Decomposition and distribution of N labelled mustard litter (Sinapis alba) in physical soil fractions of a cropland with high- and low-yield field areas

High-yield (HY) areas of an agricultural cropland were characterized by different positions on a slope and lower silt and clay contents, compared to low-yield (LY) areas, and this was associated with differences in water regime and C and N turnover. To understand differences in N flows of HY and LY areas, a combination of ¹⁵N tracer techniques and physical fractionation procedures was applied. Within 570 d after application of ¹⁵N labelled mustard litter to an agricultural cropland, the distribution of ¹⁵N was measured in particulate organic matter (POM) fractions and in fine mineral fractions (fine silt- and clay-sized fractions). After 570 d, only 2.5% of the initial ¹⁵N amount was found in POM fractions, with higher amounts in POM occluded in aggregates than in free POM. After this period, stabilization of the initial ¹⁵N in fine silt- and clay-sized fractions amounts to 10% in HY, but 20% in LY soils. 70% to 85% of the added ¹⁵N were lost. Initial decomposition of labelled material was faster in HY than in LY areas during the first year, but the remaining ¹⁵N amounts in POM fractions of the different areas were similar after 570 d. ¹⁵N amounts and concentrations in mineral-associated fractions increased within 160 d after application. From 160 to 570 d, HY and LY areas showed different ¹⁵N dynamics, resulting in a decline of ¹⁵N amounts in HY, but constant ¹⁵N amounts in LY soils. The results indicate faster decomposition processes in HY than in LY areas, due to different soil conditions, such as soil texture and water regime. The higher silt and clay contents of LY areas seem to promote N stabilization in fine mineral fractions. As a whole, N flows were higher in HY compared to LY areas, thus supporting higher yields and accelerated organic matter degradation due to higher N supply.     

Rhizosphere activity, grass species and N availability effects on the soil C and N cycles

We examined whether grass species and soil nitrogen (N) availability could enhance Carbon (C) and N turnover during root litter decay in grassland. Three species with increasing competitiveness (Festuca ovina, Dactylis glomerata and Lolium perenne) were grown at two N fertiliser levels in an undisturbed grassland soil, in which soil organic fractions derived for the last 9 years from Lolium root litter which was ¹³C-depleted. During the subsequent experimental year, the C turnover was calculated using the respective δ¹³C values of the old and new C in the root phytomass, in two Particulate Organic Matter (POM) fractions above 200 μm and in the lightest part of the aggregated soil fraction between 50 and 200 μm. Soil N availability was monitored during the regrowth periods with ion exchange resins (IER). The C decay rates of each particle size fraction were calculated with a simple mechanistic model of C dynamics. The N mineralisation immobilisation turnover (MIT) was characterised by dilution of ¹⁵N-labelled fertiliser in the N harvestThe C:N ratio and the residence time of C in the fractions decreased with particle size. The presence of a grass rhizosphere increased the decay rate of old C. Accumulation of new C in particle size fractions increased with species competitiveness and with N supply. Species competitiveness increased C turnover in the aggregated fraction, as a result of greater accumulation of new C and faster decay of old C. Fertiliser N increased N turnover and C mineralisation in the SOM. Species competitiveness decreased soil -N exchanged with the IER and increased dissolved organic C (DOC) content. The nature of the current rhizosphere is thus an important factor driving C and N transformations of the old root litter, in relation with grass species strategy. Plant competitiveness may stimulate the C and N turnover in the more evolved SOM fractions in a similar way to the mineral N supply.     

Leaf litter C and N cycling from a deciduous permanent crop

Our understanding of leaf litter carbon (C) and nitrogen (N) cycling and its effects on N management of deciduous permanent crops is limited. In a 30-day laboratory incubation, we compared soil respiration and changes in mineral N [ammonium (NH₄⁺-N) + nitrate (NO₃^–-N)], microbial biomass nitrogen (MBN), total organic carbon (TOC) and total non-extractable organic nitrogen (TON) between a control soil at ¹⁵N natural abundance (δ¹⁵N = 1.08‰) without leaf litter and a treatment with the same soil, but with almond (Prunus dulcis (Mill.) D.A. Webb) leaf litter that was also enriched in ¹⁵N (δ¹⁵N = 213‰). Furthermore, a two-end member isotope mixing model was used to identify the source of N in mineral N, MBN and TON pools as either soil or leaf litter. Over 30 d, control and treatment TOC pools decreased while the TON pool increased for the treatment and decreased for the control. Greater soil respiration and significantly lower (p < 0.05) mineral N from 3 to 15 d and significantly greater MBN from 10 to 30 d were observed for the treatment compared to the control. After 30 d, soil-sourced mineral N was significantly greater for the treatment compared to the control. Combined mineral N and MBN pools derived from leaf litter followed a positive linear trend (R² = 0.75) at a rate of 1.39 μg N g^?1 soil day^?1. These results suggest early-stage decomposition of leaf litter leads to N immobilization followed by greater N mineralization during later stages of decomposition. Direct observations of leaf litter C and N cycling assists with quantifying soil N retention and availability in orchard N budgets.     

