Occurrence of potato wart disease (Synchytrium endobioticum) in Bulgaria: identification of pathotype(s) present

Potato wart disease caused by Synchytrium endobioticum was detected for the first time in Bulgaria in 2004. Laboratory tests, pot tests and field tests were carried out to determine which pathotype is present, specifically in Prodanovtsi near the town of Samokov. In addition, potato cultivars were tested for levels of resistance, in order to be used in buffer zones surrounding infested fields. Based on the results obtained in this study, it was found that most probably pathotype 8(F1) is present in Bulgaria. Most of the commercial potato cultivars tested were found to be susceptible to this pathotype. The local cultivars Koral and Bor were resistant, but these are not very important cultivars commercially. The potato cultivars Panda, Désirée and Amorosa were recommended for cultivation in the fields adjacent to infested plots.     

Interlaboratory tests for resistance to Synchytrium endobioticum in potato by the Glynne‐Lemmerzahl method

Synchytrium endobioticum is a major quarantine pathogen of potato causing potato wart disease. In Europe, the pathotypes 1(D1), 2(G1), 6(O1) and 18(T1) are the most widespread and occur locally in almost all countries. Resistance to this disease in potato cultivars is tested for in the majority of the EU countries by the Glynne‐Lemmerzahl method. This paper describes the results of testing two different protocols of this method in five laboratories of three different countries (Germany, Poland, and the Netherlands). The four pathotypes 1(D1), 2(G1), 6(O1) and 18(T1) were tested mainly on the cultivars described in the EPPO Standard PM 7/28 Synchytrium endobioticum. For pathotype 1(D1) and in most cases also for pathotype 18(T1), the results of the cultivars tested were identical to the rating in the EPPO Standard for both protocols. For pathotypes 2(G1) and 6(O1), the cultivars Désirée, Delcora and Miriam showed different results between laboratories as well as between the two protocols. In conclusion, further research is needed to develop one harmonised methodology for resistance testing of potato cultivars to the pathotypes 2(G1), 6(O1) and 18(T1) and to develop a new differential set of potato cultivars for the identification of pathotypes of S. endobioticum.     

History of potato wart disease in Europe – a proposal for harmonisation in defining pathotypes

Potato wart disease, caused by the chytridiomycete Synchytrium endobioticum, was first introduced into Europe in the late 19th century. It spread quickly, and today is reported in 15 European countries. Initially, only one pathotype was found, and the disease was efficiently controlled using resistant cultivars. In 1941, however, formerly resistant cultivars showed wart formation in the field simultaneously in Germany and South Bohemia (Czech Republic), indicating the occurrence of new pathotypes. New pathotypes have since been reported from Germany, The Netherlands, Czech Republic, Ukraine and Canada. Today the pathogen is present in The Netherlands (only in fields for ware and starch potatoes) but restricted to two demarcated areas and subject to official control. Outside these areas, the pathogen is absent. For pathotyping, different countries have used different sets of differential cultivars, and the usual system of numerical coding of pathotypes has not been consistently followed. In this review we propose a new standardised code to be used for the 43 pathotypes currently known and described in Europe. The code is a combination of a numerical and letter code, combining the two terminologies used by former West and East Germany, respectively. We also plead for harmonisation in the choice of differential cultivars used for pathotype identification. The set of differentials described in the international standard for diagnosis of S. endobioticum issued by the European and Mediterranean Plant Protection Organisation (EPPO), should serve as a basis. Through close collaboration of European countries dealing with new pathotypes of potato wart disease, a final agreed upon set of differentials, combined with a set of reference isolates, should ultimately be established, allowing a clear distinction between the most important pathotypes occurring in Europe.     

Characterization of Verticillium dahliae Isolates from Potato on Hokkaido by Random Amplified Polymorphic DNA (RAPD) and REP-PCR Analyses

Verticillium dahliae isolates from potato on the island of Hokkaido (potato isolates) and those belonging to pathotypes A (eggplant pathotype), B (tomato pathotype) and C (sweet pepper pathotype) were divided into three distinct groups by RAPD and REP-PCR. The three DNA groups I, II, III consisted of pathotypes A and C, pathotype B and potato isolates, respectively. The potato isolates were assigned to pathotype A on the basis of pathogenicity. Another set of potato isolates was further collected from eight potato cropping regions on Hokkaido to further examine the relationships among them in detail. Only one of these isolates was identified as DNA group II, but all the others were classified as DNA group III. Isolates from daikon, eggplant, and melon on Hokkaido also belonged to DNA group III. These results suggest that V. dahliae isolates from Hokkaido are unique at the DNA level and different from other pathotype A isolates in Japan. Received 28 February 2000/ Accepted in revised form 6 November 2000     

