Histological alterations in gills of shrimp Litopenaeus vannamei in low‐salinity waters under different stocking densities: Potential relationship with nitrogen compounds

Two experimental modules with different stocking densities (M1 = 70 and M2 = 120 shrimp /m²) were examined weekly over a culture cycle in tanks with low‐salinity water (1.9 g/L) and zero water exchange. Results showed survival rates of 87.7 and 11.9% in M1 and M2, respectively. Water temperature, pH, dissolved oxygen, electrical conductivity and chlorophyll a were not significantly (p > .05) different between modules. In contrast, the concentrations of nitrogen compounds were significantly (p < .05) different between modules, except nitrite‐N (M2 were 2.31 ± 1.38 mg/L N‐TAN, 0.18 ± 0.49 mg/L N‐NO₂^? and 6.83 ± 6.52 mg/L N‐NO₃^?; in M1: 0.97 ± 0.73 mg/L N‐TAN, 0.05 ± 0.21 mg/L N‐NO₂^? and 0.63 ± 0.70 mg/L N‐NO₃^?). When waters of both modules reached higher levels of ammonia and nitrite, histological alterations were observed in gills. The histological alterations index (HAI) was higher in M2 (5‐112) than in M1 (2‐22).     

Effect of different biofloc system on water quality,biofloc composition and growth performance in Litopenaeus vannamei (Boone, 1931)

The experiment was conducted with three biofloc treatments and one control in triplicate in 500 L capacity indoor tanks. Biofloc tanks, filled with 350 L of water, were fed with sugarcane molasses (BFT_S), tapioca flour (BFT_T), wheat flour (BFT_W) and clean water as control without biofloc and allowed to stand for 30 days. The postlarvae of Litopenaeus vannamei (Boone, 1931) with an Average body weight of 0.15 ± 0.02 g were stocked at the rate of 130 PL m^?2 and cultured for a period of 60 days fed with pelleted feed at the rate of 1.5% of biomass. The total suspended solids (TSS) level was maintained at around 500 mg L^?1 in BFT tanks. The addition of carbohydrate significantly reduced the total ammonia‐N (TAN), nitrite‐N and nitrate‐N in water and it significantly increased the total heterotrophic bacteria (THB) population in the biofloc treatments. There was a significant difference in the final average body weight (8.49 ± 0.09 g) in the wheat flour treatment (BFT_W) than those treatment and control group of the shrimp. Survival of the shrimps was not affected by the treatments and ranged between 82.02% and 90.3%. The proximate and chemical composition of biofloc and proximate composition of the shrimp was significantly different between the biofloc treatments and control. Tintinids, ciliates, copepods, cyanobacteria and nematodes were identified in all the biofloc treatments, nematodes being the most dominant group of organisms in the biofloc. It could be concluded that the use of wheat flour (BFT_W) effectively enhanced the biofloc production and contributed towards better water quality which resulted in higher production of shrimp.     

Effect of different total suspended solids levels on a Litopenaeus vannamei (Boone, 1931) BFT culture system during biofloc formation

In a Biofloc Technology System (BFT), there is constant biofloc formation and suspended solids accumulation, leading to effects on water quality parameters that may affect the growth performance of cultured shrimp. This study aimed to analyse during biofloc formation the effect of different total suspended solids (TSS) levels on water quality and the growth performance of Litopenaeus vannamei shrimp in a BFT system. A 42‐day trial was conducted with treatments of three ranges of TSS: 100–300 mg L^?1 as low (TL), 300–600 as medium (TM) and 600–1000 as high (TH). The initial concentrations of 100 (TL), 300 (TM) and 600 mg L^?1 (TH) were achieved by fertilization before starting the experiment. Litopenaeus  vannamei juveniles with an average weight of 4.54 ± 1.19 g were stocked at a density of 372 shrimp m^?3. Physical and chemical water parameters and shrimp growth performance were analysed. After 6 weeks, TSS mean concentrations were 306.37, 532.43 and 745.2 mg L^?1 for, respectively, TL, TM and TH treatments. Significant differences (P < 0.05) were observed in TSS, settleable solids, pH, alkalinity and nitrite, especially between the TL and TH treatments. Similarly, differences (P < 0.05) were observed in the growth performance parameters, specifically final weight, survival, feed conversion and productivity. The water quality parameters at lower range of total suspended solids concentration (TL) treatment resulted in a better performance of L. vannamei in the BFT system. The maintenance at range of 100–300 mg L^?1 TSS is thus important to the success of shrimp culture.     

