Isolation, identification and characterization of disomic and translocated barley chromosome addition lines of common wheat

Two disomic barley chromosome addition lines and five translocated chromosome addition lines of common wheat cultivar Shinchunaga were isolated. They were derived from a hybrid plant between Shinchunaga and cultivated barley Nyugoruden (New Golden) by backcrossing with wheat and self pollination. Barley chromosomes added to chromosome arms involved in the translocated chromosomes were identified by C-banding method and by crossing these lines with Chinese Spring/Betzes addition lines. Two disomic addition lines were identified to have chromosome 6 and 7 of barley, respectively. Two of the five translocated chromosome addition lines were clarified to have same chromosome constitution, 42 wheat chromosomes and a pair of translocated chromosomes constituted with a long arm of chromosome 5B of wheat and a short arm of chromosome 7 of barley. The other three lines could not be identified due to chromosome rearrangement. Performances of these seven lines on agronomic characters were examined. Addition of barley chromosome 7 induced early heading, and chromosome 6 showed lated heading. Almost all of the lines except that of chromosome 6 showed short culm length and all showed reduced number of tillers, spikelets and grains per ear, and low seed fertility. These lines would be useful for genetic analyses in wheat and barley and for induction of useful genes of barley into wheat. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic analysis of heading date and other agronomic characters in barley (Hordeum vulgare L.)

Genetic analyses of heading date, tiller number, plant height, grain yield, kernel weight, and plump and thin kernels were made in three six-rowed barley crosses (Hordeum vulgare L.) involving four cultivars. Six populations, P₁ , P₂ , F₁ , F₂ , BC₁ , and BC₂ , from each cross were grown and evaluated at Fargo and Prosper, North Dakota, 1982. Parental means within crosses generally were different except for tiller number. Comparison of generation means suggested that late heading was dominant to early, high kernel weight was dominant to low, and kernel plumpness was influenced by additive gene action. The relationship between yield and heading date was not consistent among crosses and positive r values were quite low. It should be possible to select early maturing, high yielding segregates with plump kernels. Heterosis over the mid-parent was quite similar among crosses for heading date, but there was no heterosis over the high parent. Inbreeding depression was fairly constant for heading date, but was less consistent for yield. The lack of uniformity for estimates of inbreeding depression can be related to environmental variation and to its influence on type of gene action. The ratio of additive to dominance variance was inconsistent among crosses for heading date and yield. These data suggest selection for these characters should be delayed past the F 2 generation. Broad sense heritabilities for heading date ranged from 42 to 86%. Values obtained for grain yield were more consistent among broad sense than narrow sense estimates. Genetic advance estimates were low due to lack of additive variance. This revised version was published online in July 2006 with corrections to the Cover Date.     

Isolation of a fertile wheat-barley addition line carrying the entire barley chromosome 1H

The isolation of six of the seven possible additions of barley chromosomes to the wheat genome reported 18 years ago has made an important contribution to gene mapping in barley, first with genes controlling isozymes and more recently DNA (molecular) markers. A fertile addition line involving barley chromosome 1H,which carries genes controlling several characters of economic importance, could not be isolated at that time because it caused extreme meiotic abnormalities leading to complete sterility when added to wheat. Later the short arm of barley chromosome 1H was added to wheat as a fertile ditelosomic addition, but the non-availability of the entire barley chromosome 1H addition line has hampered the location of barley genes to the long arm of this chromosome. This problem has now been overcome cytogenetically as described herein. The resultant self-fertile disomic-monotelodisomic addition line carrying a pair of barley chromosome 6H and a heteromorphic 1H/1HS pair is more stable, and makes the wheat-barley addition line series complete for gene mapping work and will provide a vehicle for the possible transfer of useful genes from this barley chromosome to wheat.     

Changes in the meiotic pairing behaviour of a winter wheat-winter barley hybrid maintained for a long term in tissue culture, and tracing the barley chromatin in the progeny using GISH and SSR markers

The aim of the present study was to produce backcross progenies in a new winter wheat (‘Asakaze komugi’) × winter barley (‘Manas’) hybrid produced in Martonvasar. As no backcross seeds were obtained from the initial hybrids, young inflorescences of the hybrids were used for in vitro multiplication in three consecutive cycles until a backcross progeny was developed. The chromosome constitution of the regenerated hybrids was analysed using genomic in situ hybridization (GISH) after each in vitro multiplication cycle. The seven barley chromosomes were present even after the third in vitro multiplication cycle but abnormalities were observed. Sixteen BC; plants containing, according to GfSH analysis, one to three complete barley chromosomes, two deletion barley chromosomes and a dicentric wheat‐barley translocation were grown to maturity from the single backcross progeny. The barley chromatin was identified using 20 chromosome‐specific barley SSR markers. All seven barley chromosomes were represented in the BC: plants. A deletion breakpoint at FL ±0,3 on the 5HL chromosome arm facilitated the physical localization of microsatellite markers.     

