南昌地区蔬菜冰核活性细菌分离鉴定

本研究对南昌地区蔬菜作物上的冰核活性细菌的进行分离鉴定,得到高冰核活性细菌3株,其中活性较强的初步鉴定为欧文氏菌属(Erwinia spp.)2株,假单胞菌属(Pesudomonas spp.)1株.初步了解了南昌地区蔬菜上冰核活性细菌的主要种群为假单胞菌属和欧文氏菌属.     

星油藤青枯病病原菌鉴定

 星油藤(Plukenetia volubilis L.) 是一种重要的藤本油料植物,在我国华南地区广泛种植。青枯病是近两年在海南星油藤种植区发生的新病害,为探究星油藤青枯病菌的基本特性及种下分化情况,本研究对分离的6株代表菌株进行了相关分析。细菌学鉴定及致病性测定结果表明,该病害是由类茄科雷尔氏菌(Ralstonia pseudosolanacearum)侵染引起。同时,从传统分类及分子生物学不同层面分析了星油藤青枯病菌的遗传分化情况。生理小种及生化变种的测试结果表明,星油藤青枯病菌属于1号生理小种和生化变种Ⅲ;16S rDNA和egl基因部分序列聚类分析显示,星油藤青枯病菌属类茄科雷尔氏菌演化型Ⅰ即亚洲分支菌株,序列变种34。     

一种快速鉴定玉米细菌性枯萎病菌的新技术——噬菌体株系鉴别法

利用８株玉米细菌性枯萎病菌噬菌体专化性的差异，结合氯化三苯基四氮唑（２，３，５－ｔｒｉｐｈｅｎｙｌｔｅｔｒａｚｏｌｉｕｍｃｈｌｏｒｉｄｅ）对不同致病力细菌显色反应的不同，组成了一种新的细菌快速鉴定技术，称为噬菌体株系鉴别法，可鉴定玉米细菌性枯萎病菌直至株系。用这个方法鉴定了从美国、日本、南斯拉夫、西德和罗马尼亚进口的玉米种子中截获的许多玉米细菌性枯萎病菌菌株，结果准确快速，并和血清学鉴定及致病性测定的结果相一致     

星油藤青枯病病原菌鉴定

 星油藤(Plukenetia volubilis L.) 是一种重要的藤本油料植物,在我国华南地区广泛种植。青枯病是近两年在海南星油藤种植区发生的新病害,为探究星油藤青枯病菌的基本特性及种下分化情况,本研究对分离的6株代表菌株进行了相关分析。细菌学鉴定及致病性测定结果表明,该病害是由类茄科雷尔氏菌(Ralstonia pseudosolanacearum)侵染引起。同时,从传统分类及分子生物学不同层面分析了星油藤青枯病菌的遗传分化情况。生理小种及生化变种的测试结果表明,星油藤青枯病菌属于1号生理小种和生化变种Ⅲ;16S rDNA和egl基因部分序列聚类分析显示,星油藤青枯病菌属类茄科雷尔氏菌演化型Ⅰ即亚洲分支菌株,序列变种34。     

进境菜豆种子中普通细菌性疫病菌的分离和鉴定

对经甘肃口岸进境的30批菜豆Phaseolus vulgaris种子进行了普通细菌性疫病菌的检测,利用选择性培养基MT从波兰进境菜豆种子上分离到1株细菌597,对该分离物进行菌落形态特征观察、致病性测定、16S rDNA及16S-23S rDNA ITS序列分析和特异性PCR检测。结果表明,该分离物在MT培养基上菌落呈黄色、圆形、黏稠、表面光滑向外隆起、菌落周围有水解圈。分离物597接种菜豆幼苗后导致叶片枯萎,接种点干枯。结合菌落形态、16S-23S rDNA ITS序列、特异性PCR检测结果,将分离物597鉴定为地毯草黄单胞杆菌菜豆致病变种Xanthomonas axonopodis pv.phaseoli。     

木薯细菌性萎蔫病菌的检疫方法研究

本文对木薯细菌性萎蔫病菌的致病性测定、细菌的分离、细菌的培养条件和培养基选择、细菌的生理生化测定、分子生物学鉴定方法等方面进行了系统研究，确定了该病菌的菌落鉴定特征，建立了从木薯繁殖材料上进行病原菌检测的快速、灵敏、准确的PCR检测方法。     

