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1.
The present study was conducted to isolate and characterize rhizobial strains from root nodules of cultivated legumes, i.e. chickpea, mungbean, pea and siratro. Preliminary characterization of these isolates was done on the basis of plant infectivity test, acetylene reduction assay, C-source utilization, phosphate solubilization, phytohormones and polysaccharide production. The plant infectivity test and acetylene reduction assay showed effective root nodule formation by all the isolates on their respective hosts, except for chickpea isolate Ca-18 that failed to infect its original host. All strains showed homology to a typical Rhizobium strain on the basis of growth pattern, C-source utilization and polysaccharide production. The strain Ca-18 was characterized by its phosphate solubilization and indole acetic acid (IAA) production. The genetic relationship of the six rhizobial strains was carried out by random amplified polymorphic DNA (RAPD) including a reference strain of Bradyrhizobium japonicum TAL-102. Analysis conducted with 60 primers discriminated between the strains of Rhizobium and Bradyrhizobium in two different clusters. One of the primers, OPB-5, yielded a unique RAPD pattern for the six strains and well discriminated the non-nodulating chickpea isolate Ca-18 from all the other nodulating rhizobial strains. Isolate Ca-18 showed the least homology of 15% and 18% with Rhizobium and Bradyrhizobium, respectively, and was probably not a (Brady)rhizobium strain. Partial 16S rRNA gene sequence analysis for MN-S, TAL-102 and Ca-18 strains showed 97% homology between MN-S and TAL-102 strains, supporting the view that they were strains of B. japonicum species. The non-infective isolate Ca-18 was 67% different from the other two strains and probably was an Agrobacterium strain. 相似文献
2.
E. E. Radchenko T. L. Kuznetsova M. A. Chumakov I. G. Loskutov 《Genetic Resources and Crop Evolution》2018,65(2):571-576
Among 371 oat accessions from the world collection of the Vavilov Institute of Plant Genetic Resources (VIR) mostly represented by the landraces from Asia (Maritime Territory of Russian Federation, Mongolia, China, Japan, North Korea, India, Iran, Afghanistan, and Bhutan) ninety five were heterogeneous for resistance to the North Caucasus populations of the greenbug (Schizaphis graminum Rondani). Damage ratings of resistance in 47 accessions were high, low level of resistance was identified in 48 genotypes. Higher frequency of greenbug resistant accessions (60.5%) was found among landraces from Mongolia. Lines with high expression of the resistance were selected from seven landraces with wide range of damage ratings. North Caucasus populations of S. graminum from Krasnodar area and Dagestan significantly differ by the frequencies of virulence to host plant. Seven virulence phenotypes differentially interacting with oat genotypes were found in the Krasnodar population and 10 phenotypes were revealed in the Dagestan population. Results of the experiments with the greenbug test clones revealed that all the lines selected from the accessions VIR-2490, VIR-2539, VIR-4074, VIR-12213, VIR-12214 (Mongolia), VIR-6688 (India) and VIR-13624 (North Korea) are protected by diverse alleles of resistance genes which differ from the earlier identified gene Grb3. These lines are supposed to have aphid resistance genes nonidentical to the Grb1 and Grb2. The accessions VIR-6688, VIR-4074 and VIR-12214 possess high resistance to Krasnodar and Dagestan greenbug populations and the accession VIR-13624 is protected by the most effective gene (genes) of resistance to the both populations from North Caucasus. 相似文献
3.
Wheat landrace populations, collected from different altitudes of three regions of Turkey, were evaluated for variation within
and among populations. Experimental material consisted of 380 accessions, from nine provinces, in Central Anatolian Plateau
and North Transitions. The material was grown at Haymana-Ankara Research Farm of Central Research Institute for Field Crops
in 1999–2000 planting season, in a three-meter, two-row-plot trial with three bread and three durum wheat checks. Populations
were evaluated for plant height, tillers number, spike length, grains per spike, awn length, thousand kernels weight (TKW),
winter survival, and days to flowering. Observations and measurements were performed on five randomly selected plants in each
plots. Mean, coefficient of variation (CV), and range were computed for populations from five altitude intervals of 0–399,
400–799, 800–1199, 1200–1599, and 1600–1999 m, and geographical regions. Correlation, principal component (CPC) and cluster
analyses were performed later. The highest variation was recorded for awn length and the lowest for number of days to flowering.
