Characterization ofSolanum tuberosum simple sequence repeats and application to potato culiwar identification

With the continued introduction of new potato cultivars, accurate identification is becoming difficult but is essential for maintaining cultivar integrity and Plant Breeders’ Rights. Hypervariable DNA sequences, referred to as simple sequence repeats (SSRs) or microsatellites, have been reported to be an excellent source of genetic markers. To determine the abundance, distribution, and composition of SSRs withinSolanium tuberosum, 252 sequences were searched for tetranucleotide and smaller SSRs with a minimum length of 20 nucleotides and a maximum discrepancy of two nucleotides. In total, 40 unique SSRs were observed in the 252S. tuberosum sequences examined and occurred at a frequency of one SSR every 8.1 kb. To assess the ability of site-specific amplified SSRs to identify potato cultivars, a simple (TCAC)_m and compound (TCAC)_m ? (CTT)_n SSR 5’ to the starch synthase gene and a compound (C)_p ? (CT)_q ? (AT)_r ? (G)_s SSR 5’ to the sequence encoding mature proteinase inhibitor I, were examined and shown to produce unique DNA profiles for 73 of 95 tetraploid cultivars. In total, 24 alleles were observed at these loci and the accurately sized amplified DNA products can be used to establish a database for cultivar identification. Site-specific amplified alleles were somatically stable and have been conserved in clonal variants of Russet Burbank independently maintained for almost seven decades, a characteristic essential for cultivar identification. As genetic markers, the abundant, informative, and easily examined site-specific amplified alleles of SSRs are ideal for quickly and accurately determining cultivar identity of S.tuberosum ssp.tuberosum.     

In Search of Better Management of Potato Common Scab

Common scab (CS) is an important disease and quality problem in potato crops worldwide. CS degrades the appearance of the potato tubers, thereby diminishing market value. Knowledge of CS has expanded considerably over recent years, enabling improved detection of the causal pathogens and increased understanding of mechanisms of pathogenicity, and providing potential methods of modulating pathogen response for disease resistance. However, effective control of this disease remains elusive, and will require increased understanding of both the host and the pathogen. Traditional control strategies such as irrigation and reduced soil pH are not sufficient and often fail. Optimizing environmental conditions for reduction of CS can also lead to favorable conditions for other diseases. The most desirable control method would be disease-resistant potato cultivars. However, no currently available commercial potato cultivar has been shown to be completely resistant to CS. In this review, we provide an overview of potato CS caused by plant pathogenic Streptomyces species, recent research on mechanisms and management of the disease, and knowledge gaps that limit successful control of this ubiquitous and troublesome disease.     

Reinfection of potato seed stocks with potato virus S and potato virus X in Wisconsin

Reinfection of potato seed stocks with the potato viruses S (PVS) and X (PVX) varied with cultivar, virus, and grower. Rapid recontamination was observed for the cultivars Norgold Russet and Ontario with PVS and for the cultivars LaChipper, Norchip, and Norgold Russet with PVX. Recontamination was low for the cultivars LaChipper and Monona with PVS and for the cultivars Kennebec, Monona, Norland, and Superior with PVX. Survey results suggest that PVS and/or PVX can be eliminated from cultivars which appear to possess field resistance to infection, but that further evaluation of cultivars which are very susceptible to reinfection will be necessary.     

Relative resistance of potato cultivars to bacterial wilt

Fifty-one potato cultivars were evaluated for reaction to infection byPseudomonas solanacearum Sm. under high disease pressure in a field plot near Tifton, Georgia during the spring of 1978 and 1979. Plots were infested by clipping beds of thickly seeded tomato plants with a rotary mower contaminated with the wilt baterium in 1975, 1976, 1977 and 1978. The plants were incorporated into the soil following disease development. In addition to the use of infested soil, one stem on each potato plant was inoculated in late May by cutting with a knife blade dipped in a bacterial suspension. Most of the cultivars evaluated were highly susceptible to bacterial wilt. Ontario was the only cultivar highly resistant to the disease, with only 1% and 8% dead or dying plants in 1978 and 1979, respectively. Based on tuber infection, Ontario and Snowchip were the most resistant, with 9% and 14% infection, respectively, in 1978 and both 4% in 1979. Saco, Green Mountain and Sebago also showed some resistance.     

