温度和秸秆质量调节与秸秆分解相关的微生物磷脂脂肪酸（PLFA）组成

Variations in temperature and moisture play an important role in soil organic matter (SOM) decomposition. However, relationships between changes in microbial community composition induced by increasing temperature and SOM decomposition are still unclear. The present study was conducted to investigate the effects of temperature and moisture levels on soil respiration and microbial communities involved in straw decomposition and elucidate the impact of microbial communities on straw mass loss. A 120-d litterbag experiment was conducted using wheat and maize straw at three levels of soil moisture (40%, 70%, and 90% of water-holding capacity) and temperature (15, 25, and 35°C). The microbial communities were then assessed by phospholipid fatty acid (PLFA) analysis. With the exception of fungal PLFAs in maize straw at day 120, the PLFAs indicative of Gram-negative bacteria and fungi decreased with increasing temperatures. Temperature and straw C/N ratio significantly affected the microbial PLFA composition at the early stage, while soil microbial biomass carbon (C) had a stronger effect than straw C/N ratio at the later stage. Soil moisture levels exhibited no significant effect on microbial PLFA composition. Total PLFAs significantly influenced straw mass loss at the early stage of decomposition, but not at the later stage. In addition, the ratio of Gram-negative and Gram-positive bacterial PLFAs was negatively correlated with the straw mass loss. These results indicated that shifts in microbial PLFA composition induced by temperature, straw quality, and microbial C sources could lead to changes in straw decomposition.     

Microbial community composition and rhizodeposit-carbon assimilation in differently managed temperate grassland soils

Rhizodeposit-carbon provides a major energy source for microbial growth in the rhizosphere of grassland soils. However, little is known about the microbial communities that mediate the rhizosphere carbon dynamics, especially how their activity is influenced by changes in soil management. We combined a ¹³CO₂ pulse-labeling experiment with phospholipid fatty acid (PLFA) analysis in differently managed Belgian grasslands to identify the active rhizodeposit-C assimilating microbial communities in these grasslands and to evaluate their response to management practices. Experimental treatments consisted of three mineral N fertilization levels (0, 225 and 450 kg N ha⁻¹ y⁻¹) and two mowing frequencies (3 and 5 times y⁻¹). Phospholipid fatty acids were extracted from surface (0-5 cm) bulk (BU) and root-adhering (RA) soil samples prior to and 24 h after pulse-labeling and were analyzed by gas chromatography-combustion-isotope ratio mass spectrometry (GC-c-IRMS). Soil habitats significantly differed in microbial community structure (as revealed by multivariate analysis of mol% biomarker PLFAs) as well as in gram-positive bacterial rhizodeposit-C uptake (as revealed by greater ¹³C-PLFA enrichment following pulse-labeling in RA compared to BU soil in the 450N/5M treatment). Mowing frequency did not significantly alter the relative abundance (mol%) or activity (¹³C enrichment) of microbial communities. In the non-fertilized treatment, the greatest ¹³C enrichment was seen in all fungal biomarker PLFAs (C16:1ω5, C18:1ω9, C18:2ω6,9 and C18:3ω3,6,9), which demonstrates a prominent contribution of fungi in the processing of new photosynthate-C in non-fertilized grassland soils. In all treatments, the lowest ¹³C enrichment was found in gram-positive bacterial and actinomycetes biomarker PLFAs. Fungal biomarker PLFAs had significantly lower ¹³C enrichment in the fertilized compared to non-fertilized treatments in BU soil (C16:1ω5, C18:1ω9) as well as RA soil (all fungal biomarkers). While these observations clearly indicated a negative effect of N fertilization on fungal assimilation of plant-derived C, the effect of N fertilization on fungal abundance could only be detected for the arbuscular mycorrhizal fungal (AMF) PLFA (C16:1ω5). On the other hand, increases in the relative abundance of gram-positive bacterial PLFAs with N fertilization were found without concomitant increases in ¹³C enrichment following pulse-labeling. We conclude that in situ¹³C pulse-labeling of PLFAs is an effective tool to detect functional changes of those microbial communities that are dominantly involved in the immediate processing of new rhizosphere-C.     

