Belowground ectomycorrhizal fungal communities respond to liming in three southern Swedish coniferous forest stands

In this study we report on changes in the belowground ectomycorrhizal fungal communities in southern Swedish coniferous forests as a consequence of liming with 3–7 ton limestone per hectare 16 years prior to the study.     

Distribution of ectomycorrhizas and ectomycorrhizal fungal inoculum with soil depth in a birch forest

The distributions of ectomycorrhizas and ectomycorrhizal fungal inoculum with soil depth (0–45 cm) were determined in a 40-year-oldBetula platyphylla var.japonica forest. Mycorrhizal and non-mycorrhizal fine roots were measured in each soil core sample that was collected at soil depths of 0–5, 5–10, 10–15, 15–20, 20–25, 30–35, and 40–45 cm. The ectomycorrhizas were mainly distributed (>50%) in the top soil (0–5 cm) of organic forest floor horizons. Below 5 cm the quantity of ectomycorrhizas decreased sharply. The percentage of fine roots which were ectomycorrhizal gradually declined with the depth of soil. The ectomycorrhizal fungal inoculum was evaluated by a bioassay method, measuring the lengths of the entire root system and of the ectomycorrhizal roots of birch seedlings planted in each soil sample. The soil samples were collected from 0–5, 10–15, 20–25, 30–35, and 40–45 cm depths of the soil profile. Ectomycorrhizal formation on birch seedling roots in the bioassay was high in both the soil depth intervals 0–5 cm and 10–15 cm, while the amount was lower in the soil depth interval from 20–45 cm. The results of these investigations show that the amount of the ectomycorrhizas in soil, and the ectomycorrhizal fungal inoculum potential as determined by bioassay, are not always consistent with each other.     

奥氏蜜环菌杂交双倍体子实体的人工诱导

用产自北半球的奥氏蜜环菌Armillaria ostoyae(Romagn.) Herink单倍体菌株进行杂交，选育出25个增效交配的杂交双倍体菌株，使用3种培养料，分别在全自动和半自动人工气候室中培养诱导子实体。结果表明，在全自动人工气候室中，奥氏蜜环菌杂交双倍体产生子实体的概率是47％，而半自动人工气候室中的概率为20％。从杂交子实体中都分离到了F1代单倍体菌株。环境条件分析表明湿度是蜜环菌子实体发育的重要影响因子；培养条件分析表明蜜环菌干菌丝体可促进蜜环菌的营养生长和子实体发育。     

Purification,structural elucidation and antitumor activity of a novel mannogalactoglucan from the fruiting bodies of Lentinus edodes

A mannogalactoglucan, named LE-MGG, was isolated from the basidiocarps of Lentinus edodes by hot water-extraction, ethanol precipitation anion exchange chromatography, and further purified by gel-permeation chromatography (GPC). Its structural features were investigated by high performance liquid chromatography (HPLC), high performance gel-permeation chromatography (HPGPC), methylation analysis, periodate oxidation-Smith degradation, and by IR and NMR spectroscopy, including two-dimensional (2D) NMR. HPLC analysis revealed that LE-MGG contained mannose–galactose–glucose in the molar ratio of 10:18:72. GPC and HPGPC showed that LE-MGG was a homogeneous fraction (d = 1.34) and its molecular weight was estimated to be 18 kDa. Chemical and spectroscopic studies indicated that LE-MGG consists of (1 → 6)-, (1 → 4)- and (1 → 3)-linked β-d-glucopyranosyl residues, (1 → 6)-linked α-d-galactopyranosyl residues, (1 → 3,6)- and (1 → 2,4)-linked α-d-mannopyranosyl residues and terminal residues of β-d-glucopyranosyl. Cytotoxicity assay showed that LE-MGG presented higher antitumor activities against S-180 cell with a dose-dependent manner, and exhibited lower cytotoxicity to carcinoma HCT-116 and HT-29 cells. Our studies showed also that LE-MGG presented antitumor bioactivities on Sarcoma 180 solid tumor cell implanted in Kunming mice. This finding suggests that mannogalactoglucan should be explored as potential antitumor agents and could be potentially applied as a natural antitumor drug.     

