CLPP and EEA profiles of microbial communities in salt marsh sediments

Objective  Microbial communities are a central component of trophic dynamics and biogeochemical processes on coastal systems, since most of the processes in sediments are mediated by microorganisms and carried out by enzymes. Microorganisms play a key role in decomposition processes in salt marsh sediments, although the significance of microbial dynamics is largely unexplored. A culture-dependent (Ecoplate) and a culture-independent (extracellular enzyme activity [EEA]) approaches were evaluated in their ability to distinguish the catabolic potential among sediments from Tagus estuary salt marshes with different proximities to anthropogenic sources. Methods  Ecoplate was used to analyse the salt marsh community-level physiological profiles (CLPPs). Results were expressed as the net area under the curve for each of the 31 response wells over a 3-day incubation period in two sediment horizons. The catabolic profiles for salt marsh samples were analysed by Principal Component Analysis (PCA) and hierarchic clustering methods. EEA was analysed by fluorescein diacetate (FDA) hydrolysis in two sediment horizons. The FDA is catalysed by extracellular enzymes, i.e. esterases, lipases and partially by proteases. Results were expressed as μg g⁻¹d wt h⁻¹. Results and Discussion  In this study the CLPP and EEA data were not generally correlated. In Corroios salt marsh only in surface sediments higher net areas corresponded to higher extracellular enzymatic activity, and in Alcochete deep sediments lower net areas corresponded to lower enzymatic activity. Although EEA profiles more directly reflect the inherent activity of resident community in each salt marsh sample, the CLPP profiles provide better assessments of diversity. ESS-Submission Editor: Prof. Dr. Peter Schroeder, Institute of Soil Ecology, Department of Rhizosphere Biology, GSF — National Research Center for Environment & Health, Ingolstaedter Landstrasse 1, 85758 Neuherberg, Germany (peter.schroeder@gsf.de)     

Relative role of soil nutrients vs. carbon availability on soil carbon mineralization in grassland receiving long-term N addition

High nitrogen (N) input often induces soil carbon (C) limitation, eutrophication of macronutrients, deficiency of base cations, and accumulation of toxic micronutrients. These changes are perceived to be critical factors in regulating soil C mineralization. Previous studies primarily focused on the individual effects of C, macronutrients, exchangeable base cations, and micronutrients on soil C mineralization. However, the relative importance of those factors in regulating soil C mineralization, especially in N-enriched ecosystems, remains unclear. To disentangle the relative contributions of aforementioned factors, lime and/or glucose were added to soils that were collected from a field experiment with historical N addition (6 years) at seven rates (0–50 g N m⁻² year⁻¹) in a grassland ecosystem. Lime and glucose were added to improve the soil C and key nutrient conditions. The responses of soil C mineralization rate to changes in soil C and macronutrients (N and P), exchangeable base cations (K⁺, Na⁺ and Mg²⁺), and micronutrients (Fe²⁺, Mn²⁺, Cu²⁺ and Zn²⁺) were examined. We found that lime addition decreased soil micronutrients, while glucose addition improved the soil available P and exchangeable base cations, especially at high historical N addition rates. The soil C mineralization was weakly associated with changes in soil nutrients, including the availability of N, P, exchangeable base cations, and micronutrients, which were conventionally and previously considered as the vital drivers of soil C mineralization. However, soil C mineralization strongly increased with glucose-induced enhancement of C availability and the subsequent enhancement of microbial biomass under increasing N addition rates. Based on the Structural Equation Model, the standardized total effects of C, macronutrients (N and P), base cations and micronutrients on soil C mineralization were 0.86, − 0.29, 0.15 and − 0.08, respectively. Findings from this study demonstrated that the N-induced significant changes in soil nutrients (e.g., eutrophication of N and P, base cations deficiency and accumulation of toxic macronutrients) mediated soil C mineralization, with C availability being the most critical driver for C mineralization in N-enriched soil. This study provides insight into the mechanistic understanding of the relationship between N input and terrestrial C cycling.     

