Species-specific effects of plants colonising cutover peatlands on patterns of carbon source utilisation by soil microorganisms

Root exudates and litter are the main sources of inputs of labile carbon into the microbial pool in successional ecosystems. Here we studied whether typical pioneer species (Eriophorum vaginatum, Eriophorum angustifolium and Calluna vulgaris) alter the functional response of the microbial community of a previously cutover peatland. Peat was sampled at three depths (0–5, 20–25 and 40–45 cm) from beneath these species and from bare soil areas. MicroResp analysis using ecologically relevant, radiolabelled, carbon sources showed significant separation in community level physiological profiles (CLPP) of soil microorganisms according to peat depth. This effect was also reflected in microbial biomass carbon, which also decreased with increasing depth. Furthermore, distinct differences in CLPP were observed between the three plant species and the bare soil in the absence of an effect on microbial biomass carbon or total soil carbon. The plant species effects were driven by differential utilisation of xylose, glutamic acid, lysine and phenylethylamine. The data suggest that ‘new’ carbon inputs from plants colonising abandoned cutover peatland may support communities of microorganisms that have functionally distinct roles in carbon turnover.     

Five years of simulated atmospheric nitrogen deposition have only subtle effects on the fate of newly synthesized carbon in Calluna vulgaris and Eriophorum vaginatum

To understand the implications of atmospheric nitrogen deposition on carbon turnover in peatlands, we conducted a ¹³C pulse labeling experiment on Calluna vulgaris and Eriophorum vaginatum already receiving long-term (5 years) amendments of 56 kg N ha⁻¹ y⁻¹ as ammonium or nitrate. We examined shoot tissue retention, net ecosystem respiration returns of the ¹³C pulse, and soil porewater DOC content under the two species. ¹³C fixation in Eriophorum leaves was enhanced with nitrogen addition and doubled with nitrate supply. This newly fixed C appeared to be relocated below-ground faster with nitrogen fertilization as respiration returns were unaffected by N inputs. By contrast, increases in ¹³C fixation were not observed in Calluna. Instead, net ecosystem respiration rates over Calluna increased with N fertilization. There was no significant label incorporation into DOC, suggesting a conservative strategy of peatland vegetation regarding allocation of C through root exudation. Greater concentrations of total DOC were identified with nitrate addition in Calluna. Given the long-term nature of the experiment and the high N inputs, the overall impacts of nitrogen amendments on the fate of recently synthesized C in Eriophorum and Calluna in this ombrotrophic peatland were surprisingly more moderate than originally hypothesized. This may be due to N being effectively retained within the bryophyte layer, thus limiting, and delaying the onset of, below-ground effects.     

Timing patterns of nitrogen application alter plant production and CO2 efflux in an alpine meadow on the Tibetan Plateau,China

Nitrogen (N) availability is an important factor that determines ecosystem productivity and respiration, especially in N-limited alpine ecosystems. However, the magnitude of this response depends on the timing and amounts of N input. Moreover, we have only a limited understanding of the potential effects of the timing of N fertilization on ecosystem carbon (C) and N processes, and activities of the soil microbes. A nitrogen fertilization experiment was conducted in an alpine meadow on the Tibetan Plateau to determine how plant productivity and ecosystem respiration (RE) respond to the timing and amount of N application. In this study, half of the N was added either in the early spring (ES), before the growing season, or in the late fall (LF), after the growing season. All treatments received the other half of the N in mid-July. Three N levels (10, 20, 40 kg N hm⁻² yr⁻¹) were used for each of two N treatments, with no N addition used as a control. Plant aboveground biomass, ecosystem respiration (RE) and soil respiration (RS) were measured for the 2011 and 2012 growing seasons. The LF treatment enhanced ecosystem CO₂ efflux compared with the ES treatment at high N addition levels, resulting from an increase of soil dissolved organic C (DOC) and soil microbial activity. The ES treatment resulted in increased plant aboveground biomass when compared with LF during both growing seasons, although this increase accounted for little variation in ecosystem and soil respiration. Overall, the ES treatment is likely to increase the ecosystem C pool, while the LF treatment could accelerate ecosystem C cycling, especially for the high N treatment. Our results suggest that supplying N during the early stage of the growing season benefits both forage production and soil C sequestration in this alpine ecosystem.     

