鸡大肠杆菌iss基因的克隆测序及原核表达

本实验对鸡大肠杆菌O2血清型菌株进行iss基因克隆测序，并在此基础上设计出两对套式引物，分别对含信号肽Miss基因序列和不含信号肽Miss基因序列进行扩增，并与原核表达载体pGEX-6p-1连接进行原核表达。iss基因克隆测序的结果与两组国外发表Miss基因序列进行比对，其同源性达100％。SDS—PAGE鉴定显示融合蛋白获得了较理想的表达，融合蛋白分子量分别约为36kD和33kD。     

Iss from a virulent avian Escherichia coli

No single characteristic of virulent avian Escherichia coli has been identified that can be exploited in colibacillosis detection protocols. Research in our lab suggests a strong association between the presence of an iss DNA sequence with an isolate's disease-causing ability. The study presented here focuses on the techniques used in the expression, purification, and characterization of avian E. coli Iss protein. In brief, iss was cloned into an expression vector, the construct was transformed into a protease-deficient E. coli, and expression was induced. The protein was expressed as a glutathione-S-transferase (GST) fusion and purified by affinity chromatography. The GST portion was cleaved from Iss, Iss was harvested by affinity chromatography, and the identity of Iss was confirmed by N-terminal sequencing. Currently, purified Iss is being used to prepare hybridomas for production of monoclonal antibodies with the goal of evaluating anti-Iss as a reagent for the detection of virulent avian E. coli.     

鸡致病性大肠杆菌1型菌毛fiml基因克隆与序列测定

对鸡O2血清型致病性大肠杆菌1型菌毛fimI基因进行了扩增并与国外同源菌株基因序列进行了比较.结果表明:两者核苷酸同源性达98.42%,预测氨基酸顺序同源性达98.92%.fimI基因的预测氨基酸序列中仅第46位氨基酸由ALA变为THR,第76位氨基酸由SER变为ALA,其余核苷酸的变化未影v向氨基酸的翻译.推测,这种改变是由分离株的差异所引起的.     

不同禽源副黏病毒分离株F基因的克隆与序列分析

分别对鸡源、鸭源、鹅源新城疫病毒(NDV)强毒分离株(WF00C、WF00D、WF00G)的F基因进行RT-PCR扩增、克隆和序列测定,并对其核苷酸和推导氨基酸序列进行分析.结果表明,各分离株F基因均含1个完整的开放阅读框(ORF),全长为1662 bp,编码553个氨基酸,有6个潜在的糖基化位点,裂解位点区的氨基酸序列均为112R-R-Q-K-R-F117,与强毒株特征相符,具有第101位的K(赖氨酸)和121位的V(缬氨酸),符合基因VK型NDV特征;WF00C株有13个半胱氨酸(Cys)残基,WF00D株和WF00G株各有12个Cys残基;在限制性内切酶(RE)位点(nt334～1682)的分布上,3个毒株均存在多数鹅源分离株特有的973 nt和1249 nt Rsa Ⅰ位点;WF00D株与WF00C株、WF00G株以及GenBank的15株各基因型代表株的F基因编码区同源性进行比较,其核苷酸序列同源性为84.7 %～99.3%,推导的氨基酸序列同源性为88.4%～98.9%;3个分离株间的同源性较高,其与ZJ1、SF02和NA_1等鹅源毒株之间差异较小,而与LaSota、F48E9等毒株之间差异明显.根据NDV系统发育进化树、酶切位点分析以及基因分型结果,证明它们的基因型均为Ⅶd亚型.     

