The population dynamics of the estuarine isopod Exosphaeroma hylocoetes (Barnard, 1940) within three temporarily open/closed southern African estuaries

The population dynamics of the estuarine isopod, Exosphaeroma hylocoetes, was investigated monthly from February 2006 to August 2007 in three temporarily open/closed Eastern Cape estuaries, the East and West Kleinemonde and Kasouga Estuaries. Mean isopod abundances and biomasses ranged between 0 and 4791 ind/m² and 0 and 9.65 mg/dwt/m² in the West Kleinemonde Estuary and between 0 and 108 ind/m² and 0 and 0.318 mg/dwt/m² in the nearby East Kleinemonde Estuary. In the Kasouga Estuary, the values ranged between 0 and 3650 ind/m² and 0 and 5.105 mg/dwt/m². Temporal changes in the abundance and biomass of E. hylocoetes within the three systems was primarily linked to mouth phase, with populations crashing when the mouth was open and to a lesser extent, seasonality. In all three estuaries maximum abundance and biomass was recorded in the middle reaches, which could be ascribed to the presence of submerged macrophytes. E. hylocoetes demonstrates strong sexual dimorphism, with males being significantly larger than females (P < 0.05). Sex ratios were skewed in favour of females in all three estuaries. Females were encountered carrying young from an overall length of 2.5 mm throughout the year     

Birds as major predators of fishes in the East Kleinemonde Estuary

This study provides a quantitative account of fish predation by piscivorous birds in the temporarily open/closed East Kleinemonde Estuary and represents the first global attempt to simultaneously relate such consumption to production by a fish community in the same estuary. Cormorants and herons were the dominant predators and seasonal variations in the avifaunal community composition were noted. Based on comprehensive counts over three years, the piscivorous bird population was estimated to have consumed a maximum of 4 414?kg of fish in 1994, 2 400?kg in 1995/96 and 2 960?kg in 2004/05. In 1995/96 fish production in the East Kleinemonde Estuary (55.89?g m^?2 a^?1) was estimated at 9 780?kg and maximum bird predation amounted to 25% of annual fish production within the system over the same period, assuming that all birds counted on the estuary foraged there and that the diet of these birds comprised only fish. The above 1995/96 figures, together with an estimate of fish predation by the dominant piscivorous fish Lichia amia of 696?kg suggests that birds are probably the single most important natural predator of fishes within this estuary. An unusual mass invasion by marine Cape Cormorants Phalacrocorax capensis during July 1994 was responsible for large-scale predation of fish (2 155?kg) and resulted in the population of estuary-associated marine fishes declining from approximately 63 300 to about 18 600 individuals during the 1994 closed phase. Given that little or no marine fish recruitment was possible while the estuary mouth was closed, piscivorous birds are likely to have a higher predatory impact on populations of juvenile marine fishes in small temporarily closed estuaries than in larger permanently open systems.     

Long-term physico-chemical and faunal changes in a small,rural South African estuary

The Palmiet Estuary is a small, rural estuary in the Western Cape that only closes briefly during dry summers. The system was previously surveyed during 1979 to 1980 and we repeated the survey in April 2015 (mouth closed) and September 2015 (mouth open). Salinity, temperature, pH and oxygen saturation were measured, and invertebrate and fish faunas surveyed. Physico-chemical characteristics have undergone little directional change, apart from an apparent increase in pH, possibly as a result of changes in land use and application of fertilisers and pesticides in the catchment. Invertebrate species richness increased from 31 to 40 species, despite lower sampling effort in 2015. Most changes were among rare species, or were readily explained by changes in mouth condition and water chemistry. We also confirmed a substantial range extension of the tropical crab, Varuna litterata, rediscovered the locally endemic amphipod, Quadrivisio aviceps, and reported several new distribution records. Gastropods had virtually disappeared from the system, whereas the previously unreported bivalve, Brachidontes virgilae, had become abundant. Overall, fish diversity dropped from 19 to 11 species, but this can largely be ascribed to differ- ences in sampling frequency, season and mouth state. Comparisons of samples from like months showed the fish assemblage to have remained fairly stable, despite changes in inflowing water chemistry and infection of fish by the pathogenic water mould, Aphanomyces invadans. Bird abundance and diversity increased substantially. No alien invertebrate or fish species were recorded. Accordingly, in marked contrast to other smaller estuaries in the region, the Palmiet Estuary has remains in relatively good condition.     

