Testing a depth‐based Habitat Classification System against reef fish assemblage patterns in a subtropical marine park

• 1. The Solitary Islands Marine Park (SIMP) in New South Wales (NSW), Australia, has strong cross‐shelf patterns of reef fish assemblages on shallow reefs (<25 m). While the SIMP also contains reef at depths of up to 75 m, marine communities below 25 m are poorly described. The Habitat Classification System (HCS) used for planning the arrangement of zones in this marine park included three depth categories for reef: shallow (<25 m); intermediate (25–60 m); and deep (>60 m). However, these had not been tested to determine if they adequately reflect biotic patterns.
• 2. Using baited remote underwater video (BRUV), fish assemblages were surveyed at 56 sites spread across shallow, intermediate, and deep reefs within the SIMP to examine spatial variation between depth categories. Relationships between assemblage patterns, depth, and four additional factors considered likely to affect assemblage patterns (distance from shore, reef type, dominant benthos, and latitude), were subsequently explored using multivariate statistical methods.
• 3. Reef fish assemblages differed significantly among the depth categories. Assemblage patterns for fish were strongly correlated with depth and moderately correlated with the dominant benthic assemblage. Correlations with the other factors were generally weak. Three distinct assemblages occurred on reefs <25 m, 25–50 m and >50 m. Shallow (<25 m) reefs also displayed strong cross‐shelf patterns, supporting the results from other studies. Weaker cross‐shelf patterns were evident at intermediate depths (25–50 m).
• 4. Depth‐based and cross‐shelf categories are clearly fundamental components for a HCS that will adequately represent reef fish assemblages for conservation planning in the SIMP. Further refining the depth criteria for the intermediate/deep boundary (to 50 m) improves this representation. Further research is required to determine the wider application of the refined HCS to other marine parks in NSW and to determine how well it represents other components of biodiversity. Copyright © 2011 John Wiley & Sons, Ltd.

     

Using patterns of reef fish assemblages to refine a Habitat Classification System for marine parks in NSW,Australia

• 1. The Solitary Islands Marine Park (SIMP) in New South Wales (NSW), Australia, is located in a tropical‐temperate biotone, with variable influence of the tropical East Australian Current (EAC) from inshore to offshore. Marine communities on the extensive, subtidal, rocky reefs are poorly described. As a result, the current Habitat Classification System (HCS) used as part of the process to determine the marine park zoning arrangements, which places all shallow reef (<25 m) in the same category, is unlikely to represent real biotic patterns.
• 2. To evaluate the influence of five key factors (distance from shore, reef type, dominant benthos, latitude, and depth range) fish assemblages were widely surveyed, using 30‐minute timed counts, at 68 sites across the extent of shallow reef within the park. Relationships between assemblage patterns and levels of the different factors were subsequently examined using multivariate analyses.
• 3. Patterns of reef fish assemblages were most strongly correlated with distance from shore. Three distinct assemblages occurred on inshore (<1.5 km), mid‐shelf (1.5–6 km), and offshore (>6 km) reefs. Differences in assemblage structure by reef type were also apparent on inshore and offshore reefs, but not on mid‐shelf reefs. Correlations with the other factors were weak. The cross‐shelf pattern was persistent over the scale of years.
• 4. The results of the study provide strong support for incorporating distance‐from‐shore categories into a refined HCS. This will improve its ability to represent biological diversity as reflected by patterns of reef fish assemblages. Further research is required to determine the wider application of the HCS to other marine parks in NSW and to determine if it also, effectively, represents other components of biodiversity. Copyright © 2009 John Wiley & Sons, Ltd.

     

The influence of protection and temperature on subtropical reef fish assemblages in Cape Byron Marine Park

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Effects of trap fishing on reef fish communities

