Retarded leaching of nitrate measured in monolith lysimeters in south-east Nigeria

At Onne in South-east Nigeria, drainage water was collected from four monolith lysimeters and analysed for nitrate. The lysimeters contained an acid sandy loam. At the start of the first rainy season two lysimeters received urea labelled with ¹⁵NO₃^– and two received no nitrogen fertilizer; all four were uncropped in the first year.
The peak concentrations of ¹⁵NO₃^– and of unlabelled (soil) NO₃^– were found after 2.5 pore volumes of water had passed through the lysimeters. Using the same soil in the laboratory after fine sieving, the peak concentration of tritiated water was found at 1 pore volume whereas nitrate leaching was retarded. The pattern of nitrate leaching was well described by miscible and immiscible models which included an adsorption coefficient for nitrate. Over the 2 years 81.4% of the ¹⁵N added at the start of the first rainy season was recovered in the drainage water.     

Analysis of Potassium Uptake by Rice Roots Treated with Aluminum Using a Positron Emitting Nuclide, 38K

We investigate the effect of Al on K⁺ uptake by rice roots. Potassium-38 (³⁸K), a positron emitting nuclide (the half-life: 7.61 min), was used to trace K⁺ behavior. When a rice root was treated with 10μM Al for 24 h, the uptake of ³⁸K in the root was increased in the range of 1 to 2 cm from the root tip compared with that of the control sample. Because the root continued to grow without showing any damage of plasma membrane during the Al treatment, it was suggested that the ³⁸K uptake was not occurred through diffusion into the cells. The uptake of ³⁸K in both treatments, with/without Al, was decreased by VO₄^3- (inhibitor of H⁺-ATPase on plasma membrane) and DNP (H⁺ ionophore) treatment, which suggested that the K⁺ uptake was performed through an active transport, such as H⁺:K⁺ transport or H⁺ gradient promoted by an Al treatment.     

Fixation of radiocaesium traces in a weathering sequence mica → vermiculite → hydroxy interlayered vermiculite

Radiocaesium fixation in soils is reported to occur on frayed edge sites of micaceous minerals. The weathering of mica in acid soils may therefore influence the Cs⁺ fixation process and thereby the mobility of the radiopollutant. We produced a laboratory weathering model biotite → trioctahedral vermiculite → oxidized vermiculite → hydroxy interlayered vermiculite (HIV) and quantified the Cs⁺ fixation of each mineral both in a fixed K⁺–Ca²⁺ background and in acid conditions. The transformation process was achieved through K depletion by Na-tetraphenylboron, oxidation with Br₂ and Al-intercalation using NaOH and AlCl₃. In a constant K⁺–Ca²⁺ background, vermiculite fixed 92–95% of the initial ¹³⁷Cs⁺ contamination while biotite and HIV fixed only 18–33%. In acid conditions, the interlayer occupancy by either potassium (biotite) or hydroxy-Al groups (HIV) strongly limited Cs⁺ fixation to 1–4% of the initial ¹³⁷Cs⁺ contamination. Cs⁺ fixation occurred on vermiculitic sites associated with micaceous wedge zones. Though both oxidized and trioctahedral vermiculites fixed similar Cs⁺ amounts in a constant K⁺–Ca²⁺ background (92–95%), the oxidized vermiculite retained much more radiocaesium in acid conditions (78–84% against 54–59%), because of its dioctahedral character.     

