Transformations of mineral nitrogen applied to peat soil during sequential oxic/anoxic cycling

Shifts in oxic and anoxic conditions in soil are most frequently caused by water table fluctuations, heavy rain, snowmelt or flooding, with potentially significant impacts on microbial processes and the ability of soils to convert mineral nitrogen to nitrogen gases efficiently. The impact of oxic/anoxic cycles on nitrogen transformation rates was therefore explored in the upper layer (0-30 cm) of partially degraded peat soil. We hypothesized that high denitrification potential would be conserved due to the high organic matter content of this soil. Mineral nitrogen was applied to approximately 1-cm deep layers of homogenized soil in microcosms, with no external source of readily degradable carbon. Microcosms were subjected to three cycles, each consisting of an oxic phase of 8-11 days and an anoxic phase of 21-28 days. Approximately 2% of the ammonium load was lost through ammonia volatilization during oxic phases and the remainder was nitrified. The accumulated nitrate decreased soil pH from 8.0 to 6.8 before its transformation through denitrification. Nitrification and denitrification rates during the three oxic/anoxic cycles (approximately three months) were 2.9-3.2 kg N ha⁻¹ d⁻¹ and 1.0-2.3 kg N ha⁻¹ d⁻¹, respectively. Extrapolation of these values to 30-cm deep soil layers gave rates that were sufficient for complete transformation of at least 1700 kg N ha⁻¹ of ammonium to nitrogen gases, which is ten-fold greater than the annual nitrogen application of 170 kg N ha⁻¹ permitted by the European directive. Denitrification rates decreased linearly during the three cycles (from 36 ± 2 to 16 ± 1 μg N g⁻¹ d⁻¹ dry soil), projecting cessation of denitrification activity and CO₂ production during the fifth cycle. Storage of peat soil at 4 °C most probably allowed slow degradation of organic matter that was completely oxidized to CO₂ after the soil was exposed to higher temperature (28 °C). Storage of soil for one year did not affect nitrification rate, but reduced denitrification rate, unless soil was amended with a readily degradable carbon source. The data suggest that, despite the high carbon content of this soil, it cannot sustain transformations of high N loads to nitrogen gases for prolonged periods without amendment with readily available carbon.     

Nitrate removal, denitrification and nitrous oxide production in the riparian zone of an ephemeral stream

Riparian zones are important features of the landscape that can buffer waterways from non-point sources of nitrogen pollution. Studies of perennial streams have identified denitrification as one of the dominant mechanisms by which this can occur. This study aimed to assess nitrate removal within the riparian zone of an ephemeral stream and characterise the processes responsible, particularly denitrification, using both in-situ and laboratory techniques. To quantify rates of groundwater nitrate removal and denitrification in-situ, nitrate was added to two separate injection-capture well networks in a perched riparian aquifer of a low order ephemeral stream in South East Queensland, Australia. Both networks also received bromide as a conservative tracer and one received acetylene to inhibit the last step of denitrification. An average of 77 ± 2% and 98 ± 1% of the added nitrate was removed within a distance of 40 cm from the injection wells (networks with acetylene and without, respectively). Based on rates of N₂O production in the network with added acetylene, denitrification was not a major mechanism of nitrate loss, accounting for only 3% of removal. Reduction of nitrate to ammonium was also not a major pathway in either network, contributing <4%. Relatively high concentrations of oxygen in the aquifer following recent filling by stream water may have reduced the importance of these two anaerobic pathways. Alternatively, denitrification may have been underestimated using the in-situ acetylene block technique. In the laboratory, soils taken from two depths at each well network were incubated with four nitrate-N treatments (ranging from ambient concentration to an addition of 15 mg N l⁻¹), with and without added acetylene. Potential rates of denitrification, N₂O production and N₂O:N₂ ratios increased with nitrate additions, particularly in shallow soils. Potential rates of denitrification observed in the laboratory were equivalent in magnitude to nitrate removal measured in the field (mean 0.26 ± 0.12 mg N kg of dry soil⁻¹ d⁻¹), but were two orders of magnitude greater than denitrification measured in the field with added acetylene. The relative importance of assimilatory vs. dissimilatory processes of nitrate removal depends on environmental conditions in the aquifer, particularly hydrology and its effects on dissolved oxygen concentrations. Depending on seasonal conditions, aquifers of ephemeral streams like the study site are likely to fluctuate between oxic and anoxic conditions; nevertheless they may still function as effective buffers. While denitrification to N₂ is a desirable outcome from a management perspective, assimilation into biomass can provide a rapid sink for nitrate, thus helping to reduce short-term delivery of nitrate downstream. Longer-term studies are needed to determine the overall effectiveness of riparian buffers associated with ephemeral streams in mitigating nitrate loads reaching downstream ecosystems.     