Potato cultivars: Genetic variation within putative clones

Four of five major cultivars of the potato (Solanum tuberosum L. ssp.tuberosum) from different sources were found to vary genetically. This variability was detected by an electrophoretic study of enzymatic activity for alkaline phosphatase and glucosephosphate isomerase. An examination of red cultivars from Beltsville, Md. suggests that the apparent intracultivar variability observed for Red Pontiac may be due to cultivar mislabeling rather than mutation or mitotic recombination. The results of this study raise concerns about potato cultivar certification and interpretations of some of the previous cultivar work. We suggest that a more extensive survey of intracultivar variability be carried out. Further, we suggest that these genetic markers and others could be used in cultivar identification.     

Potato Breeding and Seed Production System Development in Russia

First, an extensive literature review was performed with respect to Potato virus Y (PVY) resistance sources and their further utilization in a breeding programme. On the basis of that review we present a scheme of backcrossing and new cultivar creation on the basis of five detected sources of PVY resistance and one source of Potato virus X resistance. Some cultivar pedigrees are presented reflecting the differences in the breeding strategies. Moreover, results of investigations on some polygenic traits such as field resistance against late blight and starch content are presented. For these purposes progenies were screened for suitable recombinant genotypes which were used in further crossings. Also the results of investigations on resistance to the potato golden nematode and on the selection of cultivars suitable for processing are briefly analysed. We also describe a programme of parallel evaluation of identical hybrid populations in different soils and climatic zones. The development of seed potato production systems facilitated the conditions to improve the quality of potato seed material, to increase potato production and to allow Russia to participate in the international potato market. Systems of virus detection, norms and methods of laboratory tests as well as requirements for quality and tolerance levels of different seed classes (generations) were unified and harmonized with European systems.     

Potassium phosphite combined with reduced doses of fungicides provides efficient protection against potato late blight in large-scale field trials

Potato late blight caused by the oomycete Phytophthora infestans is a devastating disease of potato worldwide. Most of the potato cultivars grown in conventional agriculture are susceptible, or at best moderately resistant, and require frequent applications of fungicides to avoid heavy yield losses.In field trials spanning four years, we have investigated the effect of potassium phosphite, an inorganic salt on potato late blight. Potassium phosphite is known to induce defence responses in potato and to also have direct toxic effects on oomycetes, which in turn counteract late blight and tuber blight development. However, the use of this salt is not yet implemented and approved in European potato cultivation. We compared the effect of phosphite alone with fungicides currently used in Swedish potato cultivation. We also investigated the combined use of potassium phosphite and reduced doses of fungicides. Table potato cultivars and starch potato cultivars with different levels of resistance were used.We found that potassium phosphite in combination with reduced doses of fungicides results in the same level of protection as treatments with the recommended full dose of fungicides. These combined treatments reduce the need of traditional fungicides and may also decrease the selection pressure for fungicide resistance development in the pathogen. In relatively resistant starch potato cultivars using phosphite alone gave sufficient protection against late blight. Furthermore, in starch potato a combination of phosphite and fungicides at two-week intervals provided similar protection to weekly applications of fungicide at the recommended dose. Foliar treatment with phosphite also gave protection against tuber blight at similar levels to that of the best-performing fungicide. Our data suggests that potassium phosphite could be used in potato cultivation in temperate regions such as in Sweden, at least in combinations with reduced rates of fungicides. The implementation of the use of phosphite in practical potato crop protection as part of an IPM strategy is discussed. Doses, intervals and combinations could be adjusted to the level of cultivar resistance.     

Comparison of Mineral Oil and Rapeseed Oil Used for the Protection of Seed Potatoes against PVY and PVM Infections

The aim of this research was to compare the effectiveness of mineral oil with rapeseed oil in the protection of potato seeds against Potato virus Y (PVY) and Potato virus M (PVM) infection. The research was carried out under field conditions in the north of Poland, in the Department of Potato Protection and Seed Science of the Plant Breeding and Acclimatization Institute??National Research Institute at Bonin. The effects of oil protection on potato seed infection by viruses, yield, and its structure and phytotoxity were assessed. Two rapeseed oils and one mineral oil were used: Olejan 85 EC (85% of natural rapeseed oil), alimentary oil Marlibo (100% of natural rapeseed oil) and Sunspray 850 EC (98.8% mineral oil+1.2% emulsifier). The effectiveness of oils in protection against PVY and PVM tuber infection was tested on two cultivars (Clarissa and Rosalind), which have a different level of resistance to the two viruses. The assessment of phytotoxicity was carried out on 10 potato cultivars from different earliness groups (Augusta, Bryza, Cekin, Clarissa, Impala, Krasa, Rosalind, Satina, Velox). Two oil concentrations, 2% and 4% were applied. During the growing period, eight to nine oil treatments were applied at 7-day intervals. The effectiveness of rapeseed oils against PVY and PVM was much weaker than that of the mineral oil and for the susceptible cultivar the percentage infected tubers did not differ significantly from untreated crops. However, Olejan 85 EC deserves attention as it significantly reduced PVY infection across years in the more resistant cultivar, especially in the case of a lower concentration (2% vs. 4%). When there are no other means of protection to use on organic seed plantations, this oil can be used as an alternative, especially in the case of cultivars which are moderately resistant to PVY. A disadvantage of its application may be the fact that in some years symptoms of phytotoxicity on potato plants were recorded and a lowering of tuber yield.     