Response of soil microbial communities to compost amendments

Soil organic matter is considered as a major component of soil quality because it contributes directly or indirectly to many physical, chemical and biological properties. Thus, soil amendment with composts is an agricultural practice commonly used to improve soil quality and also to manage organic wastes. We evaluated in laboratory scale experiments the response of the soilborne microflora to the newly created soil environments resulting from the addition of three different composts in two different agricultural soils under controlled conditions. At a global level, total microbial densities were determined by classical plate count methods and global microbial activities were assessed by measuring basal respiration and substrate induced respiration (SIR). Soil suppressiveness to Rhizoctonia solani diseases was measured through bioassays performed in greenhouses. At a community level, the modifications of the metabolic and molecular structures of bacterial and fungal communities were assessed. Bacterial community level physiological profiles (CLPP) were determined using Biolog™ GN microtiter plates. Bacterial and fungal community structures were investigated using terminal restriction fragment length polymorphism (T-RFLP) fingerprinting. Data sets were analyzed using analysis of variance and ordination methods of multivariate data. The impact of organic amendments on soil characteristics differed with the nature of the composts and the soil types. French and English spent mushroom composts altered all the biological parameters evaluated in the clayey soil and/or in the sandy silty clay soil, while green waste compost did not modify either bacterial and fungal densities, SIR values nor soil suppressiveness in any of the soils. The changes in bacterial T-RFLP fingerprints caused by compost amendments were not related to the changes in CLPP, suggesting the functional redundancy of soil microorganisms. Assessing the density, the activity and the structure of the soil microflora allowed us not only to detect the impact of compost amendment on soil microorganisms, but also to evaluate its effect at a functional level through the variation of soil disease suppressiveness. Differences in disease suppressiveness were related to differences in chemical composition, in availability of nutrients at short term and in microbial composition due to both incorporation and stimulation of microorganisms by the compost amendments.     

Long-term effects of compost amendment of soil on functional and structural diversity and microbial activity

We studied the effects of applying different composts (urban organic waste, green waste, manure and sewage sludge), mineral fertilizer and compost plus mineral fertilizer on chemical, biological and soil microbiological parameters over a 12‐year period. The organic C and total N levels in soils were increased by all compost and compost + N treatments. Microbial biomass C was significantly (P ≤ 0.05) increased for some compost treatments. In addition, basal respiration and the metabolic quotient (qCO₂) were significantly higher in all soils that had received sewage sludge compost. The Shannon diversity index (H), based on community level physiological profiling, showed a higher consumption of carbon sources in soils treated with compost and compost + N compared with the control. The utilization of different guilds of carbon sources varied amongst the treatments (compost, compost + N or mineral fertilizer). Cluster analysis of polymerase chain reaction‐denaturing gradient gel electrophoresis patterns showed two major clusters, the first containing the mineral fertilization and compost treatments, and the second, the composts + N treatments. No differences in bacterial community structure could be determined between the different types of compost. However, the results suggest that long‐term compost treatments do have effects on the soil biota. The results indicate that the effects on the qCO₂ may be due to shifts in community composition. In this study, it was not possible to distinguish with certainty between the effects of different composts except for compost derived from sewage sludge.     

Experimental nitrogen deposition alters the quantity and quality of soil dissolved organic carbon in an alpine meadow on the Qinghai-Tibetan Plateau

Dissolved organic matter (DOM) plays a central role in driving biogeochemical processes in soils, but little information is available on the relation of soil DOM dynamics to microbial activity. The effects of NO₃⁻ and NH₄⁺ deposition in grasslands on the amount and composition of soil DOM also remain largely unclear. In this study, a multi-form, low-dose N addition experiment was conducted in an alpine meadow on the Qinghai–Tibetan Plateau in 2007. Three N fertilizers, NH₄Cl, (NH₄)₂SO₄ and KNO₃, were applied at four rates: 0, 10, 20 and 40 kg N ha⁻¹ yr⁻¹. Soil samples from surface (0–10 cm) and subsurface layers (10–20 cm) were collected in 2011. Excitation/emission matrix fluorescence spectroscopy (EEM) was used to assess the composition and stability of soil DOM. Community-level physiological profile (CLPP, basing on the BIOLOG Ecoplate technique) was measured to evaluate the relationship between soil DOC dynamics and microbial utilization of C resources. Nitrogen (N) dose rather than N form significantly increased soil DOC contents in surface layer by 23.5%–35.1%, whereas it significantly decreased soil DOC contents in subsurface layer by 10.4%–23.8%. Continuous five-year N addition significantly increased the labile components and decreased recalcitrant components of soil DOM in surface layer, while an opposite pattern was observed in subsurface layer; however, the humification indices (HIX) of soil DOM was unaltered by various N treatments. Furthermore, N addition changed the amount and biodegradability of soil DOM through stimulating microbial metabolic activity and preferentially utilizing organic acids. These results suggest that microbial metabolic processes dominate the dynamics of soil DOC, and increasing atmospheric N deposition could be adverse to the accumulation of soil organic carbon pool in the alpine meadow on the Qinghai-Tibetan Plateau.     

