Drivers of microbial respiration and net N mineralization at the continental scale

The dominant pools of C and N in the terrestrial biosphere are in soils, and understanding what factors control the rates at which these pools cycle is essential in understanding soil CO₂ production and N availability. Many previous studies have examined large scale patterns in decomposition of C and N in plant litter and organic soils, but few have done so in mineral soils, and fewer have looked beyond ecosystem specific, regional, or gradient-specific drivers. In this study, we examined the rates of microbial respiration and net N mineralization in 84 distinct mineral soils in static laboratory incubations. We examined patterns in C and N pool sizes, microbial biomass, and process rates by vegetation type (grassland, shrubland, coniferous forest, and deciduous/broadleaf forest). We also modeled microbial respiration and net N mineralization in relation to soil and site characteristics using structural equation modeling to identify potential process drivers across soils. While we did not explicitly investigate the influence of soil organic matter quality, microbial community composition, or clay mineralogy on microbial process rates in this study, our models allow us to put boundaries on the unique explanatory power these characteristics could potentially provide in predicting respiration and net N mineralization. Mean annual temperature and precipitation, soil C concentration, microbial biomass, and clay content predicted 78% of the variance in microbial respiration, with 61% explained by microbial biomass alone. For net N mineralization, only 33% of the variance was explained, with mean annual precipitation, soil C and N concentration, and clay content as the potential drivers. We suggest that the high R² for respiration suggests that soil organic matter quality, microbial community composition, and clay mineralogy explain at most 22% of the variance in respiration, while they could explain up to 67% of the variance in net N mineralization.     

Substrate type,temperature, and moisture content affect gross and net N mineralization and nitrification rates in agroforestry systems

Accurate prediction of soil N availability requires a sound understanding of the effects of environmental conditions and management practices on the microbial activities involved in N mineralization. We determined the effects of soil temperature and moisture content and substrate type and quality (resulting from long-term pasture management) on soluble organic C content, microbial biomass C and N contents, and the gross and net rates of soil N mineralization and nitrification. Soil samples were collected at 0–10 cm from two radiata pine (Pinus radiata D. Don) silvopastoral treatments (with an understorey pasture of lucerne, Medicago sativa L., or ryegrass, Lolium perenne L.) and bare ground (control) in an agroforestry field experiment and were incubated under three moisture contents (100, 75, 50% field capacity) and three temperatures (5, 25, 40 °C) in the laboratory. The amount of soluble organic C released at 40 °C was 2.6- and 2.7-fold higher than the amounts released at 25 °C and 5 °C, respectively, indicating an enhanced substrate decomposition rate at elevated temperature. Microbial biomass C:N ratios varied from 4.6 to 13.0 and generally increased with decreasing water content. Gross N mineralization rates were significantly higher at 40 °C (12.9 g) than at 25 °C (3.9 g) and 5 °C (1.5 g g^–1 soil day^–1); and net N mineralization rates were also higher at 40 °C than at 25 °C and 5 °C. The former was 7.5-, 34-, and 29-fold higher than the latter at the corresponding temperature treatments. Gross nitrification rates among the temperature treatments were in the order 25 °C >40 °C >5 °C, whilst net nitrification rates were little affected by temperature. Temperature and substrate type appeared to be the most critical factors affecting the gross rates of N mineralization and nitrification, soluble organic C, and microbial biomass C and N contents. Soils from the lucerne and ryegrass plots mostly had significantly higher gross and net mineralization and nitrification rates, soluble organic C, and microbial biomass C and N contents than those from the bare ground, because of the higher soil C and N status in the pasture soils. Strong positive correlations were obtained between gross and net rates of N mineralization, between soluble organic C content and the net and gross N mineralization rates, and between microbial biomass N and C contents.     

