Estimation of heritability and response to selection for cut-flower yield in gerbera

Summary Heritabilities and responses to selection for cut flower yield were estimated for a population of gerbera. Broad-sense heritabilities averaged 42 percent, but may be as high as 66 percent. Narrow sense heritabilities averaged 68 percent when based on half-sib families, and averaged 60 percent when based on parent-offspring regression. These results suggest that most genetic variance for flower yield is additive.However, estimates of realized heritability averaged only 16 percent and inbreeding depression was estimated to be at least 38 percent, suggesting a major role for non-additive genetic variance. Nonetheless, selection for cut flower yield is expected to be successful.     

Breeding for resistance to Phialophora cinerescens (Wr.) van Beyma in glasshouse carnations (Dianthus caryophyllus L.)

Summary A breeding programme is described, aimed at introducing resistance to Phialophora cinerescens in glasshouse carnations of both the standard and the spray type. Four resistant clones, selected from seed-grown garden cultivars, served as resistant parents; the susceptible parents included the major glasshouse cultivar William Sim and some of its mutants and a few other American, French and Italian cultivars.In three generations of breeding, with extensive screening of young seedling populations, an adequate level of resistance had been reached. Selection procedure was henceforth changed to allow for primary selection on quality and productivity, followed by clonal resistance tests.Inheritance of resistance appears to be mainly additive; at least two gene pairs are likely to be involved. Under prolonged high infection pressure a significant non-additive variance can be demonstrated.     

Diallel analysis of barley for resistance to leaf stripe and impact of the disease on genetic variability for yield components

Barley breeders in Syria attempting to develop barley (Hordeum vulgare L.) cultivars resistant to barley leaf stripe (BLS) disease caused by Pyrenophora graminea Ito & Kuribayashi [anamorph Drechslera graminea (Rabenh. Ex. Schlech. Shoem.)]. Information on the combining ability for BLS resistance in Syria is not available. This study was conducted to evaluate, in 10 genetically diverse barley parents, general combining ability (GCA) and specific combining ability (SCA) effects towards the determination of the genetic basis of disease resistance and to estimate genetic variability for yield components and its modification by BLS. Ten parental genotypes varying in their reactions to BLS were crossed in a half-diallel mating design to generate 45 full-sib families. The families and the parents were inoculated with P. graminea and evaluated for resistance in replicated field tests (three inoculated and three non-inoculated plots). The parents chosen showed wide variations for resistance to BLS. Genetic component analysis showed significant effects for both GCA and SCA for resistance to BLS, suggesting that additive as well as non-additive genetic mechanisms were involved in the expression of resistance in these parents. GCA effects were more important than SCA effects. Resistant parents exhibited high negative GCA indicating that additive gene effects were more predominant, and suggesting their prime suitability for use in barley breeding programs to improve resistance to BLS. Narrow-sense heritability was 58% and broad-sense heritability was 99% indicating that selection for BLS resistance should be effective in these crosses. A high genetic variability for the agronomic traits studied was observed. Yield components decreased significantly in inoculated plants and more pronounced in diseased plants. Significant GCA was observed for all traits. Values for GCA were, in some cases, significantly modified by BLS. This indicates that attention must be paid to the danger of drawing conclusion in quantitative genetics studies dealing with both diseased and healthy plants. Two genotypes, Banteng and Igri, had high negative GCA effects and are promising parents for enhancement of BLS resistance.     

Estimates of within family genetic variability for clonal selection in oil palm

Within family genetic and environmental variabilities in oil palm dura (D) ×pisifera (P) hybrid progenies were estimated from a D × P progeny test trial, a clonal trial and a clonal cum D × P progeny test trial and with the objective of examining the efficiency of selecting source palms (ortets) within family for clonal propagation. The clones were derived from seedling embryos or seedlings that were progeny reproductions of families proven in the first trial. The progenies in the second trial represented the source families of two sets of clones planted in the same trial. Estimates were obtained from: between and within family variance components; between and within clone variance components; and difference between pooled within family variance and pooled within clone variance. Estimates were generally similar with the different methods used. Within family genetic variabilities were generally low in progenies derived from more inbred parents especially in bunch and oil yields. In progenies from more outbred or variable parents, within family genetic variabilities were relatively higher particularly for oil to bunch and palm height; nevertheless environmental variabilities predominated. The low efficiency of within family palm or ortet selection for clone production and the need for repeated clonal tests over time and space to identify outstanding clones are stressed and the implications to commercial clonal propagation of oil palm discussed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Variation within and among Ladino white clover ecotypes for agronomic traits