Methane concentrations and methanotrophic community structure influence the response of soil methane oxidation to nitrogen content in a temperate forest

Methane oxidation in forest soils removes atmospheric CH₄. Many studies have determined methane uptake rates and their controlling variables, yet the microorganisms involved have rarely been assessed simultaneously over the longer term. We measured methane uptake rates and the community structure of methanotrophic bacteria in temperate forest soil (sandy clay loam) on a monthly basis for two years in South Korea. Methane uptake rates at the field site did not show any seasonal patterns, and net uptake occurred throughout both years. In situ uptake rates and uptake potentials determined in the laboratory were 2.92 ± 4.07 mg CH₄ m⁻² day⁻¹ and 51.6 ± 45.8 ng CH₄ g⁻¹ soil day⁻¹, respectively. Contrary to results from other studies, in situ oxidation rates were positively correlated with soil nitrate concentrations. Short-term experimental nitrate addition (0.20-1.95 μg N g⁻¹ soil) significantly stimulated oxidation rates under low methane concentrations (1.7-2.0 ppmv CH₄), but significantly inhibited oxidation under high methane concentrations (300 ppmv CH₄). We analyzed the community structures of methanotrophic bacteria using a DNA-based fingerprinting method (T-RFLP). Type II methanotrophs dominated under low methane concentrations while Type I methanotrophs dominated under high methane concentrations. Nitrogen addition selectively inhibited Type I methanotrophic bacteria. Overall, the results of this study indicate that the effects of inorganic N on methane uptake depend on methane concentrations and that such a response is related to the dissimilar activation or inhibition of different types of methanotrophic bacteria.     

Denitrification enzyme activity and potential of subsoils under grazed grasslands assayed by membrane inlet mass spectrometer

The importance of subsoil denitrification on the fate of agriculturally derived nitrate (NO₃) leached to groundwater is crucial for budgeting N in an ecosystem and for identifying areas where the risk of excess NO₃ is reduced. However, the high atmospheric background of di-nitrogen (N₂) causes difficulties in assessing denitrification enzyme activity (DEA) and denitrification potential (DP) in soils directly. Here, we apply Membrane Inlet Mass Spectrometry (MIMS) technique to investigate indirectly DEA and DP in soils by measuring N₂/Ar ratio changes in headspace water over soil. Soils were collected from 0-10, 15-25 and 60-70 cm depths of a grazed ryegrass and grass-clover. The samples were amended with helium-flushed deionized water containing ranges of NO₃ and carbon (glucose-C) and were incubated for six hours in the dark at 21 °C. The peaks for N₂/Ar ratio, declined with increasing soil depth, indicating a reduced substrate requirements to initiate DEA en-masse (15-30 mg NO₃-N alone or with 60-120 mg glucose-C, kg⁻¹ soil). The dissolved N₂O concentrations were very small (0.004-0.269 μg N kg⁻¹ soil) but responded well to the added N and C, showing a reduction in DEA with soil depth. In three separate studies, only subsoils were incubated for 3 days at 12 °C with 20-30 mg NO₃-N ± 40-60 mg glucose-C, kg⁻¹ soil. Denitrification capacity (DC, NO₃ only treatment) was not statistically different to the control (no amendment) within a land use (0.03-0.05 vs. 0.07-0.22 mg N kg⁻¹ soil d⁻¹), the highest being in ryegrass subsoils receiving groundwater. The DP was significantly (P < 0.0001) higher in subsoils under ryegrass than under grass-clover (0.50-0.71 vs. 1.15 mg N kg⁻¹ soil d⁻¹). The rates of DP (NO₃ + glucose-C) increased significantly (P < 0.0001) in unsaturated and saturated subsoils (0.92 and 2.19 mg N kg⁻¹ soil d⁻¹, respectively) of grass-clover, due to the higher reductive state resulting from the 10 day pre-incubation. Available C accelerated denitrification in soils and superseded the temporary elevation in oxidative state due to NO₃ addition. The substrates load differences between the land uses regulated the degree of denitrification rates. Results suggest that both dissolved N₂O measured by gas chromatography and N₂/Ar ratio measured by MIMS to indirectly determine DEA, and the latter to quantify total DC/DP in soils can be used. However, interference of oxygen in the MIMS system should be considered if available C is added or is naturally elevated in soil or groundwater.     