RETRACTED ARTICLE: Abundance of Collembola collected from ectomycorrhizal hyphal mats and fruiting bodies of Tricholoma matsutake

Collembolans collected from hyphal mat soil and fruit bodies of Tricholoma matsutake were examined to investigate whether mycophagous microarthropods are a potential insect pest of this fungus in forest soils. The number of collembolans collected in hyphal mat soil did not differ significantly from that in adjacent nonmat soil. Fungal materials contained in the gut of collembolans consisted mostly of hyphal fragments of dematiaceous fungi and unknown basidiomycetes. There were few collembolans on the fruit bodies of T. matsutake, which has the largest fruit body of the fungi at the study site. Our findings suggested that collembolans are not significant feeders on the hyphal mat and fruit body of T. matsutake. An erratum to this article is available at .     

武汉市黄陂区素山寺森林公园常见森林群落的 植物多样性和结构分析

为了做好森林抚育前的植物群落调查,在黄陂区素山寺森林公园选取 6个常见的森林群落进行木本植物调查, 并对植物多样性和群落结构进行了分析 。泛热带和北温带分布的科和属占比均超过 50%,表明本地植物区系呈现明显的 过渡性 。对比乔木层、灌木层和幼苗层的香农威纳指数和辛普森指数,灌木层和幼苗层的多样性均高于乔木层,且幼苗层 的多样性在多个样地中最高 。相较于灌木层和幼苗层,乔木层的优势种表现出更高的相似性 。使用基于算术平均值的非 权重成对组法(UPGMA)对 6个样地乔木层进行聚类分析,主要分成两大分支,一个分支是白栎构成的落叶阔叶林;另一分 支是含有杉木的针阔混交林,针阔混交林又细分成栓皮栎为主的混交林和杉木为主的混交林 。对比各样地的径级结构,栎 类林的径级出现明显的间断,这可能是人为砍伐或者森林演替过程出现树木 自 然死亡形成的 。针叶林占优的群落乔木径 级高峰普遍右偏,表明针叶林树龄整体偏小 。建议在抚育砍伐前研究植被类型、植物多样性和径级等方面的差异,评估砍 伐行为对森林固碳能力的影响;森林抚育要考虑到不同林斑的差异,根据各自的特点采取合适的抚育方式。     

Spatial distribution of the fruiting bodies of Agaricales in a Japanese red pine (Pinus densiflora) forest

To examine the effect of the spatial distribution of litter and intergeneric interaction on the spatial distribution of agaric fruiting bodies, we surveyed spatial distribution of fruiting bodies of Agaricales in a mixed forest dominated by Pinus densiflora (Sieb et Zucc.) from July 1999 to July 2002. Three 10 × 10-m plots with different vegetation and positions on a slope were established: Top-Mixed, Top-Pinus, and Bottom-Pinus. Litter thickness in the Top-Mixed plot was the thinnest among the three plots. During the study, we counted 3563 fruiting bodies in 27 genera from 13 families. The dominant genera were Collybia, Marasmius, Mycena, Rhodophyllus, and Lactarius, and showed an intrageneric aggregated distribution at a quadrat size of 1 m². Collybia and Lactarius formed fruiting bodies in arcs. The spatial distribution of Collybia, Marasmius, and Lactarius fruiting bodies tended to overlap in two consecutive years. In the Top-Mixed plot, the number of Marasmius fruiting bodies increased with increasing litter thickness, while that of Lactarius decreased with litter thickness. Values of C′_δ indicating degree of overlap were calculated for particular pairs of dominant fungal genera and the values differed between plots and years: for example, fruiting bodies of Marasmius and Mycena in the Bottom-Pinus plot were distributed aggregately in 1999 and 2000, but randomly in 2001, while they were distributed segregatedly in the Top-Pinus plot every year. Our study suggests that the spatial distribution of fungal fruiting bodies is affected by the distribution of litter in and between plots and that fungal flora is affected by vegetation.     