Changes of microbial properties in (near-) rhizosphere soils after phytoextraction by Sedum alfredii H: A rhizobox approach with an artificial Cd-contaminated soil

The ultimate goal of soil remediation is to restore soil health. Soil microbial parameters are considered to be effective indicators of soil health. The aim of this study was to determine the effects of phytoextraction on microbial properties through the measurement of soil microbial biomass carbon, soil basal respiration and enzyme activities. For this purpose, a pre-stratified rhizobox experiment was conducted with the Cd hyperaccumulator Sedum alfredii H. for phytoextraction Cd from an artificial contaminated soil (15.81 mg kg⁻¹) under greenhouse conditions. The plant and soil samples were collected after growing the plant for three and six months with three replications. The results indicated that the ecotype of S. alfredii H. originating from an ancient silver mining site was a Cd-hyperaccumulator as it showed high tolerance to Cd stress, the shoot Cd concentration were as high as 922.6 mg kg⁻¹ and 581.9 mg kg⁻¹ at the two samplings, and it also showed high BF (58.4 and 36.8 after 3 and 6 months growth), and TF (5.8 and 5.1 after 3 and 6 months growth). The amounts of Cd accumulated in the shoots of S. alfredii reached to an average of 1206 μg plant⁻¹ after 6 months growth. Basal respiration, invertase and acid phosphatase activities of the rhizosphere soil separated by the shaking method were significantly higher (P < 0.01) than that of the near-rhizosphere soil and the unplanted soil after 3 months growth, so were microbial biomass carbon, urease, invertase and acid phosphatase activities of the rhizosphere soil after 6 months growth. Acid phosphatase activity of the 0–2 mm sub-layer rhizosphere soil collected by the pre-stratified method after 3 months growth was significantly higher (P < 0.05) than that of other sub-layer rhizosphere soils and bulk soil, and so were microbial biomass carbon, basal respiration, urease, invertase and acid phosphatase activities of the 0–2 mm sub-layer rhizosphere soil after 6 months growth. It was concluded that phytoextraction by S. alfredii could improve soil microbial properties, especially in rhizosphere, and this plant poses a great potential for the remediation of Cd contaminated soil.     

Partitioning soil surface CO2 efflux into autotrophic and heterotrophic components,using natural gradients in soil δ13C in an undisturbed savannah soil

We used natural gradients in soil and vegetation δ¹³C signatures in a savannah ecosystem in Texas to partition soil respiration into the autotrophic (Ra) and heterotrophic (Rh) components. We measured soil respiration along short transects from under clusters of C₃ trees into the C₄ dominated grassland. The site chosen for the study was experiencing a prolonged drought, so an irrigation treatment was applied at two positions of each transect. Soil surface CO₂ efflux was measured along transects and CO₂ collected for analysis of the δ¹³C signature in order to: (i) determine how soil respiration rates varied along transects and were affected by localised change in soil moisture and (ii) partition the soil surface CO₂ efflux into Ra and Rh, which required measurement of the δ¹³C signature of root- and soil-derived CO₂ for use in a mass balance model.The soil at the site was unusually dry, with mean volumetric soil water content of 8.2%. Soil respiration rates were fastest in the centre of the tree cluster (1.5 ± 0.18 μmol m^?2 s^?1; mean ± SE) and slowest at the cluster–grassland transition (0.6 ± 0.12 μmol m^?2 s^?1). Irrigation produced a 7–11 fold increase in the soil respiration rate. There were no significant differences (p > 0.5) between the δ¹³C signature of root biomass and respired CO₂, but differences (p < 0.01) were observed between the respired CO₂ and soil when sampled at the edge of the clusters and in the grassland. Therefore, end member values were measured by root and soil incubations, with times kept constant at 30 min for roots and 2 h for soils. The δ¹³C signature of the soil surface CO₂ efflux and the two end member values were used to calculate that, in the irrigated soils, Rh comprised 51 ± 13.5% of the soil surface CO₂ efflux at the mid canopy position and 57 ± 7.4% at the drip line. In non-irrigated soil it was not possible to partition soil respiration, because the δ¹³C signature of the soil surface CO₂ efflux was enriched compared to both the end member values. This was probably due to a combination of the very dry porous soils at our study site (which may have been particularly susceptible to ingress of atmospheric CO₂) and the very slow respiration rates of the non-irrigated soils.     