Variation in NH4 mineralization and microbial communities with stand age in lodgepole pine (Pinus contorta) forests, Yellowstone National Park (USA)

Soils and vegetation were analyzed in 20 lodgepole pine (Pinus contorta) forest stands, varying in age from 50 to 350 years, that had initiated following stand-replacing fire. Our goal was to determine how nitrogen availability (NH₄⁺-N) and microbial community composition varied with stand age-class and to determine whether differences could be explained by canopy, soil, or understory characteristics. Gross NH₄⁺ mineralization was measured using laboratory isotopic pool dilution, and microbial community composition was evaluated using microbial membrane lipids. The microbial community composition of stands in the 300-350 age class was distinct from stands in younger age classes. Microbial community composition among sites varied with pH, % organic matter, and phosphorus. Gross NH₄⁺ mineralization rates averaged 1.45±0.07 mg NH₄⁺ kg soil⁻¹ d⁻¹ while consumption averaged 1.37±0.20 mg NH₄⁺ kg soil⁻¹ d⁻¹, resulting in low net NH₄⁺ mineralization rates (0.08±0.18 mg NH₄⁺ kg soil⁻¹ d⁻¹), but rates were not significantly different with stand age-class at p<0.05. At p<0.10, net NH₄⁺ mineralization was significantly higher in the 300-350 age class compared to the 125-175 age class. None of the measured variables significantly explained NH₄⁺ consumption and net mineralization patterns. However, gross NH₄⁺ mineralization rates were best explained by information on microbial community structure (i.e. lipids). Variation among stands within a given age-classes was high, indicating that patterns of N cycling across landscapes reflect substantial heterogeneity among mature stands.     

Nitrogen losses from two grassland soils with different fungal biomass

Nitrogen losses from agricultural grasslands cause eutrophication of ground- and surface water and contribute to global warming and atmospheric pollution. It is widely assumed that soils with a higher fungal biomass have lower N losses, but this relationship has never been experimentally confirmed. With the increased interest in soil-based ecosystem services and sustainable management of soils, such a relationship would be relevant for agricultural management. Here we present a first attempt to test this relationship experimentally. We used intact soil columns from two plots from a field experiment that had consistent differences in fungal biomass (68 ± 8 vs. 111 ± 9 μg C g⁻¹) as a result of different fertilizer history (80 vs. 40 kg N ha⁻¹ y⁻¹ as farm yard manure), while other soil properties were very similar. We performed two greenhouse experiments: in the main experiment the columns received either mineral fertilizer N or no N (control). We measured N leaching, N₂O emission and denitrification from the columns during 4 weeks, after which we analyzed fungal and bacterial biomass and soil N pools. In the additional ¹⁵N experiment we traced added N in leachates, soil, plants and microbial biomass. We found that in the main experiment, N₂O emission and denitrification were lower in the high fungal biomass soil, irrespective of the addition of fertilizer N. Higher ¹⁵N recovery in the high fungal biomass soil also indicated lower N losses through dentrification. In the main experiment, N leaching after fertilizer addition showed a 3-fold increase compared to the control in low fungal biomass soil (11.9 ± 1.0 and 3.9 ± 1.0 kg N ha⁻¹, respectively), but did not increase in high fungal biomass soil (6.4 ± 0.9 after N addition vs. 4.5 ± 0.8 kg N ha⁻¹ in the control). Thus, in the high fungal biomass soil more N was immobilized. However, the ¹⁵N experiment did not confirm these results; N leaching was higher in high fungal biomass soil, even though this soil showed higher immobilization of ¹⁵N into microbial biomass. However, only 3% of total ¹⁵N was found in the microbial biomass 2 weeks after the mineral fertilization. Most of the recovered ¹⁵N was found in plants (approximately 25%) and soil organic matter (approximately 15%), and these amounts did not differ between the high and the low fungal biomass soil. Our main experiment confirmed the assumption of lower N losses in a soil with higher fungal biomass. The additional ¹⁵N experiment showed that higher fungal biomass is probably not the direct cause of higher N retention, but rather the result of low nitrogen availability. Both experiments confirmed that higher fungal biomass can be considered as an indicator of higher nitrogen retention in soils.     