Summary One set of 285 genotypes from three landraces and one natural population and a second set of 165 genotypes from two landraces and one natural population were evaluated in separate trials. Variation among populations was mostly accounted for by the difference between landrace and natural population genotype groups, the former showing features related to higher seed yield and short-term aerial dry matter (DM) yield and to lower persistence, cold tolerance and protein content. Compared to variance among ecotypes, that within ecotypes was never lower and it was at least four-fold higher for important traits such as aerial and total (aerial plus stolon) DM yield, stolon density, production of seed heads and cold tolerance. Landraces and natural populations showed similar levels of intra-population variation for all traits except cold tolerance, for which landraces tended to somewhat greater variation. Trait associations were less definite at the genotype level than what previously found in terms of mean values of the ecotypes. This finding and the relatively high broad sense heritability which was observed for all components of DM and seed yield can support the breeding activity on this clover. The level of variation and of heritability found for protein content do not suggest the routine evaluation of this trait in breeding programmes.     

Estimation of genetic variance components and heritabilities for cut-flower yield in gerbera using least squares and maximum likelihood methods

Summary Genetic variance components and heritability were estimated for cut-flower yield of gerbera in the Davis population using ordinary least squares and maximum likelihood methods. The overall estimate of narrow-sense heritability is 0.33 based on least squares (LS) and 0.31 based on maximum likelihood (ML). The results of the study indicate that (1) ML and LS provide very similar results if sample size is large enough, suggesting both are useful for plant breeding programs; (2) about one third of the variation in gerbera cut-flower yield is additive, implying selection in cut-flower will be successful; and (3) although additive variation gradually decreased, heritability remained near 0.27 suggesting there is still potential variation in the population for further selection.     

Inheritance of resistance to late blight (Phytophthora infestans) in potato

Under epiphytotic conditions for late blight in spring seasons, data were recorded on its intensity four times at 4 days intervals from the start of the disease in the field, in 114 (19 females × 6 males) progenies and their parents planted in randomized complete block design in the years 2005 and 2006. Regression and stepwise regression analysis showed that observations during the rapidly increasing phase of disease between initial and last phase of disease are more important than the observations at initial and last phase of the disease. Combining ability analysis on a sub-set of 68 progenies showed that the additive component of genetic variance was more important than the non-additive component of variance in inheritance of quantitative resistance to late blight. The per se performance of the parents does give an idea about their general combining ability (GCA). However, selection of parents based on their GCA will be very useful for breeding for quantitative resistance to late blight. Parents JX 90, JF 4841, CP 3356, CP 1358, CP 3290, JN 1197 and CP 3125 were found to have good GCA for quantitative resistance for late blight and the best six crosses for late bilght resistance based on mean performance involved parents with good combining ability only.     

Genetic analysis of ratooning ability of rice (Oryza sativa L.)

Summary Genetic analysis of generation means of F₁, F₂, F₃, F₄, and the parental populations of the cross IR10154-23-3-3A/IR15795-232-3-3-2 for ratooning ability was conducted. Good ratooning ability is a recessive trait. The parents differed by at least two pairs of major genes for ratooning ability. A large proportion of transgressive segregants in F₂ suggested that the expression of ratooning ability is influenced not only by major genes but also by modifiers. Broad-sense heritability estimates computed by different methods ranged from 0.66 to 0.88. Narrow-sense heritability by the F₄–F₃ regression method was 0.39. The heritability estimates were 0.42 and 0.33 by the variance component method. The prevalence of additive x additive type of gene effects along with prominent additive effects imply some scope for selection in the segregating generations. However, non-additive type of gene action also affects the expression of ratooning ability.     

