Critical review of the impact of cover crops on soil properties

Grasses as well as leguminous and non-leguminous broadleaves are the major categories of commonly grown cover crops worldwide. This review focuses on the contribution of cover crops to soil properties. The review first considers the single and mixed cover crops and shows that grass species are desirable for their decay and ability to provide substantial soil cover, broadleaf species are used for their quick decomposition and capacity of releasing residues into the soil, while the leguminous species are used for their ability to fix atmospheric nitrogen. Secondly, the impacts of cover crops on soil health are reviewed. Integrating cover crops into conventional cropping systems may reduce soil bulk density, improve soil structure and hydraulic properties to facilitate increased water infiltration and storage. Crop residue additions from cover crops may enhance soil organic C and N accretion as well as increase availability of P, K, Ca, Fe and Mg in some soil types under certain climatic conditions. Further, cover crops may provide a better condition for microbial activity, abundance, and diversity. Finally, the review shows that through proper management, cover crops may be utilized as an essential component of soil conservation practices for enhanced soil health. Still, further investigation is necessary to determine cover crop effects in additional cropping systems and climatic zones as well as the long-term effects of cover crops on soil properties, subsequent crop yield, and overall cropping system profitability. This review is an important source of information for crop growers, crop management institutions, universities, and crop consultants for sustainable agricultural production.     

Long term tillage,cover crop,and fertilization effects on microbial community structure,activity: Implications for soil quality

Conservation agriculture practices, such as reduced tillage, cover crops and fertilization, are often associated with greater microbial biomass and activity that are linked to improvements in soil quality. This study characterized the impact of long term (31 years) tillage (till and no-till), cover crops (Hairy vetch- Vicia villosa and winter wheat- Triticum aestivum, and a no cover control), and N-rates (0, 34, 67 and 101 kg N ha⁻¹) on soil microbial community structure, activity and resultant soil quality calculated using the soil management assessment framework (SMAF) scoring index under continuous cotton (Gossypium hirsutum) production on a Lexington silt loam in West Tennessee.No-till treatments were characterized by a significantly greater (P < 0.05) abundance of Gram positive bacteria, actinomycetes and mycorrhizae fungi fatty acid methyl ester (FAME) biomarkers compared to till. Saprophytic fungal FAME biomarkers were significantly less abundant (P < 0.05) under no-till treatments resulting in a lower fungi to bacteria (F:B) ratio. Key enzymes associated with C, N & P cycling (β-glucosidase, β-glucosaminidase, and phosphodiesterase) had significantly higher rates under no-till relative to till, corresponding to significantly greater (P < 0.05) soil C and N, extractable nutrients (P, K and Ca) and yields. Mycorrhizae fungi biomarkers significantly decreased (P < 0.05) with increasing N-rate and was significantly less (P < 0.05) under the vetch cover crop compared to wheat and no cover. Treatments under vetch also had significantly higher β-glucosaminidase and basal microbial respiration rates compared to wheat and no cover.Consequently, the total organic carbon (TOC) and β-glucosidase SMAF quality scores were significantly greater under no-till compared to till and under the vetch compared to wheat and no cover treatments, resulting in a significantly greater overall soil quality index (SQI).Our results demonstrate that long-term no-till and use of cover crops under a low biomass monoculture crop production system like cotton results in significant shifts in the microbial community structure, activity, and conditions that favor C, N and P cycling compared to those under conventional tillage practices. These practices also led to increased yields and improved soil quality with no-till having 13% greater yields than till and treatments under vetch having 5% increase in soil quality compared to no cover and wheat.     

