Survival of sea‐water‐adapted trout,Salmo trutta L. ranched in a Danish fjord

The effect of seawater adaptation on the survival of coastally released post‐smolt trout, Salmo trutta L., was investigated by release: (1) directly (with no adaptation); (2) after retention in net pens in the sea for 29–131 days (delayed release); (3) after feeding with a high‐salt diet (12–13.5% NaCl) for 4 weeks; and (4) after a combination of (2) and (3). In total, 17 640 trout (age = 1+, 1.5 and 2+ years; mean fork lengths = 18.2–25.6 cm) were released in 14 batches in the summer or autumn months of 1986–1989. All fish were of domesticated origin and Carlin tagged. Survival and instantaneous mortality rates (total and fishing mortality) were estimated from reported recaptures. Mortality rates were estimated for: (1) the post‐smolt period; (2) the period until the legal size of capture (40 cm) was attained; and (3) for larger sea‐trout. Release with a delay of 4 weeks gave an increased survival rate. A longer adaptation period did not increase survival. On average, survival was increased by 36%. Survival was not increased by high‐salt diets. Until attainment of the legal size for capture, survival was 9.6% higher on average, with extremes as low as 1.7% and as high as 38% in individual batches.     

Migration pathways,speed and mortality of Atlantic salmon (Salmo salar) smolts in a Scottish river and the near‐shore coastal marine environment

Long‐distance migration of Atlantic salmon (Salmo salar) is known to result in high levels of mortality. For a species experiencing global population decline, it is thus vital to better understand migration behaviour, both in the river and marine stages. Atlantic salmon smolts (n = 50) were tracked using acoustic telemetry in the River Deveron, Scotland, and adjacent coastal area. Higher rates of mortality were observed in the river (0.77% per km) than the early marine stage of migration (0.0% per km). Mortality likely resulted from predation. Higher swim speeds were recorded in the early marine stage compared with the river (marine = 7.37 ± 28.20 km/day; river = 5.03 ± 1.73 km/day [mean ± SD]), a potential predator avoidance behaviour. The majority of smolts leaving the river did so in darkness and on a flooding tide. Overall river and marine migration success were linked to nights of lower lunar brightness. Marine migration speed decreased with increasing environmental noise levels, a finding with implications for fisheries management. The migration pathway in the early marine environment did not follow obvious geographical features, such as the coastline. Thus, we suggest that early marine environment pathways are more influenced by complex water currents. These findings highlight factors that influence smolt migration survival and behaviour, areas on which future research should focus.     

Survival of migrating sea trout (Salmo trutta) and Atlantic salmon (Salmo salar) smolts negotiating weirs in small Danish rivers

Abstract – The survival of brown trout and Atlantic salmon smolts during passage over small weirs was estimated in two small Danish rivers during the spring of 1998. Parallel groups of smolts were released upstream and downstream of the weirs and recaptured in traps further downstream. The results showed a smolt loss varying from 18 to 71% for trout and 53% for salmon. Furthermore, the surviving smolts from the upstream groups were delayed for up to 9 days compared to downstream groups. The study demonstrated that an increased proportion of total river discharge allocated to fish passage increased the smolt survival. Losses may be because of fish penetrating grids erected at fish farm inlets, predation and delays, which may lead to desmoltification. The low survival may seriously threat both the long-term viability of wild populations of anadromous salmonids and the outcome of the intensive stocking programme in Denmark.     

Influence of environmental and biological factors on the overwinter growth rate of Atlantic salmon Salmo salar parr in a UK chalk stream

Smolt lengths are increasingly recognised as an important determinant of salmonid marine survival rates. Overwintering growth rates could thus strongly influence adult return rates. In Atlantic salmon Salmo salar, most overwintering studies focus on rivers in harsh climates with minimal growth, yet in more southerly rivers, overwintering growth rates can be relatively high. Here, the factors influencing annual overwinter growth rates were tested for juvenile S. salar in a temperate chalk stream in southern England over 13 years, where over 10,000 salmon parr were tagged annually in autumn and a proportion recaptured the following spring during smolt emigration. Winters of higher and more variable water temperatures, with longer periods of high flows, showed increased overwintering growth rates. Faster growth rates were recorded from sites further upstream and that had lower parr densities; smaller individuals also grew more than expected for their initial size. These results suggest that a range of factors influences overwintering salmonid growth rates and can be used to inform management decisions to maximise the quality of emigrating smolts.     