Assessing resistance types and levels to epidemic diseases from the analysis of disease progress curves: Principles and application to potato late blight

Both race-specific (RS) and race-non-specific (RNS) resistances exist in potato against the late blight pathogenPhytophthora infestans. Because these resistance types do not have the same epidemiological effects, their presence, alone or combined, in potato genotypes can be deduced from the analysis of disease progress curves from field experiments, a type of data commonly available to potato breeders, and their comparison with those of standard reference cultivars. The identification of RS resistance is based on the presence of a delay in epidemic onset compared to a susceptible cultivar, whereas the identification of RNS resistance is translated into a reduction of apparent infection rates. These parameters can be easily computed after linearization of the disease progress curves. This paper assesses the reliability of this identification using sets of experimental data, discusses its limitations, and highlights potential applications for breeding and cultivar assessment purposes.     

Growth of early potatoes from different portions of seed tubers II. Yield

Several of the recently released early-potato (Solanum tuberosum L.) cultivars used in Ontario have produced uneven stands which have been shown to be a result of delayed emergence from basal end seed pieces. A study was conducted to evaluate the effects of seed portions on the yield of three early potato cultivars, Jemseg, Superior and Yukon Gold. Yield of plants from basal seed pieces was lower than that from apical seed pieces or whole tubers for Jemseg and Yukon Gold during several sequential harvests. With Superior, cut seed portions yielded less than whole seed. Number of stems per plant was lower for basal plants of Jemseg. Tubers with strong apical dominance or dormancy such as Jemseg and Yukon Gold are prone to differences in yield among seed portions.     

The conservation of potato cultivars

Summary To prevent the loss of important genetic information cultivars are conserved in several collections of gene banks. In principal, there are two options for the medium to long-term storage of potato cultivars: storage as in vitro plantlets or microtubers and storage of meristems or shoot-tips in liquid nitrogen. In the Braunschweig potato cultivar collection, 360 cultivars are maintained under slow-growth conditions. Ten microplantlets of each cultivar are stored in test tubes containing filter paper bridges and 5 ml Murashige and Skoog (MS) liquid medium. The cultures were maintained at 10°C with a light intensity of 2 klux and 16 hours-day and can be stored under these conditions up to three years. Two hundred and forty-five cultivars are cryostored in liquid nitrogen. About 300 trimmed shoot-tips of each cultivar are incubated in MS-Towill-medium and then transferred into the cryoprotective solution. After an incubation time of about 2 hours trimmed shoot-tips fixed on an aluminium foil were put in cryo vials and stored in a container. The survival rate of the thawed, trimmed shoot-tips varies from 55%–100%. More important for a gene bank, however, is the plant regeneration. The average regeneration of all cultivars is about 40%.     

Assessment of PCR-based simple sequence repeats to fingerprint North American potato cultivars

Seven primer pairs flanking di- and tri-nucleotide repeat sequences, identified from previously sequenced regions of the potato genome, were examined for their potential use in DNA-fingerprinting of thirty-nineSolanum tuberosum subsp. tuberosum cultivars (released between 1861 and 1988) and one diploidS. phureja breeding line. Of the simple sequence repeats (SSRs), the primers for six SSRs amplified DNA sequences within the potato genome between cultivars for a total of 14 bands. The polymerase chain reaction (PCR)based amplification products generated from each primer pair consisted of 1 to 2 bands per cultivar but band variation among cultivars demonstrated up to 4 bands per SSR. A similarity matrix generated from five SSRs was able to distinguish 24 of the 40 cultivars. However, when the potato cultivars were grouped by tuber type (round white-skinned, long white-skinned, russetskinned, red-skinned, and yellow flesh) only five pairs of cultivars remained indistinguishable: Atlantic/Katahdin, Belchip/Wauseon, Red LaSoda/Bliss Triumph, Red Pontiac/Norland, and Burbank/Spunta. Although SSRs did not generate unique fingerprints for all of the North American genotypes examined, the potential to discriminate most cultivars should increase as additional SSRs are identified in potato.     