Mineralization of soil organic nitrogen solubilized by aqua ammonia fertilizer

Organic N solubilized by NH_3(aq) was extracted from ¹⁵N-labelled or unlabelled soil, concentrated and added to non-extracted soil, which was incubated under aerobic conditions at 27±1°C. Gross N mineralization, gross N immobilization, and nitrification in soils with or without addition of unlabelled soluble organic N were estimated by models based on the dilution of the NH ₄ ⁺ or NO _inf3 ^sup- pools, which were labelled with ¹⁵N at the beginning of incubation. Mineralization of labelled organic N was measured by the appearance of label in the mineral N pool. Although gross N mineralization and gross N immobilization were increased in two soils between day 0 and day 7 following addition of unlabelled organic N solubilized by NH_3(aq), there was no increase in net N mineralization. Solubilization of ¹⁵N-labelled organic N increased and the ¹⁵N enrichment of the soluble organic N decereased as the concentration of NH_3(aq) added increased. A constant proportion of approximately one-quarter of the labelled organic N added at different rates to non-extracted soil was recovered in the mineral N pool after an incubation period of 14 days, and the availability ratios calculated from net N mineralization data were 1.1:1 and 2.1:1 for 111 and 186 mg added organic-N kg^-1 soil, respectively, indicating that the mineralization of organic N was increased by solubilization.     

Organic matter in density fractions of water-stable aggregates in silty soils: Effect of land use

The location of soil organic matter (SOM) within the soil matrix is considered a major factor determining its turnover, but quantitative information about the effects of land cover and land use on the distribution of SOM at the soil aggregate level is rare. We analyzed the effect of land cover/land use (spruce forest, grassland, wheat and maize) on the distribution of free particulate organic matter (POM) with a density <1.6 g cm⁻³ (free POM_<1.6), occluded particulate organic matter with densities <1.6 g cm⁻³ (occluded POM_<1.6) and 1.6-2.0 g cm⁻³ (occluded POM_1.6-2.0) and mineral-associated SOM (>2.0 g cm⁻³) in size classes of slaking-resistant aggregates (53-250, 250-1000, 1000-2000, >2000 μm) and in the sieve fraction <53 μm from silty soils by applying a combined aggregate size and density fractionation procedure. We also determined the turnover time of soil organic carbon (SOC) fractions at the aggregate level in the soil of the maize site using the ¹³C/¹²C isotope ratio. SOM contents were higher in the grassland soil aggregates than in those of the arable soils mainly because of greater contents of mineral-associated SOM. The contribution of occluded POM to total SOC in the A horizon aggregates was greater in the spruce soil (23-44%) than in the grassland (11%) and arable soils (19%). The mass and carbon content of both the free and occluded POM fractions were greater in the forest soil than in the grassland and arable soils. In all soils, the C/N ratios of soil fractions within each aggregate size class decreased in the following order: free POM_<1.6>occluded POM_<1.6-2.0>mineral-associated SOM. The mean age of SOC associated with the <53 μm mineral fraction of water-stable aggregates in the Ap horizon of the maize site varied between 63 and 69 yr in aggregates >250 μm, 76 yr in the 53-250 μm aggregate class, and 102 yr in the sieve fraction <53 μm. The mean age of SOC in the occluded POM increased with decreasing aggregate size from 20 to 30 yr in aggregates >1000 μm to 66 yr in aggregates <53 μm. Free POM had the most rapid rates of C-turnover, with residence times ranging from 10 yr in the fraction >2000 μm to 42 yr in the fraction 53-250 μm. Results indicated that SOM in slaking-resistant aggregates was not a homogeneous pool, but consisted of size/density fractions exhibiting different composition and stability. The properties of these fractions were influenced by the aggregate size. Land cover/land use were important factors controlling the amount and composition of SOM fractions at the aggregate level.     