Long-term effect of chemical fertilizer,straw, and manure on labile organic matter fractions in a paddy soil

To assess the effect of long-term fertilization on labile organic matter fractions, we analyzed the C and N mineralization and C and N content in soil, particulate organic matter (POM), light fraction organic matter (LFOM), and microbial biomass. Results showed that fertilizer N decreased or did not affect the C and N amounts in soil fractions, except N mineralization and soil total N. The C and N amounts in soil and its fractions increased with the application of fertilizer PK and rice straw. Generally, there was no significant difference between fertilizer PK and rice straw. Furthermore, application of manure was most effective in maintaining soil organic matter and labile organic matter fractions. Soils treated with manure alone had the highest microbial biomass C and C and N mineralization. A significant correlation was observed between the C content and N content in soil, POM, LFOM, microbial biomass, or the readily mineralized organic matter. The amounts of POM–N, LFOM–N, POM–C, and LFOM–C closely correlated with soil organic C or total N content. Microbial biomass N was closely related to the amounts of POM–N, LFOM–N, POM–C, and LFOM–C, while microbial biomass C was closely related to the amounts of POM–N, POM–C, and soil total N. These results suggested that microbial biomass C and N closely correlated with POM rather than SOM. Carbon mineralization was closely related to the amounts of POM–N, POM–C, microbial biomass C, and soil organic C, but no significant correlation was detected between N mineralization with C or N amounts in soil and its fractions.     

Watershed-scale assessment of soil quality in the loess hills of southwest Iowa

Soil quality is a concept that integrates soil biological, chemical and physical factors into a framework for soil resource evaluation. Conventional tillage practices can result in a loss of soil organic matter and decreased soil quality. The potential for soil quality degradation with tillage may vary depending upon landscape position and the spatial distribution of critical soil properties. Information on how to accurately integrate soil spatial information across fields, landscapes and watersheds is lacking in the literature. The primary objective of this study was to evaluate the long-term effect of conventional and ridge-tillage on soil quality in three small watersheds at the Deep Loess Research Station near the town of Treynor in southwest Iowa. Soil types included Monona silt loams in summit positions, Ida or Dow silt loams in backslope positions, and Napier or Kennebec silt loams in footslope positions. We removed surface soil cores from transects placed along topographic gradients in each watershed and quantified total soil organic C (SOC), total soil N (TN), particulate organic matter C (POM-C) and N (POM-N), microbial biomass C (MB-C), N mineralization potential (PMIN-N), nitrate N, extractable P and K, pH, water-stable macroaggregates (WSA), and bulk density (BD). We used terrain analysis methods to group the data into landform element classes to evaluate the effect of topographic position on soil quality. Results indicate that soil quality is higher under long-term ridge-tillage compared with conventional tillage. Soil quality differences were consistently documented among the three watersheds by: (1) quantification of soil indicator variables, (2) calculation of soil quality index values, and (3) comparison of indicator variable and index results with independent assessments of soil function endpoints (i.e. sediment loss, water partitioning at the soil surface, and crop yield). Soil quality differences under ridge-till were found specifically for the backslope and shoulder landform elements, suggesting that soil quality increases on these landform elements are responsible for higher watershed-scale soil quality in the ridge-tilled watershed.     

Comparison of microbiological methods for evaluating quality and fertility of soil

Routine soil testing procedures that are rapid and accurate are needed to evaluate C and N mineralization in agricultural soils in order to determine soil quality and fertility. Laboratory methods were compared for their usefulness in determining soil microbial biomass and potential activity in a Weswood silty clay loam (fine, mixed, thermic Fluventic Ustochrept) subjected to long-term tillage, crop sequence, and N-fertilizer management practices. The methods included basal soil respiration, net N mineralization during a 10-day incubation, soil microbial biomass C with the chloroform fumigation-incubation technique with and without subtracting a control value, soil microbial biomass N with the chloroform fumigation-incubation technique, substrate-induced respiration, and arginine ammonification. All methods were highly correlated with each other and, therefore, appear to adequately reflect soil microbial biomass and potential activity under laboratory conditions. The longer incubation times used with the basal soil respiration, N mineralization, and microbial biomass C and N assays resulted in higher correlations and lower variation among replications compared to the shorter incubation times used with substrate-induced respiration and arginine ammonification. The relatively rapid procedural time (3 h) required for the latter two assays could make these methods more attractive for routine soil testing, although multiple assays on the same sample may be necessary because these methods are less precise than the incubation methods that require 10 days.     