Changes in the microbial community and physico-chemical characteristics of topsoils stockpiled during opencast mining

Abstract. Experiments on the effects of stockpiling soil on an opencast coal mine in Derbyshire showed that there were significant changes in the microbial community. Numbers of aerobic bacteria in stored soils ranged from 0.5 to 12.8 ± 10⁷ colony-forming-units (CFU)g^-1 with the smallest values being in the deepest parts of the oldest stores, whereas an adjacent undisturbed soil contained 6.6 ± 10⁷ CFU g^-1. There was a greater effect on the numbers of fungal spores, which ranged from 0.1 to 6.7 ± 10⁵ CFU g^-1 soil, all less than the 10 ± 10⁵ CFU g^-1 recorded for the undisturbed control soil. The number of fungal spores in the deepest part of the older soil stores was only 1/100 of the number in the undisturbed soil. This was mirrored by the biomass values, as determined by adenosine triphosphate (ATP) assay. Values of ATP ranged from 0.38 to 13.13 nmol g^-1 as compared to 5.8 nmol g^-1 in the undisturbed soil. All three of these microbiological properties decreased in value with both age and depth of storage. Neither anaerobic nor spore-forming bacterial numbers were greatly affected by storage.
The pH values tended toward neutrality in the deeper parts of the soil stores, and there was less organic matter in the older stores.     

Short-term kinetics of residual wheat straw C and N under field conditions: characterization by 13C15N tracing and soil particle size fractionation

Summary A clear understanding of the short-term decomposition and fate of crop residues is necessary to predict the availability of mineral N in soil. The fate of ¹³ C¹⁵N-labelled wheat straw in a silty soil (Typic Hapludalf) was studied using particle size fractionation and in situ incubation in which the equivalent of 8 t dry matter per ha of straw was incorporated into the soil over 574 days. Soil samples were separated into five particle-size fractions by wet sieving after disruption of aggregates. The weight, C and N contents, and ¹³C and ¹⁵N atom excess of each fraction were determined. Straw-derived C disappeared rapidly from the > 2000-μm fraction with an estimated half-life of 53 'normalized' days (equivalent of 10°C and −0−01 MPA water potential). Straw-derived C appeared to be only temporarily stored in the intermediate fractions (1000–2000 and 200–1000 pm). The maximum net ¹³C accumulation in the 50–200-μm fraction was 4·4% of added ¹³C. Straw-derived C accumulated most rapidly and preferentially in the 50-μm fraction, which stabilized after 265 days and accounted for 70% of the residual ¹³C on day 574. Although there was more residual ¹⁵N than ¹³C, the distributions and kinetics of the two isotopes in the fractions were similar.     

Effect of supplied phytosiderophore on 59Fe absorption and translocation in Fe-deficient barley grown hydroponically in low phosphorus media

Hydroponically grown barley plants ( Hordeum vulgare L. cv. Minorimugi) under iron-deficient (–Fe) and high phosphorus (P) conditions (500 µmol L⁻¹) showed Fe chlorosis and lower growth compared with plants grown in –Fe and low P conditions (50, 5 and 0.5 µmol L⁻¹). To understand the physiological role of P in regulating the growth of plants in –Fe medium, we carried out an Fe feeding experiment using four P levels (500, 50, 5 and 0.5 µmol L⁻¹) and phytosiderophores (PS), mugineic acid. Our results suggest that plants grown in a high P medium had higher absorption activity of ⁵⁹Fe compared with plants grown in low P media, irrespective of the presence or absence of added PS. Translocation of ⁵⁹Fe from roots to shoots was not affected by the P level. The relative translocation rate of ⁵⁹Fe increased with decreasing levels of P in the medium. In general, the addition of PS enhanced the absorption of ⁵⁹Fe and its translocation. Taken together these results suggest that the lower relative translocation rate of Fe in high P plants may be induced by the physiological inactivation of Fe in the roots, and the higher absorption activity of Fe in high P conditions possibly results from the response of barley plants to Fe deficiency.     