Changes in the soil microbial community structure with latitude in eastern China, based on phospholipid fatty acid analysis

Phospholipid fatty acid (PLFA) profiles were measured in soils from 14 sites in eastern China representing typical geographic zones of varying latitude from north (47.4°N) to south (21.4°N). Amounts of soil microbial biomass, measured as total amounts of PLFAs, showed no regular trend with latitude, but were positively correlated with soil organic carbon content, the concentration of humic acid and amorphous iron oxide. Soil microbial community structure showed some biogeographical distribution trends and was separated into three groups in a cluster analysis and principal coordinate analysis of log transformed PLFA concentrations (mol%). Soils in the first group came from northern China with medium mean annual temperature (1.2–15.7 °C) and rainfall (550–1021 mm). Soils in the second group originated from southern China with a relatively higher mean annual temperature (15.7–21.2 °C) and rainfall (1021–1690 mm). Soils clustered in the third group originated from the most southerly region. The northern soils contained relatively more bacteria and Gram-negative PLFAs, while the southern soils had more fungi and pressure indexed PLFAs. These differences in soil microbial community structure were largely explained by soil pH, while other site and soil characteristics were less important.     

中国北方温带草原土壤微生物对气温变暖与添加氮素的响应特征

The responses of soil microbes to global warming and nitrogen enrichment can profoundly affect terrestrial ecosystem functions and the ecosystem feedbacks to climate change. However, the interactive effect of warming and nitrogen enrichment on soil microbial community is unclear. In this study, individual and interactive effects of experimental warming and nitrogen addition on the soil microbial community were investigated in a long-term field experiment in a temperate steppe of northern China. The field experiment started in 2006 and soils were sampled in 2010 and analyzed for phospholipid fatty acids to characterize the soil microbial communities. Some soil chemical properties were also determined. Five-year experimental warming significantly increased soil total microbial biomass and the proportion of Gram-negative bacteria in the soils. Long-term nitrogen addition decreased soil microbial biomass at the 0-10 cm soil depth and the relative abundance of arbuscular mycorrhizal fungi in the soils. Little interactive effect on soil microbes was detected when experimental warming and nitrogen addition were combined. Soil microbial biomass positively correlated with soil total C and N, but basically did not relate to the soil C/N ratio and pH. Our results suggest that future global warming or nitrogen enrichment may significantly change the soil microbial communities in the temperate steppes in northern China.     

土壤微生物群落结构与多样性对农田集约化管理程度降低的响应

Using a scheme of agricultural fields with progressively less intensive management （deintensification）, different management practices in six agroecosystems located near Goldsboro, NC, USA were tested in a large-scale experiment, including two cash-grain cropping systems employing either tillage （CT） or no-tillage （NT）, an organic farming system （OR）, an integrated cropping system with animals （IN）, a successional field （SU）, and a plantation woodlot （WO）. Microbial phospholipid fatty acid （PLFA） profiles and substrate utilization patterns （BIOLOG ECO plates） were measured to examine the effects of deintensification on the structure and diversity of soil microbial communities. Principle component analyses of PLFA and BIOLOG data showed that the microbial community structure diverged among the soils of the six systems.Lower microbial diversity was found in lowly managed ecosystem than that in intensive and moderately managed agroecosystems, and both fungal contribution to the total identified PLFAs and the ratio of microbial biomass C/N increased along with agricultural deintensification. Significantly higher ratios of C/N （P 〈 0.05） were found in the WO and SU systems, and for fungal/bacterial PLFAs in the WO system （P 〈 0.05）. There were also significant decreases （P 〈 0.05） along with agricultural deintensification for contributions of total bacterial and gram positive （G＋） bacterial PLFAs.Agricultural deintensification could facilitate the development of microbial communities that favor soil fungi over bacteria.     

Short-term biochar effect on soil physicochemical and microbiological properties of a degraded alpine grassland