Effect of grazing intensity and soil characteristics on soil organic carbon and nitrogen stocks in a temperate long-term grassland

The effects of different grazing pressures (GPs) on soil properties are not sufficiently understood. The objectives were to analyse the effects of three different extensive GPs on stocks of soil organic C and total N, soil microbial biomass C, basal respiration and mineral N in three different soil depths of a long-term pasture in Central Germany (FORBIOBEN field trial). No significant (p ≤ 0.05) effects of GP on weighted stocks of soil organic C, total N, soil microbial biomass C, mineral N and basal respiration rate were observed, suggesting that the C and N cycles are coupled in the three grazing treatments. Oxalate soluble Fe contents explained a marked part of the variation of soil organic C (multiple linear regression: R² = 0.64) and total N contents (R² = 0.64) in the soils, whereas almost all of the variability of soil microbial biomass C contents and basal respiration was explained by soil organic C contents. Overall, variabilities of soil organic C and N contents were largely explained by oxalate soluble Fe contents, whereas grazing intensity did not affect the C and N dynamics.     

Parallel shifts in plant and soil microbial communities in response to biosolids in a semi-arid grassland

Approximately 70,150 dry Mg of biosolids from over 450 wastewater treatment facilities are applied to the semi-arid rangelands of Colorado every year. Research on semi-arid grassland responses to biosolids has become vital to better understand ecosystem dynamics and develop effective biosolids management strategies. The objectives of this study were to determine the long-term (∼12 years) effects of a single biosolids application, and the short-term (∼2 years) effects of a repeated application, on plant and microbial community structure in a semi-arid grassland soil. Specific attention was paid to arbuscular mycorrhizal fungi (AMF) and linkages between shifts in plant and soil microbial community structures. Biosolids were surface applied to experimental plots once in 1991 (long-term plots) and again to short-term plots in 2002 at rates of 0, 2.5, 5, 10, 21, or 30 Mg ha⁻¹. Vegetation (species richness and above-ground biomass), soil chemistry (pH, EC, total C, total N, and extractable P, NO₃-N, and NH₄-N), and soil microbial community structure [ester-linked fatty acid methyl esters (EL-FAMEs)], were characterized to assess impacts of biosolids on the ecosystem. Soil chemistry was significantly affected and shifts in both soil microbial and plant community structure were observed with treatment. In both years, the EL-FAME biomarker for AMF decreased with increasing application rate of biosolids; principal components analysis of EL-FAME data yielded shifts in the structure of the microbial communities with treatment primarily related to the relative abundance of the AMF specific biomarker. Significant (p≤0.05) correlations existed among biomarkers for Gram-negative and Gram-positive bacteria, AMF and specific soil chemical parameters and individual plant species' biomass. The AMF biomarker was positively correlated with biomass of the dominant native grass species blue grama (Bouteloua gracilis [Willd. ex Kunth] Lagasca ex Griffiths) and was negatively correlated with western wheatgrass (Agropyron smithii Rydb.) biomass. This study demonstrated that applications of biosolids at relatively low rates can have significant long-term effects on soil chemistry, soil microbial community structure, and plant community species richness and structure in the semi-arid grasslands of northern Colorado. Reduced AMF and parallel shifts in the soil microbial community structure and the plant community structure require further investigation to determine precisely the sequence of influence and resulting ecosystem dynamics.     

添加秸秆对水稻产量和土壤碳氮及微生物群落的影响

为探究添加秸秆对黄筋泥田水稻产量和土壤碳、氮含量和微生物学特性的影响,设计了5个处理,即不添加秸秆和生物炭（CK）、添加秸秆（ST）、添加秸秆和腐熟剂1号（SB1）、添加秸秆和腐熟剂2号（SB2）和添加秸秆生物炭（SC）的水稻盆栽试验,分析水稻产量和土壤全碳、全氮、腐殖质含量和磷脂脂肪酸含量。结果表明：与CK相比,ST、SB1、SB2和SC均能提高水稻产量（P<0.05）,其中SB2增产55.73%;ST、SB1、SB2和SC也提高土壤全碳、全氮、腐殖质含量、细菌磷脂脂肪酸含量、真菌磷脂脂肪酸含量和总磷脂脂肪酸含量（P<0.05）,其中SC土壤全碳提高31.36%,SB2土壤全氮提高40%,SB1腐殖质含量增加50.01%,而SB1和SB2的细菌磷脂脂肪酸含量、真菌磷脂脂肪酸含量和总磷脂脂肪酸含量增加86.49%～401.59%。因此,添加秸秆可以增加水稻产量,提高土壤全碳、全氮和腐殖质的含量,改善土壤微生物群落结构。     