Response of fungal and plant communities to management-induced overstorey changes in montane forests of the Western Carpathians

The effect of forest management on biodiversity is a crucial issue for sustainable forestry and nature conservation. However, the ways in which management affects macrofungal and plant communities and diversity of mountain temperate forests still remain poorly understood. We performed a random sampling stratified by stand age and stand type on the sites of temperate montane fir–beech forests. Diversity of macrofungi and the vascular plant understorey in beech- and spruce-dominated managed stands was investigated and compared to primeval forests located in the Po?ana Biosphere Reserve, Western Carpathians. Both the vascular plant and the macrofungal communities were altered by management, and the response of the macrofungal species (especially wood-inhabiting fungi) was more pronounced in terms of species composition change. Species turnover evaluation seems to be an important tool of forest natural status assessment, because alpha diversity did not change as much as species composition. Certain species of Carpathian primeval forests were confirmed as good indicators for natural forest change; others were proposed. Species pool and mean number of species per plot were the highest in unmanaged fir–beech forests, and species diversity significantly decreased in spruce plantations. The number of species decreased significantly due to the change of canopy tree species composition only in the macrofungal communities. As an outcome for forest management, we recommend keeping mixed forests involving all natural tree species and providing at least a minimal amount of dead wood necessary for wood-inhabiting organisms and leaving some area of unmanaged natural forests within complexes of managed stands.     

Development and activity of early saproxylic fungal communities in harvested and unmanaged boreal mixedwood stands

Limited scientific information is currently available regarding saproxylic fungal communities in the boreal forest of North America. We aimed to characterize the community development, richness and activity of saproxylic fungi on fresh wood in harvested and unmanaged boreal mixedwood stands of northwestern Québec (Canada). Fresh wood blocks (n = 480) of balsam fir (Abies balsamea (L.) Mill.) and trembling aspen (Populus tremuloides Michx.) were placed on the forest floor in a range of stand conditions (n = 24). Blocks were harvested every 6 months for up to 30 months and characterized for species composition and richness (PCR–DGGE, DNA sequencing), respiration, wood density and lignin and cellulose content. Colonization by a wide range of functional groups proceeded rapidly under different stand conditions. We detected a total of 35 different fungal operational taxonomic units, with the highest species richness at the wood block level being observed within the first 12 months. No differences in community composition were found between wood host species or among stand conditions. However, the variability in fungal communities among blocks (β diversity) was lower on trembling aspen wood compared with balsam fir and decreased over time on trembling aspen wood. Also, fungal activity (respiration and wood decomposition) increased on trembling aspen wood blocks and species richness decreased on balsam fir wood over time in partial-cut sites. The overlap in tree composition among stands, the high volume of logs and the recent management history of these stands may have contributed to the similarity of the saproxylic fungal community among stand types and disturbances.     

Ectomycorrhizal fungal communities of Quercus liaotungensis along different successional stands on the Loess Plateau,China

Although Quercus liaotungensis forest is an important component of Loess Plateau forest ecosystems, little is known about the ectomycorrhizal fungal (EMF) symbiosis of Q. liaotungensis in this ecosystem. Here we investigated EMF communities of Q. liaotungensis along three successional stands on the central Loess Plateau (Yan’an, China): a seedling stand (1 to 3-year-old seedlings under a Populus davidiana forest stand), a young tree stand (20 to 30-year-old Q. liaotungensis forest stand), and a mature tree stand (50 to 70-year-old Q. liaotungensis forest stand). In each stand, the Q. liaotungensis roots were sampled, then EMF communities were examined on the basis of EMF morphotyping, PCR–RFLP, and DNA sequencing. In total, 70 EMF species were observed, and the total richness of estimated species exceeded 100 EMF species. The EMF community was composed of a few common taxa (approx. 7 %) and many rare taxa (approx. 61 %). EMF richness in young and mature trees was higher than in seedlings. EMF communities of young and mature trees were more similar than those of seedlings and trees. Nonmetric multidimensional scaling ordinations of the EMF community revealed more separation among Q. liaotungensis of different age. This study provides preliminary insight into the taxonomic diversity of EMF of Q. liaotungensis along different successional stands on the Loess Plateau.     