• 1. Trap fishing is widespread on coral reefs but the sustainability of this practice is causing concern because it is efficient and unselective. The effects of trap fishing were investigated by comparing fish assemblages among six Caribbean islands subject to different trapping pressures. These ranged from none in Bonaire and Saba increasing through Puerto Rico, St Lucia, Dominica and Jamaica respectively.
• 2. Fish were censused at depths of 5 m and 15 m on fore‐reef slopes by counting the numbers within replicate 10 m diameter areas for 15 min. Between 64 and 1375 counts were made in each country.
• 3. In St Lucia and Jamaica abundance of fish censused on the reef was compared to representation in traps which were visually sampled underwater in the area of fish counts. Twenty‐three traps were sampled in Jamaica and 75 in St Lucia. For some comparisons between these islands, St Lucian sampling effort was reduced to that of Jamaica (23 traps and 112 counts) by randomly sub‐sampling 10 times.
• 4. Traps contained 54 different species in St Lucia and 22 in Jamaica, while there were 90 and 57 respectively in counts. After reducing St Lucian sampling effort to Jamaican levels, an average of 35 species were found in traps and 70 seen in counts. Of these, 76% in St Lucia and 73% in Jamaica were relatively more abundant in traps than they were on the reef.
• 5. Species were considered to be highly susceptible to trapping if the ratio of their abundance in traps compared to that on the reef exceeded 3:1. Trapping pressure was approximately three and a half times greater in Jamaica than St Lucia. After equalizing sampling effort, there was an average of 16 highly trappable species in St Lucia compared to 13 in Jamaica. Species did not always appear highly trappable in both countries. Eleven of St Lucia's highly trappable species were absent from Jamaica (falling to 8.5 on average after equalizing sampling effort), but none vice versa, suggesting that trapping may have contributed to their absence or rarity on Jamaican reefs.
• 6. The Tetraodontiformes, which include many non‐target species, were particularly susceptible to trapping in both countries. Their abundance in the six islands censused was inversely related to trap fishing pressure, as was that of two other non‐target families, butterflyfish (Chaetodontidae) and angelfish (Pomacanthidae).
• 7. To determine whether fish that are common in traps in St Lucia are reaching sexual maturity before capture, size frequency data for 23 species from a sample of trap catches were gathered and examined for their state of maturity. In seven species, more than a third of 705 trapped fish were immature, indicating that trap fishing causes growth over‐fishing (premature removal of fish), and calling into question the sustainability of yields for these species.
• 8. In conclusion, at the intensities seen in this study, trap fisheries cause serious over‐fishing, reduce biodiversity, and alter ecosystem structure. While commonly perceived as low impact, coral reef trap fisheries in the Caribbean and further afield, need tighter regulation and control.

Copyright © 2006 John Wiley & Sons, Ltd.     

A role for partially protected areas on coral reefs: maintaining fish diversity?

• 1. Completely banning fishing from coral reefs is now accepted to have significant benefits for marine biodiversity and in many cases, fisheries. However, the benefits of regulating fishing on coral reefs, by restricting the methods used, or the total amount of fishing, are less well understood, even though such regulations are much more likely to be supported by fishermen.
• 2. This study assesses whether banning illegal, destructive fishing methods and reducing the numbers of fishermen visiting from outside an area benefits a coral reef fishery, despite unregulated fishing by local fishermen using non‐destructive methods.
• 3. The abundance, biomass, mean length, and species richness of nine commercially important fish families are compared across ten independent patch reefs inside and outside the 470 km² Menai Bay Conservation Area in Zanzibar, Tanzania.
• 4. Even after taking into account the effect of differences in habitat and the distance between reefs, 61% (±19.7%) more fish species were found in regulated than unregulated reefs. Fish abundance, biomass, and length were not affected, suggesting that banning destructive fishing may improve biodiversity, but that further regulations may be required to improve fish stocks.Copyright © 2011 John Wiley & Sons, Ltd.

     

Fish assemblages associated with artificial reefs of concrete aggregates or quarry stone offshore Miami Beach,Florida, USA

Few studies have compared the suitability of different artificial reef construction materials in terms of their efficacy in acquiring diverse faunal assemblages. We compared the fishes associated with 12 co-located reefs constructed of limestone quarry boulders, concrete-gravel aggregate, or concrete-tire aggregate (four of each substrate) in 7 m of water, 200 m offshore Miami Beach, Florida, USA. All 12 reefs were deployed 100 m apart the same day in two lines of six. The four quarry stone reefs consist of a pile of 50 boulders each. The remaining eight reefs, of concrete-gravel aggregate and concrete-tire aggregate, were each constructed with 25 1.5 m edge and 25 1.2 m edge tetrahedron modules. Every two months from October 1998 to February 2001, SCUBA divers recorded fish species, abundance, and length, as well as spiny lobster, Panulirus argus, abundance. One hundred and forty-six species of fishes were recorded during the study period. The abundance and species richness of fish on each treatment exhibited a significant (p<0.05) seasonal variation with summer months having the greatest numbers and winter the lowest. There was no significant difference in total fish or spiny lobster abundance or fish biomass amongst the three reef types (p>0.05). Likewise, multi-dimensional scaling of Bray-Curtis dissimilarity indices did not indicate clustering of fish assemblages by reef type. Comparison of pre-deployment fish counts from the reef sites and neighboring hard bottom and jetty with counts from the same sites two years post-deployment indicate the artificial reefs increased both fish abundance and richness in the local area.     