The contribution of soil organic matter fractions to carbon and nitrogen mineralization and microbial community size and structure

The aims of this study were to: (i) assess the impact of hay and fertilizer application on organic matter (OM) fractions (dissolved organic matter (DOM), light fraction organic matter (LFOM, <1.0 g cm⁻³), heavy fraction OM (HFOM, <1.7 g cm⁻³)), carbon (C) and nitrogen (N) cycling processes and microbial community size and structure, and (ii) quantify the role of OM fractions to C and N cycling. Soil was collected in 2001 from a field experiment to which grass hay (1996) and/or fertilizer (1995 and 1999) had previously been applied. DOM-C (P<0.05) and DOM-N (P=0.07) were significantly higher in control and fertilized soil than hay and hay+fertilized soil. LFOM and HFOM C and N contents and C/N ratios were significantly (P<0.05) higher in hay+fertilized and hay amended soil than in control and fertilized soil. Potentially mineralizable-N (PMN), microbial biomass-C (MB-C), microbial biomass-N (MB-N) and microbial respiration (CO₂) were not affected by fertilizer and/or hay application. Gross N mineralization (Gross Min) and gross nitrification (Gross Nit) rates were significantly (P<0.05) higher in fertilized, hay, hay+fertilized soil than control soil. However, there was no significant difference between treatments in gross N immobilization rates. Results reported here highlight the importance of a labile fraction of the DOM pool to N and C cycling as its removal significantly (P<0.05) reduced PMN, MB-N, Gross Min and Gross Nit compared with whole soil in most or all treatments. In soil where DOM+LFOM were removed PMN was significantly (P<0.05) lower, but MB-C, Gross Min and Gross Nit was significantly (P<0.05) higher than in DOM removed soil. This suggests that LFOM plays an important role as a sink for mineral-N. Total soil phospholipid fatty acid (PLFA) concentration was significantly (P<0.05) higher in hay amended than control, fertilized and hay+fertilized soil. Principal components analysis was able to clearly discriminate between control, fertilized, hay+fertilized and hay amended soil. Soil amended with hay or fertilizer had a microbial community structure which differed from that of the control or hay+fertilized soils. Redundancy analysis with Monte Carlo permutation tests revealed that PLFA profiles were strongly correlated to differences in Gross Min, Gross Nit, MB-N, MB-C, MB-C/N ratio, total soil C and total soil C/N ratio. The results of this research suggest that changes in microbial structure are related to aspects of soil C and N pools and cycling.     

Comparative study of the microbial diversity of bulk paddy soil of two rice fields subjected to organic and conventional farming

Two adjacent paddies of an experimental rice field, subjected to organic and conventional farming, were characterized aiming the comparative assessment of microbiological variations occurring in the bulk paddy soil over the rice cycle. This study comprehended the simultaneous characterization of general physicochemical soil properties [total carbon and nitrogen, pH (H₂O and KCl), C:N ratio and water content], biochemical properties [enzymatic activities and Community Level Physiological Profiles (CLPP)], the estimation of cultivable organisms (enumeration of fast growing heterotrophic bacteria, actinomycetes and fungi) and the assessment of bacterial diversity using a culture-independent method (PCR-DGGE fingerprinting). The linkage of the parameters measured was analysed by canonical correspondence analysis (CCA).CCA ordination plots of the CLPP showed a similar pattern of microbial functional activity in both agronomic management systems, except in June. Enzymatic activity, water content and fungi counts were the main factors affecting the observed CLPP time variation. Such a variation was not expressed by the Shannon and evenness indices, which did not evidence significant differences in the bacterial and functional diversity between or within farming type over the analysed period. The cluster and CCA analyses of the DGGE profiles allowed the distinction of the bacterial communities of both paddies, with temporal variations being observed in the organically managed field but not in the conventional paddy. Enzymatic activity, pH and molinate content were the factors which most contributed to the observed variations. Altogether these results underline the functional redundancy of the rice paddy soil and evidence the temporal variations on the metabolic activity of soil, irrespective of farming type.     