Testing for wart resistance in Ukraine1

The development of potato wart testing at the Ukrainian Plant Quarantine Research Institute is reviewed from the first appearance of wart disease in the 1930s, through the period of breeding of cultivars with resistance to pathotype 1, to the detection of new aggressive pathotypes requiring further tests for multiple wart resistance, and finally to the operation of the Station in independent Ukraine. Wart testing in Ukraine involves two phases, preliminary laboratory testing (by standard methods) and official testing of cultivars in the field. The regulatory basis of wart testing in Ukraine is outlined. This includes testing of Ukrainian-bred material and of material introduced, for research and breeding or for production, from other countries. The possibilities for breeding cultivars with multiple wart resistance are assessed.     

The 2019 Potato Wart Disease workshop: shared needs and future research directions

Potato wart disease is caused by the fungus Synchytrium endobioticum. A workshop on this disease was held in June 2019 at the Dutch National Plant Protection Organization (NPPO-NL) in Wageningen, the Netherlands. Over 60 participants from 20 countries and 36 organizations came together to share their knowledge via presentations and posters, to strengthen professional networks, and to identify shared needs and future directions for S. endobioticum research. The three major topics of the workshop were disease occurrence and management, understanding the pathogen, and host breeding and resistance. Many aspects of this disease were discussed and summarized in a shared statement. Future directions identified were (1) research initiatives are currently being initiated to develop standardized molecular viability tests and a molecular pathotyping test, (2) coordination is needed to come up with better standardization of the pathotyping bioassays and the set of differential cultivars described in EPPO PM 7/28 needs to be better available for testing, and (3) stacking of resistance genes is strongly recommended but resistance breeding alone is not enough and should be combined with other management strategies to contain potato wart disease. Furthermore, the attendees remarked that organizing a workshop every 2 or 3 years would be of great benefit to the potato wart disease research community.     

Potato Wart in the Federal Republic of Germany

A survey shows the present situation of the occurrence of potato wart (Synchytrium endobioticum) in the Federal Republic of Germany. By 1960 five different pathotypes (races) could be detected. Only 1 % of all foci identified after the Second World War belonged to the old pathotype 1 (← common race →). Questions of determination and emergence of new pathotypes as well as those of official restrictions on cultivar release are discussed.     

Identification of Pathotypes of the Potato Cyst Nematode1

Since the discovery of pathotypes of the potato cyst nematode (Heterodera rostochiensis Wollenweber, 1923), surveys on the distribution of these pathotypes have been carried out in different European countries. Test varieties of potato were selected according to findings resulting in the present situation of varying distinctive host-plants and of diverging programs for breeding potatoes resistant to the potato cyst nematode. With respect to rational selection and use of resistant potato varieties, there is a great need for standardization in pathotype identification (nomenclature), maintenance and supply of appropriate genotypes of Solanum species and methods for testing resistance in new potato varieties. Anticipating a cross-experiment with pathotypes and test varieties from Great Britain, the Federal Republic of Germany and the Netherlands in 1974, a preliminary test with all recognized or presumed pathotypes from these countries, but with only part of the potential differential host-plants was carried out by the Plant Protection Service at Wageningen. The results of this experiment are discussed.     

Pathotypes of Synchytrium endobioticum in Germany

Results are given of a survey on the occurrence of pathotypes (races) of Synchytrium endobioticum (potato wart) in both parts of re-unified Germany. An assortment of six differential cultivars appears to be sufficient to distinguish between the seven presently important German wart pathotypes. A total of ten pathotypes was recorded. Two West and two East German pathotypes seem to be identical, based on the results obtained with presently available cultivars. In contrast to pathotype 1 (common race) which prior to 1945 was distributed over the whole German territory, the 'new' pathotypes seem to prefer the central and south German mountain areas.     