菜豆萎蔫病菌的血清检测鉴定技术研究

本研究对我国一类检疫性有害生物菜豆萎蔫病菌（Ｃｕｒｔｏｂａｃｔｅｒｉｕｍｆｌａｃｕｍｆａ－ｃｉｅｎｓｐｖ．ｆｌａｃｕｍｆａｃｉｅｎｓ，Ｃｆ）进行血清检测鉴定技术的研究。试验中制备了抗Ｃｆ的血清，应用抗００２０，０２３７，０２３８菌株的抗血清及其ＦＩＴＣ标记的抗体进行间接和直接免疫荧光染色试验（ＩＦ／ＩＦ）。通过对１９个Ｃｆ菌株和其它６个属１４个种的植物病原细菌２０个菌株的测定，结果发现约５０％的Ｃｆ菌株为强阳性反应，且与Ｃｆ种下致病变种也有强阳性交叉反应。由于单个血清检测易产生假阴性反应，故将三种血清１∶１∶１混合后进行ＩＦ试验，结果表明与所有的Ｃｆ菌株反应，且与Ｒｆａ和Ｃｍｔ有弱阳性反应。对含１０４～１０７ｃｆｕ／ｍｌ细菌及３０ｇ种子含１粒人工接种种子的种子抽提液均能检测到典型的阳性细胞，血清检测的灵敏度为４．５×１０４ｃｆｕ／ｍｌ，可用于种子的检测。本研究还进行了初步的免疫荧光菌落染色（ＩＦＣ）试验     

菜豆萎蔫病菌的种子检验鉴定技术研究

本研究对我国一类检疫性有害生物菜豆萎蔫病菌Ｃｕｒｔｏｂａｃｔｅｒｉｕｍｆｌａｃｃｕｍｆａ－ｃｉｅｎｓｐｖ．ｆｌａｃｕｍｆａｃｉｅｎｓ（Ｃｆ）进行种子检测鉴定技术的研究，发现５２３，ＮＢＹ＋ＴＴＣ和ＮＢＹ＋刚果红三种培养基均可作为分离培养基；对带菌种子分离的灵敏度为１．８×１０２ｃｆｕ／ｍｌ，病叶柄和茎是分离的最佳部位，病菌可通过种子传给种苗引起种苗发病，发病时间为７～２０天，针刺接种是Ｃｆ最有效的接种方法，接种发病率为１００％。使用标准化的Ｂｉｏｌｏｇ鉴定系统鉴定病原，在种水平的鉴定准确率达９８．５％。     

一串红穿孔病病原鉴定和初侵染源分析

 2021年夏季,受台风“烟花”影响,上海市奉贤区海湾镇大面积一串红种苗突发穿孔病,本文按照柯赫氏法则鉴定病原物并进行初侵染源分析。从田间病样中分离出的黄色分离物YchA回接一串红形成穿孔症状,在非寄主本氏烟草上可激发过敏反应。16S rDNA序列分析显示YchA为黄单胞菌属;以持家基因fyuA、gyrB、rpoD进行多位点序列分析(Multi-locus sequence analysis, MLSA)发现,菌株YchA与核桃细菌性黑斑病菌(Xanthomonas arboricola pv. juglandis, Xaj)亲缘关系最近;Biolog鉴定系统分析显示,一串红穿孔病病原为Xaj的可能性约为68%。对育苗基质、种子和灌溉水的检测发现,种子和灌溉水带菌。这些结果表明,一串红细菌性穿孔病的病原为树生黄单胞菌(X. arboricola),可能是一个新致病变种;种子带菌是病害的初侵染来源,灌溉水带菌扩散。     

水稻纹枯病拮抗细菌的种群分布及其生物多样性研究

 通过对从菲律宾Laguna省水稻植株上分离获得的700个细菌菌株进行离体与生物测定发现:在水稻生态系统中,存在着大量格兰氏阴性、非致病性、对纹枯病有拮抗作用的细菌。用Biolog微板的方法鉴定了195个细菌菌株的种类。在147个格兰氏阴性菌株中有14个属39个种,在48个格兰氏阳性菌株中有8个属13个种。在195个被测菌株中最为常见的种是Stenotrophomonas maltophilia,Pseudomonas aeruginosa和Pseudomonas pudita,并且上述3个种内具有拮抗性能较强菌株的比例相当高。因此,这3个种的细菌对水稻病害的生物防治很有潜力。用PCR的方法分析上述3个细菌种部分菌株的生物多样性,结果表明:同一属不同种菌株之间的DNA带谱有一定的交叉;不同属之间的DNA带谱的差异明显大于种之间的差异。     