Genetics of androgenesis in winter and spring wheat genotypes

Androgenetic response and its inheritance was studied in nine winter type and two spring type wheat genotypes by crossing them in line × tester fashion. The 18 F₁ and 11 parental genotypes were raised in completely randomized block design with three replications and subjected to anther culture. Data were recorded with respect to per cent calli induction, percent regeneration and per cent green plant development. Analysis of variance revealed considerable genetic variation for all the three component traits of androgenesis. Both additive and non-additive genetic variances were involved in the androgenetic response with the preponderance of non-additive gene action in case of calli induction and additive gene action for regeneration and green plant development. Low estimates of heritability (narrow sense) for calli induction and moderate for regeneration and green plantlet development were obtained. The genotypes, Henies VII, Pnfjoumee, Saptdhara, Sentry, Purthi of winter wheat and HPW147 of spring wheat were identified as good general combiners for almost all the androgenetic parameters and have potential use in future haploidy breeding programmes. This revised version was published online in July 2006 with corrections to the Cover Date.     

Diallel analysis of sweetpotatoes for resistance to sweetpotato virus disease

Sweetpotato virus disease (SPVD) is due to the dual infection and synergistic interaction of Sweetpotato feathery mottle potyvirus (SPFMV) and Sweetpotato chlorotic stunt crinivirus(SPCSV), and causes up to 98% yield loss in sweetpotato in East Africa. This study was conducted to determine the inheritance of resistance to SPVD in sweetpotato and to estimate the nature of genetic variance. Ten parental clones varying in reaction to SPVD were crossed in a half diallel mating design to generate 45 full-sib families. The families were graft-inoculated with SPCSV and SPFMV to induce SPVD and evaluated for resistance in a randomized complete block design at two sites in Namulonge, Uganda during 1998–2000. In serological assays for SPFMV and SPCSV,resistance to symptom development and recovery from initial systemic SPVD symptoms, characterised resistant genotypes. Genetic component analysis showed significant effects for both general combining ability (GCA) and specific combining ability (SCA) for resistance to SPVD. GCA to SCA variance component ratios were large (0.51–0.87), hence GCA effects were more important than SCA effects. Resistant parents exhibited high GCA indicating that additive gene effects were predominant in the inheritance of resistance to SPVD and recovery. Narrow-sense heritability (31–41%) and broad-sense heritability (73–98%) were moderate to high, indicating that rapid genetic gains for SPVD resistance could be accomplished by mass selection breeding techniques. Two genotypes, New Kawogo and Sowola, had high negative GCA effects and had several families in specific crosses,which exhibited rapid recovery from SPVD,and are promising parents for enhancement of SPVD resistance and recovery. This revised version was published online in August 2006 with corrections to the Cover Date.     

Inheritance of early blight resistance in diploid potatoes

Early blight (Alternatia solani) is a fungal disease in hot and humid environments, which causes leaf, stem and tuber lesions. Early blight resistance should be incorporated into potato cultivars because the fungicide spraying is an expensive solution for developing countries. The diploid cultivated species Solanum tuberosum group Phureja and group Stenotomum are sources of resistance alleles. The elucidation of the inheritance for early blight resistance must help to decide what could be the best breeding procedure to improve this diploid germplasm and transfer the resistance to the tetraploid level. Three experiments were carried out under controlled and field conditions to determine the heritability of this trait using nested and diallel mating designs with haploid, species and haploid-species hybrids. The narrow-sense heritability estimates were relatively high (0.64–0.78). This means that additivity was the most important type of gene action for determining resistance to early blight at the diploid level. The results suggested that diploid parents showing highest levels of resistance, throughout the cycle of disease development, can be used in 4x×2x crosses to obtain resistant tetraploid progenies to this fungal disease.     

Components of genetic variation for cut-flower yield in the Davis Population of Gerbera

Summary Genetic variances for cut-flower yield in Gerbera hybrida were partitioned into additive and dominance components. Mean additive variance was 37.3 with a standard error of 12.9. Mean dominance variance was 12.7 with a standard error of 32.6. The dominance ratio was 0.34. Narrow sense heritability, estimated from these components of variance, averaged 0.42 with a standard error of 0.13. Heritabilities estimated from parent-offspring regression averaged 0.25. Gain from selection was less then expected; realized heritabilities were approximately 0.20.     