Influence of stocking density on the behaviour of juvenile Litopenaeus vannamei (Boone, 1931)

Applied ethology can help to improve Litopenaeus vannamei aquaculture. Our purpose was to demonstrate an influence of stocking density on behaviour. The shrimp were first distributed in aquaria and observed via an ad libitum observational method to construct an ethogram of social and feeding behavioural categories. The resulting ethogram consisted of retreat, cannibalism, getting to the feeding tray, occupying the feeding tray and getting feed. We then kept shrimp in aquaria at densities of 50, 75 and 100 animals m^?2 and observed them via a behavioural sampling method using our ethogram as well as focal animal sampling of behaviours derived from the literature. These literature‐derived behaviours consisted of inactivity, feeding, crawling, exploration, burying, swimming and cleaning. We found that stocking density affects the behaviour of the shrimp. Optimal searching and feeding and a low frequency of crawling and swimming occurred at a density of 50 animals m^?2, indicating a higher potential for growth and welfare at this density.     

Proteome modifications of Pacific white shrimp (Litopenaeus vannamei) muscle under biofloc system

The objective of the study was to examine the effects of biofloc technology on the muscle proteome of Litopenaeus vannamei. Two biofloc treatments and one control were compared: biofloc‐based tanks under zero‐water exchange fed with 150 g/kg crude protein (BF15), or with 250 g/kg crude protein (BF25) diets, and clear water tanks with 50% of daily water exchange stocked with shrimp fed with similar amount of a 250 g/kg crude protein diet, referred to as control. The shrimp (5.28 ± 0.42 g) were divided into the 300‐L fibreglass tanks (water volume of 200 L) at a density of 35 shrimp per tank and were cultured for 35 days. The biofloc groups displayed better growth and survival compared to the control. The muscle tissue from the control and BF25 groups was subjected to proteomic analysis. Lactate dehydrogenase, enolase, arginine kinase, mitochondrial ATP synthase subunit alpha, mitochondrial ATPase inhibitor factor 1 precursor, serpin 3 and myeloid differentiation factor 88 had an increased abundance in the BF25 group, while myosin heavy chain type 1 and myosin heavy chain type 2 showed a decreased abundance. The results indicate that biofloc technology could alter the expression of proteins involved in structure, metabolism and immune status of cultured shrimp.     

Partial replacement of fishmeal with biofloc meal in the diet of postlarvae of the Pacific white shrimp Litopenaeus vannamei

This study evaluated the potential for the replacement of fishmeal (FM) by biofloc meal (BM) in the diet of Litopenaeus vannamei postlarvae. Four isonitrogenous (437.42 g kg^?1) and isocaloric (19.84 kJ g^?1) diets were formulated, in which FM was replaced with BM at 0% (T0), 7.5% (T7.5), 15% (T15) and 30% (T30). A commercial diet (CD) was used as reference. The study was conducted over 42 days in 50 L tanks connected to a water recirculation system. All tanks were stocked with three postlarvae (initial weight 0.0023 g) per litre. Shrimp survival, weight gain (WG), final weight (FW), specific growth rate (SGR) and protein efficiency ratio (PER) were measured. Survival rates were high (>91.1%) in all treatments. As the T30 treatment returned a significantly (<0.05) better performance in WG, FW, SGR and PER than all other treatments, partial replacement of FM with BM does not appear to affect productivity. In fact, a regression analysis indicated that a FM to BM replacement level of over 20% may actually improve shrimp growth. In addition to providing a cost‐effective alternative ingredient for L. vannamei postlarvae diets, the production of meal also represents a more sustainable way of disposing of the excess of biofloc produced by BFT systems.     

Enhanced growth and immuno‐physiological response of Genetically Improved Farmed Tilapia in indoor biofloc units at different stocking densities