Tillage and cover effects on soil microbial properties and fluometuron degradation

This research concerns the influence of no tillage (NT) or conventional tillage (CT) and a ryegrass (Lolium multiforum Lam.) cover crop in a cotton (Gossypium hirsutum L.) production system on soil and ryegrass microbial counts, enzyme activities, and fluometuron degradation. Fluorescein diacetate hydrolysis, aryl acylamidase, and colony-forming units (CFUs) of total bacteria and fungi, gram-negative bacteria, and fluorescent pseudomonads were determined in soil and ryegrass samples used in the degradation study. Fluometuron (14C-labelled herbicide) degradation was evaluated in the laboratory using soil and ryegrass. The CT and NT plots with a ryegrass cover crop maintained greater microbial populations in the upper 2 cm compared to their respective no-cover soils, and CT soils with ryegrass maintained greater bacterial and fungal CFUs in the 2–10 cm depth compared to the other soils The highest enzymatic activity was found in the 0–2 cm depth of soils with ryegrass compared to their respective soils without ryegrass. Ryegrass residues under NT maintained several hundred-fold greater CFUs than the respective underlying surface soils. Fluometuron degradation in soil and ryegrass residues proceeded through sequential demethylation and incorporation of residues into nonextractable components. The most rapid degradation was observed in surface (0 to 2 cm) soil from CT and NT–ryegrass plots. However, degradation occurred more rapidly in CT compared to NT soils in the 2 to 10 cm depth. Ryegrass cover crop systems, under NT or incorporated under CT, stimulated microbiological soil properties and promoted herbicide degradation in surface soils.     

Comparison of two spring seeding methods to establish forage cover crops in relay with winter cereals

The establishment of cover crops, in relay, to minimise soil erosion, improve soil physical condition and provide a main-season crop in rotation with potatoes (Solanum tuberosum L.) is a recommended agronomic practice in Atlantic Canada. This is usually achieved by seeding winter rye (Secale cereale L.) or winter wheat (Triticum aestivum L.) immediately after potato harvest for ground cover followed, the next spring, by inter-seeding an annual or biennial forage crop by drilling. Spring drill seeding can, however, be delayed or prevented by wet ground conditions, thus, making broadcast seeding a considered alternative. This study examined, therefore, the comparative merits of spring broadcast seeding and drill seeding of two adapted forages, Italian ryegrass (Lolium multiflorum Lam.) and red clover (Trifolium pratense L.), into a standing crop of fall-seeded winter rye or winter wheat. Crop performance was evaluated, using meter-square quadrats, as ground coverage and grain yield (of cereals). Soil compaction, evaluated as shear strength in the 0–15 cm layer (avoiding wheel tracks) of a fine sandy loam (Orthic Podzol), was greater after drill seeding than after broadcast seeding by a factor of 7.2% and was attributed to the greater ground-contact mass of the drill seeder. The forage crops provided 5.5% more ground coverage with drill seeding than with broadcast seeding. However, seeding method had no effect on the cereal host crops' ground coverage or grain yield. Ryegrass coverage was 123% of red clover coverage and winter rye coverage was 176% of winter wheat coverage. Forage coverage, in this study, suffered no setback because of the greater soil compaction associated with drill seeding. However, soils are subject to greater compaction under wetter conditions, thus, broadcast seeding is expected to be a better option, the wetter the spring.     

熏蒸处理对土壤微生物及硝化作用的影响

在田间条件下用溴甲烷(68.1g/m2)、威百亩(7.5mL/m2)进行土壤熏蒸,调查两种药剂对土壤微生物及硝化作用的影响。结果表明:两种熏蒸剂对土壤放线菌无抑制作用,对细菌总量影响较小,但亚硝酸细菌受到强烈抑制,土壤的硝化作用受到明显影响;同时,土壤中真菌的数量及种类变化显著。熏蒸后9周,处理区土壤中的微生物基本恢复正常。     

Evaluation of the characteristics of 14 cover crops used in a soil rehabilitation trial

Many of the soils in Santa Cruz Department, Bolivia, are degraded by serious weed infestation, subsoil compaction, and low organic matter and nitrogen contents. Fallow periods with cover crops are frequently used to recuperate the fertility of degraded soils, but little information exists on the desired characteristics of cover crops for this purpose. The aim of this study was to describe those characteristics, believed to be most relevant to the rehabilitation of degraded soils in Santa Cruz, of 14 cover crops, which included three grasses, nine legumes, and two winter cover crops sown after summer soybean (Glycine max). The cover crop characteristics, evaluated over two years, were ease of establishment, competitiveness against weeds, tolerance to drought, dry matter production and nutrient contents of the above-and below-ground residues, nodulation, rooting density and root diameters. The three grasses Tobiata (Panicum maximum var. Tobiatd), Centenario (Panicum maximum var. Centenario) and Brizantha (Brachiaria brizantha) appeared to be the most promising for increasing soil organic matter contents, and the three grasses and groundnuts (Arachis hypogaea)/pigeon pea (Cajanus cajan) for the recuperation of subsoil structure. Mucuna deeringiana and Lablab (Dolichos lablab) were the most promising for increasing soil N status. All of these cover crops competed successfully with weeds.     