Assessment of Possibilities of Microtuber and in vitro Plantlet Seed Multiplication in Field Conditions. Part 1: PVY,PVM and PLRV Spreading

Currently in vitro plantlets and microtubers provide the basis for pre-base production of potato seeds, from which minitubers are produced under covers – they serve later as seed material to be planted in the field. The aim of the research was to determine the possibility for multiplication of material produced in vitro directly in field conditions. The research assessed PVY, PVM and PLRV infection of potato tubers derived from plants grown directly from in vitro plantlets, microtubers, minitubers and traditional seed potatoes planted in the field at different times. Moreover, testing in laboratory conditions, the susceptibility of these plants to virus infection was determined for the case of artificial inoculation of Myzus persicae and Aphis nasturtii. It was found that the infection of tubers derived from in vitro plantlets and microtubers was greater than that of seed potatoes and minitubers. Yet it seems that the reason for their higher infection level resulted not from the plant’s sensitivity or its greater attractiveness to aphids but from a largely unknown cause. Earlier planting of microtubers and in vitro plantlets in the field in case of the more resistant cultivar and certainly later in relation to the main time of planting had an impact on limiting the PVY and PVM infection of potato tubers. Hence multiplication of microtubers and in vitro plantlets in field conditions could be very economical using cultivars which are relatively resistant to viruses. However, adopting a later than usual planting period (end of June) and applying an additional protective cover (such as non-woven agricultural fabric) in the first period of a plant’s growth, promotes multiplication of microtubers and in vitro plantlets in field conditions for cultivars with low resistance levels.     

Analysis of <Emphasis Type="Italic">Potato Mop-Top Virus</Emphasis> Survival Probability in Post-Harvest Storage

Potato mop top virus (PMTV) induced necrosis can cause tuber quality loss at harvest and storage. Stored potatoes help maintain a constant supply of potatoes to the market and processing industry. PMTV-induced necrosis continues to develop during storage and appropriate timelines are needed for growers to make marketing decisions of their potatoes before incurring any significant quality losses. Survival analysis was used to estimate the time to event occurrence (PMTV-induced necrosis) in four (red-, russet-, white-, and yellow-skinned) potato market types across six post-harvest assessments conducted over two years. At each assessment the presence and absence of PMTV-induced necrosis was recorded and probability of tuber survival was estimated. Survival curves were significantly different among the four market type potato cultivars (Log-Rank test, P < 0.0005). Red- and russet-market type cultivars showed low and high survival probability, respectively, demonstrating that red cultivars need priority marketing. The survival probabilities decreased with increased storage time during both years, indicating that PMTV-induced necrosis development is dependent on potato cultivar and post-harvest storage. The median (50% of tubers with symptoms) survival times were estimated as 167 and 214 days for red- and other market type potato cultivars. The information from this study could potentially help growers regulate storage times for their cultivars to minimize tuber quality loss due to PMTV-induced tuber necrosis.     

Yukon Gold: A new yellow-fleshed,medium-early,high quality table and French-fry cultivar

Yukon Gold is a medium-early, yellow-fleshed potato cultivar with very good boiling, baking, and French-frying quality. It is not suitable for chips. In Ontario its yield is similar to Russet Burbank’s. Plants are susceptible to virus Y and slightly susceptible to virus leafroll but are resistant to mild mosaic. Tubers are moderately susceptible to common scab,Streptomyces scabies.     

Stability of disease expression in the potato late blight pathosystem: A preliminary field study

The interactions of four potato cultivars, with three isolates ofPhytophthora infestans were assessed in different environments and in different years. Preliminary tests with these cultivars and isolates were conducted in Toluca, Mexico, and Freeville, New York, U.S.A. in 1986 and 1987. Although data were available from only one year for cultivar Alpha, this cultivar had a dramatically different resistance ranking in Toluca, than that in Freeville — a result consistent with previous observations. The difference in resistance between two other cultivars also changed with site, but less dramatically and did not cause a change in resistance ranking. The resistance of the fourth cultivar appeared to be relatively unaffected by change in site. In both sites, all isolates ranked all cultivars in the same order. Although aggressiveness was slightly different in different locations and on different cultivars, variations were small and there were no consistent trends (consistent over all trials) concerning isolate aggressiveness. Thus, changes in location appeared to have different effects on the different cultivars but little or no effect on the isolates used.     