Effects of decreasing water potential on gross ammonification and nitrification in an acid coniferous forest soil

Changes in the soil water regime, predicted as a consequence of global climate change, might influence the N cycle in temperate forest soils. We investigated the effect of decreasing soil water potentials on gross ammonification and nitrification in different soil horizons of a Norway spruce forest and tested the hypotheses that i) gross rates are more sensitive to desiccation in the Oa and EA horizon as compared to the uppermost Oi/Oe horizon and ii) that gross nitrification is more sensitive than gross ammonification. Soil samples were adjusted by air drying to water potentials from about field capacity to around −1.0 MPa, a range that is often observed under field conditions at our site. Gross rates were measured using the ¹⁵N pool dilution technique. To ensure that the addition of solute label to dry soils and the local rewetting does not affect the results by re-mineralization or preferential consumption of ¹⁵N, we compared different extraction and incubation times.T₀ times ranging from 10 to 300 min and incubation times of 48 h and 72 h did not influence the rates of gross ammonification and nitrification. Even small changes of water potential decreased gross ammonification and nitrification in the O horizon. In the EA horizon, gross nitrification was below detection limit and the response of the generally low rates of gross ammonification to decreasing water potentials was minor. In the Oi/Oe horizon gross ammonification and nitrification decreased from 37.5 to 18.3 mg N kg⁻¹ soil d⁻¹ and from 15.4 to 5.6 mg N kg⁻¹ soil d⁻¹ when the water potential decreased from field capacity to −0.8 MPa. In the Oa horizon gross ammonification decreased from 7.4 to 4.0 mg N kg⁻¹ soil d⁻¹ when the water potential reached −0.6 MPa. At such water potential nitrification almost ceased, while in the Oi/Oe horizon nitrification continued at a rather high level. Hence, only in the Oa horizon nitrification was more sensitive to desiccation than ammonification. Extended drought periods that might result from climate change will cause a reduction in gross N turnover rates in forest soils even at moderate levels of soil desiccation.     

The excretion of ammonium by enchytraeids (Cognettia sphagnetorum)

Enchytraeids are involved both directly and indirectly in decomposition processes and nitrogen mineralization in soil. Their influence is especially important in nitrogen poor ecosystems such as heathland where the enchytraeid species, Cognettia sphagnetorum, is often abundant and playing a significant role in the N-cycling. The objective of this study was to quantify NH₄⁺-N excretion of C. sphagnetorum at different temperatures. The results were combined with investigations of population dynamics during one year to estimate annual NH₄⁺-N excretion of the population of C. sphagnetorum in a dry Danish heath soil. C. sphagnetorum significantly increased its NH₄⁺-N excretion rate with increasing temperature. At 5 °C about 0.5 μg NH₄⁺-N mg dry weight⁻¹ day⁻¹ was excreted increasing to about 3.3 μg NH₄⁺-N mg dry weight⁻¹ day⁻¹ at 20 °C. Average enchytraeid biomass in the field was 2.5-3.5 g dry weight m⁻² during cool and wet periods. Dry and warm conditions in May and June, 2008, had a drastic and long-term negative impact on the enchytraeid community. The excretion of NH₄⁺-N by enchytraeids was therefore highest during the cool and moist months despite low temperatures (October 2007-May 2008) and amounted to about 2 mg NH₄⁺-N m⁻² day⁻¹ during this period. The estimated annual NH₄⁺-N excretion of the enchytraeid community was approximately 0.3 g N m⁻² year⁻¹. The results of the present study and the method described for estimation of N-excretion can increase our understanding of enchytraeids’ role in nitrogen mineralization.     