Soil microbial activity and biomass is stimulated by leguminous cover crops

The leguminous cover crops Atylosia scarabaeoides (L.) Benth., Centrosema pubescens Benth., and Pueraria phaseoloides (Roxb.) Benth., were grown in the interspaces of a 19 y–old coconut plantation and incorporated into the soil at the end of the monsoon season every year. At the end of the 12th year, soils from different depths were collected and analyzed for various microbial indices and their interrelationships. The objectives were to assess the effects of long‐term cover cropping on microbial biomass and microbial‐community structure successively down the soil profile. In general, total N (TN), organic C (OC), inorganic N, extractable P, and the levels of biological substrates viz., dissolved organic C (DOC) and N (DON), labile organic N (LON), and light‐fraction organic matter (LFOM) C and N decreased with depth at all the sites. Among sites, the cover‐cropped (CC) sites possessed significantly greater levels of TN, OC, DOC, DON, and LON compared to the control. Consequently, microbial biomass C (MBC), N (MBN), and P (MBP), CO₂ evolution, and ATP levels, in general, decreased with depth at all sites and were also significantly higher in the CC sites. Among the ratios of various microbial indices, the ratio of MBC to OC and metabolic quotient (qCO₂) declined with depth. Higher MBC‐to‐OC ratios and large qCO₂ levels in the surface soils could be ascribed to greater levels of readily degradable C content and indicated short turnover times of the microbial biomass. In contrast, the ratios of MBC to MBN and MBC to MBP increased with depth due to low N/P availability and relatively higher C availability in the subsoils. Cover cropping tended to enhance the ratios of MBC to OC, MBC to MBN, MBC to MBP, and ergosterol to MBC and decreased the ATP‐to‐MBC ratio at all depths. The relatively lower ATP‐to‐MBC ratios in the CC site, especially in the subsoil indicated microbial‐community structure possibly dominated by fungi. By converting the ergosterol content to fungal biomass, it was observed that fungi constituted 52%–63% of total biomass C at the CC site, but only 33%–40% of total biomass C at the control site. Overall, the study indicated that leguminous cover crops like P. phaseoloides or A. scarabaeoides significantly enhanced the levels of OC, N and microbial activity in the soils, even down to 50 cm soil depth.     

Soil microbial communities under different soybean cropping systems: Characterization of microbial population dynamics, soil microbial activity, microbial biomass, and fatty acid profiles

This work analyzes the direct effect of soil management practices on soil microbial communities, which may affect soil productivity and sustainability. The experimental design consisted of two tillage treatments: reduced tillage (RT) and zero tillage (ZT), and three crop rotation treatments: continuous soybean (SS), corn–soybean (CS), and soybean–corn (SC). Soil samples were taken at soybean planting and harvest. The following quantifications were performed: soil microbial populations by soil dilution plate technique on selective and semi-selective culture media; microbial respiration and microbial biomass by chloroform fumigation-extraction; microbial activity by fluorescein diacetate hydrolysis; and fatty acid methyl ester (FAME) profiles. Soil chemical parameters were also quantified. Soil organic matter content was significantly lower in RT and SS sequence crops, whereas soil pH and total N were significantly higher in CS and SC sequence crops. Trichoderma and Gliocladium populations were lower under RTSS and ZTSS treatments. Except in a few cases, soil microbial respiration, biomass and activity were higher under zero tillage than under reduced tillage, both at planting and harvest sampling times. Multivariate analyses of FAMEs clearly separated both RT and ZT management practices at each sampling time; however, separation of sequence crops was less evident. In our experiments ZT treatment had highest proportion of 10Me 16:0, an actinomycetes biomarker, and 16:1ω9 and 18:1ω7, two fatty acids associated with organic matter content and substrate availability. In contrast, RT treatment had highest content of branched biomarkers (i15:0 and i16:0) and of cy19:0, fatty acids associated with cell stasis and/or stress. As cultural practices can influence soil microbial populations, it is important to analyze the effect that they produce on biological parameters, with the aim of conserving soil richness over time. Thus, in a soybean-based cropping system, appropriate crop management is necessary for a sustainable productivity without reducing soil quality.     