First three principal components (PCs) accounted for 60.69% of the total variation. Cluster analysis for bread wheat, durum
wheat, cultivated einkorn and cultivated emmer grouped the species meaningfully. 相似文献
4.
Tânia Luz Palma Mbagag Neba Donaldben Maria Clara Costa Jorge Dias Carlier 《Water, air, and soil pollution》2018,229(6):200
Paracetamol, the most widely and globally used analgesic and antipyretic, is easily accumulated in aquatic environments. In the present study, the biodegradation of paracetamol in different media (one for general growth, one specific for sulfate reducing bacteria, a mineral salts medium and municipal wastewater) inoculated with two types of sludge (from anaerobic lagoon and from oxidation ditch) under different oxygenic conditions (anoxic; moderate oxygenation in open flasks and high oxygenation by aeration) was investigated. In addition, bacteria with relative abundances increasing simultaneously with paracetamol degradation, when this drug was the only carbon source, thus with a putative role in its degradation, were identified using 16S rRNA gene sequences. The results show that aerobic microorganisms had a major role in the degradation of paracetamol, with 50 mg/L totally removed from municipal wastewater after 2 days incubation with aeration, and that the metabolites 4-aminophenol and hydroquinone plus one compound not identified in this work were produced in the process. The identification of bacteria with a role in the degradation of paracetamol revealed a strain from genus Pseudomonas with the highest final relative abundance of 21.2%, confirming previous works reporting strains of this genus as paracetamol decomposers. Besides, genera Flavobacterium, Dokdonella and Methylophilus were also in evidence, with initial relative abundances of 1.66%, 1.48 and 0.00% (not detected) in the inoculum and 6.91%, 3.80 and 3.83% after incubation, respectively. Therefore, a putative role of these genera in paracetamol biodegradation is suggested for the first time. 相似文献
5.
Houyang Kang Meiyu Zhong Quan Xie Haiqin Zhang Xing Fan Lina Sha Lili Xu Yonghong Zhou 《Genetic Resources and Crop Evolution》2012,59(3):445-453
Trigeneric hybrids may help establish evolutionary relationships among different genomes present in the same cellular-genetic
background, and also offers the possibility to transfer different alien characters into cultivated wheat. In this study, a
new trigeneric hybrid involving species from the Triticum, Psathyrostachys and Secale was synthesized by crossing wheat-P. huashanica amphiploid (PHW-SA) with wheat-S. cereale amphiploid (Zhongsi 828). The crossability of F1 hybrid was high with 35.13%, and the fertility was 41.95%. The morphological characteristics of F1 plants resembled the parent Zhongsi 828. The trigeneric hybrids pollen mother cells (PMCs) regularly revealed averagely 19.88
univalents, 9.63 ring bivalents, 3.97 rod bivalents, 0.60 trivalents and 0.03 tetravalents per cell. Multivalents consisted
of trivalents and tetravalents can be observed in 52.7% of cells. A variation of abnormal lagging chromosome, micronuclei
and chromosome bridge were formed at anaphase I and telophase II. The mean chromosomes number of F2 progenies was 2n = 46.13, and the distribution range was 42–53. GISH results revealed that most F2 plants had 6–12 S. cereale chromosomes, and only 0–2 P. huashanica chromosomes were detected. The results indicated that S. cereale chromosomes can be preferentially transmitted in the F2 progenies of trigeneric hybrid than P. huashanica chromosomes. A survey of disease resistances revealed that the stripe rust resistance from the PHW-SA were completely expressed
in the F1 and some F2 plants. The trigeneric hybrid could be a useful bridge for the transference of P. huashanica and S. cereale chromatins to common wheat. 相似文献
6.