Influence of diterpenes (colophony and abietic acid) and a triterpene (beta-sitosterol) on net N mineralization,net nitrification,soil respiration,and microbial biomass in birch soil

The aim of this study was to examine the effect of common diterpenes (colophony, abietic acid) and triterpene (beta-sitosterol) on carbon (C) and nitrogen (N) transformations in soil under birch (Betula pendula L.). Samples were taken from the organic layer at two study sites, Kivalo (N-poor soil) and Kerimäki (N-rich soil), and incubated with the above-mentioned terpenes in laboratory conditions. Carbon dioxide evolution (C mineralization), net N mineralization, nitrification, and N and C in microbial biomass were measured. All these terpenes increased C mineralization, but decreased net N mineralization. The potential to decrease net N mineralization depended on amount of terpenes, with a stronger effect at a higher amount. Net nitrification in Kerimäki soil (N-rich soil) decreased but was not completely inhibited by terpenes. Effect of terpenes on soil microbial biomass C and N was not so clear, but they tended to increase both. Our study suggests that higher terpenes can act as a carbon source for soil microbial communities.     

Microbial biomass, enzyme and mineralization activity in relation to soil organic C, N and P turnover influenced by acid metal stress

This study focused on the potential of using soil microbial biomass, enzyme and mineralization activities involved in organic C, N and P turnover, to evaluate the quality of a subtropical agricultural soil affected by long-term acid metal stress. Fractions of C, N and P involved in soil organic matter, microbial biomass and mineralization processes were estimated. Total enzyme activity (FDA) and eight hydrolase activities (xylanase, amylase, β-glucosidase, invertase, N-acteyl-glucosaminidase, urease, alkaline and acid phosphatases) in different decomposition stages of organic C, N and P were selected to characterize the soil functional diversity. These biological datasets were compared with soil metal variables (total contents and free and ligand-complexed ions of Cu, Pb, Zn, Cd, Al and Mn), using principal component analyses, co-inertia and discriminant analyses. The multiple statistics indicate that the metal variables were significantly related with not only general biological factors, but also respective datasets of biomass, enzyme activities and mineralization rates (all P < 0.001). In general, metal variables were inversely related to parameters and indices of microbial biomass C, N and P, FDA and C-related polysaccharidase and heterosidase activities, and P mineralization. As comparison, metal variables exhibited positive relationships with parameters and indices of N-related N-acteyl-glucosaminidase, urease, ammonification, total N mineralization and metabolic quotient, compared with inhibited nitrification. Specifically, free and complexed metal cations showed higher bioavailability than total contents in most cases. Cu, Pb, Al and Mn had different ecotoxicological impacts than Cd and Zn did. Stepwise regression models demonstrated that metal variables are key stress factors, but most of them excluded soil pH. Furthermore, spatial distribution in land uses and of sampling sites clearly separated the soil samples in these models (P < 0.001). We conclude that such a statistical analysis of microbiological and biochemical indices can provide a reliable and comprehensive indication of changes in soil quality and organic nutrient cycling, after exposure to long-term acid metal stress.     