Relationships between macro‐epibenthic communities and fish on the shelf grounds of the western Mediterranean

• 1. The present study characterizes the macro‐epibenthic assemblages, and the relationships between demersal species and benthic habitats on the shelf trawl fishing grounds off the Balearic Islands (western Mediterranean).
• 2. The data used were collected during experimental bottom trawl surveys from 2002 to 2005. A total of 157 samples from 38–255 m depth were analysed.
• 3. Three macro‐epibenthic assemblages were identified in both the shallow (at 38–91 m) and deep shelf (90–255 m). Macroalgae bathymetric distribution was identified as the main factor explaining the segregation between shallow and deep shelf assemblages.
• 4. Two especially sensitive habitats were identified: maërl and crinoid beds; a third habitat was identified as Peyssonnelia beds, which represented the highest biomass on the whole shelf, with a similar species richness to the maërl beds. On the deep shelf, crinoid beds represented the highest biomass.
• 5. Habitat type had a significant effect on the distribution of demersal commercial species, most of them being more abundant in the two sensitive habitats mentioned and in the Peyssonnelia beds. Some species showed size‐specific habitat preferences.
• 6. Fisheries management in the area should take into account the resilience of these benthic habitats, and their importance from both ecological and sustainable fisheries management perspectives.

Copyright © 2008 John Wiley & Sons, Ltd.     

Fish assemblages of Red Sea backreef biotopes

• 1. Fish assemblages of shallow‐lagoonal biotopes (seagrass beds, coral patches, reef flat and sand) were examined within the Nabq Managed Resource Protected Area (MRPA), South Sinai, Egypt. This protected area supports a small‐scale artisanal Bedouin fishery, managed by gear restrictions and a network of no‐take zones (NTZs).
• 2. Coral patches showed highest species richness and diversity of fish, followed in order by the reef flat, shallow seagrass beds and sandy bottoms.
• 3. There were clear differences in fish assemblages between the biotopes surveyed, little differences between sampling areas and no significant differences in fish assemblages between no‐take and take zones, suggesting species characteristic of these shallow‐water biotopes are dispersed along the coast irrespective of fishing pressure.
• 4. Nine species (Acanthurus nigrofuscus, Asterropteryx semipunctatus, Cryptocentrus caeruleopunctatus, Cheilio inermis, Thalassoma rueppellii, Lethrinus mahsena, Lethrinus nebulosus, Parupeneus forsskali and Pomacentrus trilineatus) had a 95% correlation to the pattern of assemblage distribution, indicating these species are the most important determinants of the fish community.
• 5. Approximately one‐third of fishes recorded appeared to be juveniles, with seagrass beds having a particularly high proportion of juvenile fish, including several commercial species.
• 6. The structure of the fish assemblage and fish size suggests that shallow‐water biotopes in Nabq MRPA may be acting as nursery areas of commercial fish for the Bedouin fishery.

Copyright © 2006 John Wiley & Sons, Ltd.     

Size and age are important factors for marine sanctuaries: evidence from a decade of systematic sampling in a subtropical marine park

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Spatio-temporal distribution of mutton snapper and dog snapper spawning aggregations in the South-west Atlantic

1. Sites and periods of spawning aggregations of two important fishery resources, the mutton snapper, Lutjanus analis, and the dog snapper, Lutjanus jocu, were identified and validated along the Brazilian north-east coast (latitude 8–15°S) using exploratory analysis of catch per unit effort (CPUE) data, gonadosomatic index analysis, and gonad histology.
2. The CPUE analysis for both species allowed the identification of outliers and far outliers, representing fisheries with exceptional catches, which were used as proxies of possible aggregation.
3. The presence of pre-spawning and recent spawning signs (hydrated oocytes and post-ovulatory follicles) in the ovary of females caught at sites with recurrent records of high CPUE allowed the validation of spawning activity at those specific sites for each species. All aggregation sites identified in this study were located on the outer shelf, close to the shelf break, a region that has been declared an Ecologically and Biologically Significant Marine Area.
4. Comparison of two subregions showed significant differences in size structure of the fish sampled during landings, suggesting a fishing depletion effect in the north region.
5. For both species, reproduction peaked twice in all regions studied, with a more marked peak during summer. However, spawning activity was observed in almost every month of the year, suggesting that seasonal closures could be more effective if combined with spatial measures.
6. In the northern part of the study range, spawning grounds were found to lie just outside the boundaries of one of Brazil's largest marine protected areas. Inclusion of those grounds in the marine protected area would increase protection of these species and also mean increased protection of an Ecologically and Biologically Significant Marine Area, encompassing mesophotic reefs.
7. The identification of these spawning aggregations sites on the north-east coast of Brazil was conducted in collaboration with local fishers that traditionally use bottom handline. Co-management approaches are suggested in view of the importance of these fishing sites for traditional fishing communities that may also face threats due to encroachment of mobile fleets.

