem (sediments and epilithon), by using radiorespirometry. RESULTS: Comparison of results obtained at different sampling sites (in both soil and aquatic systems) revealed the importance of diuron exposure in the adaptation of microbial communities to rapid diuron mineralisation in the vineyard but also in the contaminated grass strip and in downstream epilithic biofilms and sediments. CONCLUSION: This study provides strong suggestive evidence for high diuron biodegradation potential throughout its course, from the pollution source to the final receiving hydrosystem, and suggests that, after microbial adaptation, grass strips may represent an effective environmental tool for mineralisation and attenuation of intercepted pesticides. Copyright © 2009 Society of Chemical Industry     

Desorption of diuron and isoproturon from undispersed clay loam soil

Studies were conducted to investigate the desorption of diuron and isoproturon adsorbed on undispersed clay loam soil, and the influence of residence time in soil on desorption. The soil was treated at 0·6 or 3 mg kg^-1, at 70% moisture content and in the presence of sodium azide to prevent degradation. Measurement of herbicide concentrations in soil solution sampled by means of glass microfibre filters showed that adsorption mainly occurred for one day but long-term sorption proceeded for >two weeks. After a one-day or three-week residence time, soil solution was partly replaced (28%). Measurement of concentrations in solution showed rapid desorption, with equilibria being achieved within 1 h (diuron) or a few hours (isoproturon). After 16 successive desorptions done at 30-min or 12-h intervals, equilibration times tended to be longer. For the short residence time, desorption and long-term sorption could occur simultaneously and equilibration might be faster. Residence time had no significant effect on desorption kinetics nor on the small hysteresis observed for diuron. The aging effect, involving long-term sorption only, decreased the proportion of diuron removed from the soil by successive desorptions but, for isoproturon, desorption frequency and desorption kinetics were more important. © 1997 SCI     

设施农业土壤磷素富集的动态变化

为了找出设施农业土壤磷素富集的动态变化规律,对陕北地区不同种植年限的设施农业土壤0~40cm土层及剖面磷素含量的动态变化进行了研究。结果表明:土壤全磷、有效磷、无机磷、有机磷含量在不同的种植年限及土层上形成了显著差异,在设施农业环境条件下,长期大量施用磷肥不仅使0~20 cm耕层土壤磷素大量富集,20~40 cm土层磷素也均有不同幅度增加;随着设施农业种植年限的延长,全磷、有效磷和有机磷都以不同的增加幅度和增加量逐年增加,随土层的加深逐渐递减;在各形态无机磷中,Ca2-P、Ca8-P、AL-P、Fe-P、O-P、Ca10-P分别占无机磷总量9.74%、22.18%、6.54%、5.86%、18.02%、37.66%;随着种植年限的延长,Ca2-P、Ca8-P、AL-P、Fe-P、O-P、Ca10-P含量都有不同程度的富集,主要以磷酸钙盐(包括Ca8-P、Ca10-P、Ca2-P型)的形态积累在不同土层中。     

The microbial biodegradation of paraquat in soil

The microbial degradation of [¹⁴C]paraquat using cultures from two agricultural soils was investigated. The experiments were carried out in the absence of light, under aerobic conditions. Degradation was rapid, with 50% mineralisation to [¹⁴C]carbon dioxide occurring within three weeks. HPLC, capillary electrophoresis and mass spectroscopy confirmed that the majority (>85%) of the remaining radiochemical in solution was [¹⁴C]oxalic acid, and that no paraquat remained.     

Spatial variability in the degradation rates of isoproturon and chlorotoluron in a clay soil

Thirty separate soil samples were taken from different locations at the Brimstone farm experimental site, Oxfordshire, UK. Incubations of isoproturon under standard conditions (15 °C; ?33 kPa soil water potential) indicated considerable variation in degradation rate in the soil, with the time to 50% loss (DT₅₀) varying from 6 to 30 days. These differences were confirmed in a second comparative experiment in which degradation rates were assessed in 11 samples of the same soil in two separate laboratories using an identical protocol. There was a significant negative linear relationship (r²= 0.746) between the DT₅₀ values and soil pH in this group of soils. In a third experiment, degradation rates of the related compound chlorotoluron were compared with those of isoproturon in 12 separate soil samples, six of which had been stored for several months, and six of which were freshly collected from the field. Degradation of both herbicides occurred more slowly in the stored samples than in the fresh samples but, in all of them, chlorotoluron degraded more slowly than isoproturon, and there was a highly significant linear relationship (r²=0.916) between the respective DT₅₀ values.     