The fish community of the berg river estuary and an assessment of the likely effects of reduced freshwater inflows

Data concerning the species composition, abundance and distribution of fishes inhabiting the Berg River estuary are presented and used to assess the value of the estuary to fish, and the likely eflects of reduced freshwater inflows. A total of 31 species was recorded, eight of which were classified as estuarine residents, 11 as marine estuarine-opportunists, six as marine stragglers and six were freshwater species. Liza richard- sonii, an opportunist, was the most abundant (54% N) and widely distributed species encountered during the winter and summer seine-net surveys. Three other species (all residents) contributed more than 10% of the total catch; Atherina breviceps and Caffrogobius nudiceps occurring most abundantly in the lower estuary, and Gilchristella aestuaria in the middle estuary. The low number of species compared with estuaries in other regions of the South African coast reflect a well-established marine biogeographical trend. The higher proportions ol resident species, entirely dependent species and partially dependent species suggest, however, that west coast estuaries may be more important to the fish that inhabit them than are estuaries in other regions. It is concluded that the fish community of the estuary is already suffering the effects of habitat degradation and that further reductions in freshwater inllows are not desirable.     

The ecology of two degraded estuaries on the north coast of Natal,South Africa

The biota of the Tongati and Mdloti estuaries were studied in relation to the environment and human interference. Results are compared with those obtained from a relatively undamaged estuary. The Tongati receives treated sewage effluent, is rarely closed from the sea, has low salinities and low oxygen tensions, but is rich in phosphorus and nitrogen. Energy values of benthic floe from Tongati were high and large quantities of water hyacinth (Eichomia crassipes) occurred. The zooplankton and zoobenthos were impoverished and dominated by freshwater species. The roots of Eichomia provided a habitat for many invertebrates, chiefly insect larvae and the crab Varuna iitterata. The fish fauna was poor and most species were confined to the lagoon near the mouth. Iliophagous species, mainly Mugilidae, were dominant. The Mdloti, frequently closed from the sea but often artificially opened, exhibited typical estuarine salinity patterns, was well oxygenated but relatively poor in phosphorus and nitrogen. Primary production and energy values of benthic floe were low. Zooplankton and zoobenthos were impoverished. The fish fauna, similar to that of Tongati, was dominated by Mugilidae.

The food chain from benthic floe to iliophagous fish remains viable in these degraded estuaries.     

Salinity ranges of some southern African fish species occurring in estuaries

The recorded salinity ranges of 96 fish species occurring in southern African estuaries are documented. Factors influencing the tolerance of fishes to low and high salinity regimes are discussed, with most species tolerant of low rather than high salinity conditions. This is important since most systems are subject to periodic freshwater flooding, especially during summer. The penetration of freshwater teleosts and elasmobranchs into estuaries is examined and the occurrence of marine fishes in rivers documented. Mortalities arising from salinity extremes in southern African estuaries are discussed, with temperature a key factor initiating such fish kills. Only eight fish species have been recorded spawning in estuaries although the fry of many species are attracted to estuarine waters. It is concluded that a small percentage of southern African fishes have succeeded in utilizing estuaries and this may be attributed to the paucity of strong osmoregulators     

A survey of the fish fauna of Transkei estuaries Part Four: The Mntafufu and Mzamba River estuaries