Experimental drought alters rates of soil respiration and methanogenesis but not carbon exchange in soil of a temperate fen

The impact of intensified drought and rewetting on C cycling in peatlands is debated. We conducted drying/rewetting (DW) experiments with intact monoliths of a temperate fen over a period of 10 months. One treatment with original vegetation (DW-V) and one defoliated treatment (DW-D) were rewetted after an experimental drought of 50 days; another treatment was kept permanently wet (W-V). Soil water content was determined by the TDR technique, C fluxes from chamber measurements and gas profiles in the soils, and respiration from mass balancing CO₂ and CH₄ fluxes in the peat using hourly to weekly data. Zones of high root associated respiration were determined from a ¹³C labeling experiment. Autotrophic respiration contributed from 55 to 65% to an average ecosystem respiration (ER) of 92 (DW-D), 211 (DW-V), and 267 mmol m^?2 d^?1 (W-V). Photosynthesis ranged from 0 (DW-D) to 450 mmol m^?2 d^?1 (W-V), and strongly declined for about 30 days after rewetting (DW-V), while ER remained constant during the drying and rewetting event. Drying raised air-filled porosity in the soil to 2–13%, temporarily increased respiration to estimated anaerobic and aerobic rates of up to 550 and 1000 nmol cm^?3 d^?1, and delayed methane production and emission by weeks to months. Root associated respiration was concentrated in the uppermost peat layer. In spite of clear relative changes in respiration during and after drought, the impact on carbon exchange with the atmosphere was small. We attribute this finding to the importance of respiration in the uppermost and soil layer, which remained moist and aerated, and the insensitivity of autotrophic respiration to drought. We expect a similar dynamics to occur in other temperate wetland soils in which soil respiration is concentrated near the peatland surface, such as rich minerotrophic fens.     

Effects of nonylphenols on soil microbial activity and water retention

The main aim of this study is to analyze the influence of 4-nonylphenol (NP) on soil water retention and biological activity. Two doses of 4-nonylphenol (25 and 50 mg kg⁻¹) were tested in a loam soil with and without peat amendment. In general, one week after the start of the experiment, the soil water content retained at −0.75 MPa of soil suction was 18% higher in the soil amended and its basal respiration (BR) was 15% higher than soil without peat. In contrast, the microbial activity indices (CM: coefficient of mineralization or BR:total organic carbon (TOC) ratio; Cmic:Corg: microbial biomass carbon (MBC):TOC ratio; qCO₂: metabolic quotient or BR:MBC ratio) were higher in the soil without peat, compared to the soil amended with peat. On the other hand, the addition of NP to soil was able to modify soil biological but not physical (water retention, desorption) properties. When soil was amended with peat, MBC was reduced one week after applying NP. In contrast, no effects of NP on MBC were observed in the soil without peat. BR was reduced by 16% one week after applying 50 mg kg⁻¹ of NP to soil with peat, and was increased by 46% one week after applying 25 mg kg⁻¹ of NP to soil without peat. The effects of NP on MBC and BR could be associated more with the adsorption of NP by soil organic matter, while changes in CM or Cmic:Corg ratio were more closely related to changes in soil water retention. The potential toxic effects of NP (high qCO₂ values) were only observed in the absence of peat amendments. Peat addition reduced NP toxic effects on microorganisms.     

