Molecular characterization of the incitant of cowpea bacterial blight and pustule, Xanthomonas campestris pv. vignicola

Strains of Xanthomonas campestris pv. vignicola (Xcv), isolated from cowpea leaves with blight or minute pustules and collected from various geographic areas, were selected on the basis of pathological and physiological features. All strains were analyzed for genotypic markers by two methods: ribotyping with EcoRI endonuclease, and RFLP analysis with a plasmid probe (pthB) containing a gene required for pathogenicity from Xanthomonas campestris pv. manihotis. Ribotyping revealed a unique pattern for all the strains that corresponded to the previously described ribotype rRNA7. Based on polymorphism detected by pthB among Xcv strains, nine haplotypes were defined. The observed genetic variation was independent of the geographic origin of the strains and of pathogenic variation. Some haplotypes were widely distributed, whereas others were localized. In some cases, we could differentiate strains isolated from blight symptoms and pustules according to haplotypic composition. However, in most cases, no significant differences were observed. Our results and the previous pathogenic and biochemical characterizations suggest that the strains isolated from leaves with blight symptoms or minute pustules belong to the same pathovar. We provide information on pathogen diversity that can be used to identify and characterize resistant germplasm.     

Regulation of defense-related enzymes associated with bacterial spot resistance in Tomato

Twenty tomato (Solanum lycopersicon) cultivars were screened for resistance against bacterial spot disease incited byXanthomonas axonopodis pv.vesicatoria under field conditions with and without pathogen infection. Screening was done by artificially inoculating aX. axonopodis pv.vesicatoria suspension to 4-week-old tomato seedlings and observing them for typical symptoms of the disease. Seedlings were categorized into highly resistant, resistant, susceptible and highly susceptible cultivars on the basis of disease incidence. Tomato cultivars were screened for defense-related enzymes, total phenols and lignin contents. The temporal patterns of all these enzymes were estimated with a moderately susceptible tomato cultivar. Native PAGE analysis of both peroxidase (POX) and polyphenol oxidase (PPO) was carried out for the time course of enzyme activities and also by selecting three different tomato cultivars, following infection with the pathogen. Based on the inducible amounts of these enzymes upon pathogen infection, the tomato cultivars were correlated with the disease incidence under field conditions. A significant (P≤0.05) correlation was observed between the degree of host resistance and the enzyme levels. In highly resistant tomato cultivars the enzyme levels, total phenols and lignin contents were increased in comparison with highly susceptible tomato cultivars. Isoform analysis of POX and PPO enzymes indicated a clear difference between resistant and susceptible tomato cultivars in the number of isoforms and also in the intensity of each isoform in the presence of pathogen infection. The possible regulation of defense-related enzymes in imparting host resistance is discussed. http://www.phytoparasitica.org posting March 11, 2008.     

Susceptibility to citrus canker caused by <Emphasis Type="Italic">Xanthomonas axonopodis</Emphasis> pv. <Emphasis Type="Italic">citri</Emphasis> depends on the nuclear genome of the host plant

Susceptibility to Xanthomonas axonopodis pv. citri of a citrus cybrid, in which the nuclear and cytoplasmic genomes were derived from Citrus sinensis and C. unshiu, respectively, was evaluated. Bacterial growth in the leaves of the cybrid was similar to that in C. sinensis after pin-prick inoculation throughout the experiment, whereas growth was greater than that in C. unshiu from 8 days after inoculation. Lesion expansion and pustules that later developed from the lesions on the cybrid and on C. sinensis also appeared to be greater than those on C. unshiu. The incidence of citrus canker disease caused by the bacteria on the cybrid trees was in the field was equivalent to that on C. sinensis but was severer than on C. unshiu. These results indicate that the nuclear genome of the cybrid plays a critical role in susceptibility to citrus canker disease. However, the pathogenicity gene pthA of the bacteria is not likely to be involved in the difference in susceptibility to the bacteria between C. unshiu and C. sinensis because their susceptibility to a pthA-deficient mutant of the bacteria also differs.     