papA gene of avian pathogenic Escherichia coli

P fimbrial adhesins may be associated with the virulence of avian pathogenic Escherichia coli (APEC). However, most APECs are unable to express P fimbriae even when they are grown under conditions that favor P fimbrial expression. This failure can be explained by the complete absence of the pap operon or the presence of an incomplete pap operon in Pap-negative APEC strains. In the present study, we analyzed the pap operon, specifically the papA gene that encodes the major fimbrial shaft, to better understand the pap gene cluster at the genetic level. First, by PCR, we examined a collection of 500 APEC strains for the presence of 11 genes comprising the pap operon. Except for papA, all the other genes of the operon were present in 38% to 41.2% of APEC, whereas the papA was present only in 10.4% of the APEC tested. Using multiplex PCR to probe for allelic variants of papA, we sought to determine if the low prevalence of papA among APEC was related to genetic heterogeneity of the gene itself. It was determined that the papA of APEC always belongs to the F11 allelic variant. Finally, we sequenced the 'papA region' from two papA-negative strains, both of which contain all the other genes of the pap operon. Interestingly, both strains had an 11,104-bp contig interruptingpapA at the 281-bp position. This contig harbored a streptomycin resistance gene and a classic Tn10 transposon containing the genes that confer tetracycline resistance. However, we noted that the papA gene of every papA-negative APEC strain was not interrupted by an 11,104-bp contig. It is likely that transposons bearing antibiotic resistance genes have inserted within pap gene cluster of some APEC strains, and such genetic events may have been selected for by antibiotic use.     

致病性鸡大肠杆菌typel菌毛fimC基因的克隆与序列测序

根据国外发表的人致病性大肠杆菌fimC基因序列,在其保守区设计了带有BamHⅠ/HindⅢ酶切位点的一对引物,应用PCR技术以鸡致病性大肠杆菌02基因组DNA为模板扩增到一个片段,大小约为700kp,将扩增产物克隆到pMD18-T载体上,并转化于大肠杆菌TG1宿主菌,经酶切和筛选,得到阳性重组质粒。通过对阳性重组质粒核酸序列测定,确定此DNA片段为鸡大肠杆菌fimC基因。     

致病性鸡大肠杆菌type1菌毛fimC基因的克隆与序列测定

根据国外发表的人致病性大肠杆菌fimC基因序列,在其保守区设计了带有BamHⅠ/HindⅢ酶切位点的一对引物,应用PCR技术以鸡致病性大肠杆菌O2基因组DNA为模板扩增到一个片段,大小约为700bp,将扩增产物克隆到pMD18-T载体上,并转化于大肠杆菌TG1宿主菌,经酶切和筛选,得到阳性重组质粒.通过对阳性重组质粒核酸序列测定,确定此DNA片段为鸡大肠杆菌fimC基因.     

禽致病性大肠杆菌ibeA基因缺失及其特性分析

运用大肠杆菌Red同源重组系统,对禽致病性大肠杆菌(Avian pathogenic Escherichia coli,APEC)DE02株的ibeA基因进行了缺失,其结果为揭示IbeA的功能奠定了基础.通过对APEC ibeA基因缺失株与人脑微血管内皮细胞(Human brain microvascular endothelial cells,HBMECs)的黏附与侵袭,发现ibeA基因缺失后与HBMECs的黏附率为45%,侵袭率为1.2%,相对于野生型APEC均显著降低;提示ibeA基因是APEC的重要致病因子.     

猪源大肠杆菌fedA基因的克隆及鉴定

断奶仔猪腹泻（post—weaning diarrhea,PWD）和猪水肿病（porcine edema disease,ED）是导致仔猪死亡的重要传染性疾病。PWD和ED分别由肠毒素大肠杆菌（enterotoxigenic Escherichia coli,ETEC）和志贺氏毒素大肠杆菌（verotoxigenic Escherichia coli,VTEC）引起。ETEC和VTEC等病原菌除了产生毒素外,还同时具有菌毛粘附因子。F18菌毛是病原菌主要的粘附因子,介导细菌对小肠黏膜上皮细胞表面受体的粘附,在PWD和ED的发生中起着决定性的作用,是引起疾病的主要毒力因子之一。     

Cloning and expression of a pili gene of Corynebacterium renale in Escherichia coli

A plasmid gene library of Corynebacterium renale piliated strain No. 109P+ was prepared in Escherichia coli in order to study the chemical structure of the pili of C. renale. Of 3,000 recombinant clones tested, 5 reacted with anti-pili anti-serum. The gene products of these clones reacted with anti-pili monoclonal antibodies 8/4, 5/2 and B20/3 but lacked the reactivity with 13/4. SDS-PAGE analysis revealed that the expressed protein had a molecular mass of 48 kilodalton and deletion analysis showed that the encoding region for this protein was localized within a 1.4 kilobase gene including a promoter sequence. Immunoelectron microscopy showed that mouse antibodies raised to the expressed protein bound to the entire surface of the pili of C. renale. These results indicate that the cloned gene encodes a major structural protein of C. renale pili.     

