Vernalization gene combination to maximize grain yield in bread wheat (Triticum aestivum L.) in diverse environments

The major vernalisation genes of VRN1 are well understood at the molecular level. However, their quantitative contributions to flowering time and grain yield related traits are not clear. In this study, we used a double haploid population (225 lines) of Westonia × Kauz in which the Vrn-A1a (Westonia), Vrn-B1a (Westonia) and Vrn-D1a (Kauz) were segregating, and a high resolution genetic map of 1,159 loci, to determine the quantitative contributions of Vrn-A1a, Vrn-B1a and Vrn-D1a for the days to anthesis and grain yield related traits in diverse environments. The major quantitative trait loci (QTL) of spikelet number per spike and days to anthesis were contributed by the winter alleles of VRN1. The QTL of the time of grain filling were contributed by the spring alleles of VRN1. The wild genotype (vrn-A1vrn-B1vrn-D1) showed the latest flowering, the highest spikelet number per spike, lowest peduncle proportion and thousand grain weight in three environmental analyses, and the largest spikelet number per spike, which resulted in high kernel number per spike (KN) and grain weight (GW) in well-watered environments. One QTL of KN was located on 5B, contributed by winter allele of vrn-B1 in three environmental analyses, and one GW QTL was detected on 5A, contributed by the spring allele of Vrn-A1a in a drought environment. The results indicated that the genotype Vrn-A1avrn-B1Vrn-D1a would shorten the time to anthesis and give high GW and KN in drought environments. The early anthesis associated phenotype, peduncle proportion would provide an indicator in breeding programs.     

Relative performance of Canadian spring wheat cultivars under organic and conventional field conditions

Producing higher yields under organic conditions is generally hampered by weeds and lesser nutrient supply. In wheat certain adaptive traits like early season vigour, taller plants, and shorter life cycle have been reported to help plants compete with weeds and produce satisfactory yields. In this experiment we tested the hypothesis ‘that early flowering and maturity conferred by insensitive vernalization alleles Vrn-A1a and/or Vrn-B1 has a yield advantage under organic conditions’ in Canadian spring wheat germplasm. We genotyped 32 cultivars for their vernalization gene composition (Vrn-A1a, Vrn-B1 and Vrn-D1) and studied these cultivars in organic and conventional management systems. We found 88 % of the cultivars possessed vernalization (Vrn) insensitive allele Vrn-A1a either alone or in combination with Vrn-B1. There were no differential affects between the cultivars having insensitive Vrn allele at either single locus (Vrn-A1a) or two (Vrn-A1a, Vrn-B1) under organic and conventional field conditions; except for days to maturity, where cultivars having only Vrn-A1a allele matured earlier. This earlier maturity did not translate to any yield advantage under organic field conditions. Overall, the cultivars grown under organic conditions were earlier flowering, lower yielding with lower test weight compared to the conventional management system. Significant cultivar × environment interactions were found for grain yield, grain protein content and grain fill rate. For grain protein content, cross-over interactions of the cultivars between the management systems were observed. Three cultivars (Marquis, Unity and Minnedosa) exhibited minimal comparative loss in grain yield and grain protein content under organic field conditions, and hence could potentially serve as parents for organic wheat breeding programs.     

Effect of VRN‐1 and PPD‐D1 genes on heading time in European bread wheat cultivars

The variation of the vernalization (VRN‐1) and photoperiod (PPD‐1) genes offers opportunities to adjust heading time and to maximize yield in crop species. The effect of these genes on heading time was studied based on a set of 245 predominantly spring cultivars of bread wheat from the main eco‐geographical regions of Europe. The genotypes were screened using previously published diagnostic molecular markers for detecting the dominant or recessive alleles of the major VRN‐1 loci such as: VRN‐A1, VRN‐B1, VRN‐D1 as well as PPD‐D1. We found that 91% of spring wheat cultivars contain the photoperiod sensitive PPD‐D1b allele. Photoperiod insensitive PPD‐D1a allele has been found mainly in southern region of Europe. For this region the monogenic control of vernalization by VRN‐B1 or VRN‐D1 dominant alleles is common, whereas in the remaining part of Europe, the combination of photoperiod sensitive PPD‐D1b allele with dominant VRN‐A1, VRN‐B1 and recessive vrn‐D1 alleles represents the most frequent genotype. Also, we revealed a significantly later (5–8 days) heading of the monogenically dominant genotypes at VRN‐B1 as compared to the digenic VRN‐A1 VRN‐B1 genotypes.     