Modelling mineralization of plant residues on soil: effect of physical protection

A mechanistic dynamic model (Verberne et al. 1990) was used to simulate mineralization of white-clover materials in a loam (25% clay) and a sandy loam soil (5% clay). I tested the model‘s ability to simulate the observed temporal patterns and to take account of altered physical protection as affected by soil compaction or spatial residue distribution. With default parameter values, the model greatly overestimated net N mineralization. The model was very sensitive to changes in the C/N ratio of the microbial biomass. Reducing this value from 8.0 to 6.0 improved the model performance. Nevertheless, initial N mineralization was appreciably overestimated. Two hypotheses may explain the discrepancies: (1) the C/N ratio of the microbial biomass is initially low (3–4) and gradually increases because of a succession from bacterial- to fungal-dominated biomass (H ₁); (2) the C/N ratio of the substrates first attacked by microorganisms, i.e. water-soluble components such as sugars and free amino acids, is higher than the average value (6.0) assumed for the readily decomposable fraction (H ₂). Conceptually, this fraction originally included N-containing polymers (proteins and nucleic acids), which in large part are water insoluble and probably attacked somewhat later than the monomers. Modification of the model, either by implementing a dynamic C/N ratio of the biomass and the effect of faunal grazing or by increasing the C/N ratio of the easily decomposable fraction, improved the model performance substantially. The two hypotheses need to be tested experimentally. The model adequately simulated measured effects of spatial residue distribution and soil compaction on N mineralization after adjustment or parameter values regulating physical protection of microbial biomass and metabolites. Moreover, there was a good agreement between simulated and measured microbial biomass N in the two soils. Received: 9 December 1996     

Excessive Nitrogen Inputs in Intensive Greenhouse Cultivation May Influence Soil Microbial Biomass and Community Composition

Intensive greenhouse vegetable‐production systems commonly utilize excessive fertilizer inputs that are inconsistent with sustainable production and may affect soil quality. Soil samples were collected from 15 commercial greenhouses used for tomato production and from neighboring fields used for wheat cropping to determine the effects of intensive vegetable cultivation on soil microbial biomass and community structure. Soil total nitrogen (N) and organic‐matter contents were greater in the intensive greenhouse tomato soils than the open‐field wheat soils. Soil microbial carbon (C) contents were greater in the greenhouse soils, and soil microbial biomass N showed a similar trend but with high variation. The two cropping systems were not significantly different. Soil microbial biomass C was significantly correlated with both soil total N and soil organic matter, but the relationships among soil microbial biomass N, soil total N, and organic‐matter content were not significant. The Biolog substrate utilization potential of the soil microbial communities showed that greenhouse soils were significantly higher (by 14%) than wheat soils. Principal component (PC) analysis of soil microbial communities showed that the wheat sites were significantly correlated with PC1, whereas the greenhouse soils were variable. The results indicate that changes in soil microbiological properties may be useful indicators for the evaluation of soil degradation in intensive agricultural systems.     

Nitrogen mineralization in sub‐tropical paddy soils in relation to soil mineralogy,management, pH,carbon, nitrogen and iron contents

The nitrogen (N) requirement for paddy rice cultivated in Bangladesh amounts to approximately 80 kg N ha^?1. Lack of knowledge on N mineralization from soil organic matter leads farmers to meet this N requirement exclusively by costly mineral fertilizers, which have typically an efficiency of less than 40%. We assessed to what extent routinely analysed soil properties (N and carbon (C), texture, pH, extractable iron (Fe), aluminium (Al) and manganese (Mn), soil mineralogy and length of the annual inundation period) are able to predict net aerobic and anaerobic N mineralization in paddy soils. Both soil N and C correlated positively with the aerobic but not with the anaerobic N mineralization rate. Instead, relative anaerobic N mineralization showed a significant negative correlation with soil N content. We observed no significant influence of clay mineralogy on soil N mineralization. Aerobic but not anaerobic N mineralization increased with length of the annual inundation period while the proportion of the soil N that was mineralized during 120 days decreased. The large clay content of fields that are inundated for 9–10 months annually explains the co‐occurrence of large soil N contents and relatively small N mineralization rates in these fields. However, variation in texture did not explain variation in N mineralization of soils with inundation periods of 3–8 months. Instead, the anaerobic N mineralization correlated positively with Na pyrophosphate‐extractable Fe and negatively with pH (both at P < 0.01). Thus, pH and Fe content, rather than soil N content, clay mineralogy or texture, explained the substantial variation in anaerobic N mineralization of paddy soils in Bangladesh inundated for 3–8 months. It is not known if these relationships between net evolution of ammonium in soil and pH and Fe content are causal or indirect. Elucidation of these mechanisms would greatly further our comprehension of the biochemistry of the young ‘floodplain soils' with relatively low content of pedogenic oxides throughout southeast Asia.     