     

Alien turf: Overfishing,overgrazing and invader domination in south‐eastern Levant reef ecosystems

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A framework for adaptive gear and ecosystem‐based management in the artisanal coral reef fishery of Papua New Guinea

• 1. Artisanal fishing on coral reefs in Papua New Guinea is an important livelihood activity that is managed primarily at the level of local communities. Pockets of overexploitation exist and are expected to increase with plans for increased commercialization.
• 2. This paper provides a current assessment of the artisanal multi‐species coral reef fishery by examining selectivity of the dominant gear, namely line fishing, spearguns, and gill nets. Each gear has its own strengths and weaknesses in terms of use and conservation of resources, with no clear problem gear.
• 3. The three gears utilize different resources but there was moderate overlap in the species caught, particularly between gill nets and line fishing and marginally between lines and spearguns. Gill nets have the disadvantage of being destructive to coral and the advantage of catching commercial species. Line fishing catches an intermediate number of species but mostly large‐bodied and predatory species that could potentially reduce predation and the mean trophic level of the fishery. Spearguns catch the highest numbers of species, including many non‐commercial and herbivorous fish and could reduce the diversity of fish and encourage algal growth.
• 4. This information could be used in combination with scientific monitoring and traditional ecological knowledge to develop an adaptive management framework that uses local restrictions on the various gears to restore or balance the fishery and ecosystem. Restrictions could be selectively imposed: on gill nets when coral cover is low, line fishing when large‐bodied predators are depleted, and spearguns when biodiversity is reduced and algal abundance high.

Copyright © 2008 John Wiley & Sons, Ltd.     

Dynamics of fish assemblages on coral reefs subjected to different management regimes in the Abrolhos Bank,eastern Brazil

• 1. Marine protected areas (MPAs) range from multiple‐use areas (MUA) to absolute no‐take reserves (NTR). Despite their importance for fisheries management, there are few long‐term studies comparing benefits from different types of MPAs within the same region.
• 2. Fish assemblages were monitored for five years (2001–2005) in the largest coral reefs in the South Atlantic (Abrolhos Bank, Brazil). Monitoring included one community‐based MUA, two NTRs (one established in 1983 and another in 2001), and one unprotected area. Benthic assemblages at these areas, as well as fish assemblages on unprotected deeper reefs (25–35 m), were monitored from 2003 onwards.
• 3. Habitat characteristics strongly influenced fish assemblages' structure. This, together with the lack of data from before establishment of the MPAs, did not allow an unequivocal analysis of the effects of the MPAs.
• 4. Biomass of commercially important fish, particularly small carnivores, was higher in the older NTR. Biomass of black grouper Mycteroperca bonaci increased by 30‐fold inside NTRs during the study period, while remaining consistently low elsewhere.
• 5. A single herbivore species, the parrotfish Scarus trispinosus, dominated fish assemblages (28.3% of total biomass). Biomass of this species increased in 2002 on the younger NTR and on the MUA, soon after establishment of the former and banning of the parrotfish fishery in the latter. This increase was followed by a decline from 2003 onwards, after increased poaching and reopening of the parrotfish fishery.
• 6. Fish biomass increased in 2002 across the entire region. This increase was stronger in sites closer to deeper reefs, where fish biomass was up to 30‐times higher than shallow reefs: movement of fish from deeper to shallower areas may have played a role.
• 7. The effective use of MPAs in the Abrolhos Bank is still dependent on adequate enforcement and the protection of critical habitats such as deep reefs and mangroves.

Copyright © 2008 John Wiley & Sons, Ltd.     