水稻品种对水稻细菌性条斑病抗性研究进展

水稻细菌性条斑病是水稻的重要病害。该病主要经带菌种子传播，对水稻的生产可造成严重危害。选育抗病品种是防治该病经济、安全有效的措施。国内外学者致力于研究该病原菌与水稻的互作关系，并广泛筛选和培育优良的抗病种质，以期通过利用水稻品种对该病原菌的抗性实现对该病的有效控制。作者对水稻品种抗性鉴定技术、抗源筛选、抗性机理和抗性遗传等方面的研究进展进行了评述，并对这一研究领域存在的问题进行了讨论，为我国植保及育种工作者提供参考。     

Identification of bacterial leaf streak of cereals by their phenotypic characteristics and host range in Iran

Forty-four bacterial isolates were obtained from infected wheat, barley and various grasses from different regions of Iran. All isolates were bacteriologically similar toXanthomonas campestris and some of their physiological and biochemical features can be useful for a primary differentiation between them. Depending on their pathogenicity, the isolates were split into two groups; the wheat group isolated from wheat, barley and grasses could infect artificially wheat, barley, rye,Agropyron elongatum, Bromus inermis, andLolium multiflorum but not oat, whereas the barley group obtained from cultivated or wild barley was pathogenic to barley only. From their bacteriological characteristics and host range, the barley and the wheat group isolated were identified asX. campestris pvs.hordei andcerealis, respectively.Aegilops sp.,Sclerochloa dura, andHeteranthelium sp. were, for the first time, shown to be hosts ofX. c. pv.cerealis.     

Genotype × environment interactions in symptom development and yield of cassava genotypes with artificial and natural cassava bacterial blight infections

Thirty-seven cassava genotypes from Benin, including advanced breeding lines, were tested for their reaction to bacterial blight in the forest–savanna transition, wet savanna and dry savanna zones of Benin. Sixteen genotypes were repeated in 12 environments. In year 1998, genotypes RB92164, RB92022, TMS30572, BEN86004, RB92033 and Dangbo2, and in year 2000, genotypes RB92202, RB92151, RB92132 and TMS30572 were resistant in one ecozone. Among the more resistant genotypes, CAP94030, BEN86040, RB89509, RB92132 and TMS30572 showed low interaction across environments and were most stable in disease reaction. Ten genotypes were classified as high yielding across environments. Among the more resistant group of genotypes, only TMS30572 and RB89509 were high yielding, with RB89509 being unstable in yield across environments. Selection of genotypes proved reliable only after artificial inoculation. Comparing environments, artificially inoculated treatments in the wet savanna zone and in the forest–savanna transition zone with stable high symptom severity proved most suitable for screening of genotypes, while the wet savanna zone with low natural infection in year 1998 was suitable for production of propagation material, and the site in the dry savanna zone with natural infection in year 1998 was the best environment for cassava production. The correlation between disease severity and root yield was significant only for the non-inoculated treatment in the dry savanna zone in year 2000 (R = –0.58), but not in any other environment. Among the 37 genotypes tested, several genotypes can be recommended to farmers in specific ecozones, and genotype TMS30572 revealed as relatively stable in disease resistance and in high yield across ecozones.     

西瓜品种资源抗细菌性果斑病苗期鉴定

为筛选高抗瓜类细菌性果斑病的西瓜资源,以24份西瓜品种资源为试材,采用苗期喷雾接种法分别接种分离自甜瓜上的瓜类嗜酸菌Acidovorax citrulli菌株pslb96和ZZ-1,鉴定各品种资源对瓜类细菌性果斑病的苗期抗性。结果表明,24份西瓜品种资源中未发现有对2株菌株表现免疫的材料,有7份资源对菌株pslb96表现高抗,12份资源对菌株ZZ-1表现高抗;9份资源对菌株pslb96表现中感或感病,7份资源对菌株ZZ-1表现中感和感病;对2株菌株均表现高抗的品种资源有野生型种质资源A9及商品种华欣、申蜜968、申选958和申抗988,占总品种资源的20.83%。部分品种资源A4、A13和申蜜7号对菌株pslb96和ZZ-1的抗性表现出明显的差异,表明相同寄主来源的2株不同菌株致病力存在差异。     