Potential soil enzyme activities are decoupled from microbial activity in dry residue-amended soil

Extracellular enzymes play an important role in the microbial acquisition of carbon (C) and organically bound nutrients, such as nitrogen (N). The objective of the present study was to investigate the effect of different soil moisture contents on potential soil enzyme activities (β-glucosidase and protease), microbial biomass and activity. Soil incubations were carried out with gravimetric moisture contents (GMC) ranging from 0.8 (air-dry) to 30%. After 14 days, respiration, net N mineralization and potential enzyme activities were lowest at GMC below 10% in the unamended samples. In the residue-amended soil, however, respiration and net N mineralization were highest at GMC of 20% or more, while potential β-glucosidase and protease activity were highest at GMC of 10% or less. Increasing the moisture content of air-dry soil after 14 days of incubation resulted in significantly reduced β-glucosidase activity, but increased protease activity. With the exception of the high potential β-glucosidase activity in the residue-amended dry soil, enzyme activities were well correlated with microbial biomass and ergosterol, a biomarker for fungal biomass. Therefore, our results suggest that across the different GMC, protease activity was mainly dependent on the continuous production by microorganisms, while β-glucosidase accumulated in the dry soil due to an increased half-life, which was the result of interactions with soil colloids. Shifts in microbial community composition may also have contributed to the observed differences.     

Fate of nitrogen from crop residues as affected by biochemical quality and the microbial biomass

Net mineralization of N from a range of shoot and root materials was determined over a period of 6 months following incorporation into a sandy-loam soil under controlled environment conditions. Biochemical “quality” components of the materials showed better correlation with net N mineralization than did gross measures of the respiration and N content of the soil microbial community during decomposition. The quality components controlling net N mineralization changed during decomposition, with water-soluble phenolic content significantly correlated with net N mineralization at early stages, and water-soluble N, followed by cellulose at later stages. C-to-N and total N were correlated with net N mineralization towards the end of the incubation only. Cumulative microbial respiration during the early stages of decomposition was correlated with net N mineralization measured after 2 months, at which time maximum net N mineralization was recorded for most residues. However, there was no relationship between microbial-N and net N mineralization. Biochemical quality factors controlling the C and N content of the residue remaining at the end of the incubation as light fraction organic matter (LFOM) were also investigated. Both C and N content of LFOM derived from the residues were correlated with residue cellulose content, and the chemical characteristics of LFOM were highly correlated with those of the original plant material. Incorporation of low cellulose, high water-soluble N-containing shoot residues resulted in more N becoming mineralized than had been added in the residues, demonstrating that net mineralization of native soil organic matter had occurred. Large amounts of N were lost from the mineral-N pool during the incubation, which could not be accounted for by microbial immobilization.     