The effect of EDDS chelate and inoculation with the arbuscular mycorrhizal fungus Glomus intraradices on the efficacy of lead phytoextraction by two tobacco clones

Two pot experiments were conducted to investigate the effect of inoculation with the arbuscular mycorrhizal (AM) fungus Glomus intraradices on Pb uptake by two clones of Nicotiana tabacum plants. Non-transgenic tobacco plants, variety Wisconsin 38, were compared in terms of Pb uptake with transgenic plants of the same variety with inserted gene coding for polyhistidine anchor in fusion with yeast metallothionein. Bioavailability of Pb in experimentally contaminated soil was enhanced by the application of a biodegradable chelate ethylenediaminedissuccinate (EDDS).EDDS addition (2.5 and 5.0 mmol kg⁻¹ substrate) increased Pb uptake from the substrate and enhanced Pb translocation from the roots to the shoots, with shoot Pb concentrations reaching up to 800 mg kg⁻¹ at the higher chelate dose. Application of a single dose of 5 mmol kg⁻¹ proved to be more efficient at increasing shoot Pb concentrations than two successive doses of 2.5 mmol kg⁻¹, in spite of a marked negative effect on plant growth and phytotoxicity symptoms. Pb amendment (1.4 g kg⁻¹ substrate) connected with either dose of EDDS decreased significantly plant biomass as well as reduced the development of AM fungi. AM inoculation promoted the growth of tobacco plants and partly alleviated the negative effect of Pb contamination, mainly in the case of root biomass.No consistent difference in Pb uptake was found between transgenic and non-transgenic tobacco plants. The effect of AM inoculation on Pb concentrations in plant biomass varied between experiments, with no effect observed in the first experiment and significantly higher root Pb concentrations and increased root–shoot ratio of Pb concentrations in the biomass of inoculated plants in the second experiment. Due to probable retention of Pb in fungal mycelium, the potential of AM for phytoremediation resides rather in Pb stabilisation than in phytoextraction.     

Turnover of low molecular weight dissolved organic C (DOC) and microbial C exhibit different temperature sensitivities in Arctic tundra soils

Polar ecosystems are currently experiencing some of the fastest rates of climate warming. An increase in soil temperature in High Arctic regions may stimulate soil permafrost melting and microbial activity, thereby accelerating losses of greenhouse gases. It is therefore important to understand the factors regulating the rates of C turnover in polar soils. Consequently, our aims were to: (1) assess the concentration of low molecular weight (MW) dissolved organic carbon (DOC) in soil, (2) to investigate the temperature-dependent turnover of specific low MW compounds, and (3) to analyse the influence of substrate concentration on C cycling. Microbial mineralisation of labile low MW DOC in two High Arctic tundra soils was investigated using soil solutions spiked with either ¹⁴C-labelled glucose or amino acids. Spiked solutions were added to the top- and sub-soil from two ecosystem types (lichen and Carex dominated tundra), maintained at three temperatures (4–20 °C), and their microbial mineralisation kinetics monitored. ¹⁴CO₂ evolution from the tundra soils in response to ¹⁴C-glucose and -amino acid addition could best be described by a double first order exponential kinetic equation with rate constants k₁ and k₂. Both forms of DOC had a short half-life (t_1/2) in the pool of microbial respiratory substrate (t_1/2 = 1.07 ± 0.10 h for glucose and 1.63 ± 0.14 h for amino acids; exponential coefficient k₁ = 0.93 ± 0.07 and 0.64 ± 0.06 h^?1 respectively) whilst the second phase of mineralisation, assumed to be C that had entered the microbial biomass, was much slower (average k₂ = 1.30 × 10^?3 ± 0.49 × 10^?4 h^?1). Temperature had little effect on the rate of mineralisation of ¹⁴C used directly as respiratory substrate. In contrast, the turnover rate of the ¹⁴C immobilized in the microbial biomass prior to mineralisation was temperature sensitive (k₂ values of 0.99 × 10^?3 h^?1 and 1.66 × 10^?3 h^?1 at 4 and 20 °C respectively). Concentration-dependent glucose and amino acid mineralisation kinetics of glucose and amino acids (0–10 mM) were best described using Michaelis–Menten kinetics; there was a low affinity for both C substrates by the microbial community (K_m = 4.07 ± 0.41 mM, V_max = 0.027 ± 0.005 mmol kg^?1 h^?1). In conclusion, our results suggest that in these C limiting environments the flux of labile, low MW DOC through the soil solution is extremely rapid and relatively insensitive to temperature. In contrast, the turnover of C incorporated into higher molecular weight microbial C pools appears to show greater temperature sensitivity.     