Fate of Escherichia coli and Escherichia coli O157 in soils and drainage water following cattle slurry application at 3 sites in southern Scotland

Abstract. Slurry from farm animals may contaminate water supplies, rivers and bathing waters with faecal coliforms, such as Escherichia coli . Where animals harbour the O157 strain the hazard to human health is particularly high, but both the hazard level, and the low incidence and sporadic nature of the excretion of E. coli O157 make it difficult to study this strain under field conditions. The survival of total E. coli and of E. coli O157 were compared in the laboratory for two soils under controlled temperature and moisture. E. coli O157 die-off rate was the same as or quicker than for total E. coli . This result meant that field experiments studying the fate of total E. coli should give a satisfactory evaluation of the risk of water contamination by the O157 strain. In four field experiments at three sites, slurry containing total E. coli numbers of 2.2 × 10⁴ to 5.7 × 10⁵ colony forming units per mL (c.f.u. mL^–1) was applied to drained field plots. Field die-off was faster than expected from laboratory experiments, especially in one experiment where two weeks dry weather followed application. In all but this experiment, the first drain flow events after slurry application led to very high E. coli concentrations in the drains (10³ to 10⁴ c.f.u. mL^–1). E. coli O157 was present in the slurry used for two of the experiments (33 c.f.u. per 100 mL in each case). However the proportion of E.coli O157 was very low (about 1 in 10⁵) and it was not detected in the drainage water. After the first week E. coli drainage water numbers decreased rapidly but they were 1–10 c.f.u. mL^–1 for much of the sampling period after slurry application (1–3 months).     

Gaseous nitrogen losses from soil under Sitka spruce following the application of fertilizer 15N urea

Gaseous N loss, through denitrification and NH₃⁻volatilization, was monitored throughout the growing season after spring application of ¹⁵N labelled urea fertilizer to peaty gley soils supporting N-deficient Sitka spruce. From the ¹⁵N data, it was calculated that only about 0.28% of applied N was lost through NH₃-volatilization, almost all within the first few days after fertilizer application. Approximately 0.05% of applied N was calculated to be lost through denitrification. Denitrification decreased slowly over a 4-month period after fertilizer application. Rates of NH₃-volatilization correlated with available NH₄⁺ in the litter layer, while for the early part of the study when N-losses were highest, denitrification rates correlated with available NO₃⁻ in the litter layer. Observations of gaseous N-loss are also discussed in relation to data from lysimetry, changes in soil pH, and the soil moisture regime.     

Influence of the nature of clay minerals on the fixation of radiocaesium traces in an acid brown earth–podzol weathering sequence

The magnitude of radiocaesium fixation by micaceous clay minerals is affected by their transformation, which depends on weathering in soil. The net retention of radiocaesium traces was quantified by sorption–desorption experiments in the various horizons of four sandy soils forming an acid brown earth–podzol weathering sequence derived from sandy sediments and characterized by marked changes in mineral composition. The features of the 2:1 minerals of the four soils, resulting from an aluminization process in depth and a desaluminization process towards the surface, had a strong influence on Cs⁺ fixation. Beneath the desaluminization front, which deepens from the acid brown earth to the podzol, hydroxy interlayered vermiculite was dominant and the ¹³⁷Cs⁺ fixation was the weakest. At the desaluminization front depth, vermiculite was responsible for the strongest ¹³⁷Cs⁺ fixation. In the upper layers, smectite appeared in the podzolized soils and the ¹³⁷Cs⁺ fixation decreased. The magnitude in Cs⁺ fixation therefore appeared as a tracer of the transformation process affecting the 2:1 clay minerals in the acid brown earth–podzol weathering sequence. This magnitude was positively correlated with the vermiculite content of the studied soil materials estimated by the rubidium saturation method.     