Development of RAPD markers in tritordeum and addition lines of Hordeum chilense in Triticum aestivum

RAPD markers were developed for octoploid X Tritordeum (amphiploid Hordeum chilense × Triticum aestivum) and its parents. Two bread wheats, two H. chilense accessions and the two tritordeums synthesized with them were used. A total of 41 arbitrary decamer primers were tested, yielding 190 products that could be assigned to wheat, 185 to H. chilense and 108 that were nonspecific (present in wheat and barley). A total of 44 products were specific to one H. chilense line and 33 to the other 16 of the former were located on the chromosomes using a set of H. chilense in T. aestivum addition lines. The potential of RAPDs for developing addition lines or the detection of introgressions of H. chilense in bread wheat is discussed.     

Inheritance of heading time in spring barley evaluated in multiple environments

The inheritance of heading time of spring barley was studied in three extremely early genotypes IB, RL and ‘Mona’ (M), which is homozygous recessive for the early maturity ea8 (=ea_k) gene conferring extreme earliness under short daylengths and is relatively photoperiod insensitive, and five (GP, MA, PS, NU and BA) spring genotypes that are early to intermediate for heading time. Frequency distributions of F₂ generations grown at Ouled Gnaou, Morocco (32°15′ N), an environment which maximizes differences between photoperiod‐insensitive and photoperiod‐sensitive genotypes, indicated that across populations many loci were segregating in a complex Mendelian manner. IB and RL were both homozygous recessive for the ea8 gene, which conferred an early heading time. RL had partially dominant alleles at second locus (Enea8), which enhanced its earliness. Recovery of only progeny within the parental range of genotypes for heading time from the crosses of RL/M and IB/M suggests that numerous loci remained suppressed, perhaps latent, given their diverse parentage. The ea8 recessive homozygote in RL suppressed another unidentified locus which, when homozygous recessive in the absence of the ea8 recessive homozygote, conferred extreme earliness in one short daylength environment (Ouled Gnaou, Morocco) but was undetected in another environment (Davis, CA, USA). Epistatic gene action and genotype × environment effects strongly influenced heading time. In addition to a genetic system consisting of single‐locus recessive homozygotes conferring photoperiod insensitivity, a second genetic system, based on dominant alleles at one or a few loci, derived from the early heading Finnish landrace ‘Olli’, also confers extremely early heading time under short daylengths and relative photoperiod insensitivity in the genotype GP.     

Detection of an earliness per se quantitative trait locus in the proximal region of wheat chromosome 5AL

A homoeologous quantitative trait locus to that of eps5L on barley chromosome 5H was identified in a syntenic region of wheat chromosome 5A. Wheat single chromosome recombinant lines (SCRs) were developed from a cross between ‘Chinese Spring’(‘Cappelle-Desprez’ 5A) and ‘Chinese Spring’(Triticum spelta 5A), these were grown together with the parental controls under different vernalization and photoperiod regimes. The variation for ear emergence time accelerated heading induced by the T. spelta segment indicated an effect associated with the Xcdo412-Xbcd9 interval. Since no differences between the SCRs and controls in responses to vernalization and photoperiod treatments were detected, this effect was identified as an earliness per se gene, Q Eetocs-5 A.2, which may be homoeologous to the eps5L quantitative trait locus of barley. Xbcd926 has been found to be closely linked to the rice flowering time quantitative trait loci, QHd9a or FLTQ2, on chromosome 9, suggesting possible relationships among the quantitative trait loci across wheat, barley and rice genomes.     