Soil remediation is an important part of the restoration process of degraded terrestrial ecosystems. Due to its unique properties, biochar is being used widely as an effective soil modifier in agricultural systems, but research is still rare on biochar application in grassland ecosystems, especially in degraded alpine grasslands. In this study, we conducted a plot experiment to investigate the effect of biochar application on soil physicochemical properties and microorganisms at the 0–20 cm soil depth of a degraded alpine grassland in Qinghai-Tibet Plateau, China. The experiment consisted of four corn straw biochar application levels (0%, 0.5%, 1% and 2%, with the percentage representing the ratio of biochar weight to the dry weight of soil in the surface 20 cm soil layer). When the biochar addition increased from 0% to 2%, total nitrogen, total organic carbon and available phosphorus in the 0–10 cm soil layer increased by 41%, 55% and 45%, respectively, in the second year after biochar addition. Meanwhile, soil electrical conductivity decreased, and soil water content increased. Total microbial, fungal and bacterial biomasses in the 0–10 cm soil layer increased from 9.15 to 12.68, 0.91 to 1.34, and 3.85 to 4.55 μg g^-1, respectively. The relative biomasses of saprophytic fungi and methanotrophic bacteria decreased, while the relative biomasses of ectomycorrhizal fungi and arbuscular mycorrhizal fungi increased. These results indicate that biochar has a great potential in improving microbial activity and soil fertility in soil remediation of the degraded alpine grassland.     

造林恢复植被后土壤的化学计量学特征对其碳组分的影响

Afforestation is recognized as an important driving force for soil organic C(SOC) dynamics and soil element cycling.To evaluate the relationships between soil C:N:P stoichiometry and SOC fractions,soil C:N:P stoichiometry distributions at 0–200 cm soil depths were analyzed and the contents of SOC fractions were evaluated in 9 typical land-use systems on the Loess Plateau of China.The contents of light fraction organic C,particulate organic C(53,53–2 000,and2 000 μm),labile organic C,microbial biomass C,and dissolved organic C decreased with increasing soil depth and were higher in afforested soil than in slope cropland soil.Compared with the slope cropland,different vegetation types influenced soil C:N,C:P,and N:P ratios,especially when C:P and N:P ratios were significantly higher(P0.05).Moreover,SOC fractions at the 0–10 and 10–40 cm depths were particularly affected by soil C:P ratio,whereas those at the 40–100 and 100–200 cm soil depths were significantly affected(P0.05) by soil N:P ratio.These results indicate that changes in SOC fractions are largely driven by soil C:P and N:P ratios at different soil depths after afforestation.     

Identification of Metabolically Active Rhizosphere Microorganisms by Stable Isotopic Probing of PLFA in Switchgrass

Root-derived rhizodeposits of recent photosynthetic carbon (C) are the foremost source of energy for microbial growth and development in rhizosphere soil. A substantial amount of photosynthesized C by the plants is translocated to belowground and is released as root exudates that influence the structure and function of soil microbial communities with potential inference in nutrient and C cycling in the ecosystem. We applied the ¹³C pulse chase labeling technique to evaluate the incorporation of rhizodeposit-C into the phospholipid fatty acids (PLFAs) in the bulk and rhizosphere soils of switchgrass (Panicum virgatum L.). Soil samples of bulk and rhizosphere were taken at 1, 5, 10 and 20 days after labeling and analyzed for ¹³C enrichment in the microbial PLFAs. Temporal differences of ¹³C enrichment in PLFAs were more prominent than spatial differences. Among the microbial PLFA biomarkers, fungi and Gram-negative (GM-ve) bacterial PLFAs showed rapid enrichment with ¹³C compared to Gram-positive (GM+ve) and actinomycetes in rhizosphere soil. The ¹³C enrichment of actinomycetes biomarker PLFA significantly increased along with sampling time in both soils. PLFAs indicative to fungi, GM-ve and GM+ve showed a significant decrease in ¹³C enrichment over sampling time in the rhizosphere, but a decrease was also observed in GM-ve (16:1ω5c) and fungal biomarker PLFAs in the bulk soil. The relative ¹³C concentration in fungal PLFA decreased on day 10, whereas those of GM-ve increased on day 5 and GM+ve remained constant in the rhizosphere soil. However, the relative ¹³C concentrations of GM-ve and GM+ve increased on days 5 and 10, respectively, and those of fungal remain constant in the bulk soil. The present study demonstrates the usefulness of ¹³C pulse chase labeling together with PLFA analysis to evaluate the active involvement of microbial community groups for utilizing rhizodeposit-C.     