Precipitation modifies the effects of warming and nitrogen addition on soil microbial communities in northern Chinese grasslands

Terrestrial ecosystems experience simultaneous shifts in multiple drivers of global change, which can interactively affect various resources. The concept that different resources co-limit plant productivity has been well studied. However, co-limitation of soil microbial communities by multiple resources has not been as thoroughly investigated. Specifically, it is not clearly understood how microbial communities respond to shifts in multiple interacting resources such as water, temperature, and nitrogen (N), in the context of global change. To test the effects of these various resources on soil microorganisms, we established a field experiment with temperature and N manipulation in three grasslands of northern China, where there is a decrease in precipitation from east to west across the region. We found that microbial responses to temperature depended upon seasonal water regimes in these temperate steppes. When there was sufficient water present, warming had positive effects on soil microorganisms, suggesting an interaction between water and increases in temperature enhanced local microbial communities. When drought or alternating wet–dry stress occurred, warming had detrimental effects on soil microbial communities. Our results also provide clear evidence for serial co-limitation of microorganisms by water and N at the functional group and community levels, where water is a primary limiting factor and N addition positively affects soil microorganisms only when water is sufficient. We predict that future microbial responses to changes in temperature and N availability could be seasonal or exist only in non-drought years, and will strongly rely on future precipitation regimes.     

长期施肥对土壤微生物生物量碳、氮及矿质态氮含量动态变化的影响

利用位于陕西杨凌的17年长期定位试验研究了长期不施肥(CK)、单施化肥(F)、化肥配施有机肥(F+M)和化肥加秸秆还田(F+S)处理对小麦-玉米轮作体系中作物不同生长时期土壤微生物生物量碳、氮(SMBC、SMBN)和矿质态氮含量的影响。结果表明,0—10 cm土层土壤SMBC、SMBN和矿质态氮含量的变化范围分别为264.8~752.2、37.51~14.8和3.83~8.5 mg/kg。不同处理相比,F+M处理中各采样时期(小麦苗期、拔节期、灌浆期及玉米播种期、大喇叭口期、灌浆期和收获后)土壤SMBC和SMBN含量均为最高,分别为不施肥对照的1.382~.65和1.892~.50倍;F+S处理矿质态氮含量最高,SMBC和SMBN也高于F和CK处理,大部分采样时期的差异达显著水平(P0.05);与CK相比,长期单施化肥也使各时期SMBC和SMBN含量提高。在小麦拔节期到灌浆期的旺盛生长阶段各施肥处理土壤SMBN含量均下降,而矿质态氮含量变化不大,处于较低水平;在玉米大喇叭口期到灌浆期的旺盛生长阶段,F+M、F+S和F处理土壤矿质态氮含量显著下降,而SMBN含量均有所升高。表明在土壤矿质态氮含量较高时,作物首先利用矿质态氮,而在土壤矿质态氮含量处于较低水平时,微生物固持的氮素可能会释放出来供作物吸收利用。     

Responses of soil phosphorus pools accompanied with carbon composition and microorganism changes to phosphorus-input reduction in paddy soils

In rice-wheat rotation systems, changes in soil phosphorus(P) pools and microorganisms in rice-growing seasons have been studied;however, further investigations are required to test whether these indexes exhibit different responses in wheat-growing seasons. Additionally, such studies need to include potential variations in soil carbon(C) structure and microbial community composition. In this study, a long-term rice-wheat rotation P-input reduction experiment was conducted to observe the variations in soil P pools and C composition in the 7th wheat season and to investigate the responses of soil enzyme activity and microbial communities. Four P fertilization treatments were included in the experiment, i.e., P application for rice season only(PR), for wheat season only(PW), and for both rice and wheat seasons(PR+W) and no P application in either season(Pzero). Compared with PR+W treatment, Pzero treatment significantly decreased(P < 0.05) labile and stable P pools. Different P fertilization regimes altered soil microbial community composition and enzyme activity, whereas C composition did not vary. However, PW treatment resulted in relatively more O-alkyl-C than PR treatment and the highest number of microorganisms. Besides, the higher ratios of fungi/bacteria and Gram-positive bactetia/Gram-negative bactetia were related to labile C pools, particularly O-alkyl-C, as opposed to recalcitrant C. Our results clarified the status of soil P pools, C chemistry, and the response of microorganisms under dry-farming conditions in the P input-reduced rice-wheat rotation system.     