The Mntafufu and Mzamba Rivers have small catchment areas (178 and 505 km², respectively) in the forested coastal belt of Transkei and have relatively small estuaries (5 and 2 km long, respectively). Although the annual rainfall is in excess of 1000 mm in this area, the mean annual runoff was less than 70 Mm³ in both cases. Serious floods were not observed during the survey period, while turbidity and sediment loads were usually very low. Salinities were usually high (x? = 30,0-38,0‰) in the bottom water and temperatures in the upper reaches were usually higher than in the lower reaches. The species composition, and seasonal and spatial abundance of the fish fauna of the two estuaries were determined by means of gill nets. A total of 1043 fish (385,8 kg) representing 42 species were caught in the Mntafufu estuary. The orangemouth glassnose Thryssa vitrirostris and V. cunnesius were the most abundant fish in the estuary. Numerically 42% of the catch (46% gravimetrically) belonged to the family Mugilidae (11 species) of which Mugil cephalus, Valamugil buchanani and V. cunnesius were the most important. A total of 389 fish (241,1 kg) were caught in the Mzamba estuary. Twenty-five species were obtained with Hilsa kelee dominating numerically. Seven species of mullet contributed 38,3% of the numbers or 54,2% of the fish biomass. The diamond mullet (Liza alata) and the flathead mullet (Mugil cephalus) were the most abundant in terms of biomass. The highest catches in the two estuaries were taken in the lower reaches. Mean number and biomass of fish taken per net was 20,5 fish and 7,2 kg, and 16,2 fish and 10,1 kg in the Mntafufu and Mzamba estuaries, respectively.     

Disentangling the identities and distribution patterns of the introduced beachfleas Orchestia gammarellus and Platorchestia platensis (Crustacea: Amphipoda: Talitridae) in South Africa

Two introduced beachfleas, Orchestia gammarellus and Platorchestia platensis, have been recorded from South Africa, but have been misidentified by some earlier researchers and, prior to this study, each was also known from just a few, scattered observations, such that their true distributions remained obscure. We illustrate both species to clarify the features that identify and distinguish them and determine their true distributions by re-examining historical samples and by collecting new material from estuaries and lagoons along the west and south coasts of South Africa. Adult males of O. gammarellus have slender antennae and characteristic expanded, flattened, oar-like distal segments on pereopod 7. Adult males of P. platensis have the peduncle of antenna 2 strongly swollen and have bulbous, but not flattened, distal segments on pereopod 7. Both species occur under wrack and other debris along the banks of estuaries and sheltered lagoons. Orchestia gammarellus is found only along the south-west coast, in the Berg River Estuary, Langebaan Lagoon and the Diep River Estuary. Previous records from Knysna were misidentifications of P. platensis. Platorchestia platensis is found at one west coast site, Langebaan Lagoon, but is widely distributed from Cape Point eastwards to at least Algoa Bay. Both species share the same habitats as several other native beachfleas and competitive interactions between native and introduced species merit investigation.     

Description and ecology of larvae of Glossogobius callidus and Redigobius dewaali (Gobiidae) from temperate South African estuaries

This paper describes the morphology and ecology of the larvae and early juveniles of two common gobiids in warm temperate South African estuaries. The early developmental stages of Glossogobius callidus and Redigobius dewaali were collected during plankton surveys in seven permanently open and five intermittently open estuaries along southeastern South Africa. Larval G. callidus have a characteristic ventral row of pigment that extends from the cleithral symphysis along the ventral midline of the tail to the end of the caudal peduncle; notochord flexion takes place at the yolk-sac stage, between 3 and 4 mm BL. Larval R. dewaali are characterized by having two very large stellate melanophores on the ventral surface of the trunk and tail, and internal pigment between the snout and hindgut; notochord flexion takes place between 4 and 6 mm. Body lengths at settlement for G. callidus and R. dewaali are 13 mm and 16 mm, respectively. G. callidus and R. dewaali dominate the larval gobiid catch in warm temperate estuaries. Estuary type and freshwater input played a defining role in the occurrence of larvae of these, often sympatric, species in temperate estuaries. Larval G. callidus occurred in both permanently open and intermittently open estuaries, and were most abundant in mesohaline regions over the spring/summer period. By contrast, larval R. dewaali occurred exclusively in permanently open estuaries and were more prevalent in the fresh and oligohaline regions in autumn. Larvae of both species were more prevalent in freshwater-rich estuaries. Densities of G. callidus and R. dewaali peaked at 101 and 3829 larvae per 100 m³respectively. The usefulness of using the early stages of these gobiids as indicators of estuarine health based on their specific and often prolific estuarine occurrence is discussed.     

