广西宜州甘蔗白条病调查及分子检测

甘蔗白条病是一种检疫性细菌病害,具有危害性大,潜伏期长的特点,由白条黄单胞菌（Xanthomonas albilineans）引起,在种植甘蔗的主要国家或地区均有发生。2020年在广西宜州蔗区发现疑似感染甘蔗白条病蔗株,为明确病原及发生情况,为其科学防控提供科学依据。本研究对不同甘蔗品种新植和宿根蔗进行发病率调查,并采集病样进行PCR检测分析。田间调查结果显示：不同品种自然发病率不同,桂糖44新植和宿根蔗均有白条病发生,且宿根蔗发病率高于新植蔗,其中新植蔗发病率为8%～18%,平均发病率为13.83%;宿根蔗发病率为18%～34%,平均发病率为24.71%。而桂糖42、桂糖55、柳城05-136等3个品种新植和宿根蔗均未发现白条病。PCR检测结果表明：有10份样品扩增出608 bp的特异性条带,阳性检出率为90.9%,所得序列与X. albilineans序列同源性高达100%,且在构建的系统发育树处于同一分支。本研究结果表明,广西宜州蔗区发现由X. albilineans引起的甘蔗白条病。     

甘蔗赤条病菌巢式PCR检测

甘蔗赤条病是由燕麦食酸菌燕麦亚种(Acidovorax avenae subsp.avenae,Aaa)引起的一种世界性甘蔗细菌病害。为建立Aaa快速、灵敏的检测技术,根据该病菌16S~23S核糖体基因及其转录间隔区ITS分别设计2对特异性引物,建立Aaa巢式PCR检测方法。结果表明,建立的巢式PCR方法对Aaa标准菌株、水稻食酸菌A.oryzae具有特异性,可扩增出454 bp目的条带,对近缘种德氏食酸菌A.delafieldii及其它科属的红色雷夫松氏菌Leifsonia rubra和甘蔗宿根矮化病菌L.xyli subsp.xyli未扩增出任何条带。以感染Aaa的甘蔗叶片总DNA、含ITS靶标片段的质粒DNA标准品及Aaa标准菌液为模板,巢式PCR灵敏度最低检测限分别为10 fg/μL、10拷贝/μL和36 CFU/mL,是常规PCR灵敏度的1 000倍。应用巢式PCR和常规PCR对14份有赤条病症状的田间甘蔗叶片样品进行平行检测,阳性检出率分别为100.0%和28.6%,表明巢式PCR比常规PCR检测方法具有更高的灵敏度。本研究建立的巢式PCR方法适合于田间甘蔗赤条病害的分子检测与鉴定。     

广东甘蔗黄叶病田间调查及病原病毒的分子检测

 广东省粤北和粤西蔗区多个县市的田间甘蔗上观察到甘蔗黄叶病(Sugarcane yellow leaf disease,SYLD)典型症状,目前该病仅局部分布,但部分田块病株率为5%~80%,发病品种有青皮果蔗、黑皮果蔗、新台糖系列品种、粤糖79/177和粤糖93/159等。采集发病田间显症叶片、无症叶片和在病叶上取食的甘蔗绵蚜(Ceratovacuna lanigera)样品,抽提总RNA,以基于甘蔗黄叶病毒(Sugarcane yellow leaf virus,SCYLV) CP基因序列的特异引物进行一步RT-PCR和巢式PCR扩增,并对扩增产物进行核苷酸序列测定和BLAST比对。结果显示,RT-PCR及巢式PCR产物核苷酸序列与分离自巴西的SCYLV B1株系相应区段同一率为100%;一步RT-PCR可从约70%的显症叶片样品中检测到SCYLV,而病田中的无症叶片样品以及在病叶上取食的单头甘蔗绵蚜样品需经巢式PCR扩增方可检测到SCYLV,阳性率分别为1%~5%和83%。本研究表明,广东省栽培甘蔗已受到SCYLV侵染,甘蔗绵蚜携带SCYLV。     

应用PCR技术检测甘蔗各部位宿根矮化病病菌

甘蔗宿根矮化病(ratoon stunting disease,RSD)是中国甘蔗产区一种主要病害。为保证甘蔗健康种苗生产,应用实验室建立的甘蔗宿根矮化病菌PCR检测技术对甘蔗品种粤糖00-236、新台糖22宿根蔗和其健康种苗各部位进行检测。检测结果表明,两品种宿根蔗的老根、新根、老叶、新叶、叶脉、蔗汁都检测到RSD;茎尖和腋芽部位均未检测出RSD。因此,采取腋芽或茎尖部位进行甘蔗组培生产健康种苗,可有效地除去甘蔗RSD病菌。     