Responses of soil nematode community structure to soil carbon changes due to different tillage and cover crop management practices over a nine-year period in Kanto,Japan

The response of the soil food web structure to soil quality changes during long-term anthropogenic disturbance due to farming practices has not been well studied. We evaluated the effects of three tillage systems: moldboard plow/rotary harrow (MP), rotary cultivator (RC), and no-tillage (NT), three winter cover-crop types (fallow, FL; rye, RY; and hairy vetch, HV), and two nitrogen fertilization rates (0 and 100 kg N ha⁻¹ for upland rice, and 0 and 20 kg N ha⁻¹ for soybean production) on changes in nematode community structure. Sixty-nine taxa were counted, total nematode abundance (ALL), bacterial feeders (BAC), predators (PRD), omnivores (OMN), and obligatory root feeders (ORF) were more abundant in NT than in MP and RC, but fungal feeders and facultative root feeders (FFR) were more abundant in RC than in NT and MP. Cover crop also influenced nematode community structure; rye and hairy vetch were always higher in ALL, BAC, FFR, ORF, and OMN than fallow. Seasonal changes in nematode community structure were also significant; in particular, as soil carbon increased, nematode abundance also increased. The relationship between nematode indices and soil carbon was significant only in NT, but not in MP and RC. In NT, with increasing soil carbon, enrichment index and structure index (SI) were positive and significant and channel index was negative. Bulk density was significantly negatively correlated with FFR and ORF. Seasonal difference in nematode community between summer and autumn was larger in an upland rice rotation than in a soybean rotation. Over the nine-year experiment, SI increased not only in NT but also in MP and RC, suggesting that repeated similar tillage inversions in agroecosystems may develop nematode community structures adapted to specific soil environmental conditions. Because NT showed the highest values of both SI and soil carbon, the increase of soil carbon in NT is expected to have a great impact on developing a more diverse nematode community structure.     

Functional and molecular responses of soil microbial communities under differing soil management practices

The effects of soil management on some microbiological properties and soil bacterial community structure were evaluated. Two field sites with the same soil type, located on the same geographic area adjacent to one other, have received different soil management practices and cultivation. One site has been subjected for 20 years to intensive horticulture under conventional tillage and irrigation with low quality salt-rich water; the second field site has been uncultivated for a long period and was turned to organic farming practices over the last 5 years and is currently cultivated with fruit orchard. Total bacterial counts, microbial ATP, microbial community metabolic (BIOLOG^®) profiles, and DNA fingerprinting by PCR-DGGE were determined. Two-way ANOVA revealed that total bacterial counts were not significantly (P>0.3) affected by the two different management practices; ATP content was consistently and significantly (P<0.001) lower in salt-water irrigated soil than in organic soil at the three sampling times. The cluster analysis of community level physiological profiles indicated that microbial communities were much more uniform in organic soil than in irrigated one, suggesting that salt-water irrigation could have affected the size of the microbial population, its metabolic activities, as well as its composition. Molecular patterns fitted the BIOLOG^® profile diversity. In particular, at any sampling time, PCR-DGGE patterns of bacterial DNA, extracted by an indirect method, significantly discriminated irrigated from organic soil samples. The PCR-DGGE patterns of total soil DNA, extracted by a direct method, showed a moderate to significant variation among irrigated and organic soil samples. Biochemical, microbiological and molecular data contributed to evidence a significantly different response of indigenous microflora to soil management by using saline water or organic farming.     