Bacterial community structure in soil microaggregates and on particulate organic matter fractions located outside or inside soil macroaggregates

Soil aggregates and particulate organic matter (POM) are thought to represent distinct soil microhabitats for microbial communities. This study investigated whether organo-mineral (0–20, 20–50 and 50–200 μm) and POM (two sizes: >200 and <200 μm) soil fractions represent distinct microbial habitats. Microbial habitats were characterised by the amount and quality of organic matter, the genetic structure of the bacterial community, and their location outside or inside macroaggregates (>200 μm). The denaturing gradient gel electrophoresis (DGGE) profiles revealed that bacterial communities structure of organo-mineral soil fractions were significantly different in comparison to the unfractionated soil. Conversely, there were little differences in C concentrations, C:N ratios and no differences in DGGE profiles between organo-mineral fractions. Bacterial communities between soil fractions located inside or outside macroaggregates were not significantly different. However, the bacterial communities on POM fractions were significantly different in comparison to organo-mineral soil fractions and unfractionated soil, and also between the 2 sizes of POM. Thus in the studied soil, only POM fractions represented distinct microhabitats for bacterial community, which likely vary with the state of decomposition of the POM.     

Cold storage and laboratory incubation of intact soil cores do not reflect in-situ nitrogen cycling rates of tropical forest soils

Measurements of N transformation rates in tropical forest soils are commonly conducted in the laboratory from disturbed or intact soil cores. On four sites with Andisol soils under old-growth forests of Panama and Ecuador, we compared N transformation rates measured from laboratory incubation (at soil temperatures of the sites) of intact soil cores after a period of cold storage (at 5 °C) with measurements conducted in situ. Laboratory measurements from stored soil cores showed lower gross N mineralization and NH₄⁺ consumption rates and higher gross nitrification and NO₃⁻ immobilization rates than the in-situ measurements. We conclude that cold storage and laboratory incubation change the soils to such an extent that N cycling rates do not reflect field conditions. The only reliable way to measure N transformation rates of tropical forest soils is in-situ incubation and mineral N extraction in the field.     

In situ mineral <Superscript>15</Superscript>N dynamics and fate of added <Superscript>15</Superscript>NH<Subscript>4</Subscript><Superscript>+</Superscript> in hoop pine plantation and adjacent native forest in subtropical Australia

Background, aim, and scope  Hoop pine (Araucaria cunninghamii) is a nitrogen (N) demanding indigenous Australia softwood species with plantations in Southeast Queensland, Australia. Soil fertility has declined with increasing rotations and comparison study of N cycling between hoop pine plantations, and adjacent native forest (NF) is required to develop effective forest management for enhancing sustainable forest production and promoting environmental benefits. Field in situ mineral ¹⁵N transformations in these two forest ecosystems have not been studied. Hence, the present study was to compare the differences in soil nutrients, N transformations, ¹⁵N fluxes, and fate between the hoop pine plantation and the adjacent native forest. Materials and methods  The study sites were in Yarraman State Forest (26°52′ S, 151°51′ E), Southeastern Queensland, Australia. The in situ core incubation method was used in the field experiments. Mineral N was determined using a LACHAT Quickchem Automated Ion Analyzer. ¹⁵N were performed using an isotope ratio mass spectrometer with a Eurovector elemental analyzer. All statistical tests were carried out by the SPSS 11.0 for Windows statistical software package. Results  Soil total C and N were significantly higher in the NF than in the 53-year-old hoop pine plantation. Concentrations of NO₃ ^– were significantly higher in the NF soil than in the plantation soil. The plantation soil had significantly higher ¹⁵N and ¹³C natural abundances than the NF soil. The NF soil had significantly lower C/N ratios than the plantation soil. NO₃ ^––N was dominated in mineral N pools in both NF and plantation soils, accounting for 91.6% and 70.3% of the total mineral N pools, respectively. Rates of net nitrification and net N mineralization were, respectively, four and three times higher in the NF soil than in the plantation soil. The ¹⁵NO₃ ^––N and mineral ¹⁵N were significantly higher in the NF soil than in the plantation soil. Significant difference in ¹⁵NH₄ ⁺–N was found in the NF soil before and after the incubation. Discussion  The NF soil had significantly higher NO₃ ^––N, mineral N, total N and C but lower δ¹⁵N, δ¹³C, and C/N ratios than the plantation soil. Moreover, the rates of soil net N mineralization and nitrification were significantly higher, but ammonification rate was lower in the NF than in the plantation. The NF soil had many more dynamic N transformations than the plantation soil due to the combination of multiple species and layers and, thus, stimulation of microbial activity and alteration of C and N pool sizes in favor of the N transformations by soil microbes. The net rate of N and ¹⁵N transformation demonstrated differences in N dynamic related to the variation in tree species between the two ecosystems. Conclusions  The change of land use and trees species had significant impacts on soil nutrients and N cycling processes. The plantation had larger losses of N than the NF. The NO₃ ^––N and ¹⁵NO₃ ^––N dominated in the mineral N and ¹⁵N pools in both forest ecosystems. Recommendations and perspectives  Native forest soil had strong N dynamic compared with the plantation soil. Composition of multiple tree species with different ecological niches in the plantation could promote the soil ecosystem sustainability. The ¹⁵N isotope dilution technique in the field can be quite useful for studying in situ mineral ¹⁵N transformations and fate to further understand actual N dynamics in natural forest soils.     