云南弥勒甘蔗褐条病病原菌的分离鉴定

2019年10月,在云南弥勒甘蔗示范基地(23.92°N,103.33°E)发现‘云瑞10-187’和‘福农11-2907’高感甘蔗褐条病,发病率为50%～80%。为明确其病原,本研究采集病样进行了病原菌的分离、鉴定及系统发育分析,以期为该病害有效防控提供科学依据。依据形态特征、核糖体RNA的内转录间隔区(internal transcribed spacer, ITS)和甘油醛-3-磷酸脱氢酶基因(glyceraldehyde-3-phosphate dehydrogenase, GAPDH)分子鉴定及致病性测定,将病原菌鉴定为狗尾草平脐蠕孢Bipolaris setariae,是云南省甘蔗褐条病病原菌新记录种,丰富了甘蔗褐条病病原菌信息,为后续其他蔗区褐条病的研究奠定了基础。     

果蔗脱毒种苗甘蔗花叶病、黄叶病和宿根矮化病分子检测

为监测2016-2017年种植的果蔗脱毒种苗脱毒效果,分别采集广州市南沙区和增城区、湛江市麻章区及华南农业大学甘蔗育种基地共83份果蔗脱毒种苗样本,进行甘蔗花叶病毒(SCMV)、高粱花叶病毒(SrMV)和甘蔗黄叶病毒(SCYLV)RT-PCR检测。结果表明SCMV的阳性样本数为3个,阳性检出率3.61%;SrMV的阳性样本数为0;SCYLV的阳性样本数为78个,阳性检出率93.98%。采用常规PCR和巢式PCR技术对采集于广州市增城区和华南农业大学甘蔗育种基地的30份果蔗脱毒种苗样本进行宿根矮化病菌(Lxx)检测,常规PCR检测阳性样本数为0,巢式PCR检测疑似阳性样本数为8,疑似阳性检出率26.67%。本研究采用茎尖组织培养脱毒技术培育的果蔗脱毒种苗能有效脱除果蔗种苗内的SCMV、SrMV和Lxx,但SCYLV的脱除效果有待进一步研究。     

云南甘蔗白条病的多基因联合鉴定

甘蔗白条病是由白条黄单胞菌Xanthomonas albilineans(Ashby) Dowson引起的甘蔗重要病害。2017年在云南保山、孟定和金平蔗区的甘蔗上发现疑似白条病的病害。从病株蔗茎中分离得到圆形,凸面,光滑,有光泽,黄色的细菌菌落。经柯赫氏法则验证,分离得到的细菌为该病害的病原菌。使用16S rRNA基因、gyrB基因和rpoD基因对分离得到的病原菌进行了分子鉴定,BLAST和系统发育分析表明本研究所获得的病原菌的3个基因的核苷酸序列与白条黄单胞菌GPE PC73菌株(GenBank登录号:FP565176)对应基因的核苷酸序列一致性均为100%,在系统发育树中处于同一分支。根据田间症状诊断、柯赫氏法则验证及分子鉴定结果,确认云南保山、孟定和金平发生的甘蔗病害为X.albilineans引起的甘蔗白条病。     

勐甘蔗区甘蔗褐条病重发原因分析与防治措施

甘蔗褐条病是沧源县勐甘蔗区甘蔗上近年发展起来的主要病害。5～9月是该病的流行期,发生主要受种苗带菌、品种抗病性、气候条件、栽培水平等因素影响。针对发病因素,提出和实施了有效的综合防治措施。     

甘蔗重要病害分子检测技术

快速有效地对甘蔗重要病害病原进行诊断检测,明确监测病害的病原是科学有效防控甘蔗病害的基础和关键。云南省农业科学院甘蔗研究所通过探索研究、改进创新、优化建立了甘蔗黑穗病、锈病、白条病、宿根矮化病、赤条病、花叶病、斐济病、黄叶病、杆状病毒病和白叶病等10种重要病害13种病原的分子快速检测技术,为甘蔗病害的有效诊断和防控、脱毒健康种苗检测及引种检疫提供了技术支撑。     