Arable weeds,cover crops,and tillage drive soil microbial community composition in organic cropping systems

Cover crops have traditionally been used to reduce soil erosion and build soil quality, but more recently cover crops are being used as an effective tool in organic weed management. Many studies have demonstrated microbial community response to individual cover crop species, but the effects of mixed species cover crop communities have received less attention. Moreover, the relationship between arable weeds and soil microbial communities is not well understood. The objective of this study was to determine the relative influence of cover crop diversity, early-season weed communities, and tillage on soil microbial community structure in an organic cropping system through the extraction of fatty acid methyl esters (FAMEs). A field experiment was conducted between 2009 and 2011 near Mead, NE where spring-sown mixtures of zero (control), two, and eight cover crop species were included in a sunflower–soybean–corn crop rotation. A mixture of four weed species was planted in all experimental units (excluding the no-cover control), and also included as an individual treatment. Cover crops and weeds were planted in late-March, then terminated in late-May using a field disk or sweep plow undercutter, and main crops were planted within one week of termination. Three (2009) or four (2010–11) soil cores were taken to a depth of 20 cm in all experimental units at 45, 32, and 25 days following cover crop termination in 2009, 2010, and 2011, respectively. Total FAMEs pooled across 2009 and 2010 were greatest in the two species mixture–undercutter treatment combination (140.8 ± 3.9 nmol g⁻¹) followed by the eight species mixture–undercutter treatment combination (132.4 ± 3.9 nmol g⁻¹). Abundance of five (2009 and 2010) and seventeen (2011) FAME biomarkers was reduced in the weedy treatment relative to both cover-cropped treatments and the no-cover control. In 2009 and 2010, termination with the undercutter reduced abundance of most actinomycete biomarkers while termination with the field disk reduced abundance of C18:1(cis11) and iC16:0. Canonical discriminant analysis of the microbial community successfully segregated most cover crop mixture by termination method treatment combinations in 2009 and 2010. Microbial communities were most strongly influenced by the presence and type of early-spring plant communities, as weeds exerted a strong negative influence on abundance of many key microbial biomarkers, including the AMF markers C16:1(cis11) and C18:1(cis11). Weeds may alter soil microbial community structure as a means of increasing competitive success in arable soils, but this relationship requires further investigation.     

Impact of soil fumigation practices on soil nematodes and microbial biomass

This study was designed to understand the impact of methyl bromide (MB) (CHaBr) and its alternatives on both free-living and root-knot nematodes in the soil. A randomized complete block experiment with six treatments and 4 replicates (each replicate in a separate greenhouse) was established in Qingzhou, Shandong Province, China. In addition to MB and untreated control (CK) treatments there were four alternative soil fumigation practices including MB virtually impermeable films (VIF), metam sodium (MS), MS VIF and soil solarization combined with selected biological control agents (SS BCA). Two tomato (Lycopersicum esculentum Mill.) cultivars, cv. Maofen-802 from the Xian Institute of Vegetable Science, China, and cv. AF179 Brillante from the Israeli Hazera Quality Seeds, were selected as test crops. The results indicated that Rhabditidae was the most dominant population with percentage abundance as high as 85% of the total number of identified free-living nematodes, followed by that of Cephalobidae. Methyl bromide and its alternatives except for the non-chemical SS BCA treatment controlled the target pest, root-knot nematodes. Also, the impact of the three chemical alternatives on free-living nematode number and functional group abundance was similar to the impact associated with a typical methyl bromide application. Chemical fumigation practices, especially that with MB, significantly reduced the number of nematodes in the soil and simultaneously significantly reduced the number of nematode genera thereby reducing nematode diversity. All the four soil chemical fumigation activities decreased soil microbial biomass and had an obvious initial impact on microorganism biomass. Furthermore, both plant-parasitic and fungivore nematodes were positively correlated with soil microbial biomass.     

Soil organic matter,microbial properties,and aggregate stability under annual and perennial pastures