Soil microbial biomass, activity and nitrogen transformations in a turfgrass chronosequence

Understanding the chronological changes in soil microbial properties of turfgrass ecosystems is important from both the ecological and management perspectives. We examined soil microbial biomass, activity and N transformations in a chronosequence of turfgrass systems (i.e. 1, 6, 23 and 95 yr golf courses) and assessed soil microbial properties in turfgrass systems against those in adjacent native pines. We observed age-associated changes in soil microbial biomass, CO₂ respiration, net and gross N mineralization, and nitrification potential. Changes were more evident in soil samples collected from 0 to 5 cm than the 5 to 15 cm soil depth. While microbial biomass, activity and N transformations per unit soil weight were similar between the youngest turfgrass system and the adjacent native pines, microbial biomass C and N were approximately six times greater in the oldest turfgrass system compared to the adjacent native pines. Potential C and N mineralization also increased with turfgrass age and were three to four times greater in the oldest vs. the youngest turfgrass system. However, microbial biomass and potential mineralization per unit soil C or N decreased with turfgrass age. These reductions were accompanied by increases in microbial C and N use efficiency, as indicated by the significant reduction in microbial C quotient (qCO₂) and N quotient (qN) in older turfgrass systems. Independent of turfgrass age, microbial biomass N turnover was rapid, averaging approximately 3 weeks. Similarly, net N mineralization was ∼12% of gross mineralization regardless of turfgrass age. Our results indicate that soil microbial properties are not negatively affected by long-term management practices in turfgrass systems. A tight coupling between N mineralization and immobilization could be sustained in mature turfgrass systems due to its increased microbial C and N use efficiency.     

Soil microbial properties under N and P additions in a semi-arid, sandy grassland

Surface (0–15 cm) soil samples were collected from a semi-arid, sandy grassland in Keerqin Sandy Lands, Northeast China to study changes in soil microbial and chemical properties after five consecutive years of nitrogen (N) and phosphorus (P) additions. Nitrogen and P additions and their interactions negligibly affected soil organic carbon and total N contents, while P addition significantly increased soil total P content. Soil pH was significantly decreased by N addition, which significantly increased net nitrification rate, whereas it did not affect net N mineralization rate. No significant effects of N and P additions and their interactions on basal respiration were detected. In addition, N addition significantly decreased microbial biomass C (MBC) and N, and thus microbial quotient, but increased dissolved organic C and microbial metabolic quotient due to the significant decrease of MBC. Our results suggest that in the mid-term the addition of N, but not P, can change soil microbial properties, with a possible decline in soil quality of semi-arid, sandy grasslands.     

Microbial biomass and C and N transformations in forest floors under European beech, sessile oak, Norway spruce and Douglas-fir at four temperate forest sites

The purpose of this research was to compare soil chemistry, microbially mediated carbon (C) and nitrogen (N) transformations and microbial biomass in forest floors under European beech (Fagus sylvatica L.), sessile oak (Quercus petraea (Mattuschka) Lieblein), Norway spruce (Picea abies (L.) Karst) and Douglas-fir (Pseudotsuga menziesii (Mirbel) Franco) at four study sites. We measured soil chemical characteristics, net N mineralization, potential and relative nitrification, basal respiration, microbial and metabolic quotient and microbial biomass C and N under monoculture stands at all sites (one mixed stand). Tree species affected soil chemistry, microbial activities and biomass, but these effects varied between sites. Our results indicated that the effect of tree species on net N mineralization was likely to be mediated through their effect on soil microbial biomass, reflecting their influence on organic matter content and carbon availability. Differences in potential nitrification and relative nitrification might be related to the presence of ground vegetation through its influence on soil NH₄ and labile C availability. Our findings highlight the need to study the effects of tree species on microbial activities at several sites to elucidate complex N cycle interactions between tree species, ground vegetation, soil characteristics and microbial processes.     