An experimental trial was conducted for 90 days to evaluate the growth performance, immunophysiological response of GIFT strain of Tilapia in biofloc‐based rearing system and to assess the relative percentage survival in 3 days after challenging with the virulent strain of Aeromonas hydrophila. Fingerlings with an average body weight 0.98 ± 0.06 g were stocked in triplicate at different stocking densities of 200 (SD1), 250 (SD2), 300 (SD3) and 350 (SD4) m^?3 in biofloc‐based treatments and 150 (C) m^?3 in control (clear water). Biofloc‐based units (SD1 and SD2) obtained significantly better (P < 0.05) growth performances at the end of the experimental period. Mean body weight of fish in biofloc‐based units showed a decreasing trend with increase in stocking density with 100% survival in all units including control. The stress parameters were significantly lower in biofloc‐based rearing units especially in treatments SD1 and SD2 as compared to the control. The fish from the biofloc‐based units (SD1 and SD2) possessed significantly (P < 0.05) higher immune status as compared to control and other biofloc treatments in terms of respiratory burst, serum lysozyme and myeloperoxidase activity. Relative survival percentages were significantly better in biofloc treatments with highest in SD1 and SD2 (83.33%) after challenge study. GIFT strain of Tilapia at higher stocking densities 200–250 nos m^?3 can be taken as optimum stocking density whereas higher stocking densities up to 350 nos m^?3 can be reared in the biofloc systems without compromising the growth and immunity.     

Replacement of fish oil with a DHA‐rich Schizochytrium meal on growth performance,activities of digestive enzyme and fatty acid profile of Pacific white shrimp (Litopenaeus vannamei) larvae

This trial was conducted to evaluate the effects of replacing dietary fish oil with Schizochytrium meal for Pacific white shrimp (Litopenaeus vannamei) larvae (initial body weight 4.21 ± 0.10 mg). Six test microdiets were formulated using Schizochytrium meal to replace 0 g/kg, 250 g/kg, 500 g/kg, 750 g/kg, 1000 g/kg or 1500 g/kg fish oil DHA. No significant differences were observed in survival, growth, final body length and activities of digestive enzyme among shrimp fed different diets (p > .05). No significant differences were observed in C20:5n‐3 (EPA) in muscle samples (p > .05). C18:3n‐3 and C20:4n‐6 in muscle increased as Schizochytrium meal replacement level increased (p < .05). No significant differences were observed in C22:6n‐3 (DHA) and n‐3 fatty acids among shrimp fed diets that algae meal replaced 0 g/kg ‐ 1000 g/kg of fish oil. Shrimp fed diet R150 had higher DHA content than other groups and had higher n‐3 fatty acids than that of shrimp fed diets R50, R75 and R100 (p < .05). C18:2n‐6, PUFA and n‐6 fatty acids in muscle increased, while n‐3/n‐6 ratio decreased with increasing algae meal replacement level from 0 g/kg to 1000 g/kg (p < .05). In conclusion, Schizochytrium meal could replace 1500 g/kg fish oil DHA in the microdiets without negatively affecting shrimp larvae survival, growth and activities of digestive enzyme.     

Assessment of the relative contribution of dietary nitrogen from fish meal and biofloc meal to the growth of Pacific white shrimp (Litopenaeus vannamei)

The relative contribution of the dietary nitrogen supplied by fish meal and a biofloc meal to the growth of Pacific white shrimp was evaluated using stable isotope analysis. Biofloculated material was obtained from an experimental tilapia culture system. Five formulated diets were supplied. Two of them consisted in isotopic controls having only fish meal or biofloc meal as protein source. Three mixed diets were formulated with varying proportions of these ingredients on a dietary nitrogen basis (75:25, 50:50 and 25:75). At the end of the trial, survival rates were similar (92–100%) but significant differences in mean final weight were observed and a negative correlation between the inclusion of biofloc meal and weight gain was evidenced. Mean final weight in shrimp fed on diet containing only fish meal was 2.8 g, while mean final weight of animals fed on diet containing 50% biofloc was 1.9 g. Isotopic mixing models indicated that all diets contributed higher proportions of dietary nitrogen from fish meal than from biofloc meal. Dietary nitrogen available in diets containing 25%, 50% and 75% of biofloc meal was incorporated in muscle tissue as 5%, 41% and 64% respectively. Diet supplying 25% of nitrogen from biofloc was the only mixed diet eliciting growth comparable to diet containing only fish meal. Lower growth and nitrogen deposition in shrimp fed on diets containing high proportions of biofloc meal were possibly associated to the use of only two protein sources and a restriction of essential amino acids.     

