Ribosomal DNA sequences indicate isolated populations of Ichthyophonus hoferi in geographic sympatry in the north-eastern Pacific Ocean

Infections of Ichthyophonus hoferi, a cosmopolitan parasite of marine fish, have recently been reported in rockfish, Sebastes spp., from the north‐eastern Pacific. Because I. hoferi also infects Pacific herring, Clupea pallasi Valenciennes, and salmonids in this region, we wanted to determine if Ichthyophonus parasites from rockfishes, Pacific herring and chinook salmon, Oncorhynchus tshawytscha (Walbaum), were the same. Small subunit ribosomal deoxyribonucleic acid sequence data revealed two haplotypes that were fixed among host species in geographic sympatry, one from rockfish and the other from both Pacific herring and salmon. These isolated populations of Ichthyophonus could be part of the same species that are ecologically separated because of host behaviours, or they could be distinct species that are host specific. Dietary patterns of the hosts indicate that ecological separation among hosts is possible, but the presence of distinct species may better explain the observed Ichthyophonus haplotype association with host species.     

Gastric dilation and air sacculitis in farmed chinook salmon, Oncorhynchus tshawytscha (Walbaum)

A syndrome affecting cultured chinook salmon, Oncorhynchus tshawytscha (Walbaum), characterized by distended abdomens, gastric dilation, air sacculitis (GDAS), increased feed conversion rates and increased mortality has been recognized in New Zealand. Affected fish were most obvious in sea cages but were also present in fresh water. Mortality rates associated with this condition were highest in late summer and approached 6% per month. A dilated and flaccid stomach, without visible rugal folds containing copious oil, watery fluid or undigested feed was typical. Gastric mucosal ulceration or inflammation were not present. The air sacculitis consisted of a thickened, dilated bladder with a mixed mucosal inflammatory infiltrate and a luminal exudate associated with large numbers of morphologically diverse bacteria. Gastric dilation or air sacculitis occurred alone or together in the same fish. In a group of 20 subclinically affected fish with or without gastric dilation, there were no significant differences in weight, length, serum osmolality, sodium, total protein or packed cell volume. Twenty-three severely affected fish had significantly ( P  < 0.05) higher serum osmolality but similar sodium and total protein to that of clinically normal fish.     

Differences in Ichthyophonus prevalence and infection severity between upper Yukon River and Tanana River chinook salmon, Oncorhynchus tshawytscha (Walbaum), stocks

Two genetically distinct populations of chinook salmon, Oncorhynchus tshawytscha (Walbaum), were simultaneously sampled at the confluence of the Yukon and Tanana rivers in 2003. Upper Yukon-Canadian fish had significantly higher infection prevalence as well as more severe infections (higher parasite density in heart tissue) than the lower Yukon-Tanana River fish. Both populations had migrated the same distance from the mouth of the Yukon River at the time of sampling but had significantly different distances remaining to swim before reaching their respective spawning grounds. Multiple working hypotheses are proposed to explain the differences between the two stocks: (1) the two genetically distinct populations have different inherent resistance to infection, (2) genetically influenced differences in feeding behaviour resulted in temporal and/or spatial differences in exposure, (3) physiological differences resulting from different degrees of sexual maturity influenced the course of disease, and (4) the most severely infected Tanana River fish either died en route or fatigued and were unable to complete their migration to the Tanana River, thus leaving a population of apparently healthier fish.     

Carcass selenium loss as an indicator of stress in barge transported chinook salmon (Oncorhynchus tshawytscha Walbaum) smolts

Two salmon smolt barge transport experiments were conducted to measure tissue trace element selenium (Se) loss during the 30 h transport 500 km downriver past seven hydroelectric dams on the Columbia River. Carcass Se was measured before and after the barge trip. Liver glutathione peroxidase (GTPX) activity and total ascorbate concentrations were assayed to correlate Se loss with GTPX levels. Hatchery‐reared smolt chinook salmon, Oncorhynchus tshawytscha (Walbaum), were tested before and after barging. Liver ascorbate concentrations, measured by high‐performance liquid chromatography techniques, showed levels adequate to support GTPX activity. Salmon smolts lost up to 20% of carcass tissue Se during the 30 h barge confinement. Selenium was analysed by analytical polarography. Samples collected after two barging episodes showed Se loss and concomitant elevated liver GTPX activity after the transport. Tissue Se loss may be useful to measure stress in fish, and increasing tissue Se in hatchery salmon smolts prior to release and transport may be warranted.     