Swimming performance of wild and F1-hatchery-reared Atlantic salmon (Salmo salar) and brown trout (Salmo trutta) smolts

Abstract –  The swimming performance of wild and hatchery-reared smolts of two salmonid species was investigated. Wild Atlantic salmon smolts (WS) and brown trout smolts (WT) of equal size were caught in fish traps during migration. Hatchery-reared smolts of both species (HS and HT for salmon and trout respectively) were first generation offspring from wild broodstock. The swimming performance of individual smolts from the four groups (WS, HS, WT, HT) was tested three consecutive times using a swimming flume with water flowing at a start rate of 0.16 m·s⁻¹ and a constant acceleration rate of 0.167 cm·s⁻² (10 cm·s⁻¹·min⁻¹). Wild caught smolts of both species performed significantly better than those reared in hatchery conditions. The WS group were observed to maintain an average swimming speed ( U _burst) that was 30% faster than the HS group, whereas the wild trout smolts were superior to HT by approximately 25%. Repeated measures revealed species-specific exhaustion patterns. Brown trout smolts maintained consecutive U _burst indicating significant stamina compared with Atlantic salmon smolts that were found to be exhausted by the initial trial.     

Seasonal differences in smolt traits and post-smolt survival of wild Atlantic salmon, Salmo salar, migrating from a northern boreal river

Abstract  Seasonal differences in smolt traits and the post-smolt survival of wild Atlantic salmon, Salmo salar L., were investigated by smolt trapping and Carlin-tagging in the River Simojoki, northern Finland between 1991 and 2004. The annual trapping season was divided into two halves based on the median catch date. Smolt length was significantly higher during the first half of the season, while differences in smolt weight were typically small. Smolt age was always significantly higher during the first half of the season because older smolts tended to migrate earlier in the season. Many smolts migrating during the early season and almost all smolts migrating later had started their new growth, indicating that smolts grow in the spring before sea entry. The differences in recaptures between smolts tagged during the first and second halves were insignificant. Although variations in smolt traits and environmental conditions can produce inter-annual variation in post-smolt survival, their seasonal differences seem to be too small to have an effect.     

Predation of Atlantic salmon, Salmo salar L., smolts and parr by red-breasted mergansers, Mergus serrator L., on two Scottish rivers

Abstract Current models estimating the impact of red-breasted mergansers, Mergus serrator L., on salmon, Salmo salar L., fisheries in Scotland fail to take account of any annual variation in the proportion of the diet that is smolts. During the 1987–1990 smolt runs, the annual variation in the diet of mergansers was estimated from the stomach contents of birds shot on two Scottish rivers. The proportion of salmon in the diet was greatest early in the smolt run (76–91% by weight), and contained proportionately more smolts than later in the run, when coarse fish were more prominent. There was little annual variation in the proportion of the diet that was juvenile salmon. However, the proportion of these fish that were smolts, was twice as great in some years than in others and this appeared to be independent of estimated annual smolt production in the rivers.     

Retrospective analysis of Atlantic salmon (Salmo salar) marine growth and condition in the northwest Atlantic based on tag‐recovery data

The life history of North American Atlantic salmon (Salmo salar) is characterized by extensive round‐trip migrations between freshwater rearing habitats and marine feeding grounds off the coasts of Canada and Greenland. Growth is rapid during the marine migration, and growth rate and condition factor may be indicators of salmon health during this period. Growth data were evaluated from a tag‐recovery program conducted from 1969 to 1991 using hatchery‐reared Atlantic salmon smolts released in the Penobscot River, Maine, U.S.A. Information from recaptures of 3167 salmon that were at large in the marine environment for 1 month to 3 yr was analyzed. Length–weight measurements coupled with time‐at‐large data were used to estimate von Bertalanffy and allometric growth parameters specific to the marine phase. Variations in growth and condition factor in relation to smolt age, release date, and temperature conditions in the northwest Atlantic were also examined. The von Bertalanffy k parameter declined with ordinal release date, indicating faster growth rates during the first year of smolts released earlier in the spring. The 2‐yr‐old smolts had a larger k than 1‐yr‐old smolts, although 1‐yr‐old smolts grew to a larger asymptotic size. Sea surface temperature had variable effects on growth parameters and condition factor, with temperature at the beginning of the migration and in overwintering habitat during the first year at sea having the greatest influence on length–weight relationships. Determining the mechanisms that influence growth of individuals during the marine phase will help elucidate the factors responsible for historic growth trends, establishing a baseline for current research.     