A comparison between water exchange and settling tank as a method for suspended solids management in intensive biofloc technology systems: effects on shrimp (Litopenaeus vannamei) performance,water quality and water use

Biofloc systems rely on microbial processes in the water column to recycle animal waste products, reducing the need for water exchange. These increases biofloc concentration in the water and some form of removal is needed. An experiment was carried out to evaluate two management practices to control biofloc in Litopenaeus vannamei culture. Six tanks (48 m³) were divided into two treatments: water exchange and solid settler. Shrimp were stocked at 164 shrimp m^?2 and with 0.67 g of weight. After 61 days, shrimp under solid settler treatment demonstrated mean weight of 12.7 ± 0.5 g with survival of 73.8 ± 1.4%, and those under water exchange had a final weight of 10.1 ± 0.2 g and survival rate of 57.8 ± 11.1%. Total suspended solids did not differ between the treatments: 326.8 ± 24.9 mg L^?1 for water exchange and 310.9 ± 25.3 mg L^?1 for solid settlers. Settleable solids and productivity/respiration ratio was higher (P < 0.05) in water exchange treatment, indicating differences in physical and biological characteristics of bioflocs. Solids removal method influenced the water use, in which 1150 ± 249 L of water was necessary to produce one kilogram of shrimp using water exchange strategy, and 631 ± 25 L kg^?1 with the use of settlers. Our results indicate that continuous operation of settlers can reduce variability in solids characteristics and water quality variables such as ammonia. Both strategies are efficient in controlling biofloc concentrations of the water; however, settlers can reduce water use and improve shrimp production.     

Nursery performance of Pacific white shrimp (Litopenaeus vannamei Boone, 1931) cultivated in a biofloc system: the effect of adding different carbon sources

Effect of different carbon sources on nursery performance of Pacific white shrimp (Litopenaeus vannamei) cultivated in biofloc system was investigated. Shrimp postlarvae (98.47 ± 8.6 mg) were fed for 32 days in tanks with water volume of 130 L and density of 1 individual L^?1. One control treatment and four biofloc treatments (BFT1, BFT2, BFT3 and BFT4) with adding different carbon sources including molasses, starch, wheat flour and mixture of them, respectively, were considered at equal weight ratios. According to the results, salinity, dissolved oxygen and pH were not significantly different among the biofloc treatments (P > 0.05). Maximum pH (8.27) and maximum dissolved oxygen (6.35 mg L^?1) were recorded in the control. Maximum (0.43 mg L^?1) and minimum (0.09 mg L^?1) ammonia were recorded in the control and BFT2, respectively (P < 0.05). Using simple carbohydrates (molasses and starch) lowered the ammonia concentration significantly. The highest increase in body weight (1640.43 ± 231.28 mg), growth rate, specific growth rate (8.97 ± 0.42% per day) and biomass (190.29 ± 26.83 mg) were found in BFT1 and the highest survival (90 ± 0.77%) was found in BFT4. The highest feed conversion (1.52 ± 0.23) and the lowest feed efficiency (66.81 ± 7.95) were observed in the control (P < 0.05). The proximate composition analysis revealed an increase in lipid and ash in biofloc treatments. Results indicated that using biofloc technology with zero‐water exchange system and adding carbon sources could help to recycle waste and improve the water quality. Moreover, the type of carbonaceous organic matter as a substrate for heterotrophic bacteria would be effective in degradation and metabolization of ammonia and nitrite.     

Artificial substrates in zero‐water‐exchange culture system regulate the rearing performance of Pacific white shrimp Litopenaeus vannamei (Boone, 1931) under the winter indoor condition

Effects of artificial substrates in zero‐water‐exchange culture system on the rearing performance of Litopenaeus vannamei under winter indoor condition were investigated in this study. Growth, survival, feed conversion rate (FCR), production rate of L. vannamei and water quality were compared between artificial substrate‐treated group (AST) and control group (without artificial substrates presented in the rearing environment). Artificial substrates can significantly improve the water quality, the ammonia and nitrite‐N concentrations in the AST group were significantly lower than in the control group (P < 0.05), and the total heterotrophic bacteria and Vibrio spp. were also significantly lower in the AST group (P < 0.05). The survival, growth and production rate of L. vannamei in the AST group were significantly higher than in the control group (P < 0.05). Significantly lower FCR was observed in the AST group (P < 0.05). Results from this study indicate that the utilization of artificial substrates in the indoor shrimp culture system could effectively control the water quality, improve the survival and growth of shrimp and significantly reduce the FCR. This study provides a guideline for employing artificial substrates in rearing of shrimp in the zero‐water‐exchange culture system under lower temperature, which could be applicable to other similar species.     