The use of annually sown pastures to provide winter forage is common in dairy farming in many regions of the world. Loss of organic matter and soil structural stability due to annual tillage under this management may be contributing to soil degradation. The comparative effects of annual ryegrass pastures (conventionally tilled and resown each year), permanent kikuyu pastures and undisturbed native vegetation on soil organic matter content, microbial size and activity, and aggregate stability were investigated on commercial dairy farms in the Tsitsikamma region of the Eastern Cape, South Africa. In comparison with soils under sparse, native grassy vegetation, those under both annual ryegrass and permanent kikuyu pasture had higher soil organic matter content on the very sandy soils of the eastern end of the region. By contrast, in the higher rainfall, western side, where the native vegetation was coastal forest, there was a loss of organic matter under both types of pasture. Nonetheless, soil organic C, K₂SO₄-extractable C, microbial biomass C, basal respiration, arginine ammonification and fluorescein diacetate hydrolysis rates and aggregate stability were less under annual than permanent pastures at all the sites. These results reflect the degrading effect of annual tillage on soil organic matter and the positive effect of grazed permanent pasture on soil microbial activity and aggregation. Soil organic C, microbial biomass C, K₂SO₄-extractable C, basal respiration and aggregate stability were significantly correlated with each other. The metabolic quotient and percentage of organic C present as microbial biomass C were generally poorly correlated with other measured properties but negatively correlated with one another. It was concluded that annual pasture involving conventional tillage results in a substantial loss of soil organic matter, soil microbial activity and soil physical condition under dairy pastures and that a system that avoids tillage needs to be developed.     

Single season effects of mixed-species cover crops on tomato health (cultivar Celebrity) in multi-state field trials

Cover crop use can help mitigate the deleterious effects of common cropping practices (e.g., tillage) and is, therefore, an important component of soil health maintenance. While known to be beneficial in the long-term, the short-term effects of cover crops, specifically mixed-species cover crops in organic systems are less clear. Cover crop effects on tomato productivity and disease severity were recorded over three field seasons (2010, 2011 and 2012) at sixteen field sites in three states, Maryland, New York and Ohio (MD, NY and OH), each with distinct soilborne disease pressure. Plots of five state-specific cover crop treatments were established the season prior to tomato production; the resulting plant residue was incorporated the following spring approximately four weeks before tomato planting. Total fruit yields along with early-season shoot height and fresh weight were used to compare treatment effects on productivity. Treatment disease severity ratings relied on natural inoculum. Interestingly, the effect of a single season of cover cropping on total yield was significant in no more than 25% of all site years. Similarly, cover crop effects on tomato disease levels were significant in 0–44% of the sixteen field sites. However, significant field-specific patterns were observed in every state across multiple years for some treatments. For example, in New York in 2010, tomato yields following all mixed cover crops were greater than the single rye cover crop in one field, but this pattern was reversed in the adjacent field. Thus, no general recommendation of a specific cover crop mixture can be made for near-term enhancement of tomato productivity or for reduction of disease. Therefore, growers should focus on location and operation-specific variables when choosing cover crops.     

Cattle grazing increases microbial biomass and alters soil nematode communities in subtropical pastures

This study focused on examining the impacts of cattle grazing on belowground communities and soil processes in humid grasslands. Multiple components in the soil communities were examined in heavily grazed and ungrazed areas of unimproved and improved bahiagrass (Paspalum notatum Flugge) pastures in south-central Florida. By using small (1-m×1-m) sampling plots, we were able to detect critical differences in nematode communities, microbial biomass, and mineralized C and N, resulting from the patchy grazing pattern of cattle. Soil samples were collected on three occasions between June 2002 and June 2003. Microbial C and N were greater (P?0.01) in grazed than in ungrazed plots on all sampling dates. Effects of grazing varied among nematode genera. Most genera of colonizer bacterivores were decreased (P?0.10) by grazing, but more persistent bacterivores such as Euteratocephalus and Prismatolaimus were increased, as were omnivores and predators. Higher numbers of persisters indicated that grazing resulted in a more structured nematode community. Some herbivores, particularly Criconematidae, were decreased by grazing. Abundance of omnivores, predators, and especially fungivores were strongly associated with C mineralization potential. Strong correlation of microbial C and N with nematode canonical variables composed of five trophic groups illustrates important links between nematode community structure and soil microbial resources. Including the analysis of nematode trophic groups with soil microbial responses reveals detection of grazing impact deeper into the hierarchy of the decomposition process in soil, and illustrates the complexity of responses to grazing in the soil foodweb. Although highly sensitive to grazing impacts, small-scale sampling could not be used to generalize the overall impact of cattle grazing in large-scale pastures, which might be determined by the intensity and grazing patterns of various stocking densities at the whole pasture level.     