Sporadic neoplasms of farmed chinook salmon,Oncorhynchus tshawytscha (Walbaum), from New Zealand

Eight separate neoplasms with five distinct morphologies are described in the present report. The spontaneous neoplasms were identified in farmed chinook salmon, Oncorhynchus tshawytscha (Walbaum), during processing. The masses were examined histologically and were classified as teratoma, rhabdosarcoma, biliary and renal cystadenomas, renal carcinoma and three leiomyomas. This represents one neoplasm detected for every 125000 fish processed during the sampling period.     

Landscape‐level constraints on recruitment of chinook salmon (Oncorhynchus tshawytscha) in the Columbia River basin,USA

• 1. The decline of salmonid populations in the Pacific Northwest has been well‐documented. It is unclear, however, which threats to salmonid persistence are the most serious, and how best to prioritize recovery efforts intended to ameliorate these threats.
• 2. It has been argued previously that one possible cause of salmon endangerment is degradation of spawning grounds. In order to explore this hypothesis, this study examines the relationships between chinook salmon (Oncorhynchus tshawytscha) productivity and landscape‐level characteristics of spawning grounds in the interior Columbia River Basin.
• 3. Population productivity is expressed as the mean and maximum recruitment rates for different stocks, measured from 1980 to 1990; habitat conditions are calculated using sub‐watershed scale data on land cover, land use, water quality and watershed hydrology.
• 4. Significant linear regression results were obtained for three environmental variables: percentage of land classified as urban, proportion of stream length failing to meet water quality standards, and an index of the ability of streams to recover from sediment flow events. A multiple regression with all three variables accounts for over 60% of the variation in mean salmon recruitment.
• 5. It further appears that these landscape attributes may limit the maximum recruitment rates of salmon, with a magnitude of difference in productivity large enough to be relevant to recovery planners. Additional study will be necessary to identify cause‐and‐effect linkages between habitat quality and salmon recruitment success, and to determine the ultimate impact of changes in recruitment rates on short‐ and long‐term salmon population trajectories.

Copyright © 2002 John Wiley & Sons, Ltd.     

Experimental production of gastric dilation and its association with osmoregulatory stress and biogenic amines in chinook salmon, Oncorhynchus tshawytscha (Walbaum)

Chinook salmon smolt in fresh water fed a commercial diet known to produce minimal gastric dilation and air sacculitis (GDAS) were randomly assigned to four experimental tanks with flow-through sea water. All four groups were acclimatized to sea water for 3 weeks and fed a diet of minced fresh seafood. After 3 weeks the groups were fed either; seafood as before, a different commercial pelleted diet associated with the development of GDAS on farms, or either diet supplemented with 500 mg L(-1) putrescine, 300 mg L(-1) cadaverine and 250 mg L(-1) tyramine. Gastric dilation was produced in fish fed the commercial diet for 1 month but not by feeding a diet of minced seafood. The addition of putrescine, cadaverine and tyramine to either diet had no significant effect on the development of gastric dilation. Fish fed the commercial diet had significantly (P < 0.0001) wider weight-adjusted stomach widths, less prominent longitudinal stomach folds (P < 0.0001) and lower (P < 0.0001) stomach-width ratios than fish fed the fresh seafood diet. There was no significant difference in serum osmolality or sodium concentration between fish from groups with or without gastric dilation or fed biogenic amines.     