Riverine and early marine survival of stocked salmon smolts, Salmo salar L., descending the Testebo River, Sweden

Abstract  A combination of radio and acoustic telemetry was used to monitor the out-migration of hatchery-reared Atlantic salmon, Salmo salar L., in the River Testebo, its estuary and coastal system. As with many other Baltic rivers, the hydropower regulated River Testebo once had a self-sustaining salmon population that is now extinct. Substantial losses of smolts in the river (48–69%) and inner part of the estuary (43–47%) were found, but after leaving the estuary, the success of post-smolts moving out of the Bay was sufficiently high (83–89%) to conclude that habitat within the bay is not a factor limiting initial marine survival. The results suggest that hatchery-based recovery of a wild salmon population in the river will not be successful unless other actions, such as habitat improvement, are included.     

Annual variability in survival of sea-ranched Baltic salmon, Salmo salar L: significance of smolt size and marine conditions

Abstract Carlin tagging data for 1980–1991 were used to examine the influence of smolt size and feeding conditions on the post-smolt survival of ranched River Neva salmon, ( Salmo salar L.), in the the Gulf of Finland, which is the native feeding area of the stock, and in the Bothnian Sea, where the stock has been introduced. Because of better feeding conditions, the survival rates were higher and less variable in the Gulf of Finland than in the Bothnian Sea. In the Bothnian Sea, the annual variability in survival decreased and the mean value increased with increasing smolt size from the smallest (14–16 cm) to the largest (28–30 cm) size classes. The survival was positively correlated with growth rates, food resources and sea-surface temperatures. This suggests that in the Bothnian Sea the annual variability in survival is mainly because variable marine conditions affect growth rates, and, thus, the vulnerability of the post-smolts to size-dependent predation. In the Gulf of Finland, the survival advantage of large initial size and rapid growth was counteracted by size-selective post-smolt mortality from fishing. The increase in the survival rate with increasing smolt size levelled off at 22 cm, and the correlations between survival, growth and the indices of feeding conditions were mostly insignificant. For large smolts, some negative correlations were recorded, suggesting that the relative significance of mortality from fishing may even exceed that of size-dependent natural mortality. The implications of the results for management are discussed.     

Within-stock variations of life-history traits in juvenile Atlantic salmon (Salmo salar)

Variations in space (geographical location) and time (year) of phenotypic traits linked to life-history (size, growth, condition and sexual maturation) were analysed within the population of Atlantic salmon (Salmo salar L.) 1 + parr of Little Codroy River (southwest Newfoundland). The hydrographic system was divided into 10 zones: 4 for the mainstem and 6 for the tributaries. Despite the small size of the river studied, a highly significant spatial heterogeneity was observed. Within the mainstem, size, growth and rate of maturation of males tended to decrease when progressing upstream. When compared with the tributaries as a whole, the mainstem had smaller salmon juveniles, both at the end of the first winter (mainstem: 67.6 mm; tributaries: 73.3 mm) and at 1 + age (mainstem: 80.6 mm; tributaries: 88.3 mm), and the proportion of maturing fish among 1 + males was lower (mainstem: 48.6%; tributaries: 74.2%). According to the feature considered, from 20% to 70% of the spatial effect was due only to differences between the mainstem and the tributaries as a whole. A strong year effect was also revealed. Life-history traits seemed to fluctuate over time independently from one tributary to another, whereas patterns in their yearly variations were basically consistent among zones in the mainstem. The potential role of genetic and environmental factors in explaining changes in space and time of biological characteristics of parr is discussed. Within a small system such as Little Codroy River, spatio-temporal life-history variations of Atlantic salmon juveniles were most likely driven by environment.     

Relationships between marine growth and marine survival of one sea winter Atlantic salmon, Salmo salar L., from the River Bush, Northern Ireland

An examination of marine growth/marine survival relationships in Atlantic salmon, Salmo salar L., was carried out, based on scale growth measurements in relation to two indices of marine survival in wild fish from the River Bush, Northern Ireland. The survival of cohorts to the Irish/Northern Irish coast (prefishery) and to fresh water was statistically unrelated to variation in growth from smolt migration to the end of the first winter at sea ( P  > 0.1; – P  > 0.7). Marine growth of 1+ smolts decreased significantly during the period of the study ( P  < 0.05), but growth of 2+ smolts did not change ( P  > 0.05). The variability in marine growth was much less than the variation in natural survival at sea, suggesting that factors instead of or in addition to, growth influence natural survival in the marine environment. Survival to fresh water was not related to survival to the coast ( P  > 0.4), although it was inversely correlated with exploitation rate ( P  < 0.01). These results are discussed in relation to the use of freshwater returns to assess marine survival and the potential for the variation in natural marine mortality to influence total life-cycle variation.     