Estimation of the density of the protocatechuate-degrading bacterial community in soil by real-time PCR

The β-ketoadipate pathway is the major route for degradation of aromatic compounds by various soil microorganisms. Protocatechuate 3,4-dioxygenase, a key enzyme of this pathway and which is encoded by pcaGH genes, catalyses the ring cleavage of protocatechuate. Microorganisms harbouring pcaGH genes are widely distributed in the environment but little is known about their relative abundance within the total microflora. Hence, this paper reports the development of a real-time PCR assay to quantify the bacterial pcaH sequence that encodes the β sub-unit of the protocatechuate 3,4-dioxygenase. This real-time PCR assay was linear over seven orders of magnitude with a calculated efficiency of 99% and sensitive up to 10² copies of the pcaH sequence per assay. Real-time PCR analyses performed on six soils with different physico-chemical properties, revealed pcaH densities ranging from 10³ to 10⁴ copies of pcaH  ng⁻¹ of soil DNA, which corresponded to approximately 0.2–10.9% of the total bacterial community. The sequencing of real-time PCR amplicons yielded 48 deduced amino acid sequences that exhibited 44–100% identity to known bacterial PcaH sequences, thereby confirming the accuracy of this real-time PCR assay.     

Real-time imaging of nitrogen fixation in an intact soybean plant with nodules using 13N-labeled nitrogen gas

Real-time images of nitrogen fixation in an intact nodule of hydroponically cultured soybean ( Glycine max [L] Merr.) were obtained. In the present study, we developed a rapid method to produce and purify ¹³N-labeled radioactive nitrogen gas (half life: 9.97 min). ¹³N was produced from a ¹⁶O (p, α) ¹³N nuclear reaction. The target chamber was filled with CO₂ and irradiated for 10 min with protons at an energy of 18.3 MeV and an electric current of 5 μA, which was delivered from a cyclotron. All CO₂ in the collected gas was absorbed and removed with powdered soda-lime in a syringe and replaced with helium gas. The resulting gas was injected into gas chromatography and separated and a 35 mL fraction, including the peak of [¹³N]-nitrogen gas, was collected by monitoring the chromatogram. The obtained gas was mixed with 10 mL of O₂ and 5 mL of N₂ and used in the tracer experiment. The tracer gas was fed into the underground part of intact nodulated soybean plants and serial images of the distribution of ¹³N were obtained non-invasively using a positron-emitting tracer imaging system (PETIS). The rates of nitrogen fixation of the six test plants were estimated to be 0.17 ± 0.10 μmol N₂ h⁻¹ from the PETIS image data. The decreasing rates of assimilated nitrogen were also estimated to be 0.012 ± 0.011 μmol N₂ h⁻¹. In conclusion, we successfully observed nitrogen fixation in soybean plants with nodules non-invasively and quantitatively using [¹³N]N₂ and PETIS.     

Nitrogen uptake by sago palm (Metroxylon sagu Rottb.) in the early growth stages

Previous trials have revealed variable responses of sago palm ( Metroxylon sagu Rottb.) to fertilizer application, particularly nitrogen (N). In the present study, we quantified the fertilizer use efficiency (FUE) of sago palm for the first time using ¹⁵N-labeled fertilizer in pot and field experiments. The pot experiment was conducted in Japan using a 2:1 mixture of sand to Philippine soil. The field experiment was conducted in Leyte in the Philippines. Both experiments consisted of three replicates in each of three treatments: control, ¹⁵N urea at 50 kg N ha⁻¹ and ¹⁵N urea at 100 kg N ha⁻¹. The N uptake of sago palm increased significantly, but inconsistently with increasing N application. The few instances of a significant increase in N uptake did not translate into significant improvements in growth parameters, except for the number of leaflets in the pot experiment. The FUE values for sago seedlings (< 6 months) in the pot experiment treated with 50 and 100 kg N ha⁻¹ were 10.5 and 13.2%, respectively, whereas for the 2-year-old sago palms in the field, the corresponding FUE values were 14.8 and 12.0%. The FUE values were similar at the two levels of N application in both experiments. Sago growth parameters appeared to be insensitive to N application, suggesting that the form of N and the timing of N fertilization are important factors for sago palms. Therefore, the use of N fertilizer in sago production can only be justified after determining and fully understanding the response of sago palm to N application.     