Toxoplasma gondii in edible fishes captured in the Mediterranean basin

The issue of whether market fish can be involved in the transmission of Toxoplasma gondii in the marine environment is highly debated since toxoplasmosis has been diagnosed frequently in cetaceans stranded along the Mediterranean coastlines in recent times. To support the hypothesis that fishes can harbour and effectively transmit the parasite to top‐of‐the‐food‐chain marine organisms and to human consumers of fishery products, a total of 1,293 fishes from 17 species obtained from wholesale and local fish markets were examined for T. gondii DNA. Real‐time PCR was performed in samples obtained by separately pooling intestines, gills and skin/muscles collected from each fish species. Thirty‐two out of 147 pooled samples from 12 different fish species were found contaminated with T. gondii DNA that was detected in 16 samples of skin/muscle and in 11 samples of both intestine and gills. Quantitative analysis of amplified DNA performed by both real‐time PCR and digital PCR (dPCR) confirmed that positive fish samples were contaminated with Toxoplasma genomic DNA to an extent of 6.10 × 10^?2 to 2.77 × 10⁴ copies/ml (quantitative PCR) and of 1 to 5.7 × 10⁴ copies/ml (dPCR). Fishes are not considered competent biological hosts for T. gondii; nonetheless, they can be contaminated with T. gondii oocysts flowing via freshwater run‐offs (untreated sewage discharges, soil flooding) into the marine environment, thus acting as mechanical carriers. Although the detection of viable and infective T. gondii oocysts was not the objective of this investigation, the results here reported suggest that fish species sold for human consumption can be accidentally involved in the transmission route of the parasite in the marine environment and that the risk of foodborne transmission of toxoplasmosis to fish consumers should be further investigated.     

Inshore small-mesh trawling survey of the Cape south coast. Part 2. Occurrence of estuarine-associated fishes

Marine inshore trawl catches of 12 species of estuarineassociated fishes are reported together with their depth and length distributions. Underwater observations of four additional species, made during 122 SCUBA dives over rocky substrates, are also recorded. Species include Rhabdosargus holubi, R. globiceps, Pomadasys commersonii, Argyrosomus hololepidotus, Pomatomus saltatrix, Galeichthys sp. and Sarpa salpa. The data are related to published accounts of the occurrence of juveniles of estuarine-associated and inshore species in the Cape south coast region. This revealed three ecologically distinct groups of inshore fishes: typically marine species that only use marine inshore nursery grounds; an intermediate group that uses mainly marine inshore nurseries plus estuarine nurseries to a limited extent; and a specialized group that is dependent on estuarine nurseries. Possible reasons for this dependence on estuaries are suggested.     

Shallow-Water Trawling Off the Swartkops Estuary,Algoa Bay

Juvenile fish occurring in Algoa Bay off the mouth of the Swartkops estuary were collected using a 3-m beam trawl. Pomadasys ollvaceum, Engraulis capensis, Caffrogoblus agulhensls, Argyrosomus hololepidotus and Galeichthys feliceps were the most abundant species in the trawl catches. Despite the proximity of the Swartkops estuary the trawls failed to capture species which are abundant as Juveniles in the estuary and it is concluded that the estuary has little influence on the juvenile fish fauna outside the mouth.     

Small fishes crossed a large mountain range: Quaternary stream capture events and freshwater fishes on both sides of the Taebaek Mountains