Responses of enzymatic activities within soil aggregates to 9-year nitrogen and water addition in a semi-arid grassland

Soil microorganisms secrete enzymes used to metabolize carbon (C), nitrogen (N), and phosphorus (P) from the organic materials typically found in soil. Because of the connection with the active microbial biomass, soil enzyme activities can be used to investigate microbial nutrient cycling including the microbial response to environmental changes, transformation rates and to address the location of the most active biomass. In a 9-year field study on global change scenarios related to increasing N inputs (ambient to 15 g N m⁻² yr⁻¹) and precipitation (ambient to 180 mm yr⁻¹), we tested the activities of soil β-glucosidase (BG), N-acetyl-glucosaminidase (NAG) and acid phosphomonoesterase (PME) for three soil aggregate classes: large macroaggregates (>2000 μm), small macroaggregates (250–2000 μm) and microaggregates (<250 μm). Results showed higher BG and PME activities in micro-vs. small macroaggregates whereas the highest NAG activity was found in the large macroaggregates. This distribution of enzyme activity suggests a higher contribution of fast-growing microorganisms in the micro-compared with the macroaggregates size fractions. The responses of BG and PME were different from NAG activity under N addition, as BG and PME decreased as much as 47.1% and 36.3%, respectively, while the NAG increased by as much as 80.8%, which could imply better adaption of fungi than bacteria to lower soil pH conditions developed under increased N. Significant increases in BG and PME activities by as much as 103.4 and 75.4%, respectively, were found under water addition. Lower ratio of BG:NAG and higher NAG:PME underlined enhanced microbial N limitation relative to both C and P, suggesting the repression of microbial activity and the accompanied decline in their ability to compete for N with plants and/or the accelerated proliferation of soil fungi under elevated N inputs. We conclude that changes in microbial activities under increased N input and greater water availability in arid- and semi-arid grassland ecosystems where NPP is co-limited by N and water may result in substantial redistribution of microbial activity in different-sized soil particles. This shift will influence the stability of SOM in the soil aggregates and the nutrient limitation of soil biota.     

Responses of nitrogen transformation and microbial community composition to nitrogen enrichment patch

Fertilization produces many nutrient patches that have been confirmed to affect root growth. However, it is not clear how nutrient transformation and microbial community composition are affected in an inorganic nutrient patch. In this experiment, a nitrogen enrichment patch was formed by the diffusion of a urea fertilizer layer in a specially-designed container. Responses of nitrogen transformation and microbial community composition to the nitrogen enrichment patch were investigated at different incubation times. Results showed that nitrogen status and microbial community composition were slightly affected in the control patch (CK patch). In the nitrogen enrichment patch, however, soil pH was significantly increased in most soil layers close to the urea fertilizer layer; NO₂⁻-N was the predominant form of mineral N, and its transformation to NO₃⁻-N was delayed. Microbial community composition shifted significantly, especially before day 28 of incubation. Principal components analysis (PCA) of phospholipid fatty acids (PLFAs) patterns showed that the microbial community presented different sensitivity to high nitrogen concentration. Fungi (18:2ω6,9) showed the least sensitivity to high concentrations of NO₂⁻-N and NO₃⁻-N. Gram-positive bacteria showed the most sensitivity to NO₂⁻-N. Gram-negative bacteria (cy17:0, cy19:0, 18:1ω9, and 18:1ω7) and actinomycetes (10Me17:0 and 10Me18:0) presented similar responses to NO₂⁻-N and NO₃⁻-N. Results of this study indicate that changes in nitrogen transformation and microbial community composition are likely to occur in nitrogen enrichment patches, but the extent of those changes depend on the microbial species and the distance of soil layers from the urea layer.     

Appropriate nitrogen supply could improve soil microbial and chemical characteristics with Sophora davidii seedlings cultivated in water stress conditions