Interrelationships between microbial and soil properties in young volcanic ash soils of Nicaragua

The activity and biomass of soil microorganisms were measured in soils from 25 different arable sites in the Pacific region of Nicaragua with the objective of elucidating their interrelationship with soil textural and soil chemical properties. All soils developed from recent volcanic deposits but differ in their particle size distribution. Short-term phosphorus fixation capacity varied widely and was, on average, 11% of added P. In contrast, long-term P fixation capacity varied within a small range of around 55%. Mean basal respiration was 8.6 μg CO₂–C d⁻¹ g⁻¹ soil, average contents of biomass C, biomass P, and ergosterol as an indicator of fungal biomass were 116, 1.95, and 0.34 μg g⁻¹ soil, respectively. They were all, except biomass P, significantly lower in the sandy than in the loamy soils. The mean biomass C-to-soil C ratio was 0.69%, the mean metabolic quotient 95 mg CO₂–C d⁻¹ g⁻¹ biomass C, the mean ergosterol-to-biomass C ratio 0.31% and the mean biomass C-to-P ratio 107. The very low ergosterol-to-biomass C ratio indicates that fungi contribute only a relatively small percentage to the microbial biomass. The biomass C-to-P ratio exceeded considerably the soil C-to-total P ratio. Metabolic quotient qCO₂ and ergosterol-to-biomass C were both negatively correlated with biomass C-to-soil C ratio and clay content, indicating positive correlations between qCO₂ and ergosterol-to-biomass C ratio and between biomass C-to-soil C ratio and clay content. Key problems of soil fertility and soil quality in Nicaragua are low availability of soil organic matter and phosphorus to soil microorganisms, which are magnified by a low percentage of fungi, probably reducing the ability of soil to provide nutrients for plant growth.     

Microbial biomass in a semi arid soil of the central highlands of Mexico cultivated with maize or under natural vegetation

Microbial biomass (MB) is the key factor in nutrient dynamics in soil, but no information exists how clearing of vegetation to cultivate maize in the central highlands of Mexico might affect it. Soil MB was measured with the chloroform fumigation incubation (CFI) and fumigation extraction (CFE) techniques and the substrate-induced respiration (SIR) method in soil sampled under or outside the canopy of mesquite (Prosopis laevigata) and huisache (Acacia tortuoso), N₂ fixing shrubs, and from fields cultivated with maize. Microbial biomass C as measured with the CFI technique ranged from 122 mg C kg⁻¹ in agricultural soil to 373 mg C kg⁻¹ in soil sampled under mesquite shrubs. Microbial biomass N as measured with the CFI technique ranged from 11 mg N kg⁻¹ in agricultural soil to 116 mg N kg⁻¹ in soil sampled under mesquite shrub. The ratio of microbial biomass C as measured with CFI related to the ninhydrin-positive compounds (NPC) was 12.23 after 1 day and 8.43 after 10 days while the relationship with extractable C was 3.15 and 2.96, respectively. The metabolic quotient (qCO₂) decreased in the order OUTSIDE > MESQUITE > HUIZACHE > AGRICULTURE, and the microbial biomass:soil organic C ratio decreased in the order MESQUITE > HUIZACHE > OUTSIDE > AGRICULTURE using SIR to determine the microbial biomass. It was found that converting soil under natural vegetation to arable soil was not only detrimental for soil quality, but might be unsustainable as organic matter input is limited.     