Identification of wheat–Thinopyrum intermedium 2Ai-2 ditelosomic addition and substitution lines with resistance to barley yellow dwarf virus

Among the regenerated plants derived from immature hybrid embryos of wheat–Thinopyrum intermedium disomic addition line Z6 × common wheat variety ‘Zhong8601’, a plant with a telocentric chromosome and barley yellow dwarf virus (BYDV) resistance was obtained. The telocentric chromosome paired with an entire Thinopyrum chromosome to form a heteromorphic bivalent at meiotic metaphase I. Genomic in situ hybridization showed that the telosome originated from Th. intermedium. Two ditelosomic additions and one disomic substitution were identified among the offspring of the plant. Two random amplified polymorphic DNA molecular markers were identified among 150 random primers used to detect the different arms of the alien chromosome. These might be useful for developing translocation lines with BYDV resistance.     

A QTL for early heading in wheat cultivar Suwon 92

Heading date is an important trait that determines wheat adaptation to environments. A recombinant inbred line (RIL) population derived from CI 13227 × Suwon 92 was employed to tag the quantitative trait locus (QTL) for early heading in Suwon 92. This population was phenotyped for heading date in 1994, 1995, and 1997, and analyzed with AFLP and SSR markers. Two AFLP markers (XGCTG.CGCT118 and XGCTG.CGCT60) closely associated with heading date were identified. Across years, XGCTG.CGCT118 and XGCTG.CGCT60 explained 40.4% and 32.2% of the total phenotypic variances, respectively. Interval analysis revealed a major QTL for heading date, designated QHd.pser-2DS, between AFLP marker XGCTG.CGCT118 and SSR marker Xgwm261. Based on the linkage map, QHd.pser-2DS was about 41.2 cM proximal to the distal end of chromosome 2DS, and explained 40.5% of the phenotypic variance across three years. The identified markers associated with the early heading QTL have the potential to be used in wheat breeding programs.     

Karnal Bunt Resistance in Wheat-Barley Addition Lines

Wheat-barley addition lines 7H, 2H, 3H, 4H, 6H and 5H having barley chromosomes 1, 2, 3, 4, 6 and 7, respectively, were evaluated for resistance to karnal bunt (Neovossia indica) using syringe inoculation of sporidial suspensions of N. indica under glasshouse conditions. Addition lines 4H and 7H were rated as highly resistant and resistant, respectively, with zero and 3.22 coefficients of infection compared to ‘Chinese Spring’ which had a 23.5 coefficient of infection. All the six addition lines were found to be susceptible to specific virulences of Puccinia recondita tritici and P. striiformis.     

硬粒小麦-长穗偃麦草附加系、代换系和易位系的创制

通过小麦与长穗偃麦草远缘杂交创制附加系、代换系及易位系是小麦遗传改良中利用长穗偃麦草优良基因的重要途径。本研究将长穗偃麦草特异分子标记、染色体计数、基因组原位杂交(GISH)及非变性原位杂交(ND-FISH)等多种方法相结合,对硬粒小麦Langdon (AABB)与小偃麦8801 (AABBEE)的杂交后代群体进行分子细胞学鉴定,创制出硬粒小麦-长穗偃麦草3E、6E染色体双体附加系Du-DA3E和Du-DA6E,硬粒小麦-长穗偃麦草1E (1B)染色体双体代换系Du-DS1E(1B)以及硬粒小麦-长穗偃麦草1AS-1EL染色体易位系Du-T1AS·1EL。创制的4个种质中长穗偃麦草染色体均能稳定遗传,这不仅增加了硬粒小麦-长穗偃麦草附加系和代换系的类型,还为后续利用长穂偃麦草优良基因改良小麦提供了特殊种质资源。     

Chromosome location of resistance to septoria leaf blotch and common bunt in wheat-barley addition lines

Septoria leaf blotch and common bunt are important diseases of wheat to which Hordeum vulgare is resistant. Addition lines of H. vulgare in wheat were utilized to determine which H. vulgare chromosomes carry resistance genes. Resistance to septoria leaf blotch was conferred by gene(s) present all over the barley genome, but more strongly by those located on chromosomes 7 and 4. Almost complete resistance to common bunt was conferred by gene(s) present in chromosomes 6 and a slight but significant level of resistance was conferred by chromosome 7. This revised version was published online in August 2006 with corrections to the Cover Date.     

