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从自然感染无浆体的重庆黄牛无菌采集血液,提取全血基因组,用血营养菌16S rRNA基因的通用引物进行PCR扩增,得到长约1500 bp的扩增片段,将其克隆到pMD18-T载体后进行测序,并与5条边缘无浆体、4条中央无浆体、4条牛无浆体、4条羊无浆体和3条嗜吞噬细胞无浆体16S rRNA基因序列进行系统发育分析.结果表明所克隆的基因片段长度为1412 bp,GenBank登录号为FJ169957.序列比较结果显示,所获得的序列与Kawa-hara公布的牛无浆体日本株(AB211163)同源性最高,达到99.0%,系统发育分析发现,该序列被聚类到牛无浆体群,并与嗜吞噬细胞无浆体群聚类到一个大的分支.本文从分子水平证实重庆地区存在牛无浆体,牛无浆体与嗜吞噬细胞无浆体的亲缘关系比其他3种无浆体更近. 相似文献
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新疆昭苏县马感染嗜吞噬细胞无浆体血清学与分子生物学调查 总被引:1,自引:0,他引:1
马属动物是嗜吞噬细胞无浆体的重要天然宿主,旨在弄清新疆昭苏县马感染嗜吞噬细胞无浆体情况和病原特征。对采集的100份马血清进行间接免疫荧光(IFA)检测嗜吞噬细胞无浆体抗体,对阳性样品相对应的DNA样品通过PCR扩增、16S rRNA基因测序、序列比对、完成了分子分型分析。间接免疫荧光法(IFA)检出率为8%(8/100),通过对阳性样品的基因组进行16S rRNA扩增,序列分析进一步确定马存在嗜吞噬细胞无浆体感染情况。分子分型发现存在2种嗜吞噬细胞无浆体基因型,ZS23和ZS40这2种基因型在我国及周边其他国家均有分布,研究结果将为该地区的嗜吞噬细胞无浆体感染情况的调查和防治提供依据。 相似文献
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根据临床常见致病菌16S-23S rRNA基因间隔序列(ISR)两端的16S及23S rRNA保守序列设计PCR扩增的通用引物,对9株奇异变形杆菌和6株相近菌株应用通用引物PCR扩增16S-23S rRNA ISR序列.通过PCR长度多态性比较、RFLP分析以及部分序列测序比较,分析鉴别奇异变形杆菌.结果显示,PCR长度多态性可以将奇异变形杆菌同其余菌种进行区分;RFLP分析可以将所有试验菌种进行区分;部分序列测序可以对奇异变形杆菌进行分型.由此表明,16S 23S rRNA ISR序列PCR及RFLP分析可以简单、快速、准确的鉴定奇异变形杆菌. 相似文献
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为了解南疆部分高山牦牛感染牛无浆体的情况,将2018年采集于巴音郭勒蒙古自治州哈尔诺尔牧场和喀什塔什库尔干塔吉克自治县的牦牛血样,以16S rRNA基因通用引物对提取的牦牛全血DNA进行PCR检测,并测序鉴定。结果显示,成功扩增了约1 500 bp左右的目的片段;哈尔诺尔牧场牦牛无浆体感染率为61.1%,塔什库尔干塔吉克自治县牦牛无浆体感染率为62.5%;阳性片段与基因库已记载的韩国牛无浆体相似性为98%,进化树分析显示与牛无浆体聚为一支。本研究为新疆高山牦牛无浆体病的防控提供依据。 相似文献
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从自然感染附红细胞体的湖北黄牛无菌采集血液,分离附红细胞体并提取病原基因组,用血营养菌的16SrRNA基因的通用引物进行PCR扩增,得到长约1.5kb的扩增片段,将其克隆到pMD18-T载体后进行测序和分析.结果表明该片段全长为1 471 bp(GenBank收录号为AY946266),同源性分析表明该序列与Neimark公布的温氏附红细胞体(AF016546)的16S rRNA基因序列同源性达到98.7%,证实该病原为温氏附红细胞体,从分子生物学水平证实了温氏附红细胞体在湖北省的存在.将该序列与5种支原体、14种血营养菌及边缘无浆体等的相应序列进行比较,建立系统发育树,结果表明温氏附红细胞体同边缘无浆体的关系较远,而与肺炎支原体组的亲缘关系较近. 相似文献
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旨在建立快速检测环形泰勒虫和牛无浆体的双重PCR方法,调查吐鲁番地区这2种病原感染情况。根据NCBI库中上传的环形泰勒虫Spm2、Tams1基因和牛无浆体16S rRNA基因保守序列设计、合成3对特异性引物,使用PCR扩增并测序。根据Spm2和16S rRNA基因设计双重PCR并对反应体系及条件进行优化,对该方法进行特异性、灵敏性和重复性检测,建立一种双重PCR方法。结果显示,双重PCR方法特异性扩增出环形泰勒虫和牛无浆体相应目的片段,片段大小分别为853,351 bp,而驽巴贝斯虫、马泰勒虫、绵羊无浆体和伊氏锥虫均未扩增出条带。对环形泰勒虫Spm2、Tams1和牛无浆体16S rRNA基因序列进行系统发育分析,环形泰勒虫Spm2基因序列与印度株同源关系最近(MH844677)、Tams1基因序列与突尼斯株同源关系近(AF214899),牛无浆体16S rRNA基因序列与突尼斯株同源关系近(KY655808)。此方法能检测环形泰勒虫与牛无浆体最低浓度分别为2.9×10-16,1.8×10-19 g/μL。用该方法对临床60份牛血DNA进行双重... 相似文献
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无菌采集感染温氏附红细胞体(E.wenyoni)的牛血液,抽提E.wenyoni基因组DNA,参考GenBank发表的E.wenyoni 16S rRNA基因序列(AF016546),设计1对特异性引物,扩增并克隆E.wenyoni 16S rRNA部分基因,基因产物大小为1 005 bp.序列比较结果显示,所测序列与参考序列(AF016546)同源性最高.达97.9%.系统发育分析表明,所测序列与支原体属病原代表种的序列接近.同源性约为70%,而与无浆体科病原代表种的序列相差较远,同源性约为50%.可见,E.wenyoni应归为支原体属,而不应属于立克次氏体目、无浆体科. 相似文献