Comparative Study of Genetic Diversity and Pathogenicity Among Populations of Verticillium Dahliae from Cotton in Spain and Israel

Genetic diversity and phenotypic diversity in Verticillium dahliae populations on cotton were studied among 62 isolates from Spain and 49 isolates from Israel, using vegetative compatibility grouping (VCG), virulence and molecular assays. In Spain, defoliating V. dahliae isolates (D pathotype) belong to VCG1, and non-defoliating isolates (ND) belong to VCG2A (often associated with tomato) and VCG4B (often associated with potato). The D pathotype was not identified in Israel. The ND pathotype in Israel is comprised of VCG2B and VCG4B. Isolates in VCG2B and VCG4B ranged in virulence from weakly virulent to highly virulent. The highly virulent isolates induced either partial defoliation or no defoliation. Virulence characteristics varied with inoculation method and cotton cultivar. Highly virulent isolates from Israel were as virulent as D isolates from Spain under conditions conducive to severe disease. The D pathotype is pathologically and genetically homogeneous, whereas the ND pathotype is heterogeneous with respect to virulence, VCG, and molecular markers based on single-primer RAPD and on PCR primer pairs.     

Population genetic analysis of Phytophthora infestans in northwestern China

Late blight caused by Phytophthora infestans is the most devastating disease of potato worldwide. To understand the P. infestans population structure and dynamics in northwestern China, 959 single‐lesion isolates were purified in three consecutive years (2009–2011) and were characterized for mating type, pathotype, mtDNA haplotype and molecular variation at eight SSR loci. The results showed that the distribution of mating types changed significantly over years, with self‐fertile isolates dominant in 2010 and 2011. SSR genotyping distinguished 959 isolates into 151 genotypes, and association analysis indicated that P. infestans populations in 2010 and 2011 were strictly asexual while in 2009 they showed signs of sexual reproduction. Population analysis showed that the majority of genetic variation was within P. infestans populations. Isolates sharing identical SSR genotypes were detected in distant regions, indicating that migration of P. infestans could have occurred between regions. Pathogenicity assays on a set of potato differential lines containing R1 to R11 resistance genes detected four pathotypes from 74 selected isolates, with the pathotype virulent against all 11 R genes being dominant. Three mtDNA haplotypes (Ia, IIa, IIb) were detected with Ia being dominant among 507 isolates examined. Phylogenetic analysis indicated that P. infestans populations in northwestern China are distant from European lineages including 13‐A2 (blue‐13) at the time of this survey. The results have implications for the trade of healthy seed tubers as a means of managing late blight.     

Effects of fungicide treatments of potato sprouts on assessment of resistance to Synchytrium endobioticum (Schilb.) Perc. using the Glynne–Lemmerzahl method

Five different active fungicides (pencycuron, mancozeb, copper oxychloride, azoxystrobin, and a mixture of carboxine and thiuram) were compared to protect potato sprouts from rotting when they are being tested using the Glynne–Lemmerzahl method. Sprouts were treated before or after inoculation with fresh warts of Synchytrium endobioticum. No symptoms of potato wart disease were observed on sprouts treated before inoculation. For sprouts treated after inoculation, symptoms of potato wart disease were recorded with all tested fungicides except azoxystrobin. In the case of pencycuron, symptoms were observed only when the concentration of fungicide was decreased to 20 mL L^?1. Among the active substances tested, the best results were obtained for copper oxychloride after inoculation using doses recommended by manufacturers.     

The Longevity of Resting Sporangia of Synchytrium endobioticum (Schilb.) Perc. in Soil1)

Resting sporangia of the potato wart disease pathogen Synchytrium endobioticum (Schilb.) Perc. which persist in soil can be extracted from soil by a wet-sieving and chloroform centrifugation method and counted. Soils from the sites of old wart outbreaks have been checked for resting sporangia. Sampling procedures, patterns and errors are being assessed.     

Protection of potatoes against pests in Ukraine1

Potato production in Ukraine is now mainly in the private sector, and the phytosanitary state of potato crops leaves much to be desired. Control of Leptinotarsa decemlineata is generally well managed, but potato late blight (Phytophthora infestons) is out of control. Potato wart disease continues to cause problems in areas where it occurs because of the unavailability or unacceptability of resistant cultivars. Potato viruses and the losses they cause are little studied or taken into account. Other fungal, bacterial and insect pests are causing increasing problems in the field and in store. Integrated pest management systems are proposed by scientific institutions, including adequate forecasting of potato blight and use of certified seed potatoes of cultivars resistant to wart and cyst nematodes, but these systems do not adequately reach private growers. The range of plant protection products authorized for sale to the general public is very limited, and this is a serious obstacle to adequate plant protection in potato.     