An outbreak of acute disease and mortality in Atlantic salmon (Salmo salar) post‐smolts in Norway caused by Tenacibaculum dicentrarchi

An outbreak of disease characterized by skin ulcers, fin rot and mortality was observed a few days after the transfer of Atlantic salmon (Salmo salar) from a freshwater smolt production facility to a land‐based seawater post‐smolt site. Dead and moribund fish had severe skin and muscle ulcers, often 2–6 cm wide, particularly caudal to the pectoral fins. Microscopic examination of smears from ulcers and head kidney identified long, slender Gram‐negative rods. Histopathological analysis revealed abundance of long, slender Tenacibaculum‐like bacteria in ulcers and affected fins. Genetic characterization using multilocus sequence analysis (MLSA) of seven housekeeping genes, including atpA, dnaK, glyA, gyrB, infB, rlmN and tgt, revealed that the isolates obtained during the outbreak were all clustered with the Tenacibaculum dicentrarchi‐type strain (USC39/09^T) from Spain. Two bath challenge experiments with Atlantic salmon and an isolate of T. dicentrarchi from the outbreak were performed. No disease or mortality was observed in the first trial. In the second trial with a higher challenge dose of T. dicentrarchi and longer challenge time, we got 100% mortality within 48 hr. This is the first reported outbreak of disease caused by T. dicentrarchi in Norwegian farmed Atlantic salmon.     

Sea lice infestation rates on wild and escaped farmed Atlantic salmon (Salmo salar L.) entering the Magaguadavic River, New Brunswick

A monitoring program for the prevalence and intensity of sea lice infestations of wild and escaped farmed salmon has been underway on the Magaguadavic River since 1992. Fish are screened in a fish ladder trap located in freshwater a short distance above the head of tide. No trends with time were evident in observed sea lice burdens, and in all years the majority of salmon, both wild and escapees, had no or low levels of infestation with sea lice. In the spring of 2002, 23 landlocked salmon moving to sea from the Magaguadavic River were acoustically tagged. Two fish returned to the river after a brief period of residence in Passamaquoddy Bay, with significant dermal damage from sea lice. These fish were tracked to areas close to commercial salmon farms.     

Long-term changes in the smolt size and age of Atlantic salmon, Salmo salar L., in a northern Baltic river related to parr density, growth opportunity and postsmolt survival

Abstract –  The size of wild Atlantic salmon ( Salmo salar L.) smolts in 1972–2004 was studied in relation to parr density, smolt age, growth opportunity and postsmolt survival in the Simojoki River. There was a significant negative regression between the annual mean smolt size and the density of wild >1 year parr in the previous autumn, but not between the annual mean smolt size and age. The density of reared parr released into the river or the growth opportunity, based on the day length and air temperature during the previous summer, did not affect the size of wild smolts. The data on postsmolt survival based on recaptures of Carlin-tagged smolts showed a significant positive relationship ( P  < 0.01) between the survival of postsmolts and the annual size of wild smolts. It is hypothesised that the increased density of wild >1 year parr could have contributed to the decreased smolt size since the 1990s, and the reduced size of wild smolts could be included among the factors resulting in their declined postsmolt survival in the Baltic Sea.     

Stocking location and predation by marine fishes affect survival of hatchery‐reared Atlantic salmon smolts

Abstract Release strategies of hatchery‐reared Atlantic salmon, Salmo salar L., smolts were compared by studying survival and migration of smolts (n = 99) and their predators (Atlantic cod, Gadus morhua L., n = 8; and saithe, Pollachius virens (L.), n = 2) during the first 37 km of the marine migration using acoustic telemetry. Survivorship was higher in smolts released at the river mouth (30%) compared with smolts released in the river (12%). This was likely due to mortality or reduced migratory behaviour in fresh water. The marine mortality was 37% during the first 2 km after leaving the river (at least 25% mortality because of predation from marine fishes), and total marine mortality over 37 km was 68%. Detection‐depth data were useful for evaluating whether the tagged smolts were alive or predated; mortality during the first 2 km of outward migration would have been underestimated at 26% instead of 37% without the analysis of depth detection. Transmitters from consumed post‐smolts remained in predators for up to 47 days (average 29 days).     