Effect of recent cropping history and herbicide use on the degradation rates of isoproturon in soils

Five soil samples were taken from each of five fields with different crop management histories. Three of the fields were in an arable rotation, the fourth field was temporary grassland, and the final field was under permanent grass. Of the three arable fields, two had been cropped with winter wheat in three of the preceding 6 years, and the third had last been cropped with winter wheat once only, 6 years previously. With one exception, the winter wheat had been sprayed with the herbicide isoproturon. The rate of isoproturon degradation in laboratory incubations was strongly related to the previous management practices. In the five soils from the field that had been treated most regularly with isoproturon in recent years, <2.5% of the initial dose remained after 14 days, indicating considerable enhancement of degradation. In the soils from the field with two applications of the herbicide in the past 6 years, residues after 27 days varied from 5% to 37% of the amount applied. In soils from the other three sites, residue levels were less variable, and were inversely related to microbial biomass. In studies with selected soils from the field that had received three applications of isoproturon in the previous 6 years, kinetics of degradation were not first‐order but were indicative of microbial adaptation, and the average time to 50% loss of the herbicide (DT₅₀) was 7.5 days. In selected soils from the field that had received just one application of isoproturon, degradation followed first‐order kinetics, indicative of cometabolism. Pre‐incubation of isoproturon in soil from the five fields led to significant enhancement of degradation only in the samples from the two fields that had a recent history of isoproturon application.     

麦田新型除草剂砜吡草唑的除草活性

杂草严重影响小麦的丰产丰收,而使用除草剂是麦田杂草防除中最经济有效的手段。砜吡草唑是新型广谱、高活性的苗前土壤处理除草剂。明确砜吡草唑对麦田杂草的除草活性是该药剂在麦田应用的重要内容。本文采用温室盆栽法研究了其对麦田常见杂草的杀草谱及除草活性。研究结果表明:砜吡草唑土壤处理对麦田禾本科杂草鹅观草Roegneria kamoji、多花黑麦草Lolium multiflorum、雀麦Bromus japonicus、棒头草Polypogon fugax、蜡烛草Phleum paniculatum,阔叶杂草大巢菜Vicia sativa、播娘蒿Descurainia sophia、麦家公Lithospermum arvense、泽漆Euphorbia helioscopia具有良好的防除效果,但对节节麦Aegilops tauschii和野燕麦Avena fatua的防除效果略差。在推荐剂量180 g/hm^2下,对鹅观草、多花黑麦草、雀麦、棒头草、蜡烛草、大巢菜、播娘蒿、麦家公、泽漆的株抑制率和鲜重抑制率均可达到90%以上。而对节节麦和野燕麦的ED 90分别为209.54和886.43 g/hm^2,高于砜吡草唑的田间推荐剂量。砜吡草唑具有广泛的杀草谱及较高的除草活性,可作为小麦田杂草化学防除的重要候选药剂。     

Degradation of mecoprop at different concentrations in surface and sub-surface soil

Biodegradation of [ring-¹⁴C] mecoprop (2-(4-chloro-2-methylphenoxy)propionic acid) was determined in surface and sub-surface soil at concentrations of 0·0005, 0·05, 0·5, 5, 50, 500, 5000 and 25000 mg kg^-1. The kinetics of mineralisation were evaluated from the mineralisation rates as a function of time and by non-linear regression analysis. In the sub-surface soil, degradation was 6–8 times slower than in surface soil, but the shape of the curves was the same in both layers. At concentrations between 0·0005 and 0·5 mg kg^-1, in both surface and sub-surface soil, degradation was initially zero-order followed by first-order kinetics. At 5 to 500 mg kg^-1 in surface soil and 5 to 50 mg kg^-1 in sub-surface soil the degradation rate was initially either constant or decreasing followed by exponential degradation indicating increasing populations of mecoprop decomposers in the soil. At 5000 and 25000 mg kg^-1 in the surface soil and at 500, 5000 and 25000 mg kg^-1 in the sub-surface soil, the degradation was negligible, as determined by the percentage [¹⁴C] carbon dioxide evolved. By non-linear regression, the three-half order model was found to describe the mineralisation. © 1998 SCI     