Differential and successive effects of residue quality and soil mineral N on water-stable aggregation during crop residue decomposition

Residue quality has been shown to influence soil water-stable aggregation (WSA) during crop residue decomposition, but there is still little information about its interactive effect with soil mineral N availability. The aim of this study was to determine the effect of soil mineral N on WSA during the decomposition of two high-C/N crop residues (wheat straw with C/N = 125.6 and miscanthus straw with C/N = 311.3). The two crop residues were combined with three mineral N addition rates (0, 60, and 120 mg N kg⁻¹ dry soil). Respiration, soil mineral N content, and WSA (expressed as mean-weight diameter, MWD) were measured on several dates during a 56-d incubation. The effect of decomposing crop residues on WSA followed two phases. (i) Between 0 and 7 d, the increase in WSA was related to intrinsic residue quality with higher decomposability of the wheat straw resulting in higher WSA. (ii) Thereafter, and until the end of the experiment, mineral N addition rates had a predominant but negative influence on WSA. In this second phase, the average MWD of residue-treated soils was 0.92, 0.55, and 0.44 mm for the 0, 60 and 120 mg N kg⁻¹ dry soil addition rates, respectively. Mineral N addition which did result in higher crop residue decomposition did not lead to higher WSA. WSA during crop residue decomposition is therefore not simply positively related to the induced microbial activity, and changes in microbial community composition with differential effects on WSA must be involved. The impact of high-C/N crop residues inputs on WSA, initially assumed to be low, could actually be strong and long-lasting in situations with low soil mineral N content.     

Immobilization and remineralization of N following addition of wheat straw into soil: determination of gross N transformation rates by N-ammonium isotope dilution technique

N dynamics in soil where wheat straw was incorporated were investigated by a soil incubation experiment using ¹⁵N-labelled nitrate or ¹⁵N-labelled wheat straw. The incubated soils were sampled after 7, 28, 54 days from the incorporation of wheat straw, respectively, and gross rates of N transformations including N remineralization and temporal changes in the amount of microbial biomass were determined.Following the addition of wheat straw into soils, rapid decrease of nitrate content in soil and increase of microbial biomass C and N occurred within the first week from onset of the experiment. Both the gross rates of mineralization and immobilization determined by ¹⁵N-ammonium isotope dilution technique were remarkably enhanced by the addition of wheat straw, and gradually decreased with time. Remineralization rate of N derived from ¹⁵N-labelled nitrate, and mineralization rate of N derived from ¹⁵N-labelled wheat straw was estimated by ¹⁵N isotope dilution technique using non-labelled ammonium. Remineralization rates of N derived from ¹⁵N-labelled nitrate were calculated to be 0.71 mg N kg⁻¹ d⁻¹ after 7 days, 0.55 mg N kg⁻¹ d⁻¹ after 28 days, and 0.29 mg N kg⁻¹ d⁻¹ after 54 days.Nearly 10% of the ¹⁵N-labelled N originally contained in the wheat straw was held in the microbial biomass irrespective of the sampling time. The amount of inorganic N in soil which was derived from ¹⁵N-labelled wheat straw ranged between 1.93 and 2.37 mg N kg⁻¹.Rates of N transformations in soil with ¹⁵N-labelled wheat straw were obtained by assuming that the k value was equal to the ¹⁵N abundance of biomass N, and the obtained values were considered to be valid.     

CH4 oxidation and N2O emissions at varied soil water-filled pore spaces and headspace CH4 concentrations

Emission of N₂O and CH₄ oxidation rates were measured from soils of contrasting (30-75%) water-filled pore space (WFPS). Oxidation rates of ¹³C-CH₄ were determined after application of 10 μl ¹³C-CH₄ l⁻¹ (10 at. % excess ¹³C) to soil headspace and comparisons made with estimates from changes in net CH₄ emission in these treatments and under ambient CH₄ where no ¹³C-CH₄ had been applied. We found a significant effect of soil WFPS on ¹³C-CH₄ oxidation rates and evidence for oxidation of 2.2 μg ¹³C-CH₄ d⁻¹ occurring in the 75% WFPS soil, which may have been either aerobic oxidation occurring in aerobic microsites in this soil or anaerobic CH₄ oxidation. The lowest ¹³C-CH₄ oxidation rate was measured in the 30% WFPS soil and was attributed to inhibition of methanotroph activity in this dry soil. However, oxidation was lowest in the wetter soils when estimated from changes in concentration of ¹²⁺¹³C-CH₄. Thus, both methanogenesis and CH₄ oxidation may have been occurring simultaneously in these wet soils, indicating the advantage of using a stable isotope approach to determine oxidation rates. Application of ¹³C-CH₄ at 10 μl ¹³C-CH₄ l⁻¹ resulted in more rapid oxidation than under ambient CH₄ conditions, suggesting CH₄ oxidation in this soil was substrate limited, particularly in the wetter soils. Application of and (80 mg N kg soil⁻¹; 9.9 at.% excess ¹⁵N) to different replicates enabled determination of the respective contributions of nitrification and denitrification to N₂O emissions. The highest N₂O emission (119 μg ¹⁴⁺¹⁵N-N₂O kg soil⁻¹ over 72 h) was measured from the 75% WFPS soil and was mostly produced during denitrification (18.1 μg ¹⁵N-N₂O kg soil⁻¹; 90% of ¹⁵N-N₂O from this treatment). Strong negative correlations between ¹⁴⁺¹⁵N-N₂O emissions, denitrified ¹⁵N-N₂O emissions and ¹³C-CH₄ concentrations (r=−0.93 to −0.95, N₂O; r=−0.87 to −0.95, denitrified ¹⁵N-N₂O; P<0.05) suggest a close relationship between CH₄ oxidation and denitrification in our soil, the nature of which requires further investigation.     