Genetic variance models for the evaluation of resistance to powdery scab (Spongospora subterranea f. sp. subterranea) from long-term potato breeding trials

Breeding for resistance to soil-borne powdery scab in potato is an important component of the integrated management of this disease. Different genetic variance models within a mixed model framework were applied to data from long-term potato breeding trials, for the genetic evaluation of breeding lines. The multi-environment trial (MET) data came from 12 growing seasons (“years”, synonymous with environments) of New Zealand field trials screening for resistance to powdery scab on potato tubers. Pedigree information on a total of 1,031 genotypes was available. Additive components of the genetic effects were important with narrow-sense heritability estimates (and 95 % confidence intervals) from single-year analyses ranging from 0.26 (0.20, 0.44) to 0.57 (0.53, 0.85). Spatial components estimated from the residual plot effects were not important for most years and even when they were significant, estimates were small. In MET analyses, different variance structures for the genetic effects were tested; a homogeneous correlation model (CORH) gave a better fit to the data than a factor analytic FAk model of order (k), 1 and 2. The year-to-year genetic correlation estimate from CORH was 0.81 and compared with a range of 0.59–0.95 estimated from the FA1 model. There was no strong evidence of non-additive genetic effects with zero or boundary estimates for most years. Models which included the pedigree provided a better fit to the data than models that did not include this relationship information. There was no evidence for genetic improvement in resistance for powdery scab on tubers in the breeding population studied. This suggests that selection pressure for resistance in the past has been weak and greater consideration should be given to selecting parents on empirical breeding values to genetically improve breeding populations for resistance to powdery scab.     

QTL controlling partial resistance to Stagonospora nodorum leaf blotch in winter wheat cultivar Alba

Stagonospora nodorum blotch (SNB) is an important foliar and glume disease in cereals. Inheritance of SNB resistance in wheat appears quantitative. The development of partially resistant cultivars seems to be the only effective way to combat the pathogen. Partial resistance components like length of incubation period (INC), disease severity (DIS) and length of latent period (LAT) were evaluated on a population of doubled-haploids derived from a cross between the partially resistant cultivar Alba and the susceptible cultivar Begra. Experiments were conducted in controlled environments and the fifth leaf was examined. Molecular analyses were based on bulked segregant analyses (BSA) and screening with 240 microsatellites DNA markers. The QTL analysis revealed QTL on chromosome 6AL (designated as QSnl.ihar-6A) and putative QTL on chromosome 6D. The QSnl.ihar-6A accounted for 36% of the phenotypic variance for DIS and 14% for INC. The putative QTL accounted for 10% of the variability in INC and 8% of DIS components of SNB resistance.     

Inheritance of resistance to pendimethalin herbicide induced stem damage in soybean

Selective herbicides are valuable weed control tools; however, selectivity is not always complete, resulting in crop damage. Stem breakage, lodging, and enlarged hypocotyls (brittle bean syndrome) limit yields of soybean [Glycine max (L.) Merr.] genotypes treated with pendimethalin [N-(1-ethylpropyl)-3,4-dimethyl-2,6-dinitrobenzenamine]. Developing genotypes with resistance to pendimethalin injury would eliminate or reduce this problem. Genetic studies were conducted to determine the inheritance of resistance to pendimethalin induced stem damage. The F_2:3 progeny of crosses involving resistant ('Asgrow A4715' and 'Flyer') and susceptible (`Essex' and K87-7-95) genotypes were screened in a greenhouse. Each genotype was treated with 1.68 kg ha^-1 pendimethalin preemergence and irrigated as needed. Plants were scored at V4 for stem breakage. Progeny distributions indicated that resistance to brittle bean syndrome damage behaved as a quantitative trait. Dominance for stem breakage was expressed in the population of A4715 × Essex. Flyer was more sensitive to herbicide damage than Asgrow A4715 because it has fewer genes for resistance or different alleles. The F_2:3 variance component heritability estimates ranged from 0.19 to 0.52. Gain from selection for resistance to pendimethalin injury is possible, and resistant progeny can be recovered from segregating populations. This revised version was published online in August 2006 with corrections to the Cover Date.     