Effect of Inorganic N Composition of Fertilizers on Nitrous Oxide Emission Associated with Nitrification and Denitrification

We studied the effect of repeated application (once every 2 d) of a fertilizer solution with different ratios of NH₄⁺ - and NO₃⁻-N on N₂O emission from soil. After the excess fertilizer solution was drained from soil, the water content of soil was adjusted to 50% of the maximum water-holding capacity by suction at 6 × 10³ Pa. Repeated application of NH₄⁺- rich fertilizer solution stimulated nitrification in soil more than NO₃⁻-rich fertilizer. Although the evolution of N₂O through nitrifier denitrification tended to increase with the repeated addition of a fertilizer solution rich in NH₄⁺ rather than in NO₃⁻, the contribution of nitrifier denitrification remained at levels of 20 to 36% of the total emission regardless of the inorganic N composition. The total emission of N₂O also tended to increase with the application of NH₄⁺- rather than NO₃⁻-rich fertilizer. It was suggested that the coupled process of nitrification and denitrification at micro-aerobic sites became important when fertilizer rich in NH₄⁺ was applied to soil under relatively aerobic conditions.     

Distribution of 14C between particle size fractions and carbohydrates separated from a peat incubated with 14C-glycine

Samples of fresh Sphagnum peat from a raised bog were amended with ¹⁴C-labelled glycine. The distribution of ¹⁴C between particle size fractions obtained by wet sieving (sieve sizes 1, 0.5, 0.25, 0.15 and 0.05mm) was determined immediately on control (unincubated) samples and after 1, 6 and 12 months incubation at 10°C. The recovery of glycine in solution was almost 100%. During the incubation with ¹⁴C-glycine, ¹⁴CO₂ was released within the first 20 weeks, equivalent to 51.5% of the added ¹⁴C, but thereafter very little ¹⁴CO₂ was evolved. After 26 weeks a substantial amount of ¹⁴C was distributed amongst all the fractions, but the greatest incorporation (4.47%) occurred in the finest fraction (0.005–0.05 mm). Labelling of the other particle size fractions was <2.3% of added ¹⁴C. Carbohydrate accounted for 23% of ¹⁴C in the finest fraction and the sugars, rhamnose, arabinose, xylose, mannose, galactose and glucose all became labelled. Rhamnose showed the greatest, and arabinose, galactose and xylose the least, increase in specific activity; glucose and mannose had intermediate values. It was concluded that the finest fraction in peat contains a significant proportion of the microbially-synthesized material.     

Gaseous diffusion through peat

Relative gas diffusivity (D/D₀) was measured in peat cores equilibrated to set moisture tensions between zero and - l0 kPa, using the radioactive gas ⁸⁵Kr. A relationship between relative diffusivity and the air filled porosity was obtained, which showed lower values of D/D₀ at air-filled porosities above about 0.13m³m⁻³, and higher values at porosities below about 0.10m³m⁻³ than some of those found in the literature for mineral soils. The likely effects of shrinkage behaviour on drying in the field, on the relationship between D/D₀ and air-filled porosity, are discussed.     

Airborne radiometric survey data and a DTM as covariates for regional scale mapping of soil organic carbon across Northern Ireland

Soil scientists require cost-effective methods to make accurate regional predictions of soil organic carbon (SOC) content. We assess the suitability of airborne radiometric data and digital elevation data as covariates to improve the precision of predictions of SOC from an intensive survey in Northern Ireland. Radiometric data (K band) and, to a lesser extent, altitude are shown to increase the precision of SOC predictions when they are included in linear mixed models of SOC variation. However the statistical distribution of SOC in Northern Ireland is bimodal and therefore unsuitable for geostatistical analysis unless the two peaks can be accounted for by the fixed effects in the linear mixed models. The upper peak in the distribution is due to areas of peat soils. This problem may be partly countered if soil maps are used to classify areas of Northern Ireland according to their expected SOC content and then different models are fitted to each of these classes. Here we divide the soil in Northern Ireland into three classes, namely mineral, organo-mineral and peat. This leads to a further increase in the precision of SOC predictions and the median square error is 2.2 %². However a substantial number of our observations appear to be mis-classified and therefore the mean squared error in the predictions is larger (30.6 %²) since it is dominated by large errors due to mis-classification. Further improvement in SOC prediction may therefore be possible if better delineation between areas of large SOC (peat) and small SOC (non-peat) could be achieved.     