Identifying AFLP and microsatellite markers for vernalization response gene Vrn-B1 in hexaploid wheat using reciprocal mapping populations

Marker‐assisted selection may be useful for combining specific vernalization response (Vrn) alleles into a single wheat genotype for yield enhancement; however, DNA markers are only available for two of the three genes identified to date. The objectives of this study were to investigate reciprocal effects on days to heading using F₂ populations generated by cross‐hybridizing near‐isogenic lines (NILs) carrying spring (Vrn‐B1; TDB) and winter (vrn‐B1; TDC) alleles, and to identify markers linked to Vrn‐B1 through genetic linkage analysis. Heading data were recorded for 91 and 89 progeny from reciprocal mapping populations TDB/TDC and TDC/TDB, respectively, and significant (P < 0.0001) reciprocal and dominance effects were detected. Among 207 amplified fragment length polymorphisms primer pairs and seven wheat microsatellite markers screened, two and one, respectively, were linked distally to Vrn‐B1 on wheat chromosome 5BL. Microsatellite Xgwm408 was most closely linked to Vrn‐B1 at 3.9 and 1.1 cM in the TDB/TDC and TDC/TDB map, respectively. Reciprocal differences in recombination distances emphasize the importance of female parent choice when generating mapping populations. Molecular markers are now available for three Vrn loci in wheat.     

Genetic and Molecular Characterization of Vernalization Genes Vrn‐A1, Vrn‐B1, and Vrn‐D1 in Spring Wheat Germplasm from the Pacific Northwest Region of the U.S.A.

The objective of this study was to determine the Vrn‐1 allelic composition of spring wheat germplasm from the Pacific Northwest region of the USA. Individual plants from 56 spring wheat lines were crossed to near‐isogenic tester lines carrying the dominant allele Vrn‐A1, Vrn‐B1 or Vrn‐D1. F₂ progeny were evaluated for growth habit in the field and Vrn‐1 allelic composition was determined through chi‐square analysis. Lines also were analysed with DNA sequence‐based Vrn‐1 allele‐specific markers. A majority of the germplasm carried the dominant allele Vrn‐A1a alone or in combination with Vrn‐B1, Vrn‐D1 or Vrn‐B3 alleles. Vrn‐B1 and Vrn‐D1 were almost always associated with other dominant Vrn‐1 allele(s). Based on DNA sequence analysis, a novel Vrn‐B1 allele referred to as Vrn‐B1b, which carried a single nucleotide polymorphism (SNP) and a 36 bp deletion, was identified in cultivar ‘Alpowa’. These results will be useful to wheat breeders for choosing parents with different Vrn‐1 alleles for crossing to maximize diversity at the Vrn‐1 loci with an expectation of identifying superior Vrn‐1 allelic combinations for cultivar improvement.     

Molecular examination and genotype diversity of vernalization sensitivity and photoperiod response in old and modern bread wheat cultivars grown in Iran