Root-derived respiration and non-structural carbon of rice seedlings

Various methods have been suggested to separate root and microbial contributions to soil respiration. However, to date there is no ideal approach available to partition below-ground CO₂ fluxes in its components although the combination of traditional methods with approaches based on isotopes seems especially promising for the future improvement of estimates. Here we provide evidence for the applicability of a new approach based on the hypothesis that root-derived (rhizomicrobial) respiration, including root respiration and CO₂ derived from microbial activity in the immediate vicinity of the root, is proportional to non-structural carbon contents (sugars and organic acids) of plant tissues. We examined relationships between root-derived CO₂ and non-structural carbon of rice (Oryza sativa) seedlings using ¹⁴C pulse labelling techniques, which partitioned the ¹⁴C fixed by photosynthesis into root-derived ¹⁴CO₂, and ¹⁴C in sugars and organic acids of roots and shoots. After the ¹⁴C pulse ¹⁴C in both sugars and organic acids of plant tissues decreased steeply during the first 12 h, and then decreased at a lower rate during the remaining 60 h. Soil ¹⁴CO₂ efflux and soil CO₂ efflux strongly depended on ¹⁴C pools in non-structural carbon of the plant tissues. Based on the linear regression between root-derived respiration and total non-structural carbon (sugars and organic acids) of roots, non-rhizomicrobial respiration (SOM-derived) was estimated to be 0.25 mg C g⁻¹ root d.w. h⁻¹. Assuming the value was constant, root-derived respiration contributed 85–92% to bulk soil respiration.     

Effect of paclobutrazol on microbial biomass,respiration and cellulose decomposition in soil

Paclobutrazol is a plant growth regulator largely utilized in mango cultivation and usually applied directly to soil. The aim of this study was to examine the effect of paclobutrazol on soil microbial biomass, soil respiration and cellulose decomposition in Brazilian soils under laboratory conditions. Soil samples were collected from fields with and without a reported history of paclobutrazol application. A solution of paclobutrazol (8 mg of active ingredient kg^?1 of soil) was added to soils, which were then incubated at 28 °C for 30 days. Paclobutrazol decreased soil microbial biomass, soil respiration and cellulose decomposition in soil with and without a report of paclobutrazol application, while significant increase was observed in the respiratory quotient (qCO₂). Our results show that the soil microbiological attributes were negatively affected by paclobutrazol in short-term experiment.     

Effect of litter quality and soil fungi on macroaggregate dynamics and associated partitioning of litter carbon and nitrogen

We investigated the effect of plant residue decomposability and fungal biomass on the dynamics of macroaggregate (250–2000 μm) formation in a three months' incubation experiment and determined the distribution of residue-derived C and N in the microbial biomass and in aggregate size fractions (250–2000 μm, 53–250 μm and <53 μm) using ¹³C and ¹⁵N data. A silty loam soil (sieved <250 μm) was incubated with and without addition of ¹⁵N labelled maize leaves (C/N = 27.4) and roots (C/N = 86.4). Each treatment was carried out with and without fungicide application. The addition of maize residues enhanced soil respiration and microbial biomass C and N and resulted in increased macroaggregate formation with a higher and more rapid maximum macroaggregation in the soil amended with maize leaves than in that with addition of roots. Fungicide application led to a significant decline of microbial biomass C and mineralization of the added residues compared to untreated soils, which demonstrates a successful suppression of part of the active microbial biomass by the fungicide. However, this was not confirmed by a generally lower ergosterol concentration. Consequently, ergosterol was no reliable fungal biomarker in periods of rapid decline of the fungal biomass. A single addition of fungicide was insufficient for continued inhibition of the fungal biomass. Yet, a significant delay (28–42 days) in macroaggregation in fungicide treated compared to untreated samples highlighted the importance of the fungal biomass in macroaggregate formation. Macroaggregates were enriched in maize-derived ¹³C and ¹⁵N compared to microaggregates or the fraction < 53 μm. They turned over rapidly with decreasing substrate availability, which entailed a transfer of maize-derived C and N stored within macroaggregates during the first weeks of incubation to microaggregates with proceeding incubation time. Our results indicate that this transfer happened within macroaggregates, because no considerable amount of free particulate organic matter (POM) was released upon macroaggregate breakdown. We conclude that substrate decomposability and fungal activity are key factors determining extent and dynamics of macroaggregation during decomposition processes. Macroaggregate formation implied rapid incorporation and thereby short-term protection of maize-derived C and N. Moreover, macroaggregates allowed a transfer of maize-derived organic matter into microaggregates within macroaggregates, which prevented the release of significant amounts of free POM upon macroaggregate breakdown. Consequently, macroaggregates constitute to the transfer of recently added C into more stable soil organic matter fractions.     