番茄溃疡病菌的PCR-DHPLC快速检测

根据番茄溃疡病菌ITS序列,设计并合成了PCR-DHPLC检测引物,对番茄溃疡病菌及其他病菌共10个标准菌株进行了PCR-DHPLC检测。结果表明,番茄溃疡病菌的PCR-DHPLC检测图谱出现了特异性吸收峰,而其他病菌均未在相同洗脱时间出现吸收峰,说明这种方法具有检测番茄溃疡病菌的特异性。灵敏度实验结果表明,PCR-DHPLC体系与PCR-琼脂糖凝胶电泳体系的检测灵敏度一致。研究表明,PCR-DHPLC方法是一种特异、灵敏、快速的番茄溃疡病菌检测方法。     

苜蓿萎蔫病菌TaqMan探针实时荧光PCR检测方法的建立

苜蓿萎蔫病菌是我国对外检疫性二类有害生物，目前国内尚无发生6在出入境捡验检疫中主要是采用生物学和血清学方法进行检测，劳动强度大，耗费时间长。根据苜蓿萎蔫病菌与其它细菌菌株16SrDNA序列差异，设计出对苜蓿萎蔫病菌具有稳定点突交特异性探针，利用该探针对棒形杆菌属4个种及其它属细菌进行了实时荧光PCR检测实验。结果表明，只有苜蓿萎蔫病菌能检测到荧光信号，其它细菌没有荧光产生。该方法特异性强，灵敏度高，能检测到21．4fg质粒DNA，比常规PCR灵敏100倍，而且整个过程只需要2～3h。该方法可有效地应用于进出境病原菌检测之中。     

Comparative dynamics of adherent and nonadherent bacterial populations on maize leaves

ABSTRACT The dynamics of the adherent and nonadherent populations of three bacterial species on maize leaves were examined to identify the extent to which bacteria adhere to leaves and the importance of this adhesion to leaf colonization. Pantoea agglomerans strain BRT98, Clavibacter michiganensis subsp. nebraskensis strain GH2390, and Pseudomonas syringae pv. syringae strain HS191R all rapidly adhered to maize leaves following inoculation, but differed in the percentage of cells that adhered to the leaves. Immediately following inoculation, the percentage of adherent cells was highest for the saprophyte P. agglomerans (8 to 10%) and was much lower for the pathogens C. michiganensis subsp. nebras-kensis and P. syringae pv. syringae (2 to 3 and <1%, respectively), although the results for P. syringae pv. syringae HS191R were based on only one experiment. In the 4 days following inoculation, the percentage of the P. agglomerans populations that adhered to the leaves increased to approximately 70%. Similarly, the percentage of C. michiganensis subsp. nebraskensis and P. syringae pv. syringae cells that resisted removal steadily increased in the days following inoculation, although these increases probably reflected both adherence and localization to endophytic sites. Based on differences in the percentage of cells adhering to several cuticular wax mutants of maize, the rapid adherence of C. michiganensis subsp. nebraskensis cells to maize leaves was influenced by the cuticular wax properties, while the rapid adherence of P. agglomerans was not. Finally, bacterial adherence to leaves was advantageous to P. agglomerans survival and growth on leaves based on the finding that the nonadherent populations of the P. agglomerans strain decreased significantly more than did the adherent populations in the 24 h following inoculation, and increased much less than did the adherent populations over the next 3 days. Similar results with the C. michiganensis subsp. nebraskensis and P. syringae pv. syringae strains indicate that bacterial adherence to leaves, bacterial movement to endophytic sites, or both were advantageous to the survival and growth of these strains on leaves.     