Understanding the genetic factors governing developmental patterns and flowering time in breeding materials is required for the development of new wheat varieties for a specific environment. Iran is among the largest wheat producers in the arid and semi-arid regions of the Middle East and North Africa. The wheat germplasm grown in Iran is either developed nationally or is introduced from the CIMMYT global wheat program. For decades, the wheat breeding program in Iran focused on generating new varieties better able to grow in the predominant Iranian climatic conditions such as humidity at the reproductive stage, high temperature during reproductive stages (terminal heat stress), moderate temperature during the cropping season, and high probability of frost damage during early stages of growth. There have also been sub-programs aimed at developing drought and salinity-tolerant wheat cultivars in Iran. Knowledge of cultivars’ growth habits in Iran is currently limited to flowering in spring-sown nurseries. We identified allelic diversity in loci involved in vernalization response (Vrn) and photoperiod sensitivity (Ppd) in 60 bread wheat cultivars developed in Iran, CIMMYT, or ICARDA. This study revealed that the spring growth habit observed in most of the cultivars is conferred by a combination of recessive vrn-A1 and dominant Vrn-D1, Vrn-B1, and/or Vrn-B3 loci. This implies that most of the cultivars have minimal vernalization requirements for overwintering. Perhaps cold winters, even in the southern regions of Iran, provide sufficient vernalization conditions for cultivars possessing the recessive vrn-A1 allele. The germplasm investigated in this study revealed no evidence indicating selection for or against any specific Vrn and Ppd allele in our wheat breeding program.     

Temperature as a component of the expression of developmental responses in wheat

Summary Studies were made of days to ear emergence under the constant temperatures of 9, 14, 19 and 25°C and 16 h photoperiod in three sets of wheat lines each possessing genotypes differing for developmental responses.Days to ear emergence in three near-isogenic lines of the wheat cultivar Triple Dirk, which differed for vernalization response, increased as the strength of the response increased. At the four temperatures Triple Dirk D (Vrn 1 vrn 2) was not significantly different from normal Triple Dirk (Vrn 1 Vrn 2) but Triple Dirk B (vrn 1 Vrn 2) was significantly (P=0.01) later than normal Triple Dirk at each temperature. This indicates that the vrn 1 allele confers stronger vernalization response than vrn 2 over the range of temperatures (9–24°C). However, Triple Dirk C (vrn 1 vrn 2) failed to head after 120 days at each temperature indicating strong interaction between vrn 1 and vrn 2 with each other (and possibly the Triple Dirk back-ground) to give a much stronger vernalization response than predictions from additivity of their individual effects.The second set comprised the four Chinese Spring/Thatcher chromosome substitution lines CS/T 3B, 6B, 7B and 5D, plus Chinese Spring and Thatcher, and were grown in the unvernalized condition. CS/T 5D was similar in days to ear emergence as Chinese Spring at all four temperatures but the other three lines were earlier to ear emergence, particularly as the temperature increased. Days to ear emergence was fastest at 14°C in all lines, except CS/T 3B, in which it decreased progressively from 9 to 24°C.The third set of Chinese Spring and Thatcher and the homoeologous group 2 chromosomes of Thatcher substituted in Chinese Spring, the group which is considered to be involved in the control of photoperiod sensitivity. The three substitution lines responded differently to temperature compared with Chinese Spring and with each other, with chromosome 2D being the least, and chromosome 2B the most, responsive to temperature.     

SNPs and an insertion sequence in five Wx-A1 alleles as factors for variant Wx-A1 protein in wheat

The waxy (Wx) gene encodes a granule-bound starch synthase (also called Wx protein) that is involved in synthesizing amylose in the starch grains of cereals, including common wheat (Triticum aestivum L.). Because amylose content affects the quality of food products made from wheat flour, Wx alleles affecting amylose content are of interest. Five wheat Wx alleles (Wx-A1c, -A1d, -A1e, -A1i and -A1j) that produce polymorphic Wx proteins on electrophoretic gels were investigated in terms of amylose content in starch and DNA sequences. Measurement and electrophoresis of gelled starch showed that apparent amylose contents of the genotypes were as follows: Wx-A1e, 2.9 % (= waxy phenotype) < -A1i, 8.0 % < -A1c, 16.8 % < -A1j, 22.6 % = level of wild type allele -A1a. DNA sequencing of the five alleles identified single nucleotide polymorphisms (SNPs) and insertion/deletion variations compared to Wx-A1a. A particular SNP causing amino acid changes in Wx-A1e and -A1c was identified as the factor responsible for decreased amylose. A SNP in Wx-A1d should cause an amino acid change and be responsible for an altered Wx-A1d protein. A transposable-like element of 376 bp present in the 3′ untranslated region (UTR) of Wx-A1i most likely lowered the levels of Wx protein and amylose through aberrant mRNA. The fifth allele, Wx-A1j, possessed four SNPs, two of which altered amino acids in the Wx-A1j protein and should cause polymorphism in the Wx protein. Based on the DNA sequences, functional markers for Wx-A1c, -A1d, -A1e and -A1i were developed.     