Growth parameters of whiteleg shrimp Litopenaeus vannamei and red seaweed Gracilaria corticata in integrated culturing method under zero water exchange system

Growth parameters of whiteleg shrimp Litopenaeus vannamei and red seaweed Gracilaria corticata were measured using integrated culturing method under zero‐water exchange system in a 45‐day period. A 2 × 3 factorial design was used with two levels of shrimp stocking densities and three levels of seaweed weight densities. G. corticata was cultured on a net tied to a round polyethylene frame. Culture tanks were filled with 750‐L filtered seawater. A 40‐W compact fluorescent lamp was hung over each tank to provide adequate and sufficient light for seaweed growth. Growth parameters of shrimp and seaweed such as specific growth rate (SGR), weight gained (WG) and average daily growth (ADG) were computed based on the initial and final weight of shrimp and seaweed. The maximum and minimum SGR of L. vannamei (1.97 and 1.69%/day) were observed in treatment S₁A₃ (25 shrimp/m² and 400 g seaweed/m²) and S₂A₁ (50 shrimp/m² without seaweed) respectively. The best survival rate (94.67 ± 1.33%), WG (129.9 ± 2.9%) and feed conversion ratio (1.67 ± 0.04) were also observed in treatment S₁A₃. The SGR of G.corticata in the treatment S₁A₃ (1.97 ± 0.00%/day) was significantly higher, compared to others. Strong positive correlations were obtained between the density of G. corticata and the growth parameters of L. vannamei. The red seaweed G. corticata could boost the growth parameters, survival rate and total production of L. vannamei under zero‐water exchange system.     

Effects of dietary phytase supplementation on growth performance and apparent digestibility coefficients of Pacific White Shrimp Litopenaeus vannamei

A growth trial and a digestibility trial were conducted to evaluate the efficacy of phytase supplemented to practical shrimp feeds. The 5 weeks growth trial evaluated the effects of phytase supplementation in replete phosphorus (P) diets on the performances and compositions of juvenile Pacific white shrimp, Litopenaeus vannamei. No significant differences were observed in final biomass, final mean weight, weight gain, feed conversion ratio (FCR), protein retention and survival across all the treatments. Shrimp reared on the P deficient diet had significantly higher P retention and lower whole body P levels as compared to shrimp fed the other diets. Copper content in the whole shrimp body was significantly increased in the treatment supplemented with 1,000 IU kg^?1 feed phytase. The digestibility trial was conducted to study the combined effects of phytase supplementation levels and diet type (plant‐based versus fishmeal‐based) on apparent digestibility coefficients of Pacific white shrimp, Litopenaeus vannamei. There were no effects of diet type so the data was combined. Phytase incorporation at both 500 and 2,000 IU kg^?1 significantly improved protein digestibility, whereas P digestibility was enhanced when 2,000 IU kg^?1 phytase was supplemented to the diet. Apparent digestibility coefficients of alanine, arginine, aspartic acid, cysteine, glutamic acid, glycine, histidine, isoleucine, leucine, lysine, methionine, ornithine, phenylalanine, proline, serine, threonine, tyrosine and valine were significantly increased when fed diets contained 500 and 2,000 IU kg^?1 phytase supplementation. Results of this work demonstrate that under the conditions of the study growth was not enhanced by phytase supplementation in P replete diets. However, nutrient retention for Cu and digestibility of P, protein and a number of amino acids were enhanced.     

Growth and production of endangered Indian butter catfish,Ompok bimaculatus (Bloch) at different stocking densities in earthen ponds

Growth, survival and production of endangered Indian butter catfish (Ompok bimaculatus) fingerlings were examined at different stocking densities. The experiment was conducted for 8 months in nine earthen ponds having an area of 0.03 ha each. 30‐day‐old fingerling, stocked at 40 000 ha^?1 was designated as treatment‐1 (T1), 50 000 ha^?1 as treatment‐2 (T2) and 60 000 ha^?1 as treatment‐3 (T3). At stocking, all fingerlings were of same age group with a mean length and weight of 3.36 ± 0.08 cm and weight of 0.83 ± 0.02 g respectively. Fish in all the treatments were fed with a mixture of rice bran (50%), mustard oil cake (30%), fish meal (19%) and vitamin‐mineral premix (1%). Physicochemical parameters, plankton populations and soil parameters were at the optimum level for fish culture. Highest weight gain was observed in T1 and lowest in T3. Final length, weight and survival of fish also followed the same trend as weight gain. Highest specific growth rate was observed in T1 followed by T2 and T3. Feed conversion ratio was significantly lower in T1 followed by T2 and T3 in that order. Significantly higher amount of fish was produced in T1 than T2 and T3 respectively. Higher net benefit was obtained from T1 than from T2 and T3. Overall, the highest growth, survival and benefit of fish were obtained at a density of 40 000 fingerlings ha^?1. Hence, of the three stocking densities, 40 000 fingerlings ha^?1 appears to be the most suitable stocking density for culturing of Indian butter catfish in grow‐out system.     