Fungal auxin overproduction affects the anatomy of Hebeloma cylindrosporum-Pinus pinaster ectomycorrhizas

We studied the effect of fungal auxin overproduction on the growth polarity of cortical cells in pine mycorrhizas by comparing the anatomy of Pinus pinaster (Ait.) Sol. mycorrhizas formed by an IAA-overproducing mutant of Hebeloma cylindrosporum Romagnesi or by the corresponding wild type with non-mycorrhizal short roots. Both wild- type and mutant strains induced an increase in root diameter that was mostly a result of the influence of the fungus on root cortical development. Both strains affected growth polarity of P. pinaster cortical cells and induced a change in their shape. The main modifications were a large reduction in axial diameter and an increase in the radial diameter of the cortical cells. The modifications were more marked with the mutant than with the wild type. The mutant induced a 43% reduction in cortical cell elongation and a 35% increase in radial diameter, whereas the corresponding changes induced by the wild type were 30 and 10%, respectively. The volume of cortical cells in mature mycorrhizas was generally lower than in uninoculated short roots indicating that wild-type and mutant strains induced a reorientation of cortical cell growth but did not induce an increase in turgor pressure of the cells. Immunolocalization allowed visualization of alpha-tubulin in root cortical cells, but no obvious modification in alpha-tubulin distribution was detected as a consequence of symbiosis establishment. Likewise, cytochemical localization of polysaccharides in cortical cell walls did not show significant modification following symbiosis establishment and Hartig net formation. The only noticeable modification was a reduction in cortical cell wall thickness in mycorrhizas compared with uninoculated short roots. The possible involvement of fungal auxin in the observed modifications is discussed.     

Ectomycorrhizal fungal communities of rehabilitated bauxite mines and adjacent,natural jarrah forest in Western Australia

Species richness and species composition of ectomycorrhizal (EM) fungi were compared among rehabilitated mine sites and unmined jarrah forest in southwest Western Australia. Species richness, measured in 50 m × 50 m plots, was high. In the wetter, western region, mean species richness per plot in 16-year-old rehabilitated mine sites (63.7 ± 2.5, n = 3) was similar to that of unmined jarrah forest (63.6 ± 9.6, n = 9). In the drier, eastern region, species richness in 12-year-old rehabilitated mine sites (40.3 ± 2.1, n = 3) approached that of nearby forest (52.4 ± 9.3, n = 9). Species composition was analysed by detrended correspondence analysis. Rehabilitated sites of similar age clustered together in the analysis and species composition was closer to the native jarrah forest in the older rehabilitated plots. In unmined forest, species composition of fungal communities in the wetter, western region was different from communities in the drier, eastern region.     

Impact of wildfire intensity and logging on fungal and nitrogen-cycling bacterial communities in British Columbia forest soils