Effects of removing Cynodon dactylon from a recently abandoned agricultural field

An understanding of ecosystem response to the removal of a dominant non‐native species is critical for planning control or eradication efforts. The objective of this study was to evaluate the response of recently abandoned agricultural fields in south‐eastern Arizona, USA to the removal of Cynodon dactylon, a dominant perennial rhizomatous grass. C. dactylon was removed from treatment plots using glyphosate herbicide. Repeated application of glyphosate to C. dactylon did have a significant impact on the cover of C. dactylon and in the community composition of the treated plots. However, patterns observed in this study were similar in both control and treated plots, suggesting that the response of the system to the removal of C. dactylon was nested within larger changes the entire system was experiencing during the time of the study. The short‐term, dynamic response to herbicide treatment seemed to be mediated by the amount and timing of precipitation. Additionally, though C. dactylon removal via herbicide treatment was effective, undesired effects including increases in other non‐native, noxious species were observed. The results demonstrate that control of C. dactylon would likely be possible and cost‐effective for this site. However, removing C. dactylon apparently created conditions conducive for other opportunistic species to increase. The decision to undertake a large‐scale eradication effort should weigh the benefits of C. dactylon removal against the potential increase in other undesirable species.     

Diuron mineralisation in a Mediterranean vineyard soil: impact of moisture content and temperature

BACKGROUND: The diuron‐mineralising ability of the microbiota of a Mediterranean vineyard soil exposed each year to this herbicide was measured. The impact of soil moisture and temperature on this microbial activity was assessed. RESULTS: The soil microbiota was shown to mineralise diuron. This mineralising activity was positively correlated with soil moisture content, being negligible at 5% and more than 30% at 20% soil moisture content. According to a double Gaussian model applied to fit the dataset, the optimum temperature/soil moisture conditions were 27.9 °C/19.3% for maximum mineralisation rate and 21.9 °C/18.3% for maximum percentage mineralisation. The impact of temperature and soil moisture content variations on diuron mineralisation was estimated. A simulated drought period had a suppressive effect on subsequent diuron mineralisation. This drought effect was more marked when higher temperatures were used to dry (40 °C versus 28 °C) or incubate (28 °C versus 20 °C) the soil. The diuron kinetic parameters measured after drought conditions were no longer in accordance with those estimated by the Gaussian model. CONCLUSION: Although soil microbiota can adapt to diuron mineralisation, its activity is strongly dependent on climatic conditions. It suggests that diuron is not rapidly degraded under Mediterranean climate, and that arable Mediterranean soils are likely to accumulate diuron residues. Copyright © 2010 Society of Chemical Industry     

The soil degradation of the herbicide florasulam

The route and rate of degradation of florasulam, a low‐rate triazolopyrimidine sulfonanilide herbicide, was investigated in six soil types under aerobic conditions at 20 or 25 °C. Degradation products were isolated and identified by mass spectroscopy. Florasulam was rapidly degraded by microbial action with an average half‐life of 2.4 days (range 0.7 to 4.5 days). The first step in the degradation pathway involved conversion of the methoxy group on the triazolopyrimidine ring to a hydroxy group to form N‐(2,6‐difluorophenyl)‐8‐fluoro‐5‐hydroxy[1,2,4]triazolo[1,5‐c]pyrimidine‐2‐sulfonamide. This metabolite degraded, with a half‐life of 10 to 61 days, via partial breakdown of the triazolopyrimidine ring to form N‐(2,6‐difluorophenyl)‐5‐aminosulfonyl‐1H‐1,2,4‐triazole‐3‐carboxylic acid. This was followed by cleavage of the sulfonamide bridge to form 5‐(aminosulfonyl)‐1H‐1,2,4‐triazole‐3‐carboxylic acid. Other degradation processes involved decarboxylation of the carboxylic acid metabolites and mineralisation to form carbon dioxide and non‐extractable residues. © 2000 Society of Chemical Industry     