Change in soil microbial biomass and regulating factors in an alpine meadow site on the Qinghai-Tibetan Plateau

ABSTRACT

The change in soil microbial biomass (SMB) content and its direct links to soil organic matter (SOM) and environmental factors are not well understood for high-elevation regions. Therefore, this research investigated the temporal variation of SMB and its relationship with SOM and environmental factors in an alpine meadow site on the Qinghai-Tibetan Plateau. The soil organic carbon (SOC) and total nitrogen (TN) contents in alpine meadows showed monthly and seasonal variations and were higher in colder months, and the soil C/N ratio was higher in winter and in autumn than it was in the other seasons (P < 0.05). In addition, the changes in the SMB C and SMB N contents were notable at monthly and seasonal scales, whereas the SMB C and SMB N contents were higher in the winter and spring than they were in the other seasons (P < 0.05); the ratio of SMB C/SOC was higher in spring than it was in the other seasons; the ratio of the SMB N/TN content was higher in cold or cool months than it was in the other months; and the ratio of the SMB C/SMB N was highest in August (P < 0.05). Moreover, the SMB C and SMB N contents were significantly positively correlated to the SOC and TN contents (P < 0.01), and the SMB content was also significantly positively correlated to soil water content and air temperature (P < 0.05), or to soil bulk density and soil pH (P < 0.05). The results suggested that the change in the SMB in the alpine meadows was highly regulated by the SOC and TN and by monthly and seasonal changes in the soil bulk density, the soil pH, soil moisture, and air temperatures.     

PLFA方法研究连作对加工番茄根际土壤微生物群落结构的影响

通过在石河子大学农学院试验站开展加工番茄连作定点微区试验,采用氯仿熏蒸和磷脂脂肪酸(PLFA)法相结合,研究了不同连作处理(种植1 a、连作3 a、5 a和7 a)对新疆加工番茄花果期和成熟期根际土壤微生物群落结构及土壤微生物量的影响。结果表明,连作导致土壤微生物量碳(SMBC)、微生物量氮(SMBN)和微生物熵(q MB)下降,SMBC/SMBN升高,而微生物量磷(SMBP)随连作年限和生育期的变化而不同。连作显著增加了真菌PLFAs含量,降低了细菌PLFAs含量、土壤PLFAs总量及细菌/真菌PLFAs的比值,而放线菌PLFAs含量变化无规律。连作7 a时,成熟期的细菌PLFAs含量、土壤PLFAs总量较对照分别减少62.9%、50.3%(P0.05),而真菌PLFAs含量较对照升高60.2%(P0.05)。从多样性指数分析看,Shannon-Wiener指数、Simpson指数、Brillouin指数和Pielou指数均随连作年限的延长呈先升后降的变化,其中连作3 a时各项指数最大,连作7 a时最小,表明在本试验年限范围内,连作使得微生物群落多样性与均匀程度皆出现了一定程度的降低。相关性分析表明,土壤微生物各类群PLFAs量、微生物量及土壤肥力之间存在相关性,说明土壤微生物量与土壤肥沃程度相关,可作为评价土壤肥力的生物学指标。可见,加工番茄连作改变了土壤微生物群落结构,降低了土壤微生物量,最终在根际土壤微生态系统和环境因子等因素的综合作用下产生连作障碍。     

Exotic earthworms alter soil microbial community composition and function

Exotic earthworms can profoundly alter soil carbon (C) and nitrogen (N) dynamics in northern temperate forests, but the mechanisms explaining these responses are not well understood. We compared the soil microbial community (SMC) composition (measured as PLFAs) and enzyme activity between paired earthworm-invaded and earthworm-free plots in northern hardwood forests of New York, USA. We hypothesized that differences in SMCs and enzyme activity between plots would correspond with differences in soil C content and C:N ratios. Relative abundance of several bacterial (mostly gram-positive) PLFAs was higher and that of two fungal PLFAs was lower in earthworm compared to reference plots, largely because of earthworm incorporation of the organic horizon into mineral soil. In surface mineral soil earthworms increased arbuscular mycorrhizal fungi (AMF) and gram-positive bacterial PLFAs, and decreased fungal (mostly saprotrophic) and several bacterial (gram-negative and non-specific) PLFAs. Earthworms also increased the activities of cellulolytic relative to lignolytic enzymes in surface mineral soil, and the relationships between enzyme activities and components of the SMC suggest a substrate-mediated effect on the SMC and its metabolism of C. A highly significant relationship between components of the SMC and soil C:N also suggests that earthworms reduce soil C:N through functional and compositional shifts in the SMC. Finally, changes in AMF abundances were linked to phosphatase activity, suggesting that earthworms do not necessarily inhibit P-acquisition by AMF-associated plants in our study system. We conclude that the combined influence of earthworm-related changes in physical structure, accessibility and chemistry of organic matter, and relative abundance of certain groups of fungi and bacteria promote C metabolism, in particular by increasing the activities of cellulolytic vs. lignolytic enzymes.     