Host specificity,but not high-temperature tolerance,is associated with recent outbreaks of <Emphasis Type="Italic">Verticillium dahliae</Emphasis> in chrysanthemum in the Netherlands

Two hypotheses which might explain a recent increase in the incidence of verticillium wilt of chrysanthemums in glasshouses in the Netherlands were investigated, viz whether selection for increased resistance to elevated temperatures has occurred due to frequent steaming of soils in the glasshouses, or whether the strains of Verticillium dahliae occurring in chrysanthemum glasshouses are particularly virulent towards this host. Following artificial inoculation, five isolates of V. dahliae from chrysanthemum were pathogenic on chrysanthemum but five isolates from potato were non-pathogenic for this host. When inoculated onto potato plants, all isolates caused early senescence with no significant difference between the two groups of isolates. In amplified fragment length polymorphism analysis, the potato isolates formed a cluster distinct from all other isolates. As a group the chrysanthemum isolates were no more diverse than the potato isolates but did not form a cluster distinct from 12 other isolates tested. This suggests that high pathogenicity to chrysanthemum has developed on several occasions but that the group of potato isolates were possibly monophyletic. Microsclerotia produced in vitro from the chrysanthemum isolates had significantly lower average lethal temperature tolerance than those from the five potato isolates suggesting that being able to resist the effects of soil sterilisation by steam is not a factor in wilt of chrysanthemums in the Netherlands.     

Genotypic and phenotypic characterization of Phytophthora infestans in South Korea during 2009–2016 reveals clonal reproduction and absence of EU_13_A2 genotype

In order to better understand the Phytophthora infestans population structure in South Korea, 172 isolates were collected between 2009 and 2016 from four major potato cultivation areas. Fungicide (metalaxyl and dimethomorph) response, mating type, and microsatellite (SSR) genetic fingerprints were analysed to characterize these isolates. Ten isolates collected in Gyeongnam Province, which specializes in protected winter cultivation in polytunnels, were A2 mating type. All other isolates were A1 mating type. Overall, 42% of the isolates were resistant to metalaxyl, and 43% were sensitive. All isolates were sensitive to dimethomorph. From the SSR fingerprints, 45 distinct genotypes were identified, which could be clustered into four clonal lineages: KR_1_A1, KR_2_A2, SIB-1, and US-11. KR_1_A1 was the predominant P. infestans genotype in South Korea. KR_2_A2 was only found in Gyeongnam Province; all isolates were A2 mating type and resistant to metalaxyl. SIB-1 was dominant until 2013 but its frequency has gradually decreased in more recent years. US-11 was first found in 2014, after which its frequency has increased to become codominant with KR_1_A1. The calculated standardized index of association (I_A) suggests that the South Korean P. infestans population is undergoing clonal reproduction. When compared with populations of P. infestans from the Netherlands, it has less genetic diversity and the dominant Netherlands P. infestans genotype, EU_13_A2 (Blue_13), was not found in South Korea. Such monitoring of the pathogen population contributes to a more efficient integrated pest management-based control strategy for potato late blight control in South Korea.     

Dominance of a single clonal lineage in the Phytophthora infestans population from northern Shaanxi,China revealed by genetic and phenotypic diversity analysis

Late blight caused by Phytophthora infestans is the most serious disease of potato worldwide. To understand the P. infestans population structure in northern Shaanxi, an emerging potato production region in China, 125 single‐lesion isolates were randomly collected from farmers' fields in 2009 and characterized phenotypically and genotypically. A mating type assay showed that 94 isolates were A1 mating type. Virulence determination of selected isolates on a set of differential potato lines containing R1 to R11, respectively, showed the presence of two pathotypes, of which the pathotype lacking avirulence genes Avr3, Avr4 and Avr10 was dominant. Isolates lacking all avirulence factors Avr1 to Avr11 were detected but at lower frequency (13·6%). Analysis for mtDNA haplotype showed all 61 examined isolates were IIa. A total of seven multilocus genotypes were distinguished among 125 isolates, as determined with seven polymorphic microsatellite markers. The genotype SG‐1 was dominant in the population with a frequency of 75·2% and was present throughout the region. Analysis of the phenotypic and genotypic structures of P. infestans populations indicated strict clonal reproduction of the pathogen and suggested that sexual reproduction probably does not occur. Potential implications for disease management are discussed.     