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This study was aimed at determining the cause of the diseases in five horses exhibiting symptoms of fever, joint oedema and ataxia and thrombocytopenia. The PCR technique revealed the presence in the blood of 16S RNA Anaplasma/Ehrlichia spp. genetic material. DNA amplification with primers EHR 521 and EHR 747 gave a product with a size of 247 bp. The sequence of the PCR product obtained showed a 97.6-99.6% similarity with a sequence of a fragment of 16S RNA Anaplasma phagocytophilum, gene number EU 090186 from GenBank. Intravenous administration of oxytetracycline at a dose of 8 mg/kg of body mass for 7 days resulted in a gradual recovery. 相似文献
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Species of the genus Anaplasma (Rickettsiales: Anaplasmataceae) are obligate intracellular tick borne pathogens. Three species
of Anaplasma that infect cattle and sheep (A. marginale, A. centrale and A. ovis) are well recognized. Of these erythrocytic Anaplasma, A. marginale can cause diseases in the livestock with high economical losses. Species-specific PCR based on 16S rRNA gene is commonly
used for detection of Anaplasma species but can not differentiate A. marginale, A. centrale and A. ovis because of sequence similarity. In this study DNA extraction was performed on 50 blood samples with presence of Anaplasma spp. in marginal point of erythrocytes in their blood smears. The extracted DNA from blood cells was analyzed by PCR and PCR-RFLP
using primers derived from 16S rRNA gene and restriction endonuclease Bst1107 I. The restriction endonuclease Bst1107I only
recognizes the sequence (GTATAC) in corresponding PCR product of A. marginale and cut it. The nucleotide sequence of the A. marginale 16S rRNA gene was determined and compared with the sequences of A. marginale in GenBank. The 16S rRNA of A. marginale in Iran was completely similar to the related sequence deposited in GenBank at accession number of M60313. In the present
study we propose a new PCR-restriction fragment length polymorphism analysis (RFLP) method based on 16S rRNA gene for specific
detection of A. marginale. 相似文献
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羊泰勒虫PCR检测方法的建立和初步应用 总被引:1,自引:0,他引:1
利用羊泰勒虫18SrRNA基因的序列特点,设计合成种特异性引物,建立羊泰勒虫PCR检测方法,该方法能特异性扩增398bp的羊泰勒虫18SrRNA基因片段,而对羊巴贝斯虫、羊无浆体、牛环形泰勒虫和牛伊氏锥虫的基因组DNA没有扩增带出现。对羊泰勒虫基因组DNA的最小检测量为0.12fgDNA。通过检测124份临床样品,24份为羊泰勒虫感染阳性,其余为阴性。结果表明,建立的PCR检测方法具有极高的敏感性和特异性,可用于羊泰勒虫病和临床健康带虫羊的诊断。 相似文献
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目的克隆边缘无浆体MSP5基因,构建重组质粒,并进行表达与鉴定。方法根据GenBank公布的边缘无浆体MSP 5基因序列(AY714547)设计一对引物,无菌颈静脉采集边缘无浆体阳性的牛血,用PCR方法从4血的DNA模板中扩增MSP 5基因582bp的片断。将该片段克隆到原核表达载体pGEX-KG中,构建原核表达载体KG-MSP5,转化BL21,经IPTG的诱导表达蛋白。利用BugBuster GST Bind Purification Kit将其纯化,经Western blotting进行分析。结果重组质粒KG-MSP5,转化BL21,在IPTG的诱导下表达大小约46 kPa蛋白。western blotting分析表明其具有很好的免疫原性。结论本研究为边缘无浆体的血清学诊断试剂盒的研制奠定了基础。 相似文献
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Molad T Mazuz ML Fleiderovitz L Fish L Savitsky I Krigel Y Leibovitz B Molloy J Jongejan F Shkap V 《Veterinary microbiology》2006,113(1-2):55-62