Carbon and nitrogen turnover in two acid forest soils of southeast Australia as affected by phosphorus addition and drying and rewetting cycles

The effects of adding P and of drying and rewetting were studied in two acid forest soils from southeast Australia. The soils were a yellow podzolic with a low soil organic matter content (3.75% C) and a red earth with a high organic matter content (13.5% C). C and N mineralization and microbial C and N contents were investigated in a laboratory incubation for 151 days. Microbial C and N were estimated by a hexanol fumigation-extraction technique. Microbial C was also determined by substrate-induced respiration combined with a selective inhibition technique to separate the fungal and the bacterial biomass. The results obtained by the selective inhibition technique were not conclusive. Adding P to the soil and drying and rewetting the soil reduced microbial N. This effect was more pronounced in rapidly and frequently dried soils. Microbial C was generally less affected by these treatments. Compared with the control, the addition of P caused a reduction in respiration in the red earth (-13%) but an increase in the yellow podzolic soil (+12%). In the red earth net N mineralization was highest following the addition of P. In the yellow podzolic soil highest N mineralization rates were obtained when the soil was subjected to drying and rewetting cycles. In both soils increased N mineralization was associated with a decrease in microbial N, indicating that the mineralized N was of microbial origin. Nitrification decreased with rapid drying and rewetting. The addition of P promoted heterotrophic nitrification in both soils.     

C and N turnover in structurally intact soils of different texture

The turnover of native and applied C and N in undisturbed soil samples of different texture but similar mineralogical composition, origin and cropping history was evaluated at −10 kPa water potential. Cores of structurally intact soil with 108, 224 and 337 g clay kg⁻¹ were horizontially sliced and ¹⁵N-labelled sheep faeces was placed between the two halves of the intact core. The cores together with unamended treatments were incubated in the dark at 20 °C and the evolution of CO₂-C determined continuously for 177 d. Inorganic and microbial biomass N and ¹⁵N were determined periodically. Net nitrification was less in soil amended with faeces compared with unamended soil. When adjusted for the NO₃-N present in soil before faeces was applied, net nitrification became negative indicating that NO₃-N had been immobilized or denitrified. The soil most rich in clay nitrified least N and ¹⁵N. The amounts of N retained in the microbial biomass in unamended soils increased with clay content. A maximum of 13% of the faeces ¹⁵N was recovered in the microbial biomass in the amended soils. CO₂-C evolution increased with clay content in amended and unamended soils. CO₂-C evolution from the most sandy soil was reduced due to a low content of potentially mineralizable native soil C whereas the rate constant of C mineralization rate peaked in this soil. When the pool of potentially mineralizable native soil C was assumed proportional to volumetric water content, the three soils contained similar proportions of potentially mineralizable native soil C but the rate constant of C mineralization remained highest in the soil with least clay. Thus although a similar availability of water in the three soils was ensured by their identical matric potential, the actual volume of water seemed to determine the proportion of total C that was potentially mineralizable. The proportion of mineralizable C in the faeces was similar in the three soils (70% of total C), again with a higher rate constant of C mineralization in the soil with least clay. It is hypothesized that the pool of potentially mineralizable C and C rate constants fluctuate with the soil water content.     

Soil microbial biomass and activity in Chinese tea gardens of varying stand age and productivity

Tea (Camellia sinensis) is a globally important crop and is unusual because it both requires an acid soil and acidifies soil. Tea stands tend to be extremely heavily fertilized in order to improve yield and quality, resulting in a great potential for diffuse pollution. The microbial ecology of tea soils remains poorly understood; an improved understanding is necessary as processes affecting nutrient availability and loss pathways are microbially mediated. We therefore examined the relationships between soil characteristics (pH, organic C, total N, total P, available P, exchangeable Al), the soil microbial biomass (biomass C, biomass ninhydrin-N, ATP, phospholipid fatty acids—PLFAs) and its activities (respiration, net mineralization and nitrification). At the Tea Research Institute, Hangzhou (TRI), we compared fields of different productivity levels (low, medium and high) and at Hongjiashan village (HJS) we compared fields of different stand age (9, 50 and 90 years). At both sites tea soils were compared with adjacent forest soils. At both sites, soil pH was highest in the forest soil and decreased with increasing productivity and age of the tea stand. Soil microbial biomass C and biomass ninhydrin-N were significantly affected by tea production. At TRI, microbial biomass C declined in the order forest>low>high>middle production and at HJS in the order stand age 50>age 9>forest>age 90. Soil pH had a strong influence on the microbial biomass, demonstrated by positive linear correlations with: microbial biomass C, microbial biomass ninhydrin-N, the microbial biomass C:organic C ratio, the microbial biomass ninhydrin-N:total N ratio, the respiration rate and specific respiration rate. Above pH_(KCl) 3.5 there was net N mineralization and nitrification, and below this threshold some samples showed net immobilization of N. A principal component (PC) analysis of PLFA data showed a consistent shift in the community composition with productivity level and stand age. The ratio of fungal:bacterial PLFA biomarkers was negatively and linearly correlated with specific respiration in the soils from HJS (r²=0.93, p=0.03). Our results demonstrate that tea cultivation intensity and duration have a strong impact on the microbial community structure, biomass and its functioning, likely through soil acidification and fertilizer addition.     