Predation on Pacific herring (Clupea pallasi) spawn by birds in Prince William Sound,Alaska

We examined bird diets in areas with Pacific herring (Clupea pallasi) spawn at northern Montague Island in Prince William Sound, Alaska. Diets of the five most abundant bird species consisted primarily of herring spawn. Using a bioenergetics model, we estimated that in spring 1994 the five‐bird species ate 857.1 metric tons (mt), representing 31% of the estimated spawn deposition. The two most numerous consumers, glaucous‐winged gull (Larus glaucescens) and mew gull (Larus canus) consumed 26% and 3%, respectively, of the estimated spawn deposition. Surf scoters (Melanitta perspicillata), surfbirds (Aphriza virgata), and black turnstone (Arenaria melanocephala) together consumed 2% of the spawn deposition. In years with low spawn biomass, such as 1994, the number of herring larvae produced could be significantly affected by normal rates of avian predation. The high consumption by gulls, shorebirds, and surf scoters underscores the importance of herring spawn in the annual cycle of these species and requires further investigation.     

Oxidative stress in juvenile chinook salmon, Oncorhynchus tshawytscha (Walbaum)

Juvenile chinook salmon, Oncorhynchus tshawytscha (Walbaum), were held in 8–11°C freshwater, starved for 3 days and subjected to a low‐water stressor to determine the relationship between the general stress response and oxidative stress. Lipid peroxidation (LPO) levels (lipid hydroperoxides) were measured in kidney, liver and brain samples taken at the beginning of the experiment (0‐h unstressed controls) and at 6, 24 and 48 h after application of a continuous low‐water stressor. Tissue samples were also taken at 48 h from fish that had not been exposed to the stressor (48‐h unstressed controls). Exposure to the low‐water stressor affected LPO in kidney and brain tissues. In kidney, LPO decreased 6 h after imposition of the stressor; similar but less pronounced decreases also occurred in the liver and brain. At 48 h, LPO increased (in comparison with 6‐h stressed tissues) in the kidney and brain. In comparison with 48‐h unstressed controls, LPO levels were higher in the kidney and brain of stressed fish. Although preliminary, results suggest that stress can cause oxidative tissue damage in juvenile chinook salmon. Measures of oxidative stress have shown similar responses to stress in mammals; however, further research is needed to determine the extent of the stress–oxidative stress relationship and the underlying physiological mechanisms in fish.     

Annual variations in the diet of juvenile chinook salmon (Oncorhynchus tshawytscha) in the Waitaki River and the demonstration channels, 1982–1986

The numbers of particular prey in stomach samples of juvenile chinook salmon varied between sites, months and years in two controlled flow demonstration channel sites and the mainstem lower Waitaki River. During 4 growing seasons, 1982–1986, Deleatidium, Aoteapsyche, Hydroptilidae, Elmidae, Chironomidae and Amphipoda were important components of the diet. Salmon also ate a variety of other items of aquatic and terrestrial origin. Diets were quite similar and tended to change in the same way in all sites simultaneously, perhaps in response to discharge. Smaller prey (Chironomidae, Hydroptilidae and early instar Aoteapsyche) were more numerous in stomach samples in seasons of lower, more stable, discharge. Fewer but larger prey were consumed during high flows. The salmon sampled in March 1986 originated from the high egg deposition of 1985 and grew during a season of low discharge. They were exceptionally small and their diet consisted of large numbers of small prey. There was no evidence of progressive annual changes in the habitat or the diet of salmon in the demonstration channels. However, it would be prudent to arrange for flow fluctuations that would be sufficient to flush finer substrate sediments in a controlled flow residual river, thus maintaining the diversity of prey for juvenile salmon.     

Diel distribution,behaviour and consumption of juvenile Chinook salmon (Oncorhynchus tshawytscha) in a Wilderness stream