Abstract

A greenhouse experiment was conducted to investigate the changes of soil microbial activities and chemical properties under different water and nitrogen (N) supply conditions. A completely randomized design was subjected to three water regimes (80%, 40% and 20% water field capacity (FC)) and three N supply regimes (control, N0: 0 mg N kg^?1 soil; low N supply, Nl: 92 mg N kg^?1 soil; and high N supply, Nh: 184 mg N kg^?1 soil) by potting with 2-month-old Sophora davidii seedlings. Water stress decreased the content of soil organic carbon (C), available N and phosphorus (P), the ratio of C/N, the ratio of C/P, as well as activities of soil invertase, urease and alkaline phosphatase, but not reduced microbial biomass C, N and P contents. Soil microbial and chemical characteristics also exhibited strong responses to N supply, and these responses were inconsistent among N supply levels. The contents of soil organic C and available P showed stronger positive responses to Nl than to Nh, while the available N content increased with increasing N supply. Additionally, Nl rather than the other two N treatments led to increased microbial biomass N and invertase activity under 20% FC treatment, even though the invertase activity increased in Nh treatment under 40% FC and 80% FC treatments. Nl treatment also increased the C/P ratio and alkaline phosphatase activity. These results suggest that water and N co-limited nutrient mineralization and microbial activity, and that these characteristics responded positively to Nl. Therefore, appropriate or low N supply is recommended to increase soil quality restrained by water stress, thereby facilitating S. davidii seedling establishment under water deficit conditions.     

氮素补充对高寒草甸土壤团聚体有机碳、全氮分布的影响

土壤结构的稳定性对高寒草甸生态系统有重要意义。为研究不同水平氮素补充对高寒草甸草地土壤团聚体、有机碳和全氮含量及分布格局的影响,于2012-2014年在青藏高原东部夏河县进行3 a的试验研究。试验为随机区组设计,包括0(对照)、50(低氮)、100(中氮)和200(高氮)kg/hm2 4个氮素补充水平。研究结果表明:低、中、高水平氮素补充处理显著提高了0~30 cm土层≥0.25 mm大团聚体质量分数(P0.05),比对照分别提高了4.74%、6.42%和1.96%;较之对照,低、中水平氮素补充处理显著增加了≥5 mm、≥2~5 mm粒级团聚体含量;低、中水平氮素补充处理显著提升了0~30 cm土壤团聚体平均质量直径,分别比对照提升了9.79%和12.63%。不同水平氮素补充处理有机碳、全氮含量大小排序分别为:中氮≈低氮对照高氮、中氮低氮≈高氮对照。不同粒级团聚体中0.25 mm微团聚体有机碳含量最高而全氮含量最低、≥0.25~2 mm粒级有机碳含量最低而全氮含量最高;低、中水平氮素补充提高了不同粒级团聚体0~30 cm土层有机碳含量而高水平氮素补充处理显著降低了有机碳含量;低、中、高水平氮素补充增加了不同粒级团聚体全氮含量,其中中水平氮素补充处理最高,低水平氮补充次之。不同粒级团聚体含量是影响团聚体养分贡献率的主要原因,≥2~5 mm粒级团聚体含量与相应粒级团聚体有机碳含量呈显著正相关关系,≥5 mm和≥2~5 mm粒级团聚体含量与相应粒级团聚体全氮含量分别呈极显著正相关、显著正相关关系。研究表明连续每年补充50~100 kg/hm2氮可以改善高寒草甸土壤结构并提高土壤肥力状况。     

添加调节N和P浓度后的植物残体对土壤呼吸作用、微生物量和养分有效性的影响

Microbial activity and nutrient release are known to be influenced by organic matter properties,but it is difficult to separate the effect of C/N ratio from that of C/P ratio because in most plant residues both ratios are either high or low.An incubation experimeut was conducted to investigate the effects of reducing the C/N and C/P ratios of slowly decomposable plant residues (young eucalyptus leaves,mature wheat straw,and sawdust) to those of rapidly decomposable residues (young kikuyu shoots) on soil respiration,microbial biomass,and N and P availability.The C/N and C/P ratios of the former were adjusted to 15 and 89,respectively,by adding N as (NH4)2SO4,P as KH2PO4 or both and residues were added at 10 g C kg-1 to a silt loam.Soil respiration was measured over 21 d;microbial biomass C (MBC) and available N and P were measured on days 0,7,and 21.Compared to the unamended soil,addition of kikuyu increased cumulative respiration 20-fold,MBC concentration 4 to 8-fold,and available P concentration up to 4-fold,whereas the increase in available N concentration was small and transient.Cumulative respiration and MBC concentration were low in the sawdust-amended soil and were not influenced by reducing the C/N and C/P ratios.Cumulative respiration with original wheat and eucalyptus was 30％-40％ of that with kikuyu.Reducing the C/N ratio alone or both C/N and C/P ratios increased cumulative respiration and MBC concentration 2-fold compared to the original wheat and eucalyptus,whereas reducing the C/P ratio had little effect.Throughout the experiment,the available N concentration after addition of residues with reduced C/N ratio increased in the following order of eucalyptus ＜ wheat ＜ sawdust.By independently lowering the C/N and C/P ratios,microbial activity was more limited by C and N than P.However,lowering the C/N ratio of very slowly decomposable sawdust had no effect on soil respiration and MBC concentration,suggesting that other properties such as concentration of poorly decomposable C compounds limited decomposition.     