Relationships between soil pH and microbial properties in a UK arable soil

Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO₃ concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R² = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R² = 0.80, p < 0.001), biomass ninhydrin-N (R² = 0.90, p < 0.001), organic C (R² = 0.83, p < 0.001) and total N (R² = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO₂ evolution increased as pH increased (R² = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO₂) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO₃) and biotic Co₂ will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.     

Formation and use of microbial residues after adding sugarcane sucrose to a heated soil devoid of soil organic matter

A 67-day incubation experiment was carried out with a soil initially devoid of any organic matter due to heating, which was amended with sugarcane sucrose (C₄-sucrose with a δ¹³C value of ?10.5‰), inorganic N and an inoculum for recolonisation and subsequently at day 33 with C₃-cellulose (δ¹³C value of ?23.4‰). In this soil, all organic matter is in the microbial biomass or in freshly formed residues, which makes it possible to analyse more clearly the role of microbial residues for decomposition of N-poor substrates. The average δ¹³C value over the whole incubation period was ?10.7‰ in soil total C in the treatments without C₃-cellulose addition. In the CO₂ evolved, the δ¹³C values decreased from ?13.4‰ to ?15.4‰ during incubation. In the microbial biomass, the δ¹³C values increased from ?11.5‰ to ?10.1‰ at days 33 and 38. At day 67, 36% of the C₄-sucrose was left in the treatment without a second amendment. The addition of C₃-cellulose resulted in a further 7% decrease, but 4% of the C₃-cellulose was lost during the second incubation period. Total microbial biomass C declined from 200 μg g^?1 soil at day 5 to 70 μg g^?1 soil at day 67. Fungal ergosterol increased to 1.5 μg g^?1 soil at day 12 and declined more or less linearly to 0.4 μg g^?1 soil at day 67. Bacterial muramic acid declined from a maximum of 35 μg g^?1 soil at day 5 to a constant level of around 16 μg g^?1 soil. Glucosamine showed a peak value at day 12. Galactosamine remained constant throughout the incubation. The fungal C/bacterial C ratio increased more or less linearly from 0.38 at day 5 to 1.1 at day 67 indicating a shift in the microbial community from bacteria to fungi during the incubation. The addition of C₃-cellulose led to a small increase in C₃-derived microbial biomass C, but to a strong increase in C₄-derived microbial biomass C. At days 45 and 67, the addition of N-free C₃-cellulose significantly decreased the C/N ratio of the microbial residues, suggesting that this fraction did not serve as an N-source, but as an energy source.     

Differences in soil respiration between different tropical ecosystems

We examined the relationship between soil respiration rate and environmental determinants in three types of tropical forest ecosystem—primary forest, secondary forest, and an oil palm plantation in the Pasoh Forest Reserve on the Malaysian Peninsula. In August 2000, the soil respiration rate and environmental factors (soil temperature, soil water content, soil C and N contents, biomass of fine roots, and microbes) were measured at 12–16 points in research quadrats. Soil respiration rates were 831 ± 480, 1104 ± 995, 838 ± 143, 576 ± 374, and 966 ± 578 (mean ± S.D.) mg CO₂ m⁻² h⁻¹ in the primary forest canopy and gap site, secondary forest canopy and gap site, and oil palm plantation, respectively. Although the mean soil respiration rates in the three forest ecosystems did not differ significantly, differences were evident in the environmental factors affecting the soil respiration. The major causes of spatial variation in soil respiration were fine root biomass, soil water content, and soil C content in the primary and secondary forests and oil palm plantation, respectively.     