Abstract – Understanding population regulation in juvenile salmonids requires distinguishing the effects of intrinsic (size, behaviour) and extrinsic (food, competition) factors. To examine the relative influence of these variables on juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Salmon River drainage (ID, USA), we examined diel differences in foraging microhabitats, behaviour and consumption in two areas with consistent differences in parr‐to‐smolt survival. In lower Big Creek (LBC, high‐survival area) and upper Big Creek (UBC, low‐survival area), we observed fish by snorkelling, recording length, behaviour (foraging rate and aggression) and physical (depth, velocity, cover, temperature) and biotic (density, size and species of neighbouring fish) microhabitat features. Stomach contents were extracted to estimate consumption. Depth and temperature were greater in LBC, where Chinook salmon were significantly larger and present at lower densities. Fish in LBC exhibited higher foraging activity during the day than night, but there were no size differences between day and night foragers. In UBC, a higher density area, foraging behaviour did not change between day and night, although the smallest size classes did not forage nocturnally. Regression models that integrated physical and biotic variables suggested that physical factors influenced foraging in both areas, but competition also affected foraging in UBC. Our results demonstrate that fish from low‐ and high‐survival populations in Big Creek are exposed to different physical and biological influences during their first growth season, which are reflected in different diel foraging behaviours.     

Seasonal growth and diet of juvenile chinook salmon (Oncorhynchus tshawytscha) in demonstration channels and the main channel of the Waitaki River, New Zealand, 1982–1983

Abstract– Juvenile chinook salmon in the Waitaki River, New Zealand and demonstration channels, living at about 16°C, increased in length by 0.32 mm day⁻¹ between 4 November and 4 March. They gained weight quickly, accumulated large visceral fat deposits and had high conditions factors. At 1600 h, stomachs averaged half full. The number of prey tended to decline as the fish grew and consumed larger items. Initially the diet was based mainly on chironomid larvae, but by December it included a diversity of prey in more equal proportions. These included Deleatidium in the Waitaki; amphipods in the demonstration channels; various trichopterans, hemipterans, elmid beetles, zooplankton. terrestrial dipterans and a variety of other prey. There were significant differences between sites in numbers of prey consumed and these probably reflected differences in the benthos. Diets in the Waitaki differ from those in the Rakaia River and the food of juvenile salmon appears closely linked to the availability of a diverse range of possible prey.     

Evaluation of an experimental Aeromonas salmonicida epidemic in chinook salmon, Oncorhynchus tshawytscha (Walbaum)

To determine the dynamics of the transmission of Aeromonas salmonicida ssp. salmonicida infection, chinook salmon, Oncorhynchus tshawytscha, were exposed to bacteria by cohabitation. The latent period (time between exposure and infectivity) was determined by exposing a group of chinook salmonid fingerlings to A. salmonicida by bath, then, at daily intervals, by holding five exposed (donor) fish with approximately 50 naive fish for 24 h. The latent period was 3 days post-infection and the time period between the initial exposure to bacteria and the beginning of bacterial shedding was 4.5 days for the same animals. The prevalence and intensity of infection in the donor fish, to which recipient fish were exposed, i.e. the level of exposure, was highly correlated with the development of disease in recipient (susceptible) chinook salmon (r2 = 0.57). An experiment was conducted to determine the daily progress of infection and development of a furunculosis epidemic among recipient fish by cohabiting a single exposed fish with 43 unexposed salmon. At daily intervals, all fish (in seven treatment tanks and one control tank daily) were sacrificed and tested for the presence of A. salmonicida in the kidney (n = 3520). Over 10 days, mean prevalence among recipient fish reached 75% and disease related mortality exceeded 50%. Bacterial concentrations in the water continued to increase over the duration of the experiment in concert with the number of infected animals present in the population.     

Gastric dilation and air sacculitis in Chinook salmon,Oncorhynchus tshawytscha (Walbaum); correlation of macroscopic and microscopic lesions,and relationship of the syndrome to glomerulonephritis and serum biochemistry