Degradation of the sulfonylurea herbicide LGC-42153 in flooded soil

LGC-42153, 2-fluoro-1-[3-(4,6-dimethoxypyrimidin-2-ylcarbamoylsulfamoyl)pyridin-2-yl] propyl methoxyacetate, is a new sulfonylurea herbicide for use in rice. Its breakdown and metabolism was studied in soil under flooded conditions using two radioactive tracer compounds labelled at either the propyl group or the pyrimidine ring. The half-life of LGC-42153 was approximately 3.0 days. The mass balance over 120 days ranged from 94.0 to 104.2% of applied radiocarbon, and no significant amount of volatiles or [14C]carbon dioxide were observed. Solvent non-extractable radiocarbon reached about 11-14% of applied radiocarbon at 120 days after treatment. The major metabolic reaction was the cleavage of the carboxyl ester bond to give 1-(4,6-dimethoxypyrimidin-2-yl)-3-[2-(1-hydroxy-2-fluoropropyl)pyridine-3-sulfonyl]urea, which underwent hydrolysis of the sulfonylurea bridge giving 2-(1-hydroxy-2-fluoro)propyl-3-pyridinesulfonamide and 4,6-dimethoxy-2-aminopyrimidine.     

Degradation of the sulfonylurea herbicide LGC-42153 in flooded soil

LGC-42153, 2-fluoro-1-[3-(4,6-dimethoxypyrimidin-2-ylcarbamoylsulfamoyl)pyridin-2-yl]propyl methoxyacetate, is a new sulfonylurea herbicide for use in rice. Its breakdown and metabolism were studied in soil under flooded condition using radioactive tracers labelled at either the propyl group or the pyrimidine ring. The half-life of LGC-42153 was approximately 3.0 days. The mass balance over 120 days ranged from 94.0 to 104.2% of applied radiocarbon, and no significant amount of volatiles or [14C]carbon dioxide were observed. Solvent non-extractable radiocarbon reached 11 approximately 14% of applied radiocarbon at 120 days after treatment. The major metabolic reaction was the cleavage of the carboxyl ester bond to give 1-(4,6-dimethoxypyrimidin-2-yl)-3-[2-(1-hydroxy-2-fluoropropyl)pyridine-3-sulfonyl]urea, which underwent hydrolysis of the sulfonylurea bridge giving 2-(1-hydroxy-2-fluoro)propyl-3-pyridinesulfonamide and 4,6-dimethoxy-2-aminopyrimidine.     

Photolytic versus microbial degradation of clomazone in a flooded California rice field soil

BACKGROUND: Clomazone is a popular herbicide used on California rice fields and exhibits rapid anaerobic microbial degradation (t_1/2 = 7.9 days). To test the potential of direct and indirect photolytic degradation as a cofactor in the overall degradation rate, sacrificial time‐series microcosms were amended with water, non‐sterilized soil + water and sterilized soil + water. Clomazone was added to each microcosm, which was then exposed to natural and artificial sunlight over 35 days. Water and acetonitrile extracts were analyzed for clomazone and metabolites via LC/MS/MS. RESULTS: The calculated pseudo‐first‐order degradation rate constants (k) were k_water = 0–0.005 ± 0.003 day^?1, k_sterile = 0–0.005 ± 0.003 day^?1 and k_non?sterile = 0.010 ± 0.002–0.044 ± 0.007 day^?1, depending on light type. The formation of ring‐open clomazone, a microbial metabolite, correlated with clomazone degradation. Trace amounts of 5‐hydroxyclomazone (m/z = 256 → 125), aromatic hydroxyclomazone (m/z = 256 → 141) and an unknown product (m/z = 268 → 125) were observed. CONCLUSIONS: The photolytic degradation rate depends on both light type and the quality of the chromophores that induce indirect photolysis. Microbial degradation was found to be sensitive to temperature fluctuations. Overall, microbes are shown to be more detrimental to the environmental fate of clomazone than photolysis. Copyright © 2012 Society of Chemical Industry     

西北旱区农业水土资源空间变异特征研究

农业水土资源是人类赖以生存的物质基础。为合理利用和开发西北旱区农业水土资源,利用经典统计学和地统计学方法研究了其水资源指数和耕地资源指数的空间变异特征。结果表明:西北旱区水资源指数和耕地资源指数均具有中等变异性特征,其半方差最优拟合模型分别是高斯模型和指数模型,且均呈现空间不均衡分布,分别具有较强和中等空间相关性,其空间变异主要受结构性因子的影响。研究结果不仅可为西北旱区农业水土资源的配置、高效利用和优化提供依据,也为在较大研究范围内开展空间因子变异特征研究提供了方法参考。