The importance of being natural in a human‐altered riverscape: role of wetland type in supporting habitat heterogeneity and the functional diversity of vegetation

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Temperature influence on the fish assemblage structure in a large lowland river, the lower Oder River, Germany

Abstract –  Water temperatures were expected to structure river fish assemblages by promoting: (i) offspring's growth and densities in warm years, (ii) spring spawning fish when temperatures increase early and (iii) improved growth and overwintering condition from elongated vegetation periods. Favourable temperature conditions in their first year should improve growth and survival in consecutive years. In the lower Oder River, Germany, fish have been sampled annually, 0+ in July since 1997, and older fish in November since 1998. This data set was analysed to test the hypotheses mentioned above. The water temperature ranged between −0.4 and 25.1 °C during the study period, resulting in substantial variations of the 29 temperature metrics derived from daily means. Cumulative degree-days until catch, in spring and during March, as well as minimum and mean temperatures in March and spring explained 63% of the variability observed. The mean total length of the most frequent 0+ fish differed significantly between years related to temperature. Increased length growth at higher temperatures was a general tendency. Total length and density of 0+ fish were significantly inversely correlated, but the potential influence of temperature on species densities was not significant. The mean fish densities varied not significantly between years. No indication was found that higher total length in the first year of life resulted in an improved growth in subsequent years.
For future research and management it has to be expected that temperature impacts become increasingly significant in regulated river systems. With decreasing hydrodynamics the significance of temperature effects will increase.     

The presence of artificial stones predicts the occurrence of the European bullhead (Cottus gobio) in a regulated lowland river in Flanders (Belgium)

Abstract – In a regulated lowland river in Flanders (northern part of Belgium), the locally endangered bullhead was found mainly near bridges. These locations are characterised by the presence of artificial stones and a relatively high water velocity. To preserve and expand the few remaining bullhead populations, the removal of these stones should be avoided and new suitable habitats should be created.     

Environmental DNA reveals the temporal and spatial extent of spawning migrations of European shad in a highly fragmented river basin

1. Artificial barriers on lowland rivers impede the spawning migrations of anadromous fishes, preventing access to historical spawning areas. In the cryptic European shads Alosa alosa and Alosa fallax (‘shad’ hereafter), this has resulted in population declines across their range. Conservation programmes aim to facilitate the passage of migrators over these barriers and so require baseline information on the spatial and temporal extent of current migrations.
2. Here, a shad-specific environmental DNA (eDNA) assay was used to quantify the spatial extent of shad spawning migrations in the River Severn basin, western England. This basin is characterized by the presence of multiple barriers in the lower catchment. In 2017, the eDNA assay was piloted in the River Teme, an important shad spawning tributary, and then applied in 2018 and 2019 across the lower Severn basin.
3. In all years, shad DNA was detected between mid-May and mid-June, with the maximum spatial extent of shad distribution being in early June when shad eDNA was detected upstream of weirs that were generally considered as impassable. In 2018, this included the detection of shad above the most upstream weir on the main River Severn that required individual fish to have passed six weirs.
4. Although barriers inhibit the spawning migrations of shad, this eDNA assay showed that some highly vagile individuals might be able to ascend these barriers and migrate considerable distances upstream. This suggests that efforts to increase the permeability of these barriers could result in relatively high numbers of migrating shad reaching upstream spawning areas. These results demonstrate that this eDNA assay could also be used across their range, to further quantify the spatial extent of their spawning, including in highly fragmented rivers and those where shad are believed to spawn only occasionally and are rarely observed.