The Taebaek Mountains in Korea serve as the most apparent biogeographic barrier for Korean freshwater fishes, resulting in 2 distinct ichthyofaunal assemblages on the eastern (East/Japan Sea slope) and western (Yellow Sea and Korea Strait slopes) sides of the mountain range. Of nearly 100 species of native primary freshwater fishes in Korea, only 18 species occur naturally on both sides of the mountain range. Interestingly, there are 5 rheophilic species (Phoxinus phoxinus, Coreoleuciscus splendidus, Ladislavia taczanowskii, Iksookimia koreensis and Koreocobitis rotundicaudata ) found on both sides of the Taebaek Mountains that are geographically restricted to the Osip River (and several neighboring rivers, for L. taczanowskii and I. koreensis ) on the eastern side of the mountain range. The Osip River and its neighboring rivers also shared a rheophilic freshwater fish, Liobagrus mediadiposalis , with the Nakdong River on the western side of the mountain range. We assessed historical biogeographic hypotheses on the presence of these rheophilic fishes, utilizing DNA sequence data from the mitochondrial cytochrome b gene. Results of our divergence time estimation indicate that ichthyofaunal transfers into the Osip River (and several neighboring rivers in East Sea slope) have occurred from the Han (Yellow Sea slope) and Nakdong (Korea Strait slope) Rivers since the Late Pleistocene. The inferred divergence times for the ichthyofaunal transfer across the Taebaek Mountains were consistent with the timing of hypothesized multiple reactivations of the Osip River Fault (Late Pleistocene), suggesting that the Osip River Fault reactivations may have caused stream capture events, followed by ichthyofaunal transfer, not only between the Osip and Nakdong Rivers, but also between the Osip and Han Rivers.     

Prédation and prey selectivity by Argyrosomus hololepidotus (Osteichthyes: Sciaenidae) in south-eastern Cape waters of South Africa

Argyrosomus hololepidotus (kob) is a top predator in the shallow marine environment of the south-eastern Cape. There is considerable change in prey taken over the size range of predators examined (256-1701 mm). Young A. hololepidotus are planktivorous taking swarming mysids, but as they grow they become piscivorous, feeding on both pelagic and demersal prey associated with soft sediments. The pelagic cephalopod Loligo reynaudi is also taken by large specimens. Prey selection varies with locality and time of year. A field experiment in which the prey were compared with fish caught in a small-mesh net revealed a preference for some slow-moving demersal species. The length distributions of dominant prey species are given and these clearly show that larger prey are preferred by larger predators.     

Turbidity-induced changes in feeding strategies of fish in estuaries

The aim of this study was to determine the effect of turbidity on the feeding strategies of fish in estuaries. Three species representing different feeding guilds were selected for the investigation. These were Elops machnata (representative piscivore), Pomadasys commersonnii (a macrobenthivore) and Atherina breviceps (a planktivore). The stomach contents of these fish were examined from a clear and a turbid estuary and some experimental work was carried out on A breviceps to test the hypothesis that turbidity affects feeding behaviour. Turbidity was found to have no effect on size selection of prey, but feeding rate, particularly of visual predators, was reduced at higher turbidity levels. This was caused by a decrease in the reactive distance of the fish. It would appear that in order to optimize the aquisition of food under different turbidity conditions fishes have the ability to change their feeding strategies. Visual predators are more affected by turbidity than are macrobenthic feeders.     

Ecology of southern African estuaries: Part XIII. The Palmiet River estuary in the south-western Cape

The Palmiet estuary is only 1,67 km in length, but has a relatively large catchment of 539 km². Rain falls largely during winter when it scours the estuary and widens the mouth, but by late summer the mouth narrows and, in some years, may close. The estuary never closes for more than a few months, and salinities are normal. The entire estuary has clear bottom water and high bottom salinities, but the surface waters are usually fresh and darkly stained with humic acid. This permanent stratification allows many marine species to penetrate the estuary.

Owing to the scouring in winter, the sediments are coarse, >98% consisting of sand and gravel, with a low organic content. In situ primary production is low, contributing only about one fifth of the organic material in the system, the rest being imported from the river and the sea. Species richness is low, only 28 species of invertebrates being recorded, but many of these occur in enormous numbers. Callianassa kraussi plays a crucial role, trapping fine particles around its burrows and locally enhancing the organic content of the sediments. Its faeces are an important vehicle for the concentration and turnover of organic matter.

Four of the 19 species of fish recorded breed in the estuary, the rest being represented largely by juveniles or small adults. Only three species occurred in the estuary year-round, the other species being absent during the period that the estuary is in flood.

Floods and a relatively high flow of river water are critical to keeping the estuary open. If, as proposed, a dam is built on the river, steps will have to be taken to ensure that the mouth is kept open. A related problem will be the reduction of organic material entering the estuary from the river and the sea.     