国外引进甘蔗材料白叶病植原体巢式PCR检测及其序列分析

为有效防止引起重要危险性检疫病害甘蔗白叶病(SCWL)的植原体病原随引进甘蔗材料侵入我国,确保我国甘蔗生产安全,本研究对从缅甸、菲律宾、法国和泰国引进的22个甘蔗材料进行了SCWL植原体巢式PCR检测,并对阳性样品的巢式PCR产物进行了测序及序列分析。结果表明,18个甘蔗材料呈SCWL植原体阳性,阳性检出率为81.8%。所有SCWL阳性样品的16S-23S基因间隔区片段长210bp,与GenBank中已有的其他SCWL植原体分离物(登录号HQ917068、AB646271)的同源性为99.8%~100%,并在系统发育树中聚为一个类群。根据SCWL的巢氏PCR检测及其序列分析结果,对呈阳性的材料及时进行了集中销毁处理。     

Molecular identification and prevalence of Acidovorax avenae subsp. avenae causing red stripe of sugarcane in China

Red stripe caused by the bacterium Acidovorax avenae subsp. avenae (Aaa) is a disease of sugarcane that is distributed worldwide. In this study, 108 sugarcane leaf samples were collected in 2013–2016 from nine sugarcane‐growing regions in China. Aaa was detected by PCR with specific and novel primers from the 16S–23S rDNA internal transcribed spacer region in 81 of 84 (96%) leaves with red stripe symptoms and in 20 of 24 (83%) leaves without symptoms. Furthermore, Aaa was detected in all nine sampling locations representing six sugarcane‐producing provinces in China. The 101 amplified fragments were cloned and sequenced. The size of the nucleotide sequences varied from 436 to 454 bp and the sequence identity ranged from 89.2% to 100%, suggesting a significant genetic variation among Aaa strains from China. Five major restriction fragment length polymorphism (RFLP) profiles were obtained by in silico and polyacrylamide gel electrophoresis analyses of the PCR products digested with HindIII and EcoRI. The causal agent of sugarcane red stripe was also successfully isolated from a diseased plant and its pathogenicity confirmed by inoculation of healthy sugarcane plantlets and reproduction of disease symptoms. The data showed that Aaa is currently widespread in China, suggesting that control methods should be implemented to limit the impact of red stripe on sugarcane production.     

Acibenzolar-S-methyl efficacy against bacterial brown stripe caused by Acidovorax avenae subsp. avenae in creeping bentgrass

Journal of General Plant Pathology - Bacterial brown stripe caused by Acidovorax avenae subsp. avenae (Aaa) causes serious damage on creeping bentgrass on golf course greens. However, there are few...     

Characterization,phylogenetic analyses and pathogenicity of Bipolaris setariae associated with brown stripe disease on sugarcane in Yunnan,China

Brown stripe disease is a severe foliar fungal disease of sugarcane worldwide and is widespread in all sugarcane planting areas in China. Brown stripe is a major disease that seriously affects the output and quality of the sugarcane industry in Yunnan Province, China's second-largest sugar base, while the pathogen of this disease remains not yet fully understood. To address this, we isolated and identified the fungi associated with 68 leaf samples showing typical symptoms of brown stripe from 22 sugarcane varieties in different areas of Yunnan Province. A total of 113 isolates were obtained, which were morphologically similar. Of these, 64 representative isolates were sequenced for the internal transcribed spacer region (ITS), GAPDH and EF-1α loci. All representative isolates grouped with the type strain of Bipolaris setariae in the phylogenetic trees inferred with individual and concatenated sequences of ITS, GAPDH and EF1-α. Pathogenicity test results showed that B. setariae strains were able to induce typical symptoms of brown stripe. The results obtained in this study clarify that only B. setariae is associated with sugarcane brown stripe in Yunnan, China. It is recorded here for the first time as a pathogen causing sugarcane brown stripe in Yunnan, and it is able to infect many major cultivars and new varieties, posing a new threat to the sugar industry in Yunnan Province. In addition, these results provide the scientific basis for the future breeding of disease-resistant varieties and effective prevention and control of sugarcane brown stripe disease.     