Macroscopic and microscopic assessment procedures were developed to evaluate the severity and enable diagnosis from histological samples, of gastric dilation and air sacculitis (GDAS) in Chinook salmon, Oncorhynchus tshawytscha. Stomachs and swim bladders were examined from young fish with experimentally induced GDAS and from larger fish with the syndrome held in commercial saltwater net‐pens. Fish fed a diet previously known to induce GDAS had significantly wider stomachs with decreased prominence of longitudinal stomach folds that contained larger amounts of fluid (P < 0.001), and thinner stomach walls with greater inter‐nerve distances (P < 0.001), than fish fed an alternative commercial diet not associated with the syndrome. These fish also had swim bladders that were more likely to be opaque and contain more fluid (P < 0.001). These observations correlated well with selected criteria for stomach tissue (P < 0.002) and swim bladder (P < 0.04) that could be evaluated microscopically. Four stomach measurements, primarily measurements of wall or partial wall thickness and inter‐nerve distances, were suitable for discriminating between affected and non‐affected fish. A stomach width ratio, that was independent of fish weight and highly correlated with macroscopic stomach measurements (P < 0.0001), was particularly useful; this ratio was derived from the distances between both the outer border of the muscularis mucosa and mesothelium of the serosal surface to the stratum compactum. Serum biochemistry parameters (osmolality, calcium and magnesium) did not differ between fish fed different diets, but serum creatinine concentration was correlated with the microscopic thickness of the muscularis externa of the stomach wall and the total stomach thickness (P < 0.001 and P < 0.003, respectively). A glomerulonephritis was also noted in these fish. The severity of the lesion was not significantly related to GDAS nor to any serum biochemistry parameter assayed however.     

The use of a real-time PCR primer/probe set to observe infectivity of Yersinia ruckeri in Chinook salmon, Oncorhynchus tshawytscha (Walbaum), and steelhead trout, Oncorhynchus mykiss (Walbaum)

Yersinia ruckeri is the causative agent of enteric redmouth disease (ERM), a common pathogen affecting aquaculture facilities and implicated in large losses of cultured fish. Fisheries scientists continue to gain a greater understanding of the disease and the pathogen by investigating methods of identification and pre- and post-infection treatment. In this study, a real-time PCR probe set for Y. ruckeri was developed to detect daily changes in the bacterial load during pathogen challenges. Two species of fish, Chinook salmon, Oncorhynchus tshawytscha, and steelhead trout, Oncorhynchus mykiss, were exposed to two strains of Y. ruckeri (Hag and SC) during bath challenges. A subset of fish was killed daily for 14 days, and the kidney tissue was biopsied to enumerate copies of pathogen DNA per gram of tissue. While Chinook exposed to either the Hag or SC strains exhibited similar pathogen loads, those exposed to the Hag strain displayed higher mortality (～66%) than fish exposed to the SC strain (～24% mortality). Steelhead exposed to the Hag strain exhibited a greater pathogen load and higher mortality (～42%) than those exposed to the SC strain (<1% mortality). Steelhead challenged with either strain showed lower pathogen loads than Chinook. The study illustrates the efficacy of the probe set to enumerate Y. ruckeri bacterial growth in the kidneys of fish. Also, strains of Y. ruckeri display species-specific growth patterns that result in differential mortality and pathogen load.     

Evidence for depressed growth of juvenile Pacific salmon (Oncorhynchus) in Johnstone and Queen Charlotte Straits,British Columbia

Juvenile salmon traveling northwestward to the Pacific Ocean from the Strait of Georgia migrate through and take residence in both Johnstone and Queen Charlotte Straits. Johnstone Strait is a narrow and deep passage that is tidally mixed daily, resulting in a nearly isothermal water column, surface to the bottom (approximately 250 m). The trophic gauntlet hypothesis (McKinnell, Curchitser, Groot, Kaeriyama, & Trudel, 2014 ) suggests that Johnstone Strait provides a poor growth environment for fish required to transit this area during their migration, due to the oceanographic conditions found there. Using insulin‐like growth factor‐1 (IGF1), a hormone used to assess short‐term growth (within 5–7 days) in fishes, growth was measured in individual juvenile salmon from five species in the Northern Strait of Georgia, Johnstone Strait, Queen Charlotte Strait, and Queen Charlotte Sound in the summer of 2012, 2013, and 2014. All five juvenile salmon species had significantly lower IGF1 concentration in both Johnstone and Queen Charlotte Straits as compared to the Northern Strait of Georgia. These results are consistent with some aspects of the tropic gauntlet hypothesis as growth of juvenile salmon in both Johnstone and Queen Charlotte Straits were significantly lower than found in the Northern Strait of Georgia across all salmon species and all years. In addition, these results demonstrate the utility of growth indices for assessing the effects of environmental variation on juvenile salmon in the presence of a strong ecological driver.     