Chemical composition, or quality, of agroforestry residues influences N2O emissions after their addition to soil

Emissions of N₂O were measured following addition of ¹⁵N-labelled (2.6-4.7 atom% excess ¹⁵N) agroforestry residues (Sesbania sesban, mixed Sesbania/Macroptilium atropurpureum, Crotalaria grahamiana and Calliandra calothyrsus) to a Kenyan oxisol at a rate of 100 mg N kg soil⁻¹ under controlled environment conditions. Emissions were increased following addition of residues, with 22.6 mg N m⁻² (124.4 mg N m⁻² kg biomass⁻¹; 1.1 mg ¹⁵N m⁻²; 1.03% of ¹⁵N applied) emitted as N₂O over 29 d after addition of both Sesbania and Macroptilium residues in the mixed treatment. Fluxes of N₂O were positively correlated with CO₂ fluxes, and N₂O emissions and available soil N were negatively correlated with residue lignin content (r=−0.49;P<0.05), polyphenol content (r=−0.94;P<0.05), protein binding capacity (r=−0.92;P<0.05) and with (lignin+polyphenol)-to-N ratio (r=−0.55;P<0.05). Lower emission (13.6 mg N m⁻² over 29 d; 94.5 mg N m⁻² kg biomass⁻¹; 0.6 mg ¹⁵N m⁻²; 0.29% of ¹⁵N applied) after addition of Calliandra residue was attributed to the high polyphenol content (7.4%) and high polyphenol protein binding capacity (383 μg BSA mg plant⁻¹) of this residue binding to plant protein and reducing its availability for microbial attack, despite the residue having a N content of 2.9%. Our results indicate that residue chemical composition, or quality, needs to be considered when proposing mitigation strategies to reduce N₂O emissions from systems relying on incorporation of plant biomass, e.g. improved-fallow agroforestry systems, and that this consideration should extend beyond the C-to-N ratio of the residue to include polyphenol content and their protein binding capacity.     

Soil properties influencing the denitrification potential of Flemish agricultural soils

The denitrification potential of the soil horizons between 0- and 90-cm depth of 20 agricultural fields, representative of the most frequent combinations of agricultural crops and soil textures in Flanders (Belgium), and the factors affecting the denitrification potential were studied in the laboratory under controlled conditions. The denitrification potential in the presence of an added soluble C and N source was measured at 15°C after saturation of air-dried soil samples with water. The denitrification potential of the lower horizons was generally negligible compared to the upper horizons. The lower denitrification potential of the deeper horizons could partially be explained by their limited C availability. The denitrification potential of the upper horizons strongly depended on texture. Based on this parameter the soils could be divided into three groups: soils with a high clay content (>30% clay) were characterised by a high denitrification potential (>8.33 µg N g^-1 dry soil day^-1); soils with medium texture had a medium denitrification potential, between 0.41 and 7.25 µg N g^-1 dry soil day^-1; and soils with a high sand content (>80% sand) had a low denitrification potential (<2.58 µg N g^-1 dry soil day^-1). In most cases, extending the saturation period during pre-incubation increased the denitrification potential. Comparison of the denitrification potential of the upper horizons with and without addition of a soluble C source showed that the denitrification potential of the upper horizons of these soils was limited by their percentage of endogenous C. The measured denitrification potentials indicate that denitrification losses in soils high in clay content can be important when NO₃ ^- concentrations are high.     