Bacterial,fungal and protozoan responses to chloroform fumigation in stored soil

Microbial biomass estimated by CO₂ evolution following fumigation was 2.5–14.7 times greater than that estimated by direct microscopy in prairie soil. Bacteria, fungi and protozoa were counted by direct microscopy before, during and periodically for 10 days following chloroform fumigation and compared with microbial biomass as estimated by CO₂ evolution and N mineralization following chloroform fumigation. Protozoan populations were reduced to below detection levels immediately after fumigation and remained below detection levels during incubation following fumigation. Bacterial and fungal populations were reduced by fumigation to 37–79% of their original populations but usually recovered to their initial numbers by the second day following fumigation. In one case protozoa contributed up to 74 μg C, or about half of the total microbial biomass, to CO₂ evolution following fumigation.Microbial biomass was estimated in soil wetted to 60% of water-holding capacity (WHC) 1 wk or 1 day before fumigation. Microbial activity changed during the 1 wk incubation before fumigation but not total microbial biomass determined by microscopy.The ratio of CO₂ evolved-to-N mineralized followed fumigation changed in direct proportion to the ratio of fungal-to-bacterial biomass present in the soil before fumigation. Although more experiments with different soils should be performed, these results indicate that CO₂ evolved or N mineralized varies with the ratio of fungal-to-bacterial biomass initially present.     

Effect of soil CO2 concentration on microbial biomass

The effect of increasing soil CO₂ concentration was studied in six different soils. The soils were incubated in ambient air (0.05 vol.% CO₂) or in air enriched with CO₂ (up to 5.0 vol.% CO₂). Carbon dioxide evolution, microbial biomass, growth or death rate quotients and glucose decay rate were measured at 6, 12 and 24 h of CO₂ exposure. The decrease in soil respiration ranged from 7% to 78% and was followed by a decrease in microbial biomass by 10–60% in most cases. High CO₂ treatments did not affect glucose decay rate but the portion of C_gluc mineralized to CO₂ was lowered and a larger portion of C_gluc remained in soils. This carbon was not utilized by soil microorganisms. Received: 30 August 1996     

The rehabilitation of degraded soils in eastern bolivia by subsoiling and the incorporation of cover crops

A high proportion of the soils in the central zone of Santa Cruz, eastern Bolivia, are chemically and physically degraded, with low organic matter and N contents, compacted subsoil layers and a propensity to crusting, hardsetting and wind erosion. The aim of the experiment discussed in this paper was to identify suitable cover crops to be used in combination with subsoiling for the rehabilitation of degraded soils and the improvement of crop yields in eastern Bolivia. Fertilizers were not used because of their high cost. An experiment with a split complete block design, with subsoiling and no-subsoiling as the main treatments, 14 cover crops and a continuously cultivated soybean/wheat control as the subtreatments, and four replications, was established on a degraded site comprising a mosaic of two compacted siliceous isohyperthermic soils (a coarse loamy Typic Ustropept and a fine loamy Typic Haplustalf). After a two-year fallow period, the cover crops were incorporated and test crops were sown for five seasons to evaluate the effects of the treatments on subsequent crop yields. Soil samples were taken to measure changes in chemical fertility. The only significant cover crop effect on soil nutrients was an increase in exchangeable K from 0.47 to 0.56 cmol_c kg⁻¹ by Lablab; subsoiling had no effect on chemical fertility. For all treatments there was an average 24 per cent increase in soil organic matter from 13.1 g kg⁻¹ at 3 months after cover crop incorporation to 16.3 g kg⁻¹ at 19 months after incorporation. No significant differences in total N were found during this period. Test crop yields were not influenced by subsoiling, but were significantly increased by some of the cover crops as compared to the soybean/wheat control during the first three seasons only. Evidence from foliar analysis suggests that the effects of the cover crops on soybean yields were not nutritional and so presumably were physical in nature, whereas the benefits on wheat yields were possibly related to increased N availability. Panicum maximum var. Centenario and P. maximum var. Tobiatá gave the highest total yield increases over the first three cropping seasons (101 and 85 per cent, respectively), but these yield increases would not compensate the farmer for the loss of four crop harvests whilst the land was in fallow. These results highlight the difficulties of rehabilitating soil fertility and increasing crop yields through the use of subsoiling and cover crop fallows on compacted, low organic matter soils in eastern Bolivia.     