Agronomic performance and molecular assessment of tissue culture-derived barley lines

In order to assess the genetic variability among regenerants. field trials were conducted with 64 barley lines derived from tissue culture (TCD lines) of four Bulgarian barley varieties. The results indicate that the agronomic performance was altered by tissue culture regeneration and the frequency of variation was cultivar dependent. Seven TCD lines showing desirable agronomic characters were selected in the SC1₆ progeny. Molecular markers (protein, restriction fragment length polymorphism (RFLP) and random amplified polymorphic DNA (RAPD) have used applied to determine the variability induced by tissue culture. Polymorphism was detected in sequences coding for C-hordeins in line 70 derived from cv.‘Jubiley’Two lines from cv.‘Ruen’exhibited polymorphic bands after hybridization with a mitochondrial DNA probe. RAPD assays have been carried out using 20 different l0-mer primers. Heritable polymorphisms in several TCD lines have been observed.     

Segregation distortion for agronomic traits in doubled haploid lines of barley

Four barley doubled haploid populations were produced by anther culture from the reciprocal crosses between two six‐row barley cultivars, ‘Plaisant’ and ‘Orria’; the doubled haploid lines (DHLs) derived from each cross were subsequently assigned to weak or vigorous populations according to the weak or vigorous nature of the originating embryos. Well‐formed embryos at day 25 on the induction medium were considered vigorous, whereas embryos maturing later were considered weak. The classification of vigorous and weak was closely associated with the ratio of green to albino plantlets regenerated. A random set of 25 DHLs from each of the four populations were selected for field testing in a replicated trial. Furthermore, a second set consisting of a total of 454 unreplicated DHLs from the four populations were also field assessed for grain yield. Distortion during in vitro culture may impede regeneration of a random array of microspores from a given cross, and may bias genetic estimates of specific trait/marker association in genetic studies. However, no significant differences were detected in this study among the four populations for days to heading, height, grain yield and thousand‐kernel‐weight when measured on the replicated trial of 100 DHLs, nor for grain yield in the second collection of 454 entries. This suggests that the likelihood of producing improved agronomic pure lines is independent of the direction of crossing and, more importantly, independent of the time when embryos matured in the induction media, at least for these particular six‐row cultivars and for the anther culture method used.     

Evaluation of susceptibility of auto- and alloplasmic barley DH lines to Fusarium seedling blight

Auto- and alloplasmic doubled haploid (DH) lines of barley were examined for susceptibility to Fusarium culmorum (W.G.Sm.) Sacc. (isolate KF350) seedling blight. Inoculated kernels were incubated at 20 °C in a chamber saturated to 100% RH a with 12/12 h dark/light cycle. Germination capacity, disease score on a 5-degree scale and root length were evaluated. The data were analysed statistically using three-factor analysis of variance. It was observed that the infection score of roots of DH lines with H. bulbosum cytoplasm was higher than that of their autoplasmic analogues. Length of infected seedling roots expressed as per cent of the control root length ranged from 81 to 56% in autoplasmic DH lines and from 60 to 48% in alloplasmic lines. These differences were statistically significant (at P = 0.01). It was evident, that H. bulbosum cytoplasm increase susceptibility of barley genotypes to Fusarium seedling blight.     

Production and characterization of Raphanus sativus-Brassica rapa monosomic chromosome addition lines

Breeding of Raphanus sativus‐Brassica rapa monosomic chromosome addition lines (MALs, 2n = 19) was carried out by backcrossing the synthesized amphidiploid line, Raphanobrassica (R. sativus×B. rapa, 2n = 38, RRAA, line RA89) with R. sativus cv. ‘Shogoin’ (2n = 18, RR). In the first cross of Raphanobrassica× radish, four sesquidiploidal BC₁ plants (2n = 28, RRA, RA89‐36‐1, RA89‐31‐1, RA89‐31‐2, RA89‐31‐3) were successfully developed. In these plants, the chromosome configurations of 9II + 10I and 10II + 8I were observed frequently at first metaphase (MI) of meiosis in pollen mother cells (PMCs). The RA 89‐36‐1 plant produced many seeds in the reciprocal backcrosses with radish. About 50% of the BC₂ plants obtained from the cross of RA89‐36‐1 plant × radish were 2n = 19 plants, followed by 2n = 18 plants (24%) and 2n = 20 plants (19%). In the reciprocal cross, 2n = 19 plants were also developed at the rate of 40%. From analysis of specific morphological traits, 2n = 19 plants were classified into eight types (a‐h). When 25 selected primers were used in polyacrylamide gel electrophoresis, random amplified polymorphic DNA (RAPD) markers derived from B. rapa for each type of MAL were detected in numbers between three for e‐type and 16 for b‐type. RAPD markers specific for each type alone were from one (OPE 05‐344) for h‐type to nine for b‐type. In the g‐type, no marker specific to this type alone was observed. However, 19 bands were common between at least two types. These MAL plants exhibited predominantly the chromosome configuration of 9II + 1I at MI of PMCs, pollen and seed fertility being the same level as the radish cv. ‘Shogoin’. From the morphological traits and DNA markers, eight different MAL types among 10 expected were identified.     