Reducing sea lice (Lepeophtheirus salmonis) infestation of farmed Atlantic salmon (Salmo salar L.) through functional feeds

Health diets for Atlantic salmon have become an important component of the integrated pest management strategies targeting sea lice. A challenge trial was performed to examine the effect of supplementing salmon diets with either immunostimulants or essential oils. One control and four experimental diets containing immunostimulants or natural identical extracts were fed to Atlantic salmon in triplicate tanks for 4 weeks before challenging the fish with the sea lice copepodids. Prevalence of infection was 100%, and the mean abundance of infection was 21.2. The lowest mean lice count of 17 per fish (P < 0.05) was found in the group fed a mix of natural identical plant extracts (PX I). This represents a 20% reduction in infection, showing the potential for health diets to be employed as a tool to help control sea lice. To gain an understanding of the mechanisms of action underlying this protection, fish fed the control diet and fish fed the PX I diet were compared using quantitative histology of the epidermis and proteomic analysis of epidermal mucus. No significant differences were seen in the thickness of the epidermis or mucous cell percentage area, but differences in expression were seen for a number of proteins, including heat shock proteins, in epidermal mucus.     

Comparison of freshwater and marine performances of all‐female diploid and triploid Atlantic salmon (Salmo salar L.)

The performance of all‐female diploid (AF2N) and triploid (AF3N) Atlantic salmon were compared in fresh water, under commercial production conditions in 1995 and 1996 year classes. The performance of the 1996 year class was also assessed for 14 months in a commercial sea farm. Freshwater mortality was higher in the triploid groups. The majority of losses occurred in the early stages of egg development and during the first feeding period, when the incidence of non‐feeding fry was consistently higher. In growth studies, although diploid fry were significantly heavier during first feeding there were no significant differences in weight between groups some 8 months after fertilization or in presmolt growth periods from February to April in 1996 and 1997. Smolting rates were high (range 93.5–95.3%) and the incidence of deformities was low (< 1%) in both groups. Marine survival was lower in the triploid group, largely as a consequence of higher losses sustained during a period of chronic stress, when triploid losses were 9% higher. Growth patterns were similar for the first 11 months in sea water. Although graded triploid salmon were heavier in January 1998 (AF3N 1.62 ± 0.033 kg, AF2N 1.46 ± 0.36 kg, P < 0.05), when the fish were harvested in May 1998 diploid salmon were significantly heavier than triploid salmon although there was no significant difference in weights after evisceration (AF3N 2.40 kg ± 0.04 AF2N 2.49 kg ±0.03). The increase in weight of the diploids between winter and harvest reflects the growth spurt that occurs in maturing fish in the spring. Overall yields of triploid salmon in salt water were lower as a result of inferior survival.     

Piscine reovirus (PRV) in wild Atlantic salmon,Salmo salar L., and sea‐trout,Salmo trutta L., in Norway

This is the first comprehensive study on the occurrence and distribution of piscine reovirus (PRV) in Atlantic salmon, Salmo salar L., caught in Norwegian rivers. PRV is a newly discovered reovirus associated with heart and skeletal muscle inflammation (HSMI), a serious and commercially important disease affecting farmed Atlantic salmon in Norway. A cross‐sectional survey based on real‐time RT‐PCR screening of head kidney samples from wild, cultivated and escaped farmed Atlantic salmon caught from 2007 to 2009 in Norwegian rivers has been conducted. In addition, anadromous trout (sea‐trout), Salmo trutta L., caught from 2007 to 2010, and anadromous Arctic char, Salvelinus alpinus (L.), caught from 2007 to 2009, were tested. PRV was detected in Atlantic salmon from all counties included in the study and in 31 of 36 examined rivers. PRV was also detected in sea‐trout but not in anadromous Arctic char. In this study, the mean proportion of PRV positives was 13.4% in wild Atlantic salmon, 24.0% in salmon released for stock enhancement purposes and 55.2% in escaped farmed salmon. Histopathological examination of hearts from 21 PRV‐positive wild and one cultivated salmon (Ct values ranging from 17.0 to 39.8) revealed no HSMI‐related lesions. Thus, it seems that PRV is widespread in Atlantic salmon returning to Norwegian rivers, and that the virus can be present in high titres without causing lesions traditionally associated with HSMI.