Wildfire and logging are common disturbances in the forests of northwestern North America, causing changes in soil chemistry and microbiology, including fungal and nitrogen-cycling bacterial communities. These organisms play key roles in nutrient cycling, and affect the regeneration of tree seedlings after disturbance. We studied the effects of wildfire and logging on fungal and nitrogen-cycling communities in the rhizosphere of 16 month-old Douglas-fir seedlings as they regenerated in burned and logged soils. Seeds were planted against root windows that were set up vertically in the soil, with a removable front panel used to access the seedling rhizosphere soil surface. Windows were established in control, lightly burned, and severely burned plots, as well as two types of logged plots (clearcut and screefed clearcut). Soil scrapings from the root window–soil interface were taken and the structure of fungal and nitrogen-cycling communities was resolved using length-heterogeneity PCR (LH-PCR) of fungal nuclear ribosomal RNA genes, and terminal restriction fragment length polymorphism (T-RFLP) analysis of nifH and nosZ genes. We found striking differences in the community structure of fungal, denitrifying, and N-fixing communities in response to burning and logging. With the exception of clearcut and screefed clearcut, which were generally similar, each treatment had a unique impact on community structure for these genes. Burning and logging also impacted the relative richness and evenness of these communities. Fungal relative richness and evenness increased in response to logging and severe burning, while denitrifier relative richness and evenness increased in all disturbance treatments, and N-fixing bacterial relative richness and evenness decreased in response to burning. The greatest differences in microbial community structure, relative richness, and evenness were found in the comparisons of lightly burned and logged treatments. The results suggest that the presence of an intact forest floor influences soil microbial communities less than the presence of living trees.     

Isolation of symbiont and associated fungi from ectomycorrhizas of Sitka spruce

Isolation of symbiont and associated fungi from ectomycorrhizas of Sitka spruce from three Irish forest plantations is described. Frequent emergence of dark sterile mycelia and Oidiodendron spp., predominantly O. maius, restricted the recovery of potential symbionts. Inhibition of the former by benomyl resulted in a sixfold increase in basidiomycetes isolated. Pure culture syntheses confirmed the ectomycorrhizal ability of potential symbiont isolates and demonstrated the parasitic nature of dark sterile mycelial types. Antagonism of Mycelium radicis atrovirens, Phytophthora cinnamomi and Heterobasidion annosum by O. maius observed in paired cultures supports the possible involvement of this species in biological control of conifer root pathogens.     

Structure of Quercus gambelii communities in the Lincoln National Forest,New Mexico,USA

The structure of eight Quercus gambelii (Gambel's oak) communities in the Lincoln National Forest, New Mexico, USA were examined. Belt transects were used to estimate the density and basal area of the trees and the density of juvenile woody plants. In addition, diameter size-class distributions of Q. gambelii were examined to determine community development. The communities were estimated to be 109–137 years old and mid to late-successional. Total tree density was 3586–6480 plants/ha, with Q. gambelii having a relative density of 94–100%. Total basal area was 20.1–42.0 m²/ha, with Q. gambelii relative basal area 82–100%. The density and basal area of all other species present was low. Quercus gambelii juvenile density ranged from 1760 to 9160 plants/ha. Juveniles of all other species found were zero to 847 plants/ha. Based on Weibull analyses, all of the diameter size-class distributions of Q. gambelii were unimodal. There were few or no individuals in the smallest (1–5 cm) diameter size-classes, suggesting that recruitment of small Q. gambelii plants into the adult population may be below the replacement rate for these stands. Pooled size-class distributions for the other species were non-normal with most individuals in the smallest diameter size-classes. Low light levels below the canopy, a lack of canopy gaps, or browsing by Cervus elaphus (elk = red deer) may be the primary causes of poor recruitment because there were large numbers of Q. gambelii juveniles, but these individuals are not entering the small-tree size-class in any of the communities.     

Development of fruiting bodies of large tree type of Gremmeniella abietina var. abietina and timing of infection on Scots pine inn northern Finland

The formation and maturing of the large tree type Gremmeniella abietina var. abietina fruiting bodies and their sporulation were investigated for 3 years on Scots pine (Pinus sylvestris) in northern Finland. This was done by monthly assessment of shoots in the field and in the laboratory. Infection caused by G. abietina var. abietina was dated on Scots pine by monthly covering with pollination bags and exposing branches during the growing season. Pycnidia appeared between August and September, 1 year after infection, and they started to release conidia between late June and early July, 2 years after infection. Fresh pycnidia and microconidia were formed during the following August and September in the infected shoots. The causal large tree type of G. abietina var. abietina did not produce apothecia on branches within 3 years of infection. Monthly covering and exposing branches showed that infection took place mainly between June and July.     