Responses of soil enzyme activity and microbial community compositions to nitrogen addition in bulk and microaggregate soil in the temperate steppe of Inner Mongolia

In order to explore the responses of soil enzyme activities and microbial community compositions to long-term nitrogen (N) addition in both bulk soil and microaggregate of chestnut soil, we conducted a 7-year urea addition experiment with N treatments at 6 levels (0, 56, 112, 224, 392 and 560 kg N ha^–1 yr^–1) in a temperate steppe of Inner Mongolia in China. Soil properties and the activities of four enzymes involved in carbon (C), nitrogen (N) and phosphorus (P) cycling were measured in both bulk soil and microaggregate, and phospholipid fatty acids (PLFAs) were measured in bulk soil. The results indicated that: 1) in bulk soil, N addition significantly decreased β-1,4-glucosidase (BG) and leucine aminopeptidase (LAP) activities at the treatment amounts of 224, 392 and 560 kg N ha^–1 yr^–1, and obviously suppressed β-1,4-N-acetylglucosaminidase (NAG) activity at the treatment amount of 560 kg N ha^–1 yr^–1. N addition enhanced total PLFAs (totPLFAs) and bacterial PLFAs (bacPLFAs) at the treatment amounts of 392 and 560 kg N ha^–1 yr^–1, respectively, but fungal PLFAs showed no response to N addition. The activities of BG, NAG and LAP were positively correlated with soil pH, but negatively correlated with the concentration of NH ₄⁺-N; 2) in microaggregate (53–250 μm), the activities of BG, NAG and AP showed no response to increased addition of N, but the significantly decreased LAP activity was observed at the treatment amount of 392 kg N ha^–1 yr^–1. These results suggested that enzyme activities were more sensitive to N addition than PLFA biomarkers in soil, and LAP activity in microaggregate may be a good indicator for evaluating N cycle response to long-term N addition.     

Succession of microbiota estimated by phospholipid fatty acid analysis and changes in organic constituents during the composting process of rice straw

The succession of responsible microbiota during the composting process of rice straw (RS) was studied for 145 d in relation to the changes in the organic constituents of RS. During the composting process, the C / N ratio of RS decreased from 56 to 22. On a C basis, the relative contents of lipid, water-soluble organic matter (WSOM), hemicellulose, cellulose, and lignin fractions in RS changed from 5.6, 8.9, 32.9, 17.9, and 34.0%, to 7.3, 5.8, 30.7, 3.8, and 51.1%, respectively, indicating that the cellulose fraction was mainly decomposed in the composting process. Biomass C accounted for 18.3% (on day 75 when the total amount of phospholipid fatty acids (PLFAs) reached a peak) and 11.5% (at the end of composting) of the total C of RS under the composting process. As for PLFAs, the biomarkers of fungi and Gram-negative bacteria predominated in the RS material used. At the thermophilic stage (the first 2 weeks), biomarkers of Gram-positive bacteria and actinomycetes predominated. After the thermophilic stage, biomarkers of other Gram-positive bacteria became dominant. Finally, at the curing stage, the proportion of the biomarkers of Gram-negative bacteria and eukaryotes increased, indicating the co-contribution of Gram-positive and Gram-negative bacteria and fungi in the decomposition process at this stage. The trans / cis ratio of 16 : 1ω7 PLFA of RS under the composting process ranged from 0.18 to 0.30, indicating that the composting process of RS prepared a significantly lower environmental stress (p < 0.01) compared to the decomposition of RS in a submerged paddy soil.     

Effects of simulated nitrogen deposition on soil respiration components and their temperature sensitivities in a semiarid grassland