     

Seasonal effects of macrophyte growth on rainbow trout habitat availability and selection in a low‐gradient,groundwater‐dominated river

Rainbow trout habitat use is often described in high‐gradient, runoff‐driven, heterotrophic streams where geomorphic features and overhanging riparian vegetation provide channel complexity and cover. However, many rainbow trout populations thrive in rivers with contrasting aquatic habitat. We describe rainbow trout habitat use in a low‐gradient, groundwater‐dominated tailwater river where river flow management and macrophyte growth and senescence largely govern available trout habitat. In the summers of 2013 and 2014, available aquatic habitat (depth, velocity, macrophyte cover, substrate size) was quantified, while individual trout location was determined by radio telemetry and linked to environmental variables. Detailed habitat surveys indicate that macrophyte cover increases throughout the summer and is a strong determinant of in‐stream habitat characteristics. Paired logistic regression shows that adult rainbow trout prefer greater depths. Water depth increases with macrophyte abundance at both reach and local scales as plants restrict flow, and available trout habitat is linked to this seasonal pattern. When macrophyte abundance is high, adult trout show secondary preference for localised areas of lower macrophyte cover but otherwise show no selectivity for macrophyte cover, velocity or substrate size. Results suggest that submerged aquatic plants increased the quantity and quality of rainbow trout habitat as a source of channel complexity and cover. Macrophytes may play a similar role in other low‐gradient streams and should not be overlooked by fisheries managers considering habitat suitability.     

Shining a light on the loss of rheophilic fish habitat in lowland rivers as a forgotten consequence of barriers,and its implications for management

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Effects of antimicrobial peptides on growth,morphology of foregut villi and related genes mRNA expression in the common carp (Cyprinus carpio)

A 60‐day feeding trial was conducted to examine the effects of different levels (0, 100, 200, 400 and 600 mg/kg) of antimicrobial peptides on growth, protease activity of foregut, the morphology of foregut villi and related genes mRNA expression level in the common carp (Cyprinus carpio). The results showed that the feed of antimicrobial peptides promote common carp growth, and the optimal dosage of antimicrobial peptides is 200–333 mg/kg in the common carp feed. The protease activity of 200 and 400 mg/kg groups were significantly higher than the control and other groups (p < 0.05). The foregut villus height with 100, 200 and 400 mg/kg antimicrobial peptide groups were significantly higher than control group (p < 0.05). The crypt depth of 200 and 400 mg/kg antimicrobial peptide groups were significantly lower than control group (p < 0.05). The ratio of villus height and crypt depth of 100, 200 and 400 mg/kg antimicrobial peptide groups were significantly higher than control group (p < 0.05). The ratio with 600 mg/kg group was significantly lower than the control group (p < 0.05). The IGF‐I gene expression level of 200 mg/kg and 400 mg/kg groups were significantly higher than the control group and 600 mg/kg group (p < 0.05). The IL‐1β gene expression level of 100 mg/kg and 200 mg/kg groups were significantly higher than the control group (p < 0.05). These results indicated up‐regulation of growth and immune related genes in antimicrobial peptides fed common carp. Correlation analysis showed that IGF‐I mRNA and IL‐1β mRNA were positively correlated with SGR. IL‐1β mRNA and FCR were significantly negative correlated. It indicated that growth and immune gene common regulated the growth of the carp under antimicrobial peptides intervention. In conclusion, antimicrobial peptides can improve growth and related genes mRNA expression in the common carp. Further studies using molecular biological technique or immunologic methods are required to conclude that antimicrobial peptides are beneficial in common carp.     

The effect of docosahexaenoic and eicosapentaenoic acids in live food on the development of abnormal morphology in hatchery-reared brown sole Pseudopleuronectes herzensteini

We examined the effect of docosahexaenoic acid (DHA) and eicosapentaenoic acid (EPA) on the rates of abnormal morphology in juvenile brown sole Pseudopleuronectes herzensteini. Larvae during the D–E stages (15–24 days post hatching) were fed live food containing various amounts of DHA and/or EPA prepared using emulsified oils (DHA ethyl ester, EPA ethyl ester, and corn oil). Larvae during the F–I stages were fed Artemia enriched with a commercial diet supplement. We found that DHA and EPA promoted larval development and improved the incidence of morphological abnormalities in brown sole juveniles to a similar extent. However, DHA was more effective than EPA in preventing the appearance of morphological abnormalities in brown sole. The incidence of normal morphology was clearly improved by an increase of the DHA content in brown sole larvae at 25 days post-hatching. These results suggest that it is important to promote larval development and feed larvae with live food containing high levels of DHA during the D–E stages to prevent morphological abnormalities in brown sole juveniles.     