A polymorphic microsatellite in the 3'end of 'waxy' genes of wheat, Triticum aestivum

Potential polymorphism of an (AT)_N microsatellite at the 3’end of waxy genes in bread wheat was examined. Primers were designed from a published cDNA sequence of a wheat waxy gene. Polymerase chain reaction (PCR) amplification of genomic DNA from 135 mainly Australian cultivars revealed eight alleles on chromosome 7A. This polymorphic microsatellite is a potential codominant marker for the Wx-A1 locus in breeding programmes. A distinguishable fragment was also amplified from chromosome 7D. This fragment was absent where a plant was null for the waxy gene on chromosome 7D, being a dominant marker for the Wx-D1 locus. The primers were also useful for amplifying genomic DNA from barley, rye and triticale and can be used to detect potential polymorphism in these species.     

Effects of selection and opportunities for recombination in doubled-haploid populations of barley (Hordeum vulgare L.)

Doubled-haploid breeding systems are typically based on sampling gametes from F₁ plants. However, in the case of repulsion linkages, additional recombination could be advantageous. Pre-selection of gamete donors might also shift progeny performance in a desired direction. The objectives of this study were to quantify the effects of an additional round of recombination and assess the effectiveness of pre-anthesis selection in the production of barley doubled haploids. Assessments were conducted on: 1. 100 F₁-derived lines representing a subset of lines used in previous genome-mapping studies; 2. 100 random F₂-derived lines; and 3. 50 F₂-derived lines from gamete donors selected for early heading. An additional round of recombination had only a modest effect on generating more favourable genotypes. Pre-anthesis selection was ineffective in generating an earlier heading population. According to published quantitative-trait locus (QTL) analyses based on the F₁ -derived population, there are few repulsion linkages between QTL determining the traits measured in this experiment. Any advantages to be gained from postponing the generation of derivation of doubled haploids must be weighed against the delay and additional cost.     

Ability of chromosome 4H to compensate for 4D in response to drought stress in a newly developed and identified wheat–barley 4H(4D) disomic substitution line

A spontaneously developed wheat–barley 4H(4D) disomic substitution line was identified cytogenetically using genomic in situ hybridization (GISH), multicolour fluorescent in situ hybridization (FISH) and microsatellite markers. The ability of the barley 4H chromosome to compensate for wheat 4D in response to mild drought stress was also investigated. In the barley cv. 'Betzes' and the 4H(4D) substitution line, mild osmotic stress induced intensive stomatal closure, resulting in reduced water loss through transpiration and unchanged relative water content in the leaves. As the CO₂ assimilation rate remained relatively high, the water use efficiency, which is an important factor associated with drought tolerance, increased extensively under mild osmotic stress in these lines. In the case of the parental wheat genotypes, however, mild drought stress induced less intense stomatal closure and a greater decrease in the CO₂ assimilation rate than in barley or in the substitution line, resulting in unaugmented or reduced water use efficiency. The results demonstrate that genes localised on the 4H chromosome of barley were able to increase the water use efficiency of the wheat substitution line, which is suitable for improving wheat drought tolerance through intergeneric crossing.     

Control of ear emergence time by chromosome 3A of wheat

Chromosome 3A of wheat is known to carry earliness per se genes. To determine the number of genes and their arm location, ear emergence time under a controlled environment was nvestigated using ditelosomic lines and homozygous recombinant substitution lines developed between chromosome 3A homologues from (Timstein) and (Chinese Spring) (CS) in a CS genetic background. Because the ear emergence distribution was discontinuous and two separate modes were produced, the 86 recombinant lines could be divided into 21 lines as the early ‘Timstein’3A type and 65 lines as the late CS type. This agrees with the 1:3 independent segregation of two genes both located on chromosome 3A. Therefore, two hypotheses can be proposed, either CS(‘Timstein’ 3A) carries two genes and both are necessary to give early ear emergence, or one gene for early ear emergence is present on (Timstein) 3A, but a suppressor is on CS 3A. The behaviour of ditelosomic 3AL and 3AS lines, with an ear emergence time identical to that of CS, suggested that one gene is located on the long arm and the other is on the short arm.