Nitrogen (N) deposition to semiarid ecosystems is increasing globally, yet few studies have investigated the ecological consequences of N enrichment in these ecosystems. Furthermore, soil CO₂ flux – including plant root and microbial respiration – is a key feedback to ecosystem carbon (C) cycling that links ecosystem processes to climate, yet few studies have investigated the effects of N enrichment on belowground processes in water-limited ecosystems. In this study, we conducted two-level N addition experiments to investigate the effects of N enrichment on microbial and root respiration in a grassland ecosystem on the Loess Plateau in northwestern China. Two years of high N additions (9.2 g N m⁻² y⁻¹) significantly increased soil CO₂ flux, including both microbial and root respiration, particularly during the warm growing season. Low N additions (2.3 g N m⁻² y⁻¹) increased microbial respiration during the growing season only, but had no significant effects on root respiration. The annual temperature coefficients (Q₁₀) of soil respiration and microbial respiration ranged from 1.86 to 3.00 and 1.86 to 2.72 respectively, and there was a significant decrease in Q₁₀ between the control and the N treatments during the non-growing season but no difference was found during the growing season. Following nitrogen additions, elevated rates of root respiration were significantly and positively related to root N concentrations and biomass, while elevated rates of microbial respiration were related to soil microbial biomass C (SMBC). The microbial respiration tended to respond more sensitively to N addition, while the root respiration did not have similar response. The different mechanisms of N addition impacts on soil respiration and its components and their sensitivity to temperature identified in this study may facilitate the simulation and prediction of C cycling and storage in semiarid grasslands under future scenarios of global change.     

Specific response of fungal and bacterial residues to one-season tillage and repeated slurry application in a permanent grassland soil

The dynamics of fungal and bacterial residues to a one-season tillage event in combination with manure application in a grassland soil are unknown. The objectives of this study were (1) to assess the effects of one-season tillage event in two field trials on the stocks of microbial biomass, fungal biomass, microbial residues, soil organic C (SOC) and total N in comparison with permanent grassland; (2) to determine the effects of repeated manure application to restore negative tillage effects on soil microbial biomass and residues. One trial was started 2 years before sampling and the other 5 years before sampling. Mouldboard ploughing decreased the stocks of SOC, total N, microbial biomass C, and microbial residues (muramic acid and glucosamine), but increased those of the fungal biomarker ergosterol in both trials. Slurry application increased stocks of SOC and total N only in the short-term, whereas the stocks of microbial biomass C, ergosterol and microbial residues were generally increased in both trials, especially in combination with tillage. The ergosterol to microbial biomass C ratio was increased by tillage, and decreased by slurry application in both trials. The fungal C to bacterial C ratio was generally decreased by these two treatments. The metabolic quotient qCO₂ showed a significant negative linear relationship with the microbial biomass C to SOC ratio and a significant positive relationship with the soil C/N ratio. The ergosterol to microbial biomass C ratio revealed a significant positive linear relationship with the fungal C to bacterial C ratio, but a negative one with the SOC content. Our results suggest that slurry application in grassland soil may promote SOC storage without increasing the role of saprotrophic fungi in soil organic matter dynamics relative to that of bacteria.     

干旱热带地区土地利用变化对土壤微生物群落组成及有机碳含量的影响

Restoration of forests poses a major challenge globally,particularly in the tropics,as the forests in these regions are more vulnerable to land-use change.We studied land-use change from natural forest (NF) to degraded forest (DF),and subsequently to either Jatropha curcas plantation (JP) or agroecosystem (AG),in the dry tropics of Uttar Pradesh,India,with respect to its impacts on soil microbial community composition as indicated by phospholipid fatty acid (PLFA) biomarkers and soil organic carbon (SOC) content.The trend of bacterial PLFAs across all land-use types was in the order:NF ＞ JP ＞ DF＞ AG.In NF,there was dominance of gram-negative bacterial (G-) PLFAs over the corresponding gram-positive bacterial (G+) PLFAs.The levels of G-PLFAs in AG and JP differed significantly from those in DF,whereas those of G+ PLFAs were relatively similar in these three land-use types.Fungal PLFAs,however,followed a different trend:NF ＞ JP ＞ DF =AG.Total PLFAs,fungal/bacterial (F/B) PLFA ratio,and SOC content followed trends similar to that of bacterial PLFAs.Across all land-use types,there were strong positive relationships between SOC content and G-,bacterial,fungal,and total microbial PLFAs and F/B PLFA ratio.Compared with bacterial PLFAs,fungal PLFAs appeared to be more responsive to land-use change.The F/B PLFA ratio,fungal PLFAs,and bacterial PLFAs explained 91％,94％,and 73％ of the variability in SOC content,respectively.The higher F/B PLFA ratio in JP favored more soil C storage,leading to faster ecosystem recovery compared to either AG or DF.The F/B PLFA ratio could be used as an early indicator of ecosystem recovery in response to disturbance,particularly in relation to land-use change.     