兰花褐斑病菌实时荧光PCR检测

兰花褐斑病菌(Acidovorax avenaesubsp.cattleyae)是兰花上一种重要进境检疫性有害生物,可通过植株和种子远距离传播,其传染性强,对兰花危害性大。根据核糖体ITS序列设计了TaqMan-MGB探针并建立了实时荧光PCR检测方法。该方法能够特异性检测兰花褐斑病菌,所有供试的目标菌株检测结果均为阳性,而其它28个对照菌株(含同属内其它种及avenae种下其它亚种)均为阴性。利用该方法从发病兰花植株总DNA中检测到该病菌。本方法灵敏度高,检测极限达9×10-9μg DNA,操作方便快速,结果可靠,适合于口岸兰花的进出境检疫及兰花种苗健康质量控制。     

Isolation and genetic characterization of Acidovorax avenae from red stripe infected sugarcane in Northwestern Argentina

Red stripe is a bacterial disease of sugarcane causing important economic losses in Argentina that affects 30 % of the milling stems and consequently the juice quality. In this study, sugarcane leaves exhibiting red stripe symptoms were sampled in the 2008–09 growing season from 13 different sugarcane producing areas of Tucumán and Salta (northwest of Argentina). To achieve the identification and characterization of the causal agent of red stripe, bacterial isolation was performed. Species-specific PCR using Oaf1/Oar1 primers allowed the amplification of a fragment of 550 bp from approximately 50 % of the isolates; 16S rDNA sequences analysis displayed a similarity greater than 99 % with Acidovorax avenae subsp. avenae. By means of RAPD-PCR the presence of at least four different biotypes among the analyzed isolates was detected. Results of pathogenicity test allowed us to confirm A. avenae subsp. avenae as the pathogenic agent for red stripe. This study constitutes the first report on the identification and molecular characterization of this plant pathogen from the Argentina sugarcane production areas. The genetic diversity observed among A. avenae is an important factor to be considered to improve an accurate diagnosis and/or the selection of sugarcane tolerant clones.     

应用蛋白宏阵列快速检测西瓜细菌性果斑病菌

蛋白阵列(Protein array)也叫蛋白芯片,是生物芯片(Biochip)的一种,主要利用抗原/抗体可特异性结合原理制备而成。按阵列样点大小,蛋白阵列又可分为微阵列(Microarray)和宏阵列(Mac-roarray)两类。微阵列集成度极高,可进行高通量     

广西主要蔗区螟虫种类调查与分析

甘蔗螟虫是甘蔗生产中的重要害虫?为掌握目前广西主要蔗区苗期螟虫的主要种类和发生情况, 本研究于2019年4月-5月, 对广西主要蔗区苗期螟害种类及其为害率进行了田间实地调查, 并分析了螟害种类结构的变化?结果表明:在宿根蔗地, 甘蔗苗期黄螟为害最严重, 造成的枯心苗率为5.59%; 其次为条螟, 造成花叶苗率为5.29%; 黄螟为害造成的宿根蔗枯心苗率以桂西南和桂南两大蔗区相对较高, 其平均值分别为7.34%和6.76%; 条螟为害造成的宿根蔗花叶苗率以桂西南蔗区最高, 平均值达7.82%, 桂中和桂南蔗区其次, 其平均值分别为4.59%和4.46%?同一蔗区, 黄螟和条螟在宿根蔗地发生均比新植蔗地严重, 在宿根蔗地平均枯心苗率分别为7.13%和7.99%, 而在新植蔗地分别为2.31%和3.43%?以黄螟枯心苗率为防治指标的达标防治蔗地样点数占比为52.06%, 条螟花叶苗率为防治指标的达标防治蔗地样点数占比为56.16%?广西蔗区甘蔗苗期的主要螟虫为黄螟和条螟, 尤其是黄螟已上升为主要害虫, 表明广西蔗区的优势螟虫种类结构已发生明显变化; 广西南部和西南蔗区的苗期螟害重于北部蔗区; 宿根甘蔗地的螟害重于新植蔗地, 宿根蔗地是螟害防治的重点?     

哈蜜瓜种子带细菌性果斑病菌检测技术的研究

哈蜜瓜细菌性果斑病是世界性的检疫对象之一,主要以种子带菌进行远距离传播,本文通过温室育苗、室内分离和PCR(聚合酶链式反应)技术对哈蜜瓜种子带菌情况和主要带菌部位进行了检验,结果表明:3种方法都可以对种子带菌情况进行检测,分离检测和PCR检测还可以确定种子的带菌部位,PCR技术具有特异性强、灵敏度高、检测时间短等特点.另外检测结果也表明种子带菌以种皮为主,种仁的带菌量较少.