Genetics and population improvement of resistance to bacterial soft rot in Chinese cabbage

Resistance to bacterial soft rot caused by Erwinia carotovora subsp. carotovora is a quantitative trait. The narrow-sense heritability was from 42% to 60% in the studied populations. Griffing's diallel analysis and generation mean analysis indicated that additive genetic effects were most significant, and the resistant sources involved in this study appeared to have different genes or alleles. Recurrent phenotypic selection was used for improving the resistance level by combining different resistance genes from the selected genotypes of Chinese cabbage. After 3 cycles of recurrent selection, the level of resistance increased markedly. When the cycle 3 population was compared with the cycle 0 population, the mean disease severity rating was reduced 38% from 6.3 to 3.9, and the percentage of plant survival increased from 65% to 97% based on the mean of two years experiments using mist-chamber seedling inoculation methods. The improvement of resistance was also demonstrated in field assays. This revised version was published online in July 2006 with corrections to the Cover Date.     

Heritability and gain from selection for quantitative resistance to Xanthomonas campestris pv. vesicatoria in Capsicum annuum L.

Summary Breeding for disease resistance in peppers (Capsicum spp.) to the bacterial spot pathogen (Xanthomonas campestris pv. vesicatoria (Doidge) Dye) has been based on either qualitative or quantitative evaluation methods. Quantitative evaluation of components of resistance, lesion number and lesion diameter, has been useful for determining quantitative resistance, but few breeders have applied these methods in routine selection programs. This study was aimed at determining the heritability and gain from selection for resistance to the bacterial spot pathogen based on three components of resistance. Random selections from a diverse intermated population of Capsicum annuum L. were self-pollinated for two generations to create S₁ and S₂ families. Thirty S₁ families, corresponding S₂ families and four homozygous check lines were evaluated. At forty-two days after seeding, two different leaves of each plant were inoculated by leaf infiltration with low concentrations (5×10³ colony forming units) of Group 2 (XCV PT, race 1) and 4 (XCV P, race 1) of the bacterium, respectively. After 15 days, lesion number cm^-2 and lesion diameter were measured. Total lesion area was calculated. Narrow-sense heritabilities for lesion number, lesion diameter, and total lesion area were 0, 43, and 31%, respectively, with Group 2, and 26, 43, and 33%, respectively, with Group 4. Actual S₂ gain from 20% selection pressure in the S₁ was approximately 50%, when selection towards resistance was based on total lesion area.     

Combining ability analysis of resistance to Helminthosporium leaf blight in spring wheat

Wheat breeders in South Asia are attempting to develop wheat (Triticum aestivum L.) cultivars resistant to Helminthosporium leaf blight (HLB), which occurs mainly as a complex of spot blotch caused by Cochliobolus sativus (Ito & Kuribayashi) Drechs. ex Dastur, and tan spot caused by Pyrenophora tritici-repentis (Died.) Drechs. Information on the combining ability for HLB resistance in wheat cultivars of South Asia is not available. This study was undertaken to examine the resistance to HLB in nine genetically diverse wheat parents, and to evaluate their general combining ability (GCA) and specific combining ability (SCA) effects toward determining the genetic basis of disease resistance. Nine parents were crossed in a half-diallel mating design to produce 36 populations. The F₁ and F₂ progenies, and the parents were evaluated in replicated field tests at Rampur, Nepal. Multiple disease scores were recorded, and area under the disease progress curve (AUDPC) was calculated to measure disease severity over time. The combining ability analysis was performed using Griffing's Method 2, Model 1. The parents chosen showed wide variation for resistance to HLB. They and the F₁ and F₂ progenies differed significantly for AUDPC. GCA and SCA effects were significant in both generations suggesting that additive as well as non-additive genetic mechanisms were involved in the expression of resistance in these parents. Wheat genotypes 'SW89-5422', 'G 162', 'NL 781'and 'Chirya 7' had significantly negative GCA effects for AUDPC in both F₁ and F₂ generations, suggesting their prime suitability for use in wheat breeding programs to improve resistance to HLB. The estimate of narrow-sense heritability was 0.77 in both generations suggesting that selection for HLB resistance should be effective in these crosses. The results indicate a predominance of additive gene action in the inheritance of HLB resistance in spring wheat.     