外源铬对小白菜(Brassica chinensis L.)根际土壤微生物生物量和磷脂脂肪酸的剖面分布特征的影响

The effects of root activity on microbial response to cadmium （Cd） loading in the rhizosphere are not well understood. A pot experiment in greenhouse was conducted to investigate the effects of low Cd loading and root activity on microbial biomass and community structure in the rhizosphere of pakchoi （Brassica chinensis L.） on silty clay loam and silt loamy soil. Cd was added into soil as Cd（NO3）2 to reach concentrations ranging from 0.00 to 7.00 mg kg-1. The microbial biomass carbon （MBC） and community structure were affected by Cd concentration, root activity, and soil type. Lower Cd loading rates （〈 1.00 mg kg-1） stimulated the growth of pakchoi and microorganisms, but higher Cd concentrations inhibited the growth of microorganisms. The content of phospholipid fatty acids （PLFAs） was sensitive to increased Cd levels. MBC was linearly correlated with the total PLFAs. The content of general PLFAs in the fungi was positively correlated with the available Cd in the soil, whereas those in the bacteria and actinomycetes were negatively correlated with the available Cd in the soil. These results indicated that fungi were more resistant to Cd stress than bacteria or actinomycetes, and the latter was the most sensitive to Cd stress. Microbial biomass was more abundant in the rhizosphere than in the bulk soil. Root activity enhanced the growth of microorganisms and stabilized the microbial community structure in the rhizosphere. PLFA analysis was proven to be sensitive in detecting changes in the soil microbial community in response to Cd stress and root activity.     

Relative role of soil nutrients vs. carbon availability on soil carbon mineralization in grassland receiving long-term N addition

High nitrogen (N) input often induces soil carbon (C) limitation, eutrophication of macronutrients, deficiency of base cations, and accumulation of toxic micronutrients. These changes are perceived to be critical factors in regulating soil C mineralization. Previous studies primarily focused on the individual effects of C, macronutrients, exchangeable base cations, and micronutrients on soil C mineralization. However, the relative importance of those factors in regulating soil C mineralization, especially in N-enriched ecosystems, remains unclear. To disentangle the relative contributions of aforementioned factors, lime and/or glucose were added to soils that were collected from a field experiment with historical N addition (6 years) at seven rates (0–50 g N m⁻² year⁻¹) in a grassland ecosystem. Lime and glucose were added to improve the soil C and key nutrient conditions. The responses of soil C mineralization rate to changes in soil C and macronutrients (N and P), exchangeable base cations (K⁺, Na⁺ and Mg²⁺), and micronutrients (Fe²⁺, Mn²⁺, Cu²⁺ and Zn²⁺) were examined. We found that lime addition decreased soil micronutrients, while glucose addition improved the soil available P and exchangeable base cations, especially at high historical N addition rates. The soil C mineralization was weakly associated with changes in soil nutrients, including the availability of N, P, exchangeable base cations, and micronutrients, which were conventionally and previously considered as the vital drivers of soil C mineralization. However, soil C mineralization strongly increased with glucose-induced enhancement of C availability and the subsequent enhancement of microbial biomass under increasing N addition rates. Based on the Structural Equation Model, the standardized total effects of C, macronutrients (N and P), base cations and micronutrients on soil C mineralization were 0.86, − 0.29, 0.15 and − 0.08, respectively. Findings from this study demonstrated that the N-induced significant changes in soil nutrients (e.g., eutrophication of N and P, base cations deficiency and accumulation of toxic macronutrients) mediated soil C mineralization, with C availability being the most critical driver for C mineralization in N-enriched soil. This study provides insight into the mechanistic understanding of the relationship between N input and terrestrial C cycling.     

Carbon uptake by a microbial community during 30-day treatment with 13C-glucose of a sandy loam soil fertilized for 20 years with NPK or compost as determined by a GC–C–IRMS analysis of phospholipid fatty acids