Amina Sirag Saied Jens Gebauer Karl Hammer Andreas Buerkert 《Genetic Resources and Crop Evolution》2008,55(7):929-937
Neglected and underutilized species often play a vital role in securing food and livestock feed, income generation and energy
needs of rural populations. In spite of their great potential little attention has been given to these species. This increases
the possibility of genetic erosion which would further restrict the survival strategies of people in rural areas. Ziziphus spina-christi is a plant species that has edible fruits and a number of other beneficial applications that include the use of leaves as
fodder, branches for fencing, wood as fuel, for construction and furniture making, and the utilization of different parts
e.g. Fruits, leaves, roots and bark in folk medicine. Moreover, the plant is adapted to dry and hot climates which make it
suitable for cultivation in an environment characterized by increasing degradation of land and water resources. Lack of research
in Z. spina-christi hinders its successful improvement and promotion. Therefore, studies are needed to fully exploit this species. This article
aims at summarizing information on different aspects of Z. spina-christi to stimulate interest in this crop which is of importance in Sudan and other countries of the semi-arid tropics.
相似文献
Amina Sirag SaiedEmail: |
7.
Valéria Marino Rodrigues Sala Elke Jurandy Bran Nogueira Cardoso Fabiana Fantinatti Garboggini Neusa de Lima Nogueira Adriana Parada Dias da Silveira 《Biology and Fertility of Soils》2008,44(8):1107-1112
This study reports for the first time the presence of diazotrophic bacteria belonging to the genera Achromobacter and Zoogloea associated with wheat plants. These bacterial strains were identified by the analysis of 16S rDNA sequences. The bacterium
IAC-AT-8 was identified as Azospirillum brasiliense, whereas isolates IAC-HT-11 and IAC-HT-12 were identified as Achromobacter insolitus and Zoogloea ramigera, respectively. A greenhouse experiment involving a non-sterilized soil was carried out with the aim to study the endophytic
feature of these strains. After 40 days from inoculation, all the strains were in the inner of roots, but they were not detected
in soil. In order to assess the location inside wheat plants, an experiment was conducted under axenic conditions. Fifteen
days after inoculation, preparations of inoculated plants were observed by the scanning electron microscope, using the cryofracture
technique, and by the transmission electron microscope. It was observed that all isolates were present on the external part
of the roots and in the inner part at the elongation region, in cortex cells, but not in the endodermis or in the vascular
bundle region. No colonizing bacterial cells were observed in wheat leaves. 相似文献
8.
Calamintha nepeta and Micromeria thymifolia have been traditionally used in the Mediterranean area as condiments and medicinal plants for a long time. Whereas in parts of Italy C. nepeta (special recipes have been developed in Lazio and Tuscany) is also an established garden plant showing different evolutionary products and their interaction among each other and the wild progenitor, M. thymifolia is being developed into a new crop plant. Both plants and their uses are described with regard to Italy. There is a marked tendency to broaden the use of condiments and spices which results in new crop plants which have to be documented and elaborated in further studies. Many species of Labiatae are predisposed to use by man and new items can be found even in areas which have to be considered as well studied. 相似文献
9.
Chinnaswamy Appunu Narayanasamy Sasirekha Vaiyapuri Ramalingam Prabavathy Sudha Nair 《Biology and Fertility of Soils》2009,46(1):57-63
The diversity among 269 rhizobia isolated from naturally occurring root nodules of soybean collected from two different agro-ecological
regions of India, based on RFLP and sequences of the intergenic spacer (IGS) between the 16S and 23S rRNA genes, growth rate,
and indole acetic acid production, revealed their significant, site-dependent genomic diversity. Among these bacteria, nine
IGS genotypes were identified with two endonucleases. They were distributed into five divergent lineages by sequence analysis
of each IGS representative strain, i.e., (1) comprising IGS genotypes I, II, III, and reference Bradyrhizobium yuanmingense; (2) with genotype IV and strains of unclassified bradyrhizobia genomic species; (3) including genotypes V, VI, and Bradyrhizobium liaoningense; (4) with IGS genotype VII and Bradyrhizobium elkanii strains; and (5) comprising IGS genotypes VIII, IX, and different Ensifer genus bacteria. Host-specificity test revealed that all rhizobia-nodulated soybean and cowpea and only part of them formed
nodules on Arachis hypogeae and Cajanus cajan. The great diversity of soybean nodulators observed in this study emphasises that Indian soil is an important reservoir of
nitrogen-fixing rhizobia. 相似文献
10.