Priming effect of biuret addition on native soil N mineralisation under laboratory conditions

This study was carried out to quantify the priming effect of biuret on native soil nitrogen (N) mineralisation during a 112-day incubation. Addition of biuret (100 mg ¹⁵N-labelled biuret kg⁻¹ soil) increased the turnover rate constant of soil organic matter and had a positive priming effect on native soil N mineralisation in two soils. The additional mineralisation was 0.65% of the total soil N (equivalent to 47.1 kg N ha⁻¹) in a sandy loam soil and 0.62% of the soil N (equivalent to 46.5 kg N ha⁻¹) in a silt loam soil.     

Natural N abundance of plants and soils under different management practices in a montane grassland

The natural ¹⁵N abundance (δ¹⁵N) of different ecosystem compartments is considered to be an integrator of nitrogen (N) cycle processes. Here we investigate the extent to which patterns of δ¹⁵N in grassland plants and soils reflect the effect of different management practices on N cycling processes and N balance. Investigations were conducted in long-term experimental plots of permanent montane meadows with treatments differing in the amount and type of applied fertilizer (0-200 kg N ha⁻¹ yr⁻¹; mineral fertilizer, cattle slurry, stable manure) and/or the cutting frequency (1-6 cuts per season). The higher δ¹⁵N values of organic fertilizers compared to mineral fertilizer were reflected by higher δ¹⁵N values in soils and harvested plant material. Furthermore, δ¹⁵N of top soils and plant material increased with the amount of applied fertilizer N. N balances were calculated from N input (fertilization, atmospheric N deposition and symbiotic N₂ fixation) and N output in harvest. ‘Excess N’—the fraction of N input not harvested—was assumed to be lost to the environment or accumulated in soil. Taking fertilizer type into account, strong positive correlations between δ¹⁵N of top soils and the N input-output balance were found. In plots receiving mineral N fertilizer this indicates that soil processes which discriminate against ¹⁵N (e.g. nitrification, denitrification, ammonia volatilization) were stimulated by the increased supply of readily available N, leading to loss of the ¹⁵N depleted compounds and subsequent ¹⁵N enrichment of the soils. By contrast, in plots with organic fertilization this correlation was partly due to accumulation of ¹⁵N-enriched fertilizer N in top soils and partly due to the occurrence of significant N losses. Cutting frequency appeared to have no direct effect on δ¹⁵N patterns. This study for the first time shows that the natural abundance of ¹⁵N of agricultural systems does not only reflect the type (organic or mineral fertilizer) or amount of annual fertilizer amendment (0-200 kg ha⁻¹ yr⁻¹) but that plant and soil δ¹⁵N is better described by N input-output balances.     

Shoot,root, soil and microbial nitrogen dynamics in two contrasting soils cropped to barley (Hordeum vulgare L.)