Factors Influencing the Recruitment of Juvenile Fishes into the Mhlanga Estuary

The migration of juvenile fishes (<5 cm) into the temporarily open Mhlanga estuary was monitored to determine the effects of different opening periods on immigration. The estuary opened at the end of January 1978 following a nine month closed phase. Only two marine species were recorded entering the estuary in February, compared to 11 species in November 1978. The estuary was closed between April and September. The large November recruitment may be attributed to the abundance of juvenile fishes in the sea adjacent to the estuary, whereas by February very few juveniles were present in Natal inshore waters. Estuarine and freshwater fish species were found to breed inside the estuary during the closed phase when environmental conditions were relatively stable. Mechanisms employed by these species to prevent eggs and larvae from being swept out to sea are discussed, as are strategies used by marine species to ensure recruitment during the very short open phase of the estuary.     

The ecology of Sphyraena barracuda (Osteichthyes: Perciformes) in the Kosi system with notes on the Sphyraenidae of other Natal estuaries

The ecology of Sphyraena barracuda was studied in the Kosi estuary system of Natal. Fry enter from the sea at a length of 20 mm and live in shallow marginal weed-beds until a length of 80 mm when they move to fringing Phragmites reed-beds. After reaching 300 mm they move to open water areas. No specimens longer than 500 mm were recorded and none were mature. Growth is rapid, they attain 180 mm in the first six months and after two years measure 400-500 mm. They leave the estuary after about two years. Their significance in the estuarine fish community is due to their predation, at all sizes, on a variety of estuarine-dependent juvenile fishes (e.g. Rhabdosargus spp., Mugilidae) and adults of estuarine species (e.g. Ambassis spp.). S. barracuda was recorded at salinities between 4°/oo and 35°/oo, only in very clear water and at temperatures from 14,4 °C to 37 °C. Sphyraena bleekeri and S. qenie, which are also clear-water species, were found at Kosi in salinities from 0,5 to 35%o. They are also piscivorous on a range of small teleosts. Sphyraena iello is the most widespread barracuda in Natal estuaries, but only juveniles were recorded. This species is tolerant of a wide range of turbidities and salinities which enables it to live under most estuarine conditions. The distribution, ecology and interspecific interactions among Sphyraenidae in Natal estuaries are discussed in relation to their feeding biology, habitat preferenda and physical tolerances.     

The diet,food selectivity and niche of Rhabdosargus sarba (Teleostei: Sparidae) in Natal estuaries

The juveniles and subadults of Rhabdosargus sarba are one of the most common components of the benthic fish community of Natal estuaries. The diet consists mainly of aquatic macrophytes and filamentous algae although a significant proportion is made up of bivalves and the amphipod Grandidierella lignorum. The last two taxa are positively selected when little plant material is consumed. R. sarba feeds during daylight with a peak in the early afternoon. The relationship between R. sarba and the very similar sympatric R. holubi and R. auriventris are discussed in relation to their diet, divergence and distribution. Resource partitioning in Natal estuaries between R. sarba, the Gerreidae and Pomadasys commersonii is also discussed.     

Diet of largemouth bass,Micropterus salmoides (Centrarchidae), an invasive alien in the lower reaches of an Eastern Cape river,South Africa

Largemouth bass (Micropterus salmoides) have been introduced to many South African river systems where they become invasive and pose a threat to native biota. The diets of small (32–138 mm TL) and large (192–448 mm TL) sized bass were analysed and compared in a marine fish nursery area in the lower Kowie River on the warm temperate coast of South Africa over a one-year period from March 2009 to February 2010. Dietary differences were detected between the two size groups. Amphipod sp. (% index of relative importance (IRI) = 69.2) and dipterans (Insecta) (%IRI = 21.9) dominated gut contents of small bass while larger bass preyed mostly on odonates (Insecta) (%IRI = 16.3) and the brachyuran Potamonautes sidneyi (%IRI = 80.0). Fish prey was of low importance during this study but comparisons with previous work on the lower Kowie River showed that when the river is flowing, young marine fish recruiting into the freshwater from the estuary become important prey items. These data suggest that in the lower Kowie River bass utilize invertebrate prey at low fish prey abundance and opportunistically feed on migrant fish when these are available.