Evaluation of cold hardiness in two sets of near-isogenic lines of wheat (Triticum aestivum) with polymorphic vernalization alleles

In wheat, variation at the orthologus Vrn‐1 loci, located on each of the three genomes, A, B and D, is responsible for vernalization response. A dominant Vrn‐1a allele on any of the three wheat genomes results in spring habit and the presence of recessive Vrn‐1b alleles on all three genomes results in winter habit. Two sets of near‐isogenic lines (NILs) were evaluated for DNA polymorphisms at their Vrn‐A1, B1 and D1 loci and for cold hardiness. Two winter wheat cultivars, ‘Daws’ and ‘Wanser’ were used as recurrent parents and ‘Triple Dirk’ NILs were used as donor parents for orthologous Vrn‐1 alleles. The NILs were analysed using molecular markers specific for each allele. Only 26 of 32 ‘Daws’ NILs and 23 of 32 ‘Wanser’ NILs had a plant growth habit that corresponded to the marker genotype for the markers used. Freezing tests were conducted in growth chambers programmed to cool to ?21.5°C. Relative area under the death progress curve (AUDPC), with a maximum value of 100 was used as a measure of death due to freezing. The average relative AUDPC of the spring habit ‘Daws’Vrn‐A1a NILs was 86.15; significantly greater than the corresponding winter habit ‘Daws’Vrn‐A1b NILs (42.98). In contrast, all the ‘Daws’Vrn‐A1bVrn‐B1aVrn‐D1b and Vrn‐A1bVrn‐B1bVrn‐D1a NILs (spring habit) had relative AUDPC values equal to those of their ‘Daws’ sister genotypes with Vrn‐A1bVrn‐B1bVrn‐D1b NILs (winter habit). The average AUDPC of spring and winter habit ‘Wanser’ NILs differed at all three Vrn‐A1, Vrn‐B1 and Vrn‐D1 locus comparisons. We conclude that ‘Daws’ and ‘Wanser’ have different background genetic interactions with the Vrn‐1 loci influencing cold hardiness. The marker for Vrn‐A1 is diagnostic for growth habit and cold hardiness but there is no relationship between the Vrn‐B1 and Vrn‐D1 markers and the cold tolerance of the NILs used in this study.     

Reduced height genes and their importance in winter wheat cultivars grown in southern Russia

Reduced height genes are the genetic basis of the “green revolution”. Two agronomically important gibberellic acid (GA)-insensitive genes, Rht-B1b (Rht1) and Rht-D1b (Rht2), localised on chromosomes 4BS and 4DS, respectively, and the GA-responsive gene Rht8, localised on chromosome 2DS, were introduced into many cultivars worldwide. An alternative GA-insensitive gene Rht-B1e (=Rht11) was introduced into Russian wheat cultivars. In this study, we investigated the importance of Rht-B1b, Rht-B1e, Rht-D1b and Rht8 in south Russian bread wheat cultivars. The cultivars were divided into five groups: (1) Rht8c; (2) Rht-B1b; (3) Rht-B1b, Rht8; (4) Rht-B1e, Rht8; and (5) Rht-D1b, Rht8. In the Krasnodar region of south Russia 3,222,321 ha were evaluated for estimating the commercial value of each of these genes in 2009–2011. The results showed that coupling Rht-B1e with Rht8 or Rht-B1b with Rht8 was more successful compared with the effects of other genes or their combinations. The average yield of cultivars carrying Rht-B1e exceeded the average yield of cultivars from the other groups. Our study demonstrates that Rht-B1e can be recommended for use in breeding programs and the presence of a molecular marker for this allele simplifies its transfer to elite wheat germplasm.     