Evaluation of four methods to establish asymptomatic carriers of Aeromonas salmonicida in juvenile spring chinook salmon, Oncorhynchus tshawytscha (Walbaum)

Abstract. This study evaluated four methods to establish asymptomatic carriers of Aeromonas salmonicida. Exposure of chinook salmon, Oncorhynchus tshawytscha (Walbaum), to A. salmonicida by gastric intubation resulted in a carrier prevalence of 65%. This prevalence was significantly higher than prevalences of 40, 20 and 10% after exposure respectively to broth culture bath, ingestion of broth coated feed, and exposure to intraperitoneally infected fish.     

Ecosystem controls of juvenile pink salmon (Onchorynchus gorbuscha) and Pacific herring (Clupea pallasi) populations in Prince William Sound,Alaska

Five years of field, laboratory, and numerical modelling studies demonstrated ecosystem‐level mechanisms influencing the mortality of juvenile pink salmon and Pacific herring. Both species are prey for other fishes, seabirds, and marine mammals in Prince William Sound. We identified critical time‐space linkages between the juvenile stages of pink salmon and herring rearing in shallow‐water nursery areas and seasonally varying ocean state, the availability of appropriate zooplankton forage, and the kinds and numbers of predators. These relationships defined unique habitat dependencies for juveniles whose survivals were strongly linked to growth rates, energy reserves, and seasonal trophic sheltering from predators. We found that juvenile herring were subject to substantial starvation losses during a winter period of plankton diminishment, and that predation on juvenile pink salmon was closely linked to the availability of alternative prey for fish and bird predators. Our collaborative study further revealed that juvenile pink salmon and age‐0 herring exploit very different portions of the annual production cycle. Juvenile pink salmon targeted the cool‐water, early spring plankton bloom dominated by diatoms and large calanoid copepods, whereas young‐of‐the‐year juvenile herring were dependent on warmer conditions occurring later in the postbloom summer and fall when zooplankton was composed of smaller calanoids and a diversity of other taxa. The synopsis of our studies presented in this volume speaks to contemporary issues facing investigators of fish ecosystems, including juvenile fishes, and offers new insight into problems of bottom‐up and top‐down control. In aggregate, our results point to the importance of seeking mechanistic rather than correlative understandings of complex natural systems.     

An investigation of the biological basis of recruitment,growth and adult survival rate variability of Pacific herring (Clupea pallasi) from British Columbia: a synthesis

I explored the biological basis of variation in recruitment (age 3 abundance), growth and age‐specific adult survival rate for the major populations [West Coast Vancouver Island (WCVI), Strait of Georgia, Central Coast, North Coast and Haida Gwaii] of Pacific herring (Clupea pallasi) that inhabit British Columbian waters. The analyses were based on a synthesis of time series of empirical observations of herring population characteristics (egg deposition, age‐specific abundance and size) and prey, competitor and predator biomass/abundance. Recruitment was not correlated among populations. Recruitment variability was explained for WCVI herring only, as a consequence of prey (the euphausiid Thysanoessa spinifera) biomass during August in each of the first 3 years of life, and the biomass of piscivorous Pacific hake (Merluccius productus) during the first year of life. Recruit mass and adult mass‐at‐age were correlated among populations and over ages within populations. Recruit mass was affected by T. spinifera biomass in August of the first and third years of life. Adult mass‐at‐age variability was determined mainly by size at the beginning of the growth season, but also by T. spinifera biomass in August. Age‐specific adult survival rates were not correlated among the five populations. Survival rates decreased with age; there were additional population‐specific effects of somatic mass and T. spinifera biomass in August. The analyses were repeated using physical oceanographic explanatory variables. Only recruit mass variation was explained significantly by physical oceanographic variables, and the biological‐based explanation of recruit mass variability accounted for more of the variation.