11.
This study aimed to investigate the effect of inoculation with plant growth-promoting Rhizobium and Pseudomonas species on NaCl-affected maize. Two cultivars of maize (cv. Agaiti 2002 and cv. Av 4001) selected on the basis of their yield
potential were grown in pots outdoors under natural conditions during July. Microorganisms were applied at seedling stage
and salt stress was induced 21 days after sowing and maintained up to 50% flowering after 120 days of stress. The salt treatment
caused a detrimental effect on growth and development of plants. Co-inoculation resulted in some positive adaptative responses
of maize plants under salinity. The salt tolerance from inoculation was generally mediated by decreases in electrolyte leakage
and in osmotic potential, an increase in osmoregulant (proline) production, maintenance of relative water content of leaves,
and selective uptake of K ions. Generally, the microbial strain acted synergistically. However, under unstressed conditions,
Rhizobium was more effective than Pseudomonas but under salt stress the favorable effect was observed even if some exceptions were also observed. The maize cv. Agaiti
2002 appeared to be more responsive to inoculation and was relatively less tolerant to salt compared to that of cv. Av 4001. 相似文献
12.
Genetic diversity of populations stored ex situ or in situ can be altered due to the management practices they are subjected
to. In this paper, we compare populations of two common bean (Phaseolus vulgaris L.) landraces grown on farms with material
collected from the same farms and now kept in two ex situ collections (CIAT and REGEN) with the purpose to monitor any changes
that have occurred due to ex situ conservation. The diversity was measured using seven bean microsatellite markers. Further
phenotypic and developmental traits were registered in a field experiment. Compared with the in situ populations, the ex situ
ones had a lower level of gene diversity and we suggest that this is due to the regeneration process. Most of the phenotypic
traits did not differ significantly between ex situ and in situ populations, although for yield and 100-seed weight, the CIAT
material showed significant lower values. We assume that these populations have gone through an adaptational change. Overall,
the conservation ex situ has been successful in maintaining the majority of the adaptations found in the landraces studied,
however, the probable loss of genetic diversity that we have observed, suggest that protocols for the regeneration process
must be carefully worked out if the majority of alleles are to be preserved for the future. This study also highlights the
complementarity of ex situ and in situ conservation methods in order to preserve landrace adaptations and to capture new,
useful diversity generated in in situ populations. 相似文献
13.
The genus Arachis is divided into nine taxonomic sections. Section Arachis is composed of annual and perennial species, while section Heteranthae has only annual species. The objective of this study was to investigate the genetic relationships among 15 Brazilian annual
accessions from Arachis and Heteranthae using RAPD markers. Twenty-seven primers were tested, of which nine produced unique fingerprintings for all the accessions
studied. A total of 88 polymorphic fragments were scored and the number of fragments per primer varied from 6 to 17 with a
mean of 9.8. Two specific markers were identified for species with 2n = 18 chromosomes. The phenogram derived from the RAPD data corroborated the morphological classification. The bootstrap analysis
divided the genotypes into two significant clusters. The first cluster contained all the section Arachis species, and the accessions within it were grouped based upon the presence or absence of the ‘A’ pair and the number of chromosomes.
The second cluster grouped all accessions belonging to section Heteranthae. 相似文献
14.