Effect of alien 5R(5A) chromosome substitution on ear-emergence time and winter hardiness in wheat-rye substitution lines

Ear emergence time and response to vernalization were investigated in 12 alien substitution lines in which a pair of chromosomes 5A of recipient spring wheat cultivars was replaced by a pair of chromosomes 5R of Siberian spring rye ‘Onokhoiskaya’. The recipients were 12 spring cultivars of common wheat, each carrying different Vrn genes. Spring rye ‘Onokhoiskaya’ had the Sp1 (now called Vrn-R1) gene for spring growth habit located on chromosome 5R, but its expression was weaker. The Vrn-R1 gene had no effect on growth habit, ear emergence time and response to vernalization in wheat-rye substitution lines. Ears emerged significantly later in the 5R(5A) alien substitution lines than in the recipient wheat cultivars with the Vrn-A1/Vrn-B1/vrn-D1 or Vrn-A1/vrn-B1/Vrn-D1 genotypes. No difference in ear emergence time was found between most of the 5R(5A) alien substitution lines and the cultivars carrying the recessive vrn-A1 gene. The presence of the Vrn2a and Vrn2b alleles at the Vrn2 (now called Vrn-B1) locus located on wheat chromosome 5B was confirmed.The replacement of chromosome 5A by chromosome 5R in wheat cultivars ‘Rang’ and ‘Mironovskaya Krupnozernaya’, which carries the single dominant gene Vrn-A1, converted them to winter growth habit. In field studies near Novosibirsk the winter hardiness of 5R(5A) wheat–rye substitution lines of ‘Rang’ and ‘Mironovskaya Krupnozernaya’ was increased by 20–47% and 27–34%, respectively, over the recurrent parents.     

Distribution of photoperiod-insensitive allele Ppd-A1a and its effect on heading time in Japanese wheat cultivars

The Ppd-A1 genotype of 240 Japanese wheat cultivars and 40 foreign cultivars was determined using a PCR-based method. Among Japanese cultivars, only 12 cultivars, all of which were Hokkaido winter wheat, carried the Ppd-A1a allele, while this allele was not found in Hokkaido spring wheat cultivars or Tohoku-Kyushu cultivars. Cultivars with a photoperiod-insensitive allele headed 6.9–9.8 days earlier in Kanto and 2.5 days earlier in Hokkaido than photoperiod-sensitive cultivars. The lower effect of photoperiod-insensitive alleles observed in Hokkaido could be due to the longer day-length at the spike formation stage compared with that in Kanto. Pedigree analysis showed that ‘Purple Straw’ and ‘Tohoku 118’ were donors of Ppd-A1a and Ppd-D1a in Hokkaido wheat cultivars, respectively. Wheat cultivars recently developed in Hokkaido carry photoperiod-insensitive alleles at a high frequency. For efficient utilization of Ppd-1 alleles in the Hokkaido wheat-breeding program, the effect of Ppd-1 on growth pattern and grain yield should be investigated. Ppd-A1a may be useful as a unique gene source for fine tuning the heading time in the Tohoku-Kyushu region since the effect of Ppd-A1a on photoperiod insensitivity appears to differ from the effect of Ppd-B1a and Ppd-D1a.     