A reverse line blot hybridization (RLB) one-stage nested PCR (nPCR) for Anaplasma centrale and a nested PCR for Anaplasma marginale were used to detect infected cattle grazing within an endemic region in Israel. A novel set of PCR primers and oligonucleotide probes based on a 16S ribosomal RNA gene was designed for RLB detection of both Anaplasma species, and the performance of the molecular assays compared. The immunofluorescent antibody test (IFA) was used to detect antibodies to both Anaplasma species, whereas, a highly sensitive and specific competitive enzyme-linked immunosorbent assay (cELISA) was used to detect antibodies in A. centrale-vaccinated cattle. The RLB and the nested PCR procedures showed bacteremia with sensitivity of 50 infected erythrocytes per milliliter. Up to 93% of the A. centrale vaccinates carried specific antibodies that were detected by cELISA, and up to 71% of the vaccinated cattle were found to be naturally infected with A. marginale according to the PCR and the RLB assays. Nevertheless, no severe outbreaks of A. marginale infection occurred among vaccinated herds in this endemic region. It appears that both, molecular tools and serology are useful for evaluation of the vaccine efficacy. In the light of wide natural field infection with A. marginale, strong recommendations to continue the A. centrale vaccination program regime will continue until a new generation of non-blood-based vaccine will be developed. 相似文献
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Adaszek L Klimiuk P Skrzypczak M Górna M Zietek J Winiarczyk S 《Polish journal of veterinary sciences》2012,15(2):393-394
The aim of the present study was to investigate the occurrence of Anaplasma spp. in group of 50 fallow deer (Dama dama) from free-range farm in eastern Poland and determine what species of Anaplasma could infect these animals based on PCR gene sequencing. The PCR technique revealed the presence of 16S RNA Anaplasma spp. genetic material in the blood of 7 out of 50 examined animals. The sequences of the PCR products obtained showed a 100% homology with each other and 100% homology with GU 183908 sequence of A. phagocytophilum, isolated in our earlier study from a horse with clinical form of anaplasmosis. Here, we report the first molecular evidence of Anaplasma spp. among naturally infected fallow deer in eastern Poland. 相似文献
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猪附红细胞体PCR检测方法的建立和初步应用 总被引:22,自引:1,他引:22
基于猪附红细胞体广东株16S rRNA基因的序列特点,设计合成种特异性引物,建立了猪附红细胞体PCR检测方法。该方法能特异性扩增523bp的猪附红细胞体16SrRNA基因片段,而对猪丹毒杆菌G4T10株、猪链球菌STl71株、多杀性巴氏杆菌E0630株、猪胸膜肺炎放线杆菌、猪肺炎支原体、鸡毒支原体和猫血巴尔通氏体CA株的基因组DNA没有扩增带出现。对猪附红细胞体基因组DNA的最小检测量为160pg。通过对38份临床样品的检测,8份为猪附红细胞体感染阳性,其余为阴性。结果表明,建立的PCR检测方法具有极高的敏感性和特异性,可用于急性猪附红细胞体病和临床健康带菌猪的诊断。 相似文献
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猪附红细胞体16S rRNA基因的序列测定和系统进化分析 总被引:11,自引:3,他引:11
从确诊为猪附红细胞体感染的猪场,无菌采集血样,抽提猪附红细胞体基因组DNA,采用真细菌的通用引物进行16S rRNA基因扩增,对扩增产物进行克隆和测序。从3个地理位置不同的猪场均成功地扩增出长度为1469bp的核苷酸序列。系统进化分析表明,3个猪场样品所测序列一致性达99.52%以上,具有相同的基因型,但与国外报道的猪附红细胞体Illinois株同源性为95%,属于同一基因群,但基因型不同;所有种类的附红细胞体和血巴尔通氏体组成同一进化分支,这类血营养菌与支原体科,支原体属的病原最靠近(75%),而与立克次氏体目的病原较远(70%)。上述研究证实,广东所流行的猪附红细胞体是一种新基因型的猪附红细胞体,建议命名为猪附红细胞体广东株型;为反映进化关系,猪附红细胞体和其它血营养菌应划归于支原体科的支原体属。 相似文献