Monitoring of South Sinai coral reefs: influence of natural and anthropogenic factors

• 1. To monitor any impacts to coral reefs related to the exponential growth of tourism in the South Sinai region of the Egyptian Red Sea, nine stations were established at key reef sites over 2002–2003. At each station coral cover was determined using a video survey method at depths of 3, 7 and 16 m, and fish abundance by underwater visual census at depths of 3 and 10 m.
• 2. Mean total coral cover (hard plus soft) ranged from 58% to 23% at 3 m, 50% to 14% at 7 m, and 52% to 13% at 16 m, and hard coral cover from 37.5% to 15.7% at 3 m, 32.8% to 7.0% at 7 m, and 17.8% to 2.2% at 16 m. Analyses confirmed differences in coral assemblage related to depth and wave exposure.
• 3. Fish abundances and assemblages also varied with depth and proximity of deep water. Also the one site subject to fishing had lower abundances of some commercial fish families and greater abundances of some herbivores.
• 4. Transects subject to greater tourist use did not segregate from those subject to less tourist use, despite evidence from other work of an effect from visitor damage to corals at some sites. This may be because visitors were more attracted to sites that had higher coral cover.
• 5. Comparison of the present data with that from past studies is difficult because of the differences in sites and method employed, but several observations suggest a moderate decline in coral cover during recent decades. Such a decline would be compatible with the recorded impact of an outbreak of crown‐of‐thorns starfish, Acanthaster planci, as well as with other evidence of accumulating damage by visitors.
• 6. Further monitoring using the same stations and consistent protocols is urgently required.

Copyright © 2008 John Wiley & Sons, Ltd.     

Ontogenetic movements of juvenile blacktip reef sharks: evidence of dispersal and connectivity between coastal habitats and coral reefs

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The effects of human activity on the temporal variability of coral reef fish assemblages in the Key Largo National Marine Sanctuary

• 1. A visual assessment method, called Discrete Group Censusing, was used to assess and monitor five coral reef fish assemblages in the Key Largo National Marine Sanctuary, Florida, USA.
• 2. Samples were obtained quarterly from Winter 1988 to Autumn 1990 to investigate a possible relation between the variability of reef fish assemblages and human disturbance.
• 3. Two types of disturbance were studied: a ship grounding that occurred 4 years previous to the study, and intensive, recreational snorkel and SCUBA diving. These disturbances appeared to have no short-term effect on the temporal variability of the reef fish assemblages during the study period.
• 4. Furthermore, the assemblages at all five study sites appeared to be extremely stable over the 2 year period of the study. These results support the theory that coral reef fish assemblages are highly ordered and stable over relatively large spatial scales.
• 5. The Discrete Group Censusing visual assessment method was found to be a valuable and easily applied tool for the nondestructive in situ monitoring of reef fish assemblages on coral reefs.

     

Trap modification opens new gates to achieve sustainable coral reef fisheries

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Evaluating the efficacy of small‐scale marine protected areas for preserving reef health: A case study applying emerging monitoring technology

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Changes in a coral reef fishery along a gradient of fishing pressure in an Indonesian marine protected area

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Larval fish assemblages and water mass structure off the oligotrophic south-western Australian coast

Larval fish assemblages were sampled using replicated oblique bongo net tows along a five‐station transect extending from inshore (18 m depth) to offshore waters (1000 m depth) off temperate south‐western Australia. A total of 148 taxa from 93 teleost families were identified. Larvae of Gobiidae and Blenniidae were abundant inshore, while larvae of pelagic and reef‐dwelling families, such as Clupeidae, Engraulidae, Carangidae and Labridae were common in continental shelf waters. Larvae of oceanic families, particularly Myctophidae, Phosichthyidae and Gonostomatidae, dominated offshore assemblages. Multivariate statistical analyses revealed larval fish assemblages to have a strong temporal and spatial structure. Assemblages were distinct among seasons, and among inshore, continental shelf and offshore sampling stations. Inshore larval fish assemblages were the most seasonal, in terms of species composition and abundance, with offshore assemblages the least seasonal. However, larval fish assemblages were most closely correlated to water mass, with species distributions reflecting both cross‐shelf and along‐shore oceanographic processes and events. Similarity profile (SIMPROF) analysis suggested the presence of twelve distinct larval fish assemblages, largely delineated by water depth and season. The strength and position of the warm, southward flowing Leeuwin Current, and of the cool, seasonal, northward flowing Capes Current, were shown to drive much of the variability in the marine environment, and thus larval fish assemblages.