Soil microbial biomass, activity and potential nitrogen mineralization in a pasture: Impact of stock camping activity

Grazing animals recycle a large fraction of ingested C and N within a pasture ecosystem, but the redistribution of C and N via animal excreta is often heterogeneous, being highest in stock camping areas, i.e., near shade and watering sources. This non-uniform distribution of animal excreta may modify soil physical and chemical attributes, and likely affect microbial community eco-physiology and soil N cycling. We determined microbial population size, activity, N mineralization, and nitrification in areas of a pasture with different intensity of animal excretal deposits (i.e., stock camping, open grazing and non-grazing areas). The pasture was cropped with coastal bermudagrass (Cynodon dactylon L.) and subjected to grazing by cattle for 4 y. Soil microbial biomass, activity and N transformations were significantly higher at 0-5 cm than at 5-15 cm soil depth, and the impacts of heterogeneous distribution of animal excreta were more pronounced in the uppermost soil layer. Microbial biomass, activity and potential net N mineralization were greater in stock camping areas and were significantly correlated (r²≈0.50, P<0.05) with the associated changes in total soil C and N. However, gross N mineralization and nitrification potential tended to be lower in stock camping areas than in the open grazing areas. The lower gross N mineralization, combined with greater net N mineralization in stock camping areas, implied that microbial N immobilization was lower in those areas than in the other areas. This negative association between microbial N immobilization and soil C is inconsistent with a bulk of publications showing that microbial N immobilization was positively related to the amount of soil C. We hypothesized that the negative correlation was due to microbial direct utilization of soluble organic N and/or changes in microbial community composition towards active fungi dominance in stock camping areas.     

Multivariate effects of plant canopy, soil physico-chemistry and microbiology on Sclerotinia stem rot of soybean in relation to crop rotation and urban compost amendment

The effects of canopy, soil physico-chemical and microbiological variables on Sclerotinia stem rot (SSR) on soybean were assessed in two soils (clay loam and sandy loam) using multiple regression and canonical redundancy analysis (RDA) and their partial form to control for the rotation (2 or 3-y-corn/soybean monoculture) and fertilization (mineral/urban compost) or spatial variables effects. The models revealed the minimal sets of variables that best explain the variance of the survival of Sclerotinia sclerotiorum’s sclerotia, carpogenic germination, disease severity and their associations. In clay loam, the 3-y-corn rotation reduced disease severity mainly through the reduction of weed biomass that favoured carpogenic germination. Urban compost has a conducive effect explained by a better soil surface drainage. Additionally, total N was found suppressive to sclerotial survival. In sandy loam, the carpogenic germination was negatively correlated with high C mineralization quotient and aggregate stability but correlated positively with Ca. Sclerotial survival was negatively correlated with pH and Ca, and positively correlated with biological fertility index. Aggregate stability, Ca and pH were associated with the urban compost. The regression and RDA analyses allowed to identify key variables that drived SSR development and explain their relationship with the cultural practices, soil health, as well as the spatial variation of disease variables.