Summary Dynamics of barley N, mineral N, and organic N were compared at Ellerslie (Black Chernozem, Typic Cryoboroll) and Breton (Gray Luvisol, Typic Cryoboralf) in central Alberta, using ¹⁵N-urea. On average, shoot N and shoot ¹⁵N recoveries at Ellerslie (14.1 g m^–2, 36%) were greater than at Breton (4.5 g m^–2, 17%). Root N (g m^–2) did not significantly differ between sites (0–30 cm) but root ¹⁵N recovery was greater at Breton (3.4%) than Ellerslie (1.8%). Low levels of shoot N and shoot ¹⁵N at Breton were partly due to very wet soil conditions in July, which resulted in premature shoot senescence and low plant N uptake. Although the total ¹⁵N recoveries from the system (to 30 cm depth) at Ellerslie (63%) and Breton (56%) were similar, soil ¹⁵N was greater at Breton (35%) than at Ellerslie (26%). There were no differences in mineral N between sites but the average ¹⁵N recovery in the mineral-N pool was significantly greater at Ellerslie (3.3%) than at Breton (1.6%). There was no difference in ¹⁵N recovery in the microbial biomass (3%) between sites, although non-microbial organic ¹⁵N was greater at Breton (31 %) than at Ellerslie (20%). The two soils showed differences in the relative size of kinetically active N pools and in relative mineralization rates. Microbial N (0–30 cm) was greater at Ellerslie (13.3 g m^–2) than at Breton (9.9 g m^–2), but total microbial N made up a larger proportion of total soil N at Breton (1.6%) than at Ellerslie (0.9%). In the 0–10 cm interval, microbial N was 1.7-fold greater and non-microbial active N was 3-fold greater at Breton compared to Ellerslie, when expressed as a proportion of total soil N. Net N mineralization in a 10-day laboratory incubation was 1.4-fold greater in the Black Chernozem (0–10 cm interval) from Ellerslie, compared to the Gray Luvisol from Breton, when expressed per gram of soil. Net N mineralization in the soil from Breton was double that of the soil from Ellerslie, when expressed as a proportion of soil N. Although soil N (g m^–2) was 2.5-fold greater at Ellerslie compared to Breton, it was cycled more rapidly at Breton.     

Effect of extracellular-enzyme activities on solubilization rate of soil organic nitrogen

In a sandy soil containing ¹⁵N-labeled active (soluble and easily degradable) and non-labelled passive (recalcitrant) fractions of soil organic matter, the rate of net N mineralization (solubilization) was determined during a 55-day incubation at 25°C, 63% water-holding capacity and different levels of soil extracellular-enzyme activities. The active fraction of soil N was labelled by preincubation (at 5°C and 74% water-holding capacity for 6 months) of soil amended with ¹⁵N-labeled plant material. Increases in the activity of extracellular-enzymes in soil were induced by the addition of glucose and KH₂PO₄ at the beginning of the incubation. The results show that the contents of total soluble N (NO ₃ ^– –N+NH ₄ ⁺ –N + soluble organic N) were significantly higher in glucose-amended soil compared to the unamended soil. The increases in soluble N in soil amended with 1 and 2 mg glucose g^-1 dry soil corresponded to a mean rate of net solubilization of 7.9±1.4 and 18.8±0.7 nmol N g^-1 dry soil day^-1, respectively. The mean rate of net N solubilization (3.6±1.0 nmol N g^-1 dry soil day^-1) in unamended soil was significantly lower than those of glucose amended soils. The content of ¹⁵N in total soluble N in soil amended with 2 mg glucose, for example, was diluted from 3.11±0.08 atom% before the incubation to 2.77±0.03 atom% after 55 days. This indicates that 89% of soluble-N accumulated in soil by the end of the incubation originated from the active fraction of soil N and the rest, estimated at 11%, originated from the passive fraction. The activities of soluble and total proteases as well as the rate of N solubilization in the soil increased with the application of glucose. The activity of these extracellular enzymes was highly correlated with the rates of net N solubilization. Thus, increases in extracellular-enzyme activities in glucose-amended soils had a priming effect on the solubilization of ¹⁵N-labeled active and non-labeled passive fractions of soil organic N. It seems that the activity of extracellular-enzymes expressed in terms of total and soluble protease activities could be a rate-limiting factor in the processes of soil organic N solubilization.     