Response of a new IR50/Moroberekan recombinant inbred population of rice (Oryza sativa L.) from an indica × japonica cross for growth and yield traits under aerobic conditions

Genetic variability, correlation, path coefficient analysis and test of normality was conducted in an F₈ recombinant inbred aerobic rice population developed by single seed descent method to evaluate its potential as a mapping population. Estimates of genotypic variance, phenotypic variance, genotypic coefficient of variance (GCV), phenotypic coefficient of variance (PCV), heritability in the broad sense (H) and expected genetic advance at 5% selection index (GA) for grain yield and other attributing characters were computed. In all the cases, PCV was higher than GCV indicating the influence of environment on the characters. High heritability coupled with high GA was observed for several plant traits; number of tillers, plant height, total number of spikelets panicle⁻¹, biomass plant⁻¹, straw weight, harvest index and grain yield plant⁻¹ and hence offered good scope for selection. Grain yield plant⁻¹ was found to be positively correlated with plant height, number of tillers, panicle length, panicle exsertion, number of panicles plant⁻¹, single panicle weight, test weight, number of fertile spikelets panicle⁻¹, straw weight, biomass plant⁻¹, harvest index and grain breadth both at genotypic and phenotypic levels. Harvest index exerted maximum positive direct effect, followed by biomass plant⁻¹ and straw weight on grain yield plant⁻¹ at phenotypic level. Shapiro-Wilks “W test of normality” indicated that the population was skewed towards female parent IR50 for some traits and for some others towards Moroberekan, the male parent. Most of the characters that showed skewness were platykurtic with a kurtosis value of less than 3.     

Variation and covariation of silage maize digestibility estimated from digestion trials with sheep

Summary Variation and covariation for agronomic and digestibility traits of silage maize are reported from a compilation of 22 years of experiments with standard sheep. Genotype effects of DOM and DCF were highly significant, even when genotypes were nested in earliness groups or brown-midrib hybrids discarded (Table 2). The genetic variance of crude fiber content was low, but the variance of the DCF was high. The genetic variance of DOM was about 4 times lower than genetic variance of DCF, but broad sense heritability of DOM was higher because of lower residual variance (Table 3). Genetic correlations between grain or crude fiber content and DOM had similar absolute values, 0.65, so each of these two traits was an important but not the unique determinant of silage maize quality. There was no correlation between DCF and grain or crude fiber content. Yield was not related to DOM or DCF within each group of earliness, allowing some quality improvement without agronomic drift (Table 4). Except for late hybrids, most of DOM differences between groups of earliness came from lowering of minimum value, while maximum values were similar. It was the contrary for DCF, with similar minimum values for all groups (Table 5). There was no obvious correlation between year of registration of hybrids and DOM or DCF, but extra new variation seemed obtained only for low values (Figs 1, 2; Table 6). IVDOM according to the APC process was a poor predictor of DOM, especially when brown-midrib hybrids and earliness effects were discarded; but because heritability of this trait was similar to DOM heritability, such enzymatic processes could probably be used to avoid drift towards poor DOM with hybrids bred for higher stalk strength.Abbreviations APC Amylase Pepsine Cellulase solubility - DDM sheep digestibility of dry matter - DOM sheep digestibility of organic matter - DCF sheep digestibility of crude fiber - DM dry matter - IVDCW in vitro digestibility of cell wall - IVDDM in vitro digestibility of dry matter - IVDOM in vitro digestibility of organic matter - NIRS near infra-red reflectance spectroscopy - NDF neutral detergent fiber - bm₁-brown-midrib-1 allele, bm₃-brown midrib-3 allele