The effects of co‐infection by different Potato virus Y (PVY) isolates on virus concentration in solanaceous hosts and efficiency of transmission

The influence of co‐infection on concentration and accumulation of genetically different isolates of Potato virus Y (PVY) in potato and tobacco plants and the efficiency of transmission by Myzus persicae of PVY isolates from doubly versus singly infected plants were evaluated. The vector ability to simultaneously transmit two virus isolates was examined. Eight PVY isolates represented three strain groups: PVY^O (pathotype and serotype O), PVY^NW (pathotype N and serotype O), and PVY^NTN (pathotype and serotype N). Different diagnostic methods, including DAS‐ELISA, multiplex RT‐PCR, aphid transmission tests and bioassays, were applied to detect the presence of PVY isolates in source and assay plants. Significant reductions in concentrations of certain PVY isolates during co‐infection with other isolates were found both in potato and tobacco plants. The observed effects were both isolate‐ and host‐dependent in form. The highest rates of virus transmission by single aphids were recorded with PVY^NTN isolates, and the lowest ones with PVY^O isolates. Individual aphids of M. persicae were able to simultaneously transmit two PVY isolates. The frequency of transmission was generally low, but it reached as high as 20% for one of the isolate combinations. The findings presented in the work provide proof for antagonistic within‐plant interactions between isolates of PVY, with some implications of these interactions for virus transmission by aphid vectors. Consequently, this research contributes to a better understanding of the epidemiology of the disease caused by PVY.     

Studies on the origin,spread, and evolution of an important group ofPuccinia recondita f. sp.tritici pathotypes in Australasia

Wheat brown rust pathotype (pt) 104-2,3,(6),(7), 11 was first detected in Australasia in Victoria during 1984. Although it appeared similar to a pre-existing pathotype, 104-2,3,6,(7), detailed greenhouse test revealed nine pathogenic differences between the two rusts. Six differences involved contrasting virulence/avirulence for the resistance genes/specificitiesLr12, Lr27+Lr31 andLr16, and three uncharacterised genes, present in the wheat cultivars Gaza and Harrier, and in triticale cultivar Lasko. Differences in partial virulence between the pathotypes were found for the genesLr2a, Lr13 andLr26. A comparison of the phenotypes for 13 isozyme systems in the two pathotypes revealed two differences, including aPgm2 allele in pt 104-2,3,(6),(7),11 not found in other contemporary AustralasianPuccinia recondita f. sp.tritici pathotypes. On the basis of these differences, it was concluded that pt 104-2,3,(6),(7),11 was introduced into the Australasian region before or during 1984.Seven variants of pt 104-2,3,(6),(7),11, that differed by single virulences, were detected during 1984–1992. Pt 104-2,3,(6),(7),11 and a derivative pathotype with virulence forLr20 underwent rapid increases in frequency, largely displacing pathotypes which predominated before 1984. Although first detected in eastern Australia, both pathotypes spread to New Zealand, and the derivative pathotype appeared in Western Australia. The rapid spread and increase of these pathotypes could not be explained by host selection. Pt 104-2,3,(6),(7),11 and derivatives may therefore be more aggressive than other contemporary Australasian pathotypes.Abbreviations NSW New South Wales - Prt Puccinia recondita f. sp.tritici - Qld Queensland - SA South Australia - WA Western Australia     

甘肃和内蒙古地区马铃薯晚疫病菌的致病型

利用来自国际马铃薯中心含有单显性抗性基因的11个鉴别寄主,采用离体叶片测定方法对2007—2008年采自甘肃和内蒙古地区的共91个致病疫霉马铃薯分离物的致病型进行了测定。结果显示：来自甘肃的65株菌中共有28个致病型,有3株可以克服11个抗性基因;总共有超过一半的菌株对抗性基因R7、R9、R11有毒性,而能克服抗性基因R1、R2、R8的菌株数最少。在来自内蒙古的26株菌中,共检测到24个致病型,有2株菌能克服11个抗性基因,共有84.6%的菌株可以对含有抗性基因R7的植株表现出毒性,而R1、R2、R8被克服比例最低。因此,研究结果表明,在这两个地区可优先考虑在菌株采集地种植和选育含有R1,R2和R8这3个抗性基因的马铃薯品种。