Soil particulate organic matter effects on nitrogen availability after afforestation with Eucalyptus globulus

We examined the hypothesis that changes in the quality and/or quantity of soil particulate organic matter (POM) after afforestation of pasture land with Eucalyptus globulus Labill. plantations caused increased nitrogen (N) immobilization and a decline in N availability. The quantity of POM was measured on soils from 10 paired pasture/plantation sites in south-western Australia. Net mineralization of C and N were measured over a 14-day incubation of POM, whole soil, and a mix of POM (33%) and whole soil (67%) at 25 °C and optimal moisture content (matric potential of 25 kPa). There was no significant difference in total organic C between pasture and plantation. However, the POM fraction C was higher in plantation soils (75%) than under pasture (62%), reflecting the coarser nature of organic inputs under plantation. Total soil N concentration was 20% lower under plantation compared to pasture, and the proportion in the POM was higher (74% compared to 57% for pasture soil). The C:N ratios in POM under both pasture and plantation, and in the whole soil under plantation were around 19, but C:N ratios of whole soil under pasture was 17. Average C mineralization was 13% lower in plantation relative to that in pasture soil. The isolated POM fraction had 18% higher C mineralization rate than that in whole soil. The change in net N mineralization with afforestation was marked, with 50% lower net N mineralization in plantation than pasture whole soils. Net N mineralization in the isolated POM fraction was also about 50% of that in the whole soil for both pasture and plantation soils. Although, the pasture and plantation POM had similar C:N ratios, the net N mineralization was 2-fold greater in pasture POM than in plantation POM, suggesting that biochemical characteristics other than the C:N ratio had the main influence on net N mineralization rates. The POM fraction did not significantly immobilize N from the whole soil when placed in a mixture of POM and whole soil, suggesting that N immobilization was not the main mechanism for POM to influence N availability in these soils.     

Rhizodeposition-induced decomposition increases N availability to wild and cultivated wheat genotypes under elevated CO2

Elevated CO₂ may increase nutrient availability in the rhizosphere by stimulating N release from recalcitrant soil organic matter (SOM) pools through enhanced rhizodeposition. We aimed to elucidate how CO₂-induced increases in rhizodeposition affect N release from recalcitrant SOM, and how wild versus cultivated genotypes of wheat mediated differential responses in soil N cycling under elevated CO₂. To quantify root-derived soil carbon (C) input and release of N from stable SOM pools, plants were grown for 1 month in microcosms, exposed to ¹³C labeling at ambient (392 μmol mol⁻¹) and elevated (792 μmol mol⁻¹) CO₂ concentrations, in soil containing ¹⁵N predominantly incorporated into recalcitrant SOM pools. Decomposition of stable soil C increased by 43%, root-derived soil C increased by 59%, and microbial-¹³C was enhanced by 50% under elevated compared to ambient CO₂. Concurrently, plant ¹⁵N uptake increased (+7%) under elevated CO₂ while ¹⁵N contents in the microbial biomass and mineral N pool decreased. Wild genotypes allocated more C to their roots, while cultivated genotypes allocated more C to their shoots under ambient and elevated CO₂. This led to increased stable C decomposition, but not to increased N acquisition for the wild genotypes. Data suggest that increased rhizodeposition under elevated CO₂ can stimulate mineralization of N from recalcitrant SOM pools and that contrasting C allocation patterns cannot fully explain plant mediated differential responses in soil N cycling to elevated CO₂.     

Gross N transfer rates in field soils measured by 15N-pool dilution

Abstract

A micro-plot ¹⁵N-tracer experiment was established in three different soils of a long-term soil fertility field experiment. The nutrient-poor loam sand has been subjected to various treatments over the years and this has resulted in different organic C (0.35% – 0.86%), microbial biomass (38.3 – 100.0 µg C _mic g^?1 soil), clay and fine silt contents. Using the ¹⁵N-pool dilution technique, we assessed gross N-transfer rates in the field. Gross N mineralization rates varied strongly among the three plots and ranged between 0.4 and 4.2 µg N g^?1 soil d^?1. Gross nitrification rates were estimated to be between 0 and 2.1 µg N g^?1 soil d^?1. No correlation between gross N mineralization rates and the organic matter content of the soils was established. However, gross nitrate consumption rates increased with increasing soil C content. The ¹⁵N-pool dilution technique was successfully used to measure gross N transfer rates directly in the field.     