Cowpea landraces belonging to Vigna
unguiculata (L.) Walp. subsp. unguiculata cv.-gr. unguiculata and cv.-gr. sesquipedalis collected from part of the Deccan Plateau and West Coast of India were evaluated to (i) identify the diverse source(s) of
variation for improved characters like pods/peduncle and seed index (ii) study the response of landraces for adaptation to
drought and heat stress and (iii) understand the breeding value of a landrace in the genetic improvement of a popular cowpea
cultivar. Landraces were evaluated for various morphological characters, pods/peduncle, seed index and other economically
important agronomic traits, rust resistance and drought and heat tolerance in different years and environments. Landraces
were found as an important source of genetic variability for pods/plant, pods/peduncle, better pod filling ability (seed index),
grain yield/plant as well as drought and heat tolerance and rust resistance. Hybridization between C 152 (cv.) and DWDCC 016
(landrace) resulted in release of new variation not present in the two parents. Thus the landrace, DWDCC 016, can be utilized
to improve cultivated varieties by transferring to them the economically valuable traits like pods/peduncle and seed index
thereby enhancing realisation of sink potential and ultimately grain yield in a sustainable way. 相似文献
15.
Bio-fertilizer application has been proposed as a strategy for enhancing soil fertility, regulating soil microflora composition, and improving crop yields, and it has been widely applied in the agricultural yields. However, the application of bio-fertilizer in grassland has been poorly studied. We conducted in situ and pot experiments to investigate the practical effects of different fertilization regimes on Leymus chinensis growth, with a focus on the potential microecological mechanisms underlying the responses of soil microbial composition. L. chinensis biomass was significantly (P?<?0.05) increased by treatment with 6000 kg ha?1 of Trichoderma bio-fertilizer compared with other treatments. We found a positive (R2 =?0.6274, P <?0.001) correlation between bacterial alpha diversity and L. chinensis biomass. Hierarchical cluster analysis and nonmetric multidimensional scaling (NMDS) revealed that soil bacterial and fungal community compositions were all separated according to the fertilization regime used. The relative abundance of the most beneficial genera in bio-fertilizer (BOF) (6000 kg ha?1Trichoderma bio-fertilizer) was significantly higher than in organic fertilizer (OF) (6000 kg ha?1 organic fertilizer) or in CK (non-amend fertilizer), there the potential pathogenic genera were reduced. There were significant negative (P?<?0.05) correlations between L. chinensis biomass and the relative abundance of several potential pathogenic genera. However, the relative abundance of most beneficial genera were significantly (P?<?0.05) positively correlated with L. chinensis biomass. Soil properties had different effects on these beneficial and on these pathogenic genera, further influencing L. chinensis biomass. 相似文献
16.
V. rhomboidea is a wild Vigna species that is a potential source of genes for pubescence which could be incorporated into
cultivated cowpea for insect pests resistance. Due to the lack of reliable records on the crossability and gene pool relationships
between V. rhomboidea and cowpea, crossing trials were conducted in the screenhouse to observe if V. rhomboidea is reciprocally
crossable (compatible) with cowpea. Crossability of V. rhomboidea (as seed parent) with cowpea (as pollen parent) was, for
the first time, successfully achieved at the rate of 5.7% from 1145 crosses. Reciprocal crosses with cowpea as seed parent
and V. rhomboidea pollen parent gave an average of 22.6% pod set from 2299 crosses. It is concluded that V. rhomboidea is
reciprocally compatible with cowpea. This implies that V. rhomboidea belongs to the primary gene pool of cowpea. 相似文献
17.
Cengiz Korkmaz Özcan Ay Coşkun Çolakfakioğlu Bedii Cicik Cahit Erdem 《Water, air, and soil pollution》2017,228(8):315
Edible muscle tissues of Solea solea, Mullus barbatus, and Sardina pilchardus marketed in Mersin were analyzed for their Cr (total), Mn, Fe, Ni, Cu, Zn, As (total), Cd, Sn, and Pb levels. Metal levels of the tissues were determined using inductively coupled plasma-mass spectrophotometric (ICP-MS) methods. Muscle levels of Cr, Mn, Fe, Ni, Cu, Zn, As, Sn, and Pb were determined as 0.19–2.80, 0.08–3.88, 0.93–25.76, 0.03–0.63, 0.01–1.96, 1.28–45.95, 0.49–25.26, 0.14–4.03, and 0.02–1.37 mg kg?1 w.w., respectively. Cadmium levels were below detection limits in all the muscle samples taken. Mean metal levels of the tissues were compared with the provisional tolerable daily (PTDs) and weekly (PTWIs) intake limits. Mean metal levels taken by the consumption of analyzed tissues were below PTDs and PTWIs; hence, the fish species studied do not pose any risk for human consumption from the point of heavy metals. 相似文献
18.