Influence of environmental and biological factors on the overwinter growth rate of Atlantic salmon Salmo salar parr in a UK chalk stream

Smolt lengths are increasingly recognised as an important determinant of salmonid marine survival rates. Overwintering growth rates could thus strongly influence adult return rates. In Atlantic salmon Salmo salar, most overwintering studies focus on rivers in harsh climates with minimal growth, yet in more southerly rivers, overwintering growth rates can be relatively high. Here, the factors influencing annual overwinter growth rates were tested for juvenile S. salar in a temperate chalk stream in southern England over 13 years, where over 10,000 salmon parr were tagged annually in autumn and a proportion recaptured the following spring during smolt emigration. Winters of higher and more variable water temperatures, with longer periods of high flows, showed increased overwintering growth rates. Faster growth rates were recorded from sites further upstream and that had lower parr densities; smaller individuals also grew more than expected for their initial size. These results suggest that a range of factors influences overwintering salmonid growth rates and can be used to inform management decisions to maximise the quality of emigrating smolts.     

The effect of C/N ratio on bacterial community and water quality in a mussel‐fish integrated system

A 30‐day experiment was conducted to evaluate the effect of C/N ratio on water quality and bacterial community in an integrated system comprising one molluscan species (pearl mussel Hyriopsis cumingii) and two fish species (gibel carp Carassius gibelio and silver carp Hypophthalmichthys molitrix) at five C/N ratios (6, 8, 10, 12 and 14). The mussel and fishes were reared in the experimental tanks (400 L), but gibel carp received formulated feed. Water quality in the experimental tanks was analysed on day 0, 10, 20 and 30, and bacterial community in the water column and sediment was analysed on day 30. Total nitrogen, total phosphorus and total organic carbon accumulated in the tanks over time. Ammonia and nitrite decreased with the increase in C/N ratio. Bacterial community in the water column and sediment changed at the phylum and genus levels with the increase in C/N ratio, and the critical C/N ratio causing a functional shift of bacterial community occurred at 10 in water column and 12 in sediment. The increase in C/N ratio benefited the growth of both potential probiotics and pathogenic bacteria. The high C/N ratio enhanced the bacterial functions of chemoheterotrophy and hydrocarbon degradation, but depressed the functions of nitrification and denitrification in the water column and sediment respectively. This study reveals that the C/N ratio can be used as a tool to manipulate the bacterial community and water quality in the mussel‐fish integrated system.     

The effect of a crab predator (Cancer porteri) on secondary producers versus ecological model predictions in Tongoy Bay (south‐east Pacific coast): implications for management and fisheries

• 1. The present study compares the propagation of effects observed as a response to changes in the abundance of a top predator (top‐down cascading effect) in a benthic community within the south‐east Pacific upwelling ecosystem of northern Chile, with predictions derived from quantitative and qualitative multispecific models.
• 2. Results with Loop Analysis achieved 71.4% of predictive certainty; indicating that this technique is useful for assessment of the effects of human intervention related to the mud‐bottom ecosystem tested. On the other hand, Ecosim using bottom‐up flow control mechanism achieved only 14.3% certainty. In an intermediate range, predictions obtained using the Mixed Trophic Impacts and Ecosim models using top‐down, mixed and flow control mechanisms estimated by the program, achieved 57.1% certainty.
• 3. The results obtained have important implications for the management of communities and ecosystems since human interventions can be studied using holistic models with an end result of evaluating the eventual changes that they propagate.

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