Failure of the Congo red dye uptake test to discriminate between virulent and avirulent avian Escherichia coli.

Twenty avian Escherichia coli isolates from normal and diseased chickens were compared by use of three virulence tests. These tests included the uptake of Congo red dye, an embryo lethality test, and a quantitative microtiter complement resistance test. A direct correlation was seen between the results of the complement resistance test and the embryo lethality test. The results of the Congo red test did not correlate with the two other tests.     

Resistance to Serum Complement,iss, and Virulence of Avian Escherichia coli

Control of avian colibacillosis is hampered by lack of easily identifiable markers for virulent Escherichia coli. Resistance to serum complement appears to be a widespread trait of virulent avian E. coli, suggesting that bacterial factors promoting survival in serum may be useful in discriminating between virulent and avirulent isolates. Such distinguishing factors may prove useful in diagnostic protocols or as targets in future colibacillosis control protocols. Interestingly, the factors responsible for resistance to complement differ in the E. coli isolated from mammalian and avian hosts, which may reflect differences in the nature of avian and mammalian colibacillosis. In some cases, genetic determinants for serum complement resistance in avian E. coli are found on aerobactin- or Colicin V-encoding plasmids. One such gene, iss, first described for its role in the serum resistance associated with a ColV plasmid from a human E. coli isolate, occurs much more frequently in isolates from birds with colibacillosis than in faecal isolates from healthy birds. Efforts to identify the genomic location of iss in a single, virulent avian E. coli isolate have revealed that it occurs in association with several purported virulence genes, all linked to a large conjugative R plasmid. At this time, it is not known whether iss merely marks the presence of a larger pathogenicity unit or is itself a contributor to virulence. Nevertheless, the presence of the complement-resistance determinant, iss, may be a marker of virulent avian E. coli exploitable in controlling avian colibacillosis.     

箭箸豌豆甘油醛-3-磷酸脱氢酶基因片段的克隆及序列分析

本研究预期通过同源克隆获得了箭菩豌豆(Vicia sativa)甘油醛-3-磷酸脱氢酶(GAPDH)基因的部分片段,为研究箭菩豌豆适应高海拔环境的分子机制奠定基础.根据近缘物种GAPDH基因序列设计1对引物,通过RT-PCR技术克隆获得了一段长度1141 bp的序列.生物信息学分析表明,该序列编码的381个氨基酸,与其...     

Prediction of chicken embryo lethality with the avian Escherichia coli traits complement resistance,colicin V production,and presence of the increased serum survival gene cluster (iss)

Differentiating between virulent and avirulent avian Escherichia coli isolates continues to be a problem for poultry diagnostic laboratories and the study of colibacillosis in poultry. The ability of a laboratory to conduct one simple test that correlates with virulence would simplify studies in these areas; however, previous studies have not enabled researchers to establish such a test. In this study, the occurrence of certain phenotypic and genotypic traits purported to contribute to avian E. coli virulence in 20 avian E. coli isolates was correlated with the results of embryo challenge studies. This analysis was undertaken in an effort to determine which trait(s) best identified each avian E. coli isolate as virulent or avirulent. Traits selected were complement resistance, production of colicin V (ColV), motility, type F1 pili expression, presence of the temperature-sensitive hemagglutinin gene (tsh), and presence of the increased serum survival genetic locus (iss). ColV production, complement resistance, and presence of the iss genetic element were the three traits most highly correlated with high embryo lethality. A logistic regression model was used to predict the embryo lethality results on the basis of the most frequent isolate characteristics. Results indicate that ColV, complement resistance, and if are significant predictor variables for the percentage of embryo lethality resulting from challenge with a specific avian E. coli isolate. However, no single trait has the ability to predict virulent isolates 100% of the time. Such results suggest the possibility that the embryo lethality assay may prove to be the one test needed to determine if an avian E. coli isolate is virulent.     