To investigate the uptake by the microbial community of easily decomposable exogenous organic C and the proportion of this organic C remaining in soils under long-term fertilization schemes, ¹³C-glucose was supplied to arable soils (aquic inceptisol) following a 20-year (1989–2009) application of compost (CM) or inorganic NPK (NPK), along with a control (no fertilizer). Phospholipid fatty acids (PLFAs) were used as biomarkers for actinobacteria, bacteria and fungi. Gas chromatography–combustion–stable isotope ratio mass spectrometry (GC–C–IRMS) was used to determine the incorporation of ¹³C into individual PLFAs. The concentrations of soil microbial PLFAs significantly (P < 0.05) increased in all three soils after the addition of ¹³C-glucose. Over a 30-day incubation period, the highest PLFA concentrations were on day 7 (control) or day 15 (NPK and CM) for bacteria, and on day 30 for both fungi and actinobacteria. The added ¹³C-glucose was incorporated into bacterial PLFAs first, whilst an increase of ¹³C in fungal and actinobacterial PLFAs was measured on day 7 and 15, respectively. The mean amounts of ¹³C in bacterial, actinobacterial and fungal PLFAs in CM-treated soil during the 30-day incubation period were 0.589, 0.030 and 0.056 μg g⁻¹ soil, respectively, which were significantly (P < 0.05) higher than levels measured in the NPK and control soils. Among the bacterial groups, the amount of ¹³C in Gram-positive (G⁺) bacteria over the entire incubation ranged from 0.326 to 0.440 μg g⁻¹ soil in the CM scheme, which was significantly (P < 0.05) higher than levels detected in the NPK and control regimes. In contrast, ¹³C concentrations in monounsaturated PLFAs (aerobic microorganisms) in the CM-treated soil were 0.030–0.045 μg g⁻¹ soil, which was significantly (P < 0.05) lower than in the NPK schemes. The proportion of glucose-derived ¹³C remaining in soils was ranked as follows: CM (53%) > NPK (41%) > control (28%) after 30 days of incubation. Easily decomposable exogenous organic C was thus more effectively maintained under the CM regime, primarily because, after 20 years, CM had altered the microbial community by reducing the ratio of aerobic to anaerobic microorganisms whilst increasing levels of G⁺ bacteria in soil compared to the control and NPK soils. This study aids our understanding of the transformation and maintenance of easily decomposable organic C in soil over long-term fertilization regimes.     

Effects of flue gas desulfurization gypsum by-products on microbial biomass and community structure in alkaline–saline soils

Purpose

For an alkaline?Csaline region in Northwest China, we examined the responses of soil microbial communities to flue gas desulfurization gypsum by-products (FGDB), a new ameliorant for alkaline?Csaline soils. In 2009 and 2010, we collected soils from 0?C20?cm and 20?C40?cm depths along an experimental FGDB gradient (0, 0.74, 1.49, 2.25, and 3.00?kg FGDB m^?2).

Materials and methods

As a measure of microbial community composition and biomass, we analyzed phospholipid fatty acids (PLFAs). We used real-time quantitative polymerase chain reaction (qPCR) to measure abundance of bacterial 16?S rRNA copy numbers. Additionally, physicochemical soil parameters were measured by common laboratory methods.

Results and discussion

Microbial community composition differed along the FGDB gradient; however, the microbial parameters did not follow a linear response. We found that, in 2009, total PLFA concentrations, and concentrations of total bacterial and Gram-negative bacterial PLFAs were slightly higher at intermediate FGDB concentrations. In 2010, total PLFA concentrations, and concentrations of total bacterial, Gram-positive bacterial, Gram-negative bacterial, and fungal PLFAs as well as the fungal:bacterial PLFA ratio were highest at 1.49?kg FGDB m^?2 and 3.00?kg FGDB m^?2. PLFA concentrations often differed between 2009 and 2010; however, the patterns varied across the gradient and across microbial groups. For both years, PLFA concentrations were generally higher at 0?C20?cm depth than at 20?C40?cm depth. Similar results were obtained for the 16?S rRNA copy numbers of bacteria at 0?C20?cm depth. FGDB addition resulted in an increase in soil Ca²⁺ and NO ₃ ^? ?CN and a decrease in pH and electrical conductivity (EC). Shifts in PLFA-based microbial community composition and biomass could partly be explained by pH, soil organic carbon, total nitrogen (TN), soil moisture, EC, inorganic nitrogen, C/N, and Ca²⁺. Indirect effects via shifts in abiotic soil properties, therefore, seem to be an important pathway through which FGDB affect soil microbial communities.

Conclusions

Our results demonstrate that addition of FGDB leads to significant changes in soil physicochemical and microbial parameters. As such, addition of FGDB can have large impacts on the functioning of soil ecosystems, such as carbon and nitrogen cycling processes.