上海地区种植的21个番茄品种抗细菌性溃疡病的鉴定

番茄溃疡病是由密执安棒形杆菌密执安亚种引起的番茄最具毁灭性病害之一,选育和种植抗耐病品种是防治该病最经济有效的防治手段。本研究收集上海种植的21个番茄品种进行温室育苗,在苗期和成株期分别采用打顶法接种进行抗病性测定。分级调查病情,根据病情指数划分反应型,确定供试品种的抗感类型。在供试的21个番茄品种中,只有欧宝318、粉丽、浙粉202和世纪粉冠王表现为中度感病,其余全为高感品种,没有免疫、抗病或耐病品种。     

Identification of Resistance to Common Bacterial Blight Disease on Bean Genotypes Grown in Turkey

Common bacterial blight (CBB) in edible beans (Phaseolus vulgaris), incited Xanthomonas campestris pv. phaseoli, reduces bean yields and seed quality. The main objective of this study was to determine resistance to common bacterial blight in bean genotypes. Twenty-two bean genotypes grown in Turkey including common and snap bean cultivars/lines were collected from different parts of Turkey and tested for resistance against to Xanthomonas campestris pv. phaseoli strain MFD-11. All the common and snap bean lines/cultivars tested were moderately susceptible, susceptible or highly susceptible, except AG-7117 which was found resistant to Xanthomonas campestris pv. phaseoli. This is the first report of a resistance source in a common bean line (AG-7117) against Xanthomonas campestris pv. phaseoli.     

The use of ergosterol in the pathogenic fungusBipolaris sorokiniana for resistance rating of barley cultivars

Ergosterol content in the plant pathogenic fungusBipolaris sorokiniana was determined in different matrices including mycelium, spores, culture filtrate and infected barley leaves. Ergosterol was extracted with methanol, hydrolysed with KOH and quantified by reverse phase high performance liquid chromatography (HPLC). Our procedure was used to study how the ergosterol concentration ofB. sorokiniana varied due to fungal age and nutrient availability when growing in liquid medium. It was found that the ergosterol content decreased with fungal age. The decrease was not due to leakage. It was also found that a change to a less nutrient-rich medium caused an increase in ergosterol content whereas a change to a rich medium led to a decrease. The procedure was also used for quantification of fungal infections in complex matrices (e.g. leaves). The development of fungal infection in barley leaves was followed during 10 days. Visual grading of leaf spots was also compared to ergosterol content in three varieties of barley. The ergosterol content in the leaves increased exponentially until day 7, and the grading of the leaf spots was correlated to the ergosterol content. Our results show that, despite a great variation, ergosterol may be used as a biomarker to detect and quantify fungal infections in a given matrix.     

香料烟细菌性斑点病病原鉴定

 2004~2005年在云南保山香料烟上发现一种由细菌侵染引起的新病害,称为香料烟细菌斑点病。该病主要危害叶片,初为黑褐色水浸状圆形或多角形小斑点,以后病斑扩大、连片,形成不规则的较大坏死斑。从病叶上分离到了28株细菌菌株,菌株接种于香料烟上,发病症状与田间自然症状一致,并从回接病株上重新分离得到此病病原细菌。经过革兰氏染色反应、菌体形态、培养性状、LOPAT试验、生理生化特性分析和16S-23S rDNA序列分析,以及病原菌寄主范围测定,确定该病原菌为丁香假单胞菌烟草致病变种[Pseudomonas syringae pv. tabaci(Wolfet al.)Young et al.]。     

Races of Xanthomonas campestris pv. vesicatoria overcoming the gene Bs2 for bacterial spot resistance in pepper, prevalent on Capsicum chinense in Barbados and Grenada and weakly pathogenic on bell pepper and tomato in the field