Impacts of different N management regimes on nitrifier and denitrifier communities and N cycling in soil microenvironments

Real-time quantitative PCR assays, targeting part of the ammonia monooxygenase (amoA), nitrous oxide reductase (nosZ), and 16S rRNA genes were coupled with ¹⁵N pool dilution techniques to investigate the effects of long-term agricultural management practices on potential gross N mineralization and nitrification rates, as well as ammonia-oxidizing bacteria (AOB), denitrifier, and total bacterial community sizes within different soil microenvironments. Three soil microenvironments [coarse particulate organic matter (cPOM; >250 μm), microaggregate (53-250 μm), and silt-and-clay fraction (<53 μm)] were physically isolated from soil samples collected across the cropping season from conventional, low-input, and organic maize-tomato systems (Zea mays L.-Lycopersicum esculentum L.). We hypothesized that (i) the higher N inputs and soil N content of the organic system foster larger AOB and denitrifier communities than in the conventional and low-input systems, (ii) differences in potential gross N mineralization and nitrification rates across the systems correspond with AOB and denitrifier abundances, and (iii) amoA, nosZ, and 16S rRNA gene abundances are higher in the microaggregates than in the cPOM and silt-and-clay microenvironments. Despite 13 years of different soil management and greater soil C and N content in the organic compared to the conventional and low-input systems, total bacterial communities within the whole soil were similar in size across the three systems (∼5.15 × 10⁸ copies g⁻¹ soil). However, amoA gene densities were ∼2 times higher in the organic (1.75 × 10⁸ copies g⁻¹ soil) than the other systems at the start of the season and nosZ gene abundances were ∼2 times greater in the conventional (7.65 × 10⁷ copies g⁻¹ soil) than in the other systems by the end of the season. Because organic management did not consistently lead to larger AOB and denitrifier communities than the other two systems, our first hypothesis was not corroborated. Our second hypothesis was also not corroborated because canonical correspondence analyses revealed that AOB and denitrifier abundances were decoupled from potential gross N mineralization and nitrification rates and from inorganic N concentrations. Our third hypothesis was supported by the overall larger nitrifier, denitrifier, and total bacterial communities measured in the soil microaggregates compared to the cPOM and silt-and-clay. These results suggest that the microaggregates are microenvironments that preferentially stabilize C, and concomitantly promote the growth of nitrifier and denitrifier communities, thereby serving as potential hotspots for N₂O losses.     

Organic C and N stabilization in a forest soil: Evidence from sequential density fractionation

In mineral soil, organic matter (OM) accumulates mainly on and around surfaces of silt- and clay-size particles. When fractionated according to particle density, C and N concentration (per g fraction) and C/N of these soil organo-mineral particles decrease with increasing particle density across soils of widely divergent texture, mineralogy, location, and management. The variation in particle density is explained potentially by two factors: (1) a decrease in the mass ratio of organic to mineral phase of these particles, and (2) variations in density of the mineral phase. The first explanation implies that the thickness of the organic accumulations decreases with increasing particle density. The decrease in C/N can be explained at least partially by especially stable sorption of nitrogenous N-containing compounds (amine, amide, and pyrrole) directly to mineral surfaces, a phenomenon well documented both empirically and theoretically. These peptidic compounds, along with ligand-exchanged carboxylic compounds, could then form a stable inner organic layer onto which other organics could sorb more readily than onto the unconditioned mineral surfaces (“onion” layering model).To explore mechanisms underlying this trend in C concentration and C/N with particle density, we sequentially density fractionated an Oregon andic soil at 1.65, 1.85, 2.00, 2.28, and 2.55 g cm⁻³ and analyzed the six fractions for measures of organic matter and mineral phase properties.All measures of OM composition showed either: (1) a monotonic change with density, or (2) a monotonic change across the lightest fractions, then little change over the heaviest fractions. Total C, N, and lignin phenol concentration all decreased monotonically with increasing density, and ¹⁴C mean residence time (MRT) increased with particle density from ca. 150 years to >980 years in the four organo-mineral fractions. In contrast, C/N, ¹³C and ¹⁵N concentration all showed the second pattern. All these data are consistent with a general pattern of an increase in extent of microbial processing with increasing organo-mineral particle density, and also with an “onion” layering model.X-ray diffraction before and after separation of magnetic materials showed that the sequential density fractionation (SDF) isolated pools of differing mineralogy, with layer-silicate clays dominating in two of the intermediate fractions and primary minerals in the heaviest two fractions. There was no indication that these differences in mineralogy controlled the differences in density of the organo-mineral particles in this soil. Thus, our data are consistent with the hypothesis that variation in particle density reflects variation in thickness of the organic accumulations and with an “onion” layering model for organic matter accumulation on mineral surfaces. However, the mineralogy differences among fractions made it difficult to test either the layer-thickness or “onion” layering models with this soil. Although SDF isolated pools of distinct mineralogy and organic-matter composition, more work will be needed to understand mechanisms relating the two factors.     