Relationships between C respiration and fine particulate organic matter (250–50 μm) weight

Soil organic matter (SOM) status was evaluated using the relationships between two independent soil variables, i.e., C respiration and the weight of particulate organic matter POM (4000–50 μm) under different vegetation covers and ecosystems of central Belgium. A positive relationship was found between the weight of the finest POM fraction, i.e., fine POM fraction (250–50 μm) and C respiration after 1 week (R² = 0.34, n = 120, p < 0.0001) and 2 weeks (R² = 0.28, n = 120, p < 0.0001) of incubation. Therefore, we assumed that the C respiration and the weight of fine POM might be used to evaluate the SOM status under different vegetation covers and ecosystems.     

The role of biological activity (roots,earthworms) in medium-term C dynamics in vertisol under a Digitaria decumbens (Gramineae) pasture

The natural abundance of ¹³C was used to estimate the turnover of the soil organic matter in a vertisol re-grassed with Digitaria decumbens (C4 plant) following intensive market gardening (C3 plants). In addition, the experimental design allowed us to determine the respective roles of roots and earthworms (Polypheretima elongata) in soil C stock restoration in D. decumbens pasture.The C stock increased from 31 to 37 Mg C ha⁻¹ in 5 years and the δ¹³C increased from −18.1‰ in market gardening soil to −15.5‰ in the 5-year-old pasture soil in the upper 20 cm. Below the 20 cm soil layer, the C stock and the δ¹³C did not change significantly in 5 years. The net gain of 6 Mg C ha⁻¹ was the balance of a loss of 5 Mg C ha⁻¹ derived from market gardening and a gain of 11 Mg C ha⁻¹ derived from D. decumbens. Effects of earthworms on the C dynamics were not discernible.     

Respiratory substrate availability plays a crucial role in the response of soil respiration to environmental factors

We examined the response of the temperature coefficient (Q₁₀) for soil respiration to changes in soil temperature and soil moisture through a laboratory incubation experiment. Two types of soils differing in vegetation and moisture status were collected and incubated under two temperatures (10 and 30 °C) and two soil moisture regimes (35 and 75% of water holding capacity, WHC) for 5 weeks. Before and after the incubation experiment, the temperature coefficient of soil respiration was measured using soda-lime method by changing temperature in a water bath. For both soils, the mean Q₁₀ values of the respiration rate were 2.0 in the 30 °C and 2.3 in the 10 °C soil treatments. Higher temperature with lower soil moisture treatment significantly decreased the Q₁₀ value, whereas lower temperature with higher soil moisture treatment significantly enhanced the Q₁₀ value (ANOVA, p < 0.05). These results indicate that soils became less sensitive to temperature when incubated under higher temperature with higher moisture conditions, and more sensitive in lower temperature with higher moisture conditions.There was a significant correlation (r² = 0.67, p < 0.05) between water-soluble carbon (WSC) and soil respiration rate. However, the correlation between soil respiration rate and microbial biomass carbon (MBC) was weak (r² = 0.27, p > 0.05). Although incubation temperature and moisture accounted for 40 and 29% (as r² × 100%), respectively, of variations in Q₁₀, soil water-soluble carbon content alone could have explained 79% of the variation, indicating that the availability of respiratory substrate, rather than the pool of soil microorganisms, played a crucial role in the response of the temperature coefficient to environmental factors. These results suggest that biotic factors should also be taken into consideration when using the Q₁₀ function to predict the response of soil respiration to global warming.