Effects of pest and soil management systems on potato diseases

Long-term cropping systems research is important in order to reduce production costs, to control crop pests, and to optimize the sustainability of agro-ecosystems. Soil amendment use, improved disease management practices, and careful cultivar choice are some of the potential components for improving potato production systems. This research was conducted in long-term cropping systems plots in order to evaluate the impact of soil amendments, pest management practices, and cultivar on foliar and soil-borne potato diseases and to assess the relationships of soil and pest management practices to disease levels and soil microbial activity. Fungicide applications for management of foliar diseases varied between the pest management systems (e.g., biological, reduced input, and conventional). Incidence of potato foliar diseases was quantified five times during the cropping season. The impact of soil amendment and pest management practices on soil microbial activity and tuber-borne diseases was also investigated. Low incidences of foliar and selected soil-borne diseases were recorded. Disease levels varied between years, cultivars, pest management, and soil amendments. Significant differences between cultivars were detected for early blight, white mold, and black dot. The cultivar Superior had higher incidence of white mold and black dot, while cv Atlantic had higher early blight incidence. Pest management system significantly affected foliar early blight incidence in 1998, but not in 1997. Pest management system did not affect late blight, white mold, or black dot incidence, or tuber disease incidence in either year. The addition of soil amendments significantly impacted tuber black dot incidences. Microbial activity responded to increasing temperature as the season progressed and was significantly enhanced by the addition of manure and compost soil amendments; however, lower disease incidence was not associated with increased microbial activity. While pest management practices were not major determinants of disease levels in these experiments, the results show that soil amendments can increase incidence of selected tuber diseases and microbial activity in soils.     

Effect of photoperiod and temperature on resistance againstPhytophthora infestans in susceptible and resistant potato cultivars: Effect on deposition of structural phenolics on the cell wall and resistance to penetration

Deposition of phenolic compounds before and after inoculation withPhytophthora infestans was evaluated in two Mexican cultivars (Malinche and Tollocan) with major unknown R genes for resistance to potato late blight, two cultivars (393295.236=CIP1 and 391046.22=CIP2) without R genes from the International Potato Center (CIP) and the susceptible cultivar Atlantic. Before inoculation, plants were grown in growth chambers at two temperatures (16 or 24 C) and two photoperiods (PPD 12 or 16 h day length). Forty-eight hours after inoculation, the number of penetrations was recorded and depositions of phenolic compounds were classified according to detection and location in (a) the anticlinal cell wall, (b) the whole cell, (c) the stomatal cells, and (d) without detectable depositions of phenolic compounds. The concentration of phenolic compounds in the epidermal cells was slightly increased at 16 C and 16 h PPD and penetration frequency was lower at 16 C (12 h PPD). Concentration of phenolic compounds was not correlated with penetration frequency, but was correlated with the resistance level of the different potato cultivars. Atlantic had the highest number of penetrations followed by Tollocan, CIP1, CIP2, and Malinche. The cytological observations indicated that four types of deposition of phenolic compounds occurred in all five potato cultivars irrespective of their type and level of resistance. These results suggest that deposition of phenolic compounds on epidermal cells is a general resistance mechanism in potato leaves that does not have a specific relation with resistance to the penetration ofP. infestans. Phenolic depositions were intrinsically similar in potato cultivars with and without R genes, which stresses the difficulty in differentiating between horizontal and vertical resistance.     

Cultivation Practices and Potato Cultivars Suitable for Organic Potato Production

To identify the most important agronomic measures and cultivar traits in Swedish organic potato production, multivariate analyses were performed on a set of data from a series of field trials carried out in Sweden during a 7-year period. The effects of soil parameters, cultivar, year and geographical location on potato characteristics were investigated. Soil parameters including fertility level had strong and significant effects on potato characteristics, explaining 53% of total variation. Variables related to the duration of haulm growth were other dominant factors in the variation. While P and K fertilization increased yields, N fertilization had little effect on yield and a negative effect on the time to emergence. The N requirement of potatoes ranges from 2.5 to 5.9 kg ha^?1 per ton of tuber yield and was met in these trials. The results implied the timing of N application is important for yield. It was concluded that the importance of P and K fertilization is underestimated in organic production, and that the most important cultivar trait in achieving acceptable yield is long-lasting foliage, which is a characteristic of cultivars resistant to Phytophthora infestans. Three of the cultivars tested (Lady Balfour, Cicero and Sarpo Mira) had a yield >3.5 kg m^?2, which is high in Swedish organic production.