进境澳大利亚绿豆中菜豆细菌性萎蔫病菌的检测

利用NA培养基从澳大利亚进境绿豆样品中分离到一株疑似菜豆细菌性萎蔫病菌（Curtobacterium flaccumfaciens pv. flaccumfaciens,Cff）的细菌分离物2000-1,对该分离物进行革兰染色试验、PCR检测、多位点序列分析和致病性测试。分离物在NA平板上菌落浅黄色,圆形,隆起,黏性,有光泽且边缘整齐,革兰染色阳性。特异引物CffFOR2/CffREV4可扩增出306 bp的预期产物。分离物2000-1的16S rRNA序列与Cff菌株ATCC 51876完全一致,与GenBank中Cff菌株P990的序列相似性为99.58%,序列差异为3 nt。基于6个看家基因（atpD、dnaK、gyrB、ppK、recA和rpoB）的系统发育树显示,分离物2000-1与Cff相关种处于同一分支,与其中巴西大麦Cff分离物3185 UNESP亲缘关系最近,而与菌株ATCC 51876处于不同分支。分离物人工接种可引起大豆叶片水渍状病斑,大豆叶片出现萎蔫和焦枯,病斑周围伴有金黄色晕圈。根据以上测试结果,将分离物2000-1鉴定为菜豆细菌性萎蔫病菌（Curtobact...     

Silencing of host basal defense response-related gene expression increases susceptibility of Nicotiana benthamiana to Clavibacter michiganensis subsp. michiganensis

Clavibacter michiganensis subsp. michiganensis is an actinomycete, causing bacterial wilt and canker disease of tomato (Solanum lycopersicum). We used virus-induced gene silencing (VIGS) to identify genes playing a role in host basal defense response to C. michiganensis subsp. michiganensis infection using Nicotiana benthamiana as a model plant. A preliminary VIGS screen comprising 160 genes from tomato known to be involved in defense-related signaling identified a set of 14 genes whose suppression led to altered host-pathogen interactions. Expression of each of these genes and three additional targets was then suppressed in larger-scale VIGS experiments and the effect of silencing on development of wilt disease symptoms and bacterial growth during an N. benthamiana-C. michiganensis subsp. michiganensis compatible interaction was determined. Disease susceptibility and in planta bacterial population size were enhanced by silencing genes encoding N. benthamiana homologs of ubiquitin activating enzyme, snakin-2, extensin-like protein, divinyl ether synthase, 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2, and Pto-like kinase. The identification of genes having a role in the host basal defense-response to C. michiganensis subsp. michiganensis advances our understanding of the plant responses activated by C. michiganensis subsp. michiganensis and raises possibilities for devising novel and effective molecular strategies to control bacterial canker and wilt in tomato.     

番茄溃疡病菌PCR快速检测技术

番茄溃疡病是一种严重危害番茄生产的细菌性病害，许多国家将其列为检疫性病害。利用ITS通用引物扩增了番茄溃疡病菌（Clavibacter michiganensis subsp．michiganensis）的ITS序列，并进行克隆测序。根据序列比较结果设计了引物BT1和BT2，该引物特异性好，能专一扩增出268bp电泳条带，而马铃薯环腐病菌等不同亚种、不同属的细菌及健康的番茄材料均无扩增条带。从接种但未显症番茄苗叶片及人工模拟染菌种子上提取总DNA，以此为模板均能稳定地扩增出特异性目的条带。该方法直接对种子或植株进行检测，不需进行病原菌分离培养，快速简便，适用于出入境检验检疫及种苗健康检测领域。     

落葵上发现短小杆菌属(Curtobacterium)一个新的致病变种

 1994年在江苏省南京及镇江地区新发现了落葵细菌性叶斑病,从病斑所分离的10个细菌菌株经柯赫氏法则验证,均确系该病的病原菌。采用形态观察、表型特征和生理生化特性测定、数值分析、血清学反应、细胞化学成分分析和DNAG+C mol%测定进行了鉴定,并与植物病原棒形细菌15个标准菌株进行了比较。该病原菌为革兰氏阳性细菌,不规则短杆状,有一根鞭毛,亚极生或侧生,结合其生理生化特性、细胞化学成分和DNAG+C mol%测定结果,认为应属于短小杆菌属(Curtobacterium)的萎蔫短小杆菌(Cur.flaccumfaciens),数值分析也支持这一结论。此外,据血清学反应结果及其对短小杆菌属的其它植物寄主的致病情况,认为该病原菌应是萎蔫短小杆菌种下一个新的致病变种,定名为Curtobacterium flaccumfaciens pv.basellae pv.nov.(萎蔫短小杆菌落葵致病变种)。     

An oligonucleotide array for the identification and differentiation of bacteria pathogenic on potato