A total of 404 isolates of Xanthomonas campestris pv. vesicatoria , obtained from Capsicum chinense cv. West Indian Red grown in Barbados and Grenada, were differentiated into pathogenic races, and of these, 96 were tested also for selected taxonomic group phenotypes. The response of C. chinense to infection by several X. campestris pv. vesicatoria races and the contribution of races isolated from this cultivar to severity of bacterial spot of bell pepper and tomato were also investigated. P4T2, P5T2 and P6T2 were the predominant races of X. campestris pv. vesicatoria isolated from C. chinense grown in Grenada, whereas nine races (T1, P4, P6, P0T2, P1T2, P4T1, P4T2, P6T1 and P6T2) were isolated in Barbados. Race P4T2 comprised 46.0 and 71.4% of the isolates from Barbados and Grenada, respectively. The 96 isolates, all of which overcame resistance conferred by the gene Bs2 , shared taxonomic group B strain characteristics, including the presence of the β-protein band, positive amylolytic activity and inability to oxidize cis -aconitate. The C. chinense cv. West Indian Red was susceptible only to races of X. campestris pv. vesicatoria that can overcome Bs2 gene resistance. Of six such races identified in Barbados, only P4T1, P4T2 and P6T1 affected bacterial spot-susceptible bell pepper or tomato in the field, and they amounted to only 1.5–2.1% of each sample of isolates from these plant species. Moreover, they were confined to the smallest bacterial spot lesions. Bell pepper was most severely affected by combinations of races T1 with P3T2 and T2 with P0T1, and tomato by race T1 only and combinations of races P0T1 with P0T2 and P1T1 with P1T0, all of which prevailed in the field despite selection against them by C. chinense cv. West Indian Red.     

Note: Phenylalanine ammonia lyase activity in tomato seedlings and its relationship to bacterial canker disease resistance

Phenylalanine ammonia lyase (PAL) activity was studied in different genotypes of tomato with varying degrees of resistance and susceptibility to bacterial canker disease after inoculation withClavibacter michiganensis ssp.michiganensis. In resistant genotypes the enzyme activity increased significantly 21 h after bacterial inoculation, whereas in the susceptible genotypes the activity decreased. The increase or decrease in PAL activity correlated well with the degree of host resistance along with total phenol contents. The role of PAL in imparting resistance to tomato against bacterial canker disease is discussed. http://www.phytoparasitica.org posting Nov. 14, 2005.     

Xanthomonas campestris pv. populi,the causal agent of bark necrosis in poplar

A bacterium was isolated from superficial bark necroses on young poplars and its pathogenicity demonstrated by inoculation experiments. The organism was identified asXanthomonas campestris. Cross-inoculations showed that a previously undescribed pathovar was involved. It is suggested to designate this organismX. campestris pv.populi.Samenvatting Uit een oppervlakkige bastnecrose bij jonge populieren werd massaal een bepaalde bacterie geïsoleerd. Met deze bacterie werden gezonde populieren in het veld geïnoculeerd via verwonding van de bast. Als gevolg van de inoculaties ontwikkelden zich bij ongeveer 40% van de geïnoculeerde bomen hetzelfde type bastnecrosen, terwijl bij de controleplanten geen enkele reactie optrad. Uit de kunstmatig verkregen necrosen werd dezelfde bacterie geïsoleerd.Identificatie met biochemische en serologische methoden toonde aan dat de bacterieXanthomonas campestris was.Vervolgens werden in de kas kruisinoculaties uitgevoerd met verschillende xanthomonaden op populier, wilg, kool en geranium. DeX. campestris isolaten uit populier tastten behalve populier ook wilg aan. De andere gebruikte stammen waren waardplant-specifiek, al bleven sommigen ervan minstens acht maanden in leven in een niet-waardplant, evenwel zonder symptomen te veroorzaken. Geconcludeerd wordt, dat de bastnecrosen zijn veroorzaakt door een nog niet beschreven pathovar vanX. campestris. Voorgesteld wordt om deze bacterieXanthomonas campestris pv.populi te noemen.     