Characterization of soil microbial communities under different potato cropping systems by microbial population dynamics, substrate utilization, and fatty acid profiles

The effects of 11 different 2- and 3-yr potato crop rotations on soil microbial communities were characterized over three field seasons using several techniques. Assessments included microbial populations determined by soil dilution plate counts on various general and selective culture media, microbial activity by fluorescein diacetate (FDA) hydrolysis, single carbon source substrate utilization (SU) profiles, and fatty acid methyl ester (FAME) profiles. Potato rotation crops evaluated in research plots at Newport, ME, included barley/clover, canola, green bean, millet, soybean, sweet corn, and a continuous potato control. Soil populations of culturable bacteria and overall microbial activity tended to be highest following barley, canola, and sweet corn rotations, and lowest with continuous potato. Differences among rotations were less apparent during the potato phase of the rotations. Populations of actinomycetes and fluorescent pseudomonads tended to be greater in barley rotations than in most other rotations. SU profiles derived from BIOLOG GN2 plates indicated that certain rotations, including barley, canola, and sweet corn tended to have higher overall microbial activity, and barley and sweet corn rotations averaged higher substrate richness and diversity. Soybean and potato rotations tended to have lower substrate richness and diversity. Principal component analyses of SU data revealed differences among rotation soil communities in their utilization of individual carbon sources and substrate guilds, including carbohydrates, carboxylic acids, amines/amides, and amino acids. Analyses of soil FAME profiles demonstrated distinct differences among all the rotation soils in their relative composition of fatty acids, indicating differences in their microbial community structure. Fatty acids most responsible for differentiation among rotation soils included 16:1 ω5c, 16:1 ω7c, 18:2 ω6c, 18:1 ω9c, 12:0, and 13:0 anteiso, with 16:1 ω5c being the single greatest determinant. Overall, monounsaturated fatty acids, particularly 16:1 ω5c, were most prevalent in sweet corn rotations and polyunsaturates were highest in barley and millet rotations. Straight chain saturated fatty acids comprised the greatest proportion of fatty acids in soils under continuous potato. FAME biomarkers for microorganism groups indicated barley and millet rotations had the highest ratio of fungi to bacteria, and soybean and continuous potato had the lowest ratio. This research has demonstrated that different crop rotations have distinctive effects on soil microbial communities that are detectable using a variety of techniques. Further studies will identify more specific changes associated with particular rotations and relate these changes to potential effects on disease management, crop health, and crop productivity.     

Microbial physiology and necromass regulate agricultural soil carbon accumulation

Strategies for mitigating soil organic carbon (SOC) losses in intensively managed agricultural systems typically draw from traditional concepts of soil organic matter formation, and thus emphasize increasing C inputs, especially from slowly decomposing crop residues, and reducing soil disturbance. However these approaches are often ineffective and do not adequately reflect current views of SOC cycling, which stress the important contributions of microbial biomass (MB) inputs to SOC. We examined microbial physiology as an alternate mechanism of SOC accumulation under organic (ORG) compared to conventional (CT) agricultural management practices, where ORG is accumulating C despite fewer total C inputs and greater soil tillage. We hypothesized that microbial communities in ORG have higher growth rates (MGR) and C use efficiencies (CUE) and that this relates to greater MB production and ultimately higher retention of new C inputs. We show that ORG had 50% higher CUE (±8 se) and 56% higher MGR (±22 se) relative to CT (p < 0.05). From in situ ¹³C substrate additions, we show that higher CUE and MGR are associated with greater rates and amounts of ¹³C glucose and phenol assimilation into MBC and mineral-associated SOC pools in ORG up to 6 mo after field substrate additions (p < 0.05). ORG soils were also enriched in proteins and lipids and had lower abundances of aromatic compounds and plant lipids (p < 0.05). These results illustrate a new mechanism for SOC accumulation under reduced C inputs and intensive soil disturbance and demonstrate that agricultural systems that facilitate the transformation of plant C into MB may be an effective, often overlooked strategy for building SOC in agricultural soils.