Growth and production performance of threatened snakehead fish,Channa striatus (Bloch), at different stocking densities in earthen ponds

Production trials of threatened snakehead fish (Channa striatus) were carried out under different stocking densities in earthen ponds of Bangladesh. The average weight and length of the fingerlings during stocking was 17.63 ± 1.23 g and 13.21 ± 0.52 cm. Fingerlings were stocked at 5000 ha^?1 in treatment‐1 (T₁), 6250 ha^?1 in treatment‐2 (T₂) and 7500 ha^?1 in treatment‐3 (T₃) respectively. Fish in all the experimental ponds were fed with supplementary feed comprising of fish meal (30%) and mustard oilcake (70%) at the rate of 3–6% of estimated body weight two times per day. In addition, trash fish were supplied at the rate of 2–3% of the estimated biomass on each alternate day. In situ water quality parameters of the pond were within the suitable range for fish culture. The growth and survival of fingerlings were significantly higher in T₁ than in T₂ and T₃. The food conversion ratio was significantly lower (P<0.05) in T₁ than in T₂ and T₃. The estimated gross and net production of fish was higher in T₁, followed by T₂ and T₃. Overall, the highest growth, survival and production were obtained from T₁. Therefore, it could be concluded that of 5000 fingerlings ha^?1 is the most suitable stocking density for culturing C. striatus under a monoculture system in the earthen ponds for better production.     

Use of microalgal‐enriched Diaphanosoma celebensis Stingelin, 1900 for rearing Litopenaeus vannamei (Boone, 1931) postlarvae

The present work investigates the effects of Chaetoceros calcitrans, Nannochloropsis oculata, Tetraselmis tetrahele and Isochrysis galbana diets on the lifespan, growth, neonate production and the nutritional profile of Diaphanosoma celebensis. In addition, the effects of enriched D. celebensis on the survival and growth of Litopenaeus vannamei postlarvae (PLs) was compared with Artemia. Results showed that significantly higher (P < 0.05) neonate production of D. celebensis was attained when fed with C. calcitrans compared to the other microalgae. In addition, D. celebensis fed on C. calcitrans had significantly higher levels (P < 0.05) of protein, lipid and carbohydrate compared to the other three microalgae. On the other hand, D. celebensis had a significantly (P < 0.05) longer lifespan when fed on N. oculata and T. tetrahele compared to those fed with C. calcitrans and I. galbana. Shrimp PLs fed D. celebensis enriched with C. calcitrans had higher survival and specific growth rate but it was not significantly different (P > 0.05) from PL fed only Artemia, indicating that D. celebensis has potential to be used as live feed for the hatchery rearing of L. vannamei PLs, in place of Artemia. This study illustrated that the quality of the D. celebensis production and proximate composition was highly correlated with the food type, and it can be used as a valuable live feed for shrimp larviculture.     

Effects of different carbon sources and dietary protein levels in a biofloc system on growth performance,immune response against white spot syndrome virus infection and cathepsin L gene expression of Litopenaeus vannamei

A 5‐week study was performed to evaluate the effect of spoilage date extract (SDE) as the biofloc carbon source on Litopenaeus vannamei (5.4 ± 0.3 g) performance. The two levels of dietary protein (15% and 25% crude protein) and two carbohydrate sources (molasses‐M and SDE‐P) were tested including: M15, M25, P15 and P25. The minimum (0.2 ± 0.0 mg/L) and the maximum (0.5 ± 0.0 mg/L) of total ammonia nitrogen were observed in the P15 and M25 groups respectively. The highest protein efficiency ratio (6.1 ± 0.3) and protein productive value (112.3 ± 5.8%) were found in the P15 group (p < 0.05). No significant difference was found between biofloc treatments in the expression of cathepsin L gene in hepatopancreas (p > 0.05). The number of total haemocyte count (THC), semigranular cells (SGC) and granular cells (GC) of shrimp in SDE‐based biofloc treatments was relatively higher than those in molasses‐based biofloc treatments. Following the white spot syndrome virus (WSSV) challenge, a significant decrease in THC, SGC, GC and hyaline cell values was observed in all treatments (p = 0.001). Plasma biochemical parameters were significantly influenced by dietary protein levels, biofloc carbon sources as well as WSSV challenge test. In conclusion, SDE successfully could be used as an alternative carbon source for establishing a biofloc system in L. vannamei production.