Miguel João G. Santos Amadeu M. V. M. Soares Susana Loureiro 《Journal of Soils and Sediments》2011,11(6):990-999
Purpose
Few studies have been conducted to evaluate the effects of mixtures of chemicals in terrestrial environment. Thus, it seems important to evaluate if the combined application of pesticides currently used in agricultural fields may pose a risk to terrestrial plants. 相似文献19.
Lihua Yao Xiaoyan Zheng Danying Cai Yuan Gao Kun Wang Yufen Cao Yuanwen Teng 《Genetic Resources and Crop Evolution》2010,57(6):841-851
A total of 8117 suitable SSR-contaning ESTs were acquired by screening from a Malus EST database, among which dinudeotide SSRs were the most abundant repeat motif, within which, CT/TC followed by AG/GA were
predominant. Based on the suitable sequences, we developed 147 SSR primer pairs, of which 94 pairs gave amplifications within
the expected size range while 65 pairs were found to be polymorphic after a preliminary test. Eighteen primer pairs selected
randomly were further used to assess genetic relationship among 20 Malus species or cultivars. As a result, these primers displayed high level of polymorphism with a mean of 6.94 alleles per locus
and UPGMA cluster analysis grouped twenty Malus accessions into five groups at the similarity level of 0.6800 that were largely congruent to the traditional taxonomy. Subsequently,
all of the 94 primer pairs were tested on four accessions of Pyrus to evaluate the transferability of the markers, and 40 of 72 functional SSRs produced polymorphic amplicons from which 8
SSR loci selected randomly were employed to analyze genetic diversity and relationship among a collection of Pyrus. The 8 primer pairs produced expected bands with the similar size in apples with an average of 7.375 alleles per locus. The
observed heterozygosity of different loci ranged from 0.29 (MES96) to 0.83 (MES138), with a mean of 0.55 which is lower than 0.63 reported in genome-derived SSR marker analysis in Pyrus. The UPGMA dendrogram was similar to the previous results obtained by using RAPD and AFLP markers. Our results showed that
these EST-SSR markers displayed reliable amplification and considerable polymorphism in both Malus and Pyrus, and will contribute to the knowledge of genetic study of Malus and genetically closed genera. 相似文献
20.
Complete sequences of transcribed spacers and introns from the trnT trnF region of chloroplast DNA (cp DNA) were generated from Musaceae species to establish the phylogenetic relationships among
3 species of Ensete including the economically important Ensete ventricosum (Welw.) Cheesman and 13 species of Musa. Parsimony analysis and pair wise distance data produced a single tree, with Ensete and Musa as clearly distinguished clades. Six Musa and three Ensete clades were generated. The topology of these clades did not change when the data were split into spacers and introns, although
the split resulted in poor bootstrap support. Removing a hotspot from the entire data set improved clade support. The clades
produced are discussed with reference to existing taxonomic and phylogenetic treatments. In contrast to previous suggestions,
most of the Rhodochlamys species that we investigated clustered together with strong support establishing their distinctiveness
from the Musa species studied. Ensete glaucum (Roxb.) Cheesman and Musa beccartii Simmonds appear to represent ancestral forms of Ensete and Musa, respectively for the presently studied species, and both genera have a common ancestor that is yet to be established. Our
data also show that E. ventricosum cannot be reduced to E. glaucum, nor can E. gilleti (De Wild.) Cheesman be reduced to E. ventricosum, as some authorities have suggested. Ensete gilleti or a species very close to it appears to be the ancestral species of E. ventricosum. 相似文献