鸭Ⅰ型禽副粘病毒YH99V株HN基因的克隆和序列分析

在浙江地区进行鸭病病因的调查过程中，从患病鸭群中分离到一株引起鸭产蛋锐减而不死亡的病毒，经鉴定该病毒属于禽副粘病毒Ⅰ型，命名为YH99V株。以YH99V株的基因组RNA为模板，通过RT—PCR一步法扩增出其HN基因的cDNA片段，然后将其克隆至pMD18-T载体中，对其进行序列测定。测序后拼接出HN基因的序列长度为1785bp，该基因的ORF总长为1734bp，编码577个氨基酸。将YH99V株HN基因序列和推导的氨基酸序列与新城疫毒株的HN基因相应序列比较后发现，它们的核苷酸序列同源性分别在82．1％～99．7％，氨基酸序列同源性为87．2％～99．5％。在同源性比较的基础上，进一步绘制了Ⅰ型禽副粘病毒株HN基因的系统发育树。这对于Ⅰ型禽副粘病毒毒力基因的功能分析和该病的分子流行病调查有着重要的意义。     

禽致病性大肠杆菌pilA基因的克隆及其在乳酸菌中的表达

根据GenBank中禽致病性大肠杆菌pilA基因序列设计合成1对引物,以本实验室分离的禽致病性大肠杆菌基因组DNA为模板,采用PCR技术扩增得到pilA基因片段,经测序鉴定准确后将其克隆到乳酸乳球菌表达载体pMG36e中,构建重组质粒并将其电转入乳酸乳球菌MG1363,得到重组乳酸乳球菌。SDS-PAGE分析显示,表达的蛋白约为19 ku,与预期相符。Western blot进一步证实了该蛋白的免疫反应性。     

Cloning and comparison of heat-stable enterotoxin genes from Escherichia coli strains of bovine, porcine, and avian origins

The Ent plasmid encoding Escherichia coli heat-stable enterotoxin (ST) isolated from bovine, porcine, and avian strains were used for the cloning of ST genes. The ST+ DNA regions were finally cloned into pBR322 as the 1.75 kilobases PstI fragment. The electron microscopic analysis of self-annealed molecules indicated that ST+ recombinant plasmid had a stem-loop structure of a size the same as that observed in their wild type Ent plasmids. The stem-loop structures and the restriction enzyme cleavage mappings indicated that 4 kinds of ST genes cloned in this experiment may be identical to Tn1681. The ST production levels of the recombinant plasmids were higher than those of the original plasmids.     

Virulence factors of avian Escherichia coli

A total of 45 strains of Escherichia coli isolates from chickens with colisepticemia were examined for virulence factors commonly found in pathogenic groups of E. coli. These strains were studied for the following: pathogenicity in 1-day-old chicks; toxin, hemolysin, and colicin production; cell invasiveness and adherence; hemagglutination for fimbriae detection; serum resistance; aerobactin production in iron-limited conditions; and plasmid content. The characteristics exhibited by virulent strains were invasion for HeLa and chicken fibroblast cells, serum resistance, colicin V, and aerobactin production. None of the isolates were toxigenic or positive in hemagglutination tests. The molecular genetic studies of the virulence factors by agarose electrophoresis showed that the plasmids of these strains are of high molecular weight.     

地高辛标记大肠杆菌1型菌毛结构基因核酸探针对鸡大肠杆菌分离株的检测

将PCR扩增的鸡大肠杆菌 1型菌毛蛋白结构基因 (pilA)用地高辛标记成核酸探针与分属 2 8个血清型的 50个鸡大肠杆菌分离株进行斑点杂交 ,阳性率达 84% ,用甘露糖敏感血凝试验 (MSHA)检测阳性率为 72 % ,表明核酸杂交比MSHA法更敏感。