Waxy proteins and amylose content in diploid Triticeae species with genomes A, S and D

A collection of 89 accessions of diploid species of wheat was analysed for waxy protein in the grain: 39 accessions of Einkorn wheats, 41 accessions of Sitopsis section wheat and nine accessions of Triticum tauschii. The electrophoretic patterns showed low polymorphism. In each group of wheat, a single and different allele was detected. In accessions of Einkorn wheats that allele had a similar electrophoretical mobility to the Wx‐A1a allele of the bread wheat ‘Chinese Spring’, in accessions of the Sitopsis section it had a similar mobility to that of the Wx‐B1f allele of tetraploid wheat, and in the accessions of T. tauschii, it was similar to the Wx‐D1a allele of the bread wheat ‘Chinese Spring’. The accessions were also analysed for apparent amylose content. Results showed that amylose content ranged from 22 to 35% in Einkorn wheats, from 28 to 41% in the Sitopsis section and from 26 to 35% in accessions of T. tauschii.     

Adaptation and ecological differentiation in wheat with special reference to geographical variation of growth habit and Vrn genotype

Geographical variation of growth habit was studied for 749 landraces from various parts of the world, with special reference to their adaptation and ecogeographical differentiation. The total frequency of spring‐type landraces was 49.9%, and varied between localities. Spring‐type landraces were frequent in two distinct areas where the average January temperature was either below ‐7°C or above 4°C, with winter‐type landraces in areas from ‐7°C to 4°C. These results indicated that geographical variation of growth habit is closely related to the degree of winter coldness. An analysis of the Vrn genotype for 216 spring‐type landraces demonstrated the uneven distribution of four Vrn genes, with Vrn4 being the least frequent. The adaptive Vrn genotype was different between localities. Genotypes carrying Vrn‐A1 and additional Vrn gene(s) were frequent in two distinct areas where the average January temperature was either below ‐7°C or over 10°C, while genotypes with any of three Vrn genes, except Vrn‐A1, adapted to areas with temperatures from 4°C to 10°C. Therefore, it was concluded that the adaptability of wheat landraces differed depending on their growth habit and Vrn genotype, and that ecotypes with different Vrn genotypes were allopatrically distributed as a result of adaptation to different winter temperature. However, the differential distribution of Vrn‐B1, Vrn‐D1 and Vrn4 could not be explained by their adaptability, and might reflect the polyphyletic origin of common wheat.     

Associations of <Emphasis Type="Italic">NAM</Emphasis>-<Emphasis Type="Italic">A1</Emphasis> alleles with the onset of senescence and nitrogen use efficiency under Western Australian conditions

Wheat grain yield and protein content are significantly influenced by the onset of senescence and the duration of the grain filling phase. The onset of senescence also affects Nitrogen use efficiency (NUE) through interacting pathways involving N accumulation and translocation of N into the grains. The objective of this study was to relate variation in NUE and its components with two groups of the NAM-A1 gene alleles; (i) early onset of senescence in cultivars carrying the NAM-A1a allele, (ii) delayed onset of senescence in cultivars carrying the Non-NAM-A1a allele (b, c, d) in wheat cultivars grown under Western Australia conditions. A field trial was carried out over two seasons examining 19 cultivars under different N rates and time of N application. The Normalized Difference Vegetation Index was utilized to determine the onset of senescence after anthesis. The early onset of senescence results in high grain yield, harvest index, and NUE due to improvements in the N utilization ability. Accelerating the onset of senescence results in a short grain filling period leading to grain maturity before the onset of unfavourable summer conditions. The function of alleles of NAM-A1 gene in controlling senescence hence the NUE is highly regulated by environmental conditions. This study concluded that the function of NAM-A1a allele induces the onset of senescence with a positive effect on the NUE and its components under Western Australian conditions.     