Nitrogen inputs and outputs in a small agricultural catchment in the eastern part of the United Kingdom

Abstract. Nitrate concentrations measured in an ephemeral stream draining a 170 ha clay catchment in eastern England, with about 23% arable land, were greater than 11.3 mg N 1–¹ on the resumption of flow each autumn but then declined. There was also a spring peak in two years out of seven, 1978–1984, which depend on the length of time soils was at field capacity in the preceding winter. Mean annual load measured in rain was 19 kg N ha^-1 and loss of nitrate in the stream 34 kg N ha^-1. A catchment nitrogen balance suggested that inputs, which averaged 130 kg N ha yr^-1, were generally more than outputs, average 108 kg N ha yr^-1', but gaseous losses were not taken into account.     

Kinetic Parameters of Gross N Mineralization of Peat Soils as Related to the Composition of Soil Organic Matter

Peat land has been considered as an alternative type of land for agricultural development especially in the tropics. In the present study, the N-supplying capacity, one of the most important soil properties in terms of crop production, of peat soils was examined. Ten peat soil samples were collected from Indonesia, Malaysia, and Japan. Gross N mineralization in the soil samples was estimated using a zero-order model, and kinetic parameters of mineralization were determined using a simple type model. Soil organic matter composition was investigated using ¹³C CPMAS NMR. Mineralization potential ( N ₀), apparent activation energy ( E _a), and mineralization rate constant ( k ) ranged between 571–2,445 mg kg⁻¹, 281–8,181 J mol⁻¹, and 0.009–0.020 d⁻¹, respectively. Although none of the parameters showed a significant correlation with the soil C/N ratio, a negative correlation was observed between the k value and the ratio of the proportion of alkyl C in total C to that of O -alkyl C estimated by ¹³C CPMAS NMR. The latter suggested that the k values were higher in the peat soils relatively rich in readily decomposable organic matter including carbohydrates.     

Prediction of water retention properties of clayey soils: validity of relationships using a single soil characteristic

Abstract. Regression equations successfully allowed the calculation of water retained at—0.3 × 10⁵ Pa and–15 × 10⁵ Pa matric potentials from single soil characteristics, such as bulk volume or clay content, in clayey horizons derived in similar ways from a single parent material. It is possible to use these regression equations on other soils with similar clay fabrics. The fabric is expressed numerically using the pore volume associated with clay particles.     

Monitoring of water erosion on arable farms in England and Wales. 1990–94

Abstract. The incidence of soil water erosion was monitored in 12 erosion-susceptible arable catchments ( c . 80 fields) in England and Wales between 1990 and 1994. Factors associated with the initiation of erosion were recorded, and the extent of rills and gullies measured. Approximately 80% of the erosion events were on land cropped to winter cereals. In 30% of cases, the initiation of erosion was linked to valley floor features, which concentrated runoff. Poor crop cover, wheelings and tramlines were also assessed as contributory factors in 22%, 19% and 14% of cases, respectively. In c . 95% of cases rainfall events causing erosion were ≥10 mm day⁻¹ and c . 80% were >15 mm day⁻¹. Erosion was also associated with maximum rainfall intensities of >4 mm h⁻¹ for c . 90% of cases and >10 mm h⁻¹ for c . 20%. Mean net soil erosion rates were approximately 4 t ha⁻¹ per annum (median value 0.41 t ha⁻¹ per annum) and associated mean P losses 3.4 kg ha⁻¹.