ABSTRACT Oligonucleotides, 16 to 24 bases long, were selected from the 3' end of the 16S gene and the 16S-23S intergenic spacer regions of bacteria pathogenic on potato, including Clavibacter michiganensis subsp. sepedonicus, Ralstonia solanacearum, and the pectolytic erwinias, including Erwinia carotovora subsp. atroseptica and carotovora and E. chrysanthemi. Oligonucleotides were designed and formatted into an array by pin spotting on nylon membranes. Genomic DNA from bacterial cultures was amplified by polymerase chain reaction using conserved ribosomal primers and labeled simultaneously with digoxigenin-dUTP. Hybridization of amplicons to the array and subsequent serological detection of digoxigenin label revealed different hybridization patterns that were distinct for each species and subspecies tested. Hybridization of amplicons generally was restricted to appropriate homologous oligonucleotides and cross-hybridization with heterologous oligonucleotides was rare. Hybridization patterns were recorded as separate gray values for each hybridized spot and revealed a consistent pattern for multiple strains of each species or subspecies isolated from diverse geographical regions. In preliminary tests, bacteria could be correctly identified and detected by hybridizing to the array amplicons from mixed cultures and inoculated potato tissue.     

rep-PCR-Mediated Genomic Fingerprinting: A Rapid and Effective Method to Identify Clavibacter michiganensis

ABSTRACT The genomic DNA fingerprinting technique known as repetitive-sequence-based polymerase chain reaction (rep-PCR) was evaluated as a tool to differentiate subspecies of Clavibacter michiganensis, with special emphasis on C. michiganensis subsp. michiganensis, the pathogen responsible for bacterial canker of tomato. DNA primers (REP, ERIC, and BOX), corresponding to conserved repetitive element motifs in the genomes of diverse bacterial species, were used to generate genomic fingerprints of C. michiganensis subsp. michiganensis, C. michiganensis subsp. sepedonicus, C. michiganensis subsp. nebraskensis, C. michiganensis subsp. tessellarius, and C. michiganensis subsp. insidiosum. The rep-PCR-generated patterns of DNA fragments observed after agarose gel electrophoresis support the current division of C. michiganensis into five subspecies. In addition, the rep-PCR fingerprints identified at least four types (A, B, C, and D) within C. michiganensis subsp. michiganensis based on limited DNA polymorphisms; the ability to differentiate individual strains may be of potential use in studies on the epidemiology and host-pathogen interactions of this organism. In addition, we have recovered from diseased tomato plants a relatively large number of naturally occurring avirulent C. michiganensis subsp. michiganensis strains with rep-PCR fingerprints identical to those of virulent C. michiganensis subsp. michiganensis strains.     

Specific Detection of Clavibacter michiganensis subsp. sepedonicus by Amplification of Three Unique DNA Sequences Isolated by Subtraction Hybridization

ABSTRACT Three single-copy, unique DNA fragments, designated Cms50, Cms72, and Cms85, were isolated from strain CS3 of Clavibacter michiganensis subsp. sepedonicus by subtraction hybridization using driver DNA from C. michiganensis subsp. insidiosus, C. michiganensis subsp. michiganensis, and Rhodococcus facians. Radio-labeled probes made of these fragments and used in Southern blot analysis revealed each to be absolutely specific to all North American C. michiganensis subsp. sepedonicus strains tested, including plasmidless and nonmucoid strains. The probes have no homology with genomic DNA from related C. michiganensis subspecies insidiosus, michiganensis, and tessellarius, nor with DNA from 11 additional bacterial species and three unidentified strains, some of which have been previously reported to display cross-reactivity with C. michiganensis subsp. sepedonicus-specific antisera. The three fragments shared no homology, and they appeared to be separated from each other by at least 20 kbp in the CS3 genome. Internal primer sets permitted amplification of each fragment by the polymerase chain reaction (PCR) only from C. michiganensis subsp. sepedonicus DNA. In a PCR-based sensitivity assay using a primer set that amplifies Cms85, the lowest level of detection of C. michiganensis subsp. sepedonicus was 100 CFU per milliliter when cells were added to potato core fluid. Erroneous results that may arise from PCR artifacts and mutational events are, therefore, minimized by the redundancy of the primer sets, and the products should be verifiable with unique capture probes in sequence-based detection systems.