Enzyme activity in wheat breeding lines derived from matings of low polyphenol oxidase parents

Polyphenol oxidase (PPO) in grain plays a major role in time-dependent discoloration of wheat (Triticum aestivum L.) products, especially fresh noodles. Breeding wheat cultivars with low or nil PPO activity can reduce undesirable product darkening. The low PPO line PI 117635 was crossed to two low PPO wheats, IDO580 and ‘IDO377s’, to determine whether matings between wheats with low levels of grain PPO would result in complementation, such that lines with still lower or nil PPO would be generated. Progeny in a population derived from PI 117635/IDO580 displayed no variation in PPO activity. In the F_3:4 populations derived from PI 117635/IDO377s, and the reciprocal IDO377s/PI 117635, normal distributions of low to high PPO activity were observed. Field-grown populations (F_3:5; F_3:6) derived from IDO377s crosses were analyzed for PPO activity and used to determine whether lines with nil PPO activity were generated. Of 239 lines, 154 were verified to have PPO activity that was not significantly different from the low PPO durum (Triticum turgidum var durum) cultivar ‘Ben’. PCR analysis showed that the populations were fixed for a putative low PPO allele at Ppo-A1. Using markers for Ppo-D1, it was found that the average PPO activity of lines with 490 bp PCR fragments from PPO29 was significantly lower than that of lines with 560 bp fragments from STS01. These results disagreed with that predicted from previous reports for markers for Ppo-D1 alleles. Thus, breeders should exercise caution when making selections using markers for alleles at Ppo-D1, as known markers might predict erroneous phenotypes and genotypes in some wheat backgrounds.     

Alien introgression of spring habit dominant genes into bread wheat

Summary Alien dominant genes of spring habit were introgressed into bread wheat. The introgression was undertaken by simple crossing of winter bread wheat to related spring species or genera, followed by backcrossing to winter bread wheat, and did not involve the use of the ph mutants or embryo culture. The introgressed genes were located mostly on chromosomes of homoeologous group 5, and were allelic to the known Vrn genes in bread wheat. Nevertheless three groups of lines were discovered with the genes possibly located on other chromosomes. These genes were non-allelic to each other and to known Vrn genes and were designated Vrn6 ^Sc , Vrn7 ^Sc (introgressed from Secale cereale) and Vrn8 ^Ts (from Triticum sphaerococcum).     

Characterization of genetic diversity of puroindoline genes in Mexican wheat landraces

Grain hardness is a major factor determining milling performance of common wheat. It determines the amount of damaged starch generated during milling, and therefore the end use of a given variety. One hundred and two lines from 15 Mexican wheat landraces were analyzed for grain hardness and for its genetic control. Sixteen lines were hard and 86 were soft-textured. All hard lines could be explained by a mutation in either the Pina-D1 or Pinb-D1 genes. In six hard lines there was no amplification of Pina-D1, suggesting that this gene was deleted (Pina-D1b allele). The remaining ten hard lines showed the presence of both Pina-D1 and Pinb-D1. Sequencing the Pinb-D1 genes of the hard lines revealed the presence of two different alleles (Pinb-D1b and Pinb-D1e). The results substantiate the importance of very old Mexican landraces as potential sources of genetic diversity for key quality traits in the development of modern wheat cultivars with different grain textures.     

Alteration of wheat vernalization requirement by alien chromosome-mediated transposition of MITE

Under the changing climate, early flowering is advantageous to escape terminal heat and drought. Previously during evaluation of 14 chromosome introgression lines (ILs), we found three ILs that flowered a month earlier than their wheat background Chinese Spring (CS). This paper describes the cause of the early flowering in the ILs and provides insight into the evolution of spring wheat from the winter wheat. We used specific molecular markers for Vrn genes to determine its allelic composition. Phenotypic evaluations carried out under field conditions and in a growth chamber. Unlike the winter vrn-A1 allele of CS, the spring Vrn-A1 allele of the ILs had insertions of 222 and 131-bp miniature inverted-repeat transposable element (MITE) in the promoter region. Sequence analysis indicated that the 222-bp insertion is similar to an insertion in the spring genotype, Triple Dirk D. Our results ruled out any possibility of outcrossing or contamination. Without vernalization, Vrn-A1 is highly expressed in the ILs compared to CS. We attribute the early flowering of the ILs to the insertion of the MITE in the promoter of Vrn-A1. The alien chromosome might mediate this insertion.