Seasonal and long-term resource-related variations in soil microbial communities in wheat-based rotations of the Canadian prairie

Like all other living organisms, microorganisms depend on nutrients, carbon and energy. Since microorganisms are central to most soil processes, the sustainable management of agricultural soils may need to consider the impact of soil fertility management on the soil microbial community. We tested the hypothesis that different rates of N and P fertilizers, and cropping frequency (modifying C input to soil) influence the size, structure and physiological condition of soil microbial populations residing in the plough layer (top 7.5 cm). For this study, we used a 37-yr old long-term wheat-based rotation experiment located in the semiarid Brown soil zone of Saskatchewan. The experiment included (1) four input treatments: (i) no N or (ii) no P fertilizer application to wheat (Triticum aestivum L.) grown in fallow-wheat-wheat (F-W-W) rotations, and (iii) recommended rates of both N and P fertilizer applied to fallow-wheat (F-W) and (iv) to F-W-W; (2) two rotation phases: fallow and wheat-after-fallow; and (3) four sampling times: 8 June, 4 July, 5 August and 16 September 2003. Increased partitioning into storage lipids of the arbuscular mycorrhizal fungi (AMF) fatty acid methyl ester (FAME) biomarker 16:1ω5 (P=0.04), suggested the accumulation of storage material under low soil N availability. Discriminant analysis detected modifications in soil microbial community structure due to cropping frequency (P=0.001) and sampling time, the effect of which was different in the fallow (P<0.0001) and wheat-after-fallow (P<0.0001) phases of the rotations. Correlation analysis of soil variables conducted in plots growing wheat revealed a dual effect of plants, which stimulated active soil microbial biomass (SMB), possibly through the release of soluble extractable C (C_sol−ext) in soil and, at the same time, SMB competed with wheat for soil water and N. The 37 y of different nutrient input treatments had no effect upon the active soil microbial biomass according to PLFA measurements, despite changes in soil resource-related variables (soil water potential, soil PO₄-P and NO₃-N fluxes, and C_sol−ext concentrations) (P?0.003). The biomass of each of three microbial populations monitored was lowest on 4 July, when the amounts of the soil resources monitored were average, and greatest on 5 August, when N, P and soil moisture availability was lowest. The temporal effect on the biomass of microbial populations seemed unrelated to variation in nutrient or water availability. We conclude that the soil microbial community is adaptable to a wide range of soil conditions. We propose therefore that the occurrence of sudden and dramatic events, such as a heavy rainfall on a dry soil, is the most important determinant of seasonal variation in active soil microbial biomass.     

Contrasting soil microbial responses to fertilizers and herbicides in a canola-barley rotation

The combination of high input costs and low commodity prices is forcing some farmers to consider reducing crop inputs like seed, fertilizer and herbicides. In a field trial in which different canola (Brassica napus L.) and barley (Hordeum vulgare L.) inputs were subtracted from a full package, or added to an empty package, we studied the effects of full or reduced fertilizer and herbicide inputs on soil microbiological characteristics at two sites from 2005 to 2008. The full package consisted of a high-yielding crop variety seeded at an optimum rate, with fertilizers and herbicides applied at recommended rates. The empty package consisted of a less expensive, low-yielding crop variety seeded at a low rate, with no fertilizer or herbicide applied. Between these two extremes were treatments in which fertilizers or herbicides were applied at 50% of recommended rates or not at all. Each treatment was repeated year after year in the same plot, i.e., treatment effects were cumulative. Fertilizer effects on soil microbial biomass C (MBC), β-glucosidase enzyme activity and bacterial functional diversity (based on community-level physiological profiles) were usually positive. Reduced fertilizer application rates reduced the beneficial fertilizer effects. Significant herbicide effects on soil microbiological properties occurred less often, were smaller in magnitude than fertilizer effects, and were mostly negative. Reduced herbicide rates reduced the deleterious herbicide effects. These significant fertilizer and herbicide effects were observed in canola more than barley, and mostly in the final year of the study, indicating the cumulative nature of treatment effects over time. Therefore, repeated applications of agricultural inputs like fertilizers and herbicides can have more significant effects on soil biology and biological processes than single applications indicate.