Survival of the Anthurium Blight Pathogen, Xanthomonas axonopodis pv. Dieffenbachiae, in Field Crop Residues

Bacterial blight, caused by Xanthomonas axonopodis pv. dieffenbachiae (Xad), is a major threat to the anthurium cut flower industry worldwide. Two field trials in Hawaii evaluated the long-term persistence of Xad in artificially-infested crop residues. Xad survived in leaf, petiole, and root residues for as long as 4 months when tissues were left on the surface or buried 15cm deep. Survival was considerably shorter (approximately 20 days) outside of residues. Xad that was recovered from residues over a period of 4 months retained pathogenicity. Xad was isolated from living roots of naturally-infected plants which further suggests that roots left in the field after culling may be particularly important, but overlooked, inoculum source. This information is key to determining minimum fallow periods before replanting devastated fields.     

Polyphasic phenotypic and genetic analysis reveals clonal nature of Xanthomonas axonopodis pv. punicae causing pomegranate bacterial blight

Yellow-pigmented bacteria isolated from blight-affected pomegranate leaves and fruit across seven Indian states in epidemics during the years 2008–2016 were characterized and identified using phenotypic and genotypic tools. All bacterial isolates shared phenotypic traits such as colony morphology, NaCl and pH sensitivity and fuscan production, and caused typical lesions on pomegranate plants upon artificial inoculation. Analysis of 16S ribosomal DNA and 16S–23S rDNA intergenic spacer sequences confirmed their identity as Xanthomonas axonopodis pv. punicae. The new isolates collected after 2000 were compared with an old isolate from the 1950s using polyphasic taxonomic approaches including multilocus sequence analysis (MLSA). Nucleotide polymorphism in 24 isolates for nine genomic loci (dnaK, fyuA, gyrB (Young), gyrB (Almeida), rpoD, fusA, gapA, gltA and lepA) showed minor variations in loci fyuA and gyrB. Isolates were grouped into four nearly identical sequence types, ST1, ST2, ST3 and ST4, based on their allelic profiles, ST3 being widespread in Indian states. Molecular phylogenetic analysis of concatenated 5690 bp with other Xanthomonas pathovars revealed its close genetic similarity with the X. citri group. The blight outbreak in diverse geographical locations is attributed to a re-emerged clonal population of X. axonopodis pv. punicae on a genetically homogenous pomegranate cultivar. The latently infected vegetative planting material of elite pomegranate cultivars contributed to the dissemination of the bacterial inoculum. This study highlights and forewarns of the role played by the clonally propagated elite pomegranate cultivars in disseminating and sustaining clonal populations of this bacterial plant pathogen in many Indian states.     

Functional analysis of the 3′ end of avrBs3/pthA genes from two Xanthomonas species

The phytopathogens Xanthomonas oryzae pathovar (pv.) oryzae and Xanthomonas axonopodis pv. citri each contain several avrBs3/pthA family genes. Structural features of these genes important for avirulence and/or virulence functions include a central region of multiple direct repeats and three nuclear localization signals (NLSs) and an acidic activation domain (AAD) at the 3′ end. To identify other regions critical to function in the 3′ ends of these genes, we constructed several chimeras using apl1 and apl2 from X. axonopodis pv. citri and avrXa10 and avrXa7 from X. oryzae pv. oryzae and evaluated their functions by inoculation to citrus and rice. The apl1 and avrXa7 genes are major virulence determinants in citrus and rice, respectively, while the contributions of apl2 and avrXa10 to virulence are negligible or not measurable. Constructs that contained a 417 bp HincII-SphI fragment from the 3′ end of apl1 in combination with the repeats from avrXa7, avrXa10, and apl1 caused a canker phenotype on citrus. Interchange of the HincII-SphI fragment between avrXa7 and avrXa10 abolishes avrXa7 avirulence function and reduces its virulence but it does not affect avrXa10 avirulence function in rice. avrXa7 caused a hypersensitive response (HR) in citrus and replacement of it's 3′ end with that of apl1 resulted in loss of canker and induction of HR. Thus, the HincII-SphI fragment of the avrBs3/pthA gene family is important for avirulence and virulence functions in two different plant species, Oryza sativa and Citrus natsudaidai HAYATA.