Organic matter fractions and N mineralization in vegetable‐cropped sandy soils

Soil organic nitrogen mineralization rates and possible predictors thereof were investigated for vegetable‐growing soils in Belgium. Soil organic matter (SOM) was fractionated into sand (> 53 μm) and silt+clay (< 53 μm) fractions. The latter fraction was further separated into 6%NaOCl‐oxidation labile (6%NaOCl‐ox) and resistant N and C and subsequently into 10%HF‐extractable (mineral bound) and resistant (recalcitrant) N and C. The N mineralization turnover rate (% of soil N/year) correlated with several of the investigated N or C fractions and stepwise linear regression confirmed that the 6%NaOCl‐ox N was the best predictor. However, the small R² (0.42) of the regression model suggests that soil parameters other than the soil fractions isolated here would be required to explain the significant residual variation in N mineralization rate. A next step could be to look for alternative SOM fractionations capable of isolating bioavailable N. However, it would appear that the observed relationships between N fractions and N mineralization may not be causal but indirect. The number of vegetable crops per rotation did not influence N mineralization, but it did influence 6%NaOCl‐ox N, probably as an effect of differences in crop residues returned and organic manure supply. However, the nature of this relation between management, SOM quality and N mineralization is not clear. Explanation of correlations between N mineralization and presumed bioavailable N fractions, like the 6%NaOCl‐ox N, requires further mechanistic elucidation of the N mineralization process.     

Long-term organic phosphorus mineralization in Spodosols under forests and its relation to carbon and nitrogen mineralization

In forest soils where a large fraction of total phosphorus (P) is in organic forms, soil micro-organisms play a major role in the P cycle and plant availability since they mediate organic P transformations. However, the correct assessment of organic P mineralization is usually a challenging task because mineralized P is rapidly sorbed and most mineralization fluxes are very weak. The objectives of the present work were to quantify in five forest Spodosols at soil depths of 0-15 cm net mineralization of total organic P and the resulting increase in plant available inorganic P and to verify whether net or gross P mineralization could be estimated using the C or N mineralization rates. Net mineralization of total organic P was derived from the net changes in microbial P and gross mineralization of P in dead soil organic matter. We studied very low P-sorbing soils enabling us to use lower extractants to assess the change in total inorganic P as a result of gross mineralization of P in dead soil organic matter. In addition, to enable detection of gross mineralization of P in dead soil organic matter, a long-term incubation (517 days) experiment was carried out. At the beginning of the experiment, total P contents of the soils were very low (19-51 μg g⁻¹) and were essentially present as organic P (17-44 μg g⁻¹, 85-91%) or microbial P (6-14 μg g⁻¹; 24-39%). Conversely, the initial contents of inorganic P were low (2-7 μg g⁻¹; 9-15%). The net changes in the pool size of microbial P during the 517 days of incubation (4-8 μg g⁻¹) and the amounts of P resulting from gross mineralization of dead soil organic matter (0.001-0.018 μg g⁻¹ day⁻¹; 0.4-9.5 μg g⁻¹ for the entire incubation period) were considerable compared to the initial amounts of organic P and also when compared to the initial diffusive iP fraction (<0.3 μg g⁻¹). Diffusive iP corresponds to the phosphate ions that can be transferred from the solid constituents to the soil solution under a gradient of concentration. Net mineralization of organic P induced an important increase in iP in soil solution (0.6-10 μg g⁻¹; 600-5000% increase) and lower increases in diffusive iP fractions (0.3-5 μg g⁻¹; 300-2000% increase), soil solid constituents having an extremely low reactivity relative to iP. Therefore, soil micro-organisms and organic P transformations play a major role in the bioavailability of P in these forest soils. In our study, the dead soil organic matter was defined as a recalcitrant organic fraction. Probably because gross mineralization of P from this recalcitrant organic fraction was mainly driven by the micro-organisms’ needs for energy, the rates of gross mineralization of C, N and P in the recalcitrant organic fraction were similar. Indirect estimation of gross mineralization of P in dead soil organic matter using the gross C mineralization rate seems thus an alternative method for the studied soils. However, additional studies are needed to verify this alternative method in other soils. No relationships were found between microbial P release and microbial C and N releases.