Dynamics of physicochemical properties and occurrence of fungal fruit bodies during decomposition of coarse woody debris of Fagus crenata

The pattern of changes in the physicochemical properties of wood, and its relationship with fungal succession during decomposition of coarse woody debris (CWD) of beech (Fagus crenata Blume) were investigated. In total, 47 snags and 66 logs were assigned to a system of five decay classes, and were used for analysis of the decomposition process. The decomposition process consists of two phases characterized by their dominant organic chemical constituents. In the first phase (decay class 1–3), acid-unhydrolyzable residue (AUR) and holocellulose decreased simultaneously. In the second phase (decay class 3–5), holocellulose decayed selectively. Fruiting bodies of ten fungal taxa occurred frequently on decomposing logs and/or snags. These fungi were divided into early and late colonizers according to their occurrence during CWD decomposition. The relationship between fungal community composition and the physicochemical properties of CWD was analyzed by canonical correspondence analysis (CCA). According to the Monte Carlo permutation test, decay class, water content, and type of CWD (log or snag) significantly affected the fungal community structure. Our results suggested that white-rot basidiomycetes, especially Omphalotus guepiniformis, play a central role in the simultaneous decomposition of AUR and holocellulose in the first phase of decomposition. On the other hand, fungal taxa occurring in the second phase of decomposition may not be responsible for the decomposition of holocellulose. Three possible mechanisms of holocellulose decomposition and AUR accumulation in the second phase of decomposition are proposed and discussed. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Variation of endophytic cork oak‐associated fungal communities in relation to plant health and water stress

The main objective of this study was to obtain more comprehensive knowledge about the effect of water stress on endophytic fungal communities in asymptomatic and declining cork oak trees. Six asymptomatic and six declining cork oak trees were randomly selected in a natural cork oak forest located in Sardinia, Italy. In February 2003, the soil around three asymptomatic and three declining trees was covered with a circular plastic film to reduce rain water supply with the intention to induce water stress. The remaining six trees served as controls. Predawn xylematic water potential (PWP) was used as water status indicator and measured seasonally. Between July 2003 and June 2004, fungal endophytes were isolated every 2–4 months from twigs, branches and woody tissues. Significant differences in PWP between covered and control trees were detected mainly in autumn. Gas exchange was greatest in asymptomatic control plants. All tissues were colonized by endophytic fungi. Nineteen fungal species were isolated from 1620 plant fragments. Biscogniauxia mediterranea was the most frequently isolated fungus. Its isolation frequency was significantly higher in declining covered trees than in control trees (p < 0.05). Presence of this fungus in asymptomatic control trees was significantly higher in winter than in summer. Water stress seems to reduce species diversity of the endophytic mycobiota in cork oak and to promote proliferation of some potentially pathogenic endophytes.     

Ectomycorrhizal fungal communities of Dipterocarpus alatus seedlings introduced by soil inocula from a natural forest and a plantation

We attempted to introduce ectomycorrhizal (ECM) fungi onto seedlings of Dipterocarpus alatus (Dipterocarpaceae) by soil inocula collected from tree stands of D. alatus. Top soils collected from beneath the trees of D. alatus in a dry evergreen forest and a 15-year-old plantation were inoculated onto germinating seeds of D. alatus. After 7 months of seedling cultivation, ECM fungal communities in the seedlings were investigated based on the sequences of ITS rDNA. The ECM fungi detected were divided into 19 phylotypes by molecular analysis. Most of the phylotypes were identified as ECM fungal taxa, i.e., Clavulina, Laccaria, Lactarius, Tomentella, Pyronemataceae, and Tricholomataceae. Accordingly, we can confirm that soil inoculation is a simple method to induce ECM formation with diverse fungi in pot cultured seedlings, which would be useful for introducing diverse ECM fungi to dipterocarp plantations.