Strong inhibitory effect of nitrate on atmospheric methane oxidation in forest soils

We investigated inhibitory effects of ammonium and nitrate on soil methane oxidation in two forests. Mineral soils in a forest with low nitrogen-deposition had much higher methane oxidation rates than those observed in nitrogen-saturated forest soils with higher nitrogen-deposition. Nitrate addition to soils from a low nitrogen-deposition site exhibited a stronger inhibitory effect on methane oxidation than either ammonium or potassium. The decrease in soil pH accompanied by the addition of nitrate was not responsible for this repression. Our results indicate that even a level of nitrate observed in N-saturated forests (dozens of μg N g soil⁻¹) exerts a strong inhibitory effect on the oxidation of atmospheric methane, although the mechanism remains unresolved.     

Rewetting and litter addition influence mineralisation and microbial communities in soils from a semi-arid intermittent stream

Nitrogen (N) and carbon (C) mineralisation are triggered by pulses of water availability in arid and semi-arid systems. Intermittent streams and their associated riparian communities are obvious ‘hot spots’ for biogeochemical processes in arid landscapes where water and often C are limiting. Stream landscapes are characterized by highly heterogeneous soils that may respond variably to rewetting. We used a laboratory incubation to quantify how N and C mineralisation in rewetted soils and sediments from an intermittent stream in the semi-arid Pilbara region of north-west Australia varied with saturation level and substrate addition (as ground Eucalyptus litter). Full (100%) saturation was defined as the maximum gravimetric moisture content (%) achieved in free-draining soils and sediments after rewetting, with 50% saturation defined as half this value. We estimated rates and amounts of N mineralised from changes in inorganic N and microbial respiration as CO₂ efflux throughout the incubation. In soils and sediments subject to 50% saturation, >90% of N mineralised accumulated within the first 7 d of incubation, compared to only 48% when soils were fully saturated (100% saturation). Mineralisation rates and microbial respiration were similar in riparian and floodplain soils, and channel sediments. N mineralisation rates in litter-amended soils and sediments (0.73 mg N kg⁻¹ d⁻¹) were only one-third that of unamended samples (3.04 mg N kg⁻¹ d⁻¹), while cumulative microbial respiration was doubled in litter-amended soils, suggesting N was more rapidly immobilized. Landscape position was less important in controlling microbial activity than soil saturation when water-filled pore space (% WFPS) was greater than 40%. Our results suggest that large pulses of water availability resulting in full soil saturation cause a slower release of mineralisation products, compared to small pulse events that stimulate a rapid cycle of C and N mineralisation-immobilization.     

Mineralization and denitrification in upland, nearly saturated and flooded subtropical soil I. Effect of nitrate and ammoniacal nitrogen

 The influence of fertilizer N applied through nitrate and ammoniacal sources on the availability of nitrate, supply of C, and gaseous N losses via denitrification (using acetylene inhibition technique) in a semiarid subtropical soil (Typic Ustochrepts) was investigated in a growth chamber simulating upland [60% water-filled pore space (WFPS)], nearly saturated (90% WFPS), and flooded (120% WFPS) conditions. The rate of denitrification was very low in the upland soil conditions, irrespective of fertilizer N treatments. Increasing water content to nearly saturated and flooded conditions resulted in four- to sixfold higher rates of denitrification within 2 days, suggesting that the denitrifying activity commences quickly. Results of this study reveal that (1) under restricted aeration, these soils could support high rates of denitrification (∼6 mg N kg^–1 day^–1) for short periods when nitrate is present; (2) application of fertilizer N as nitrate enhances N losses via denitrification (∼10 mg N kg^–1 day^–1) – however, the supply of available C determines the intensity and duration of denitrification; (3) when fertilizer N is applied as an ammoniacal form, nitrification proceeds slowly and nitrate availability limits denitrification in flooded soil; (4) the nearly saturated soil, being partially aerobic, supported greater nitrification of applied ammoniacal fertilizer N than flooded soil resulting in higher relative rates of denitrification; and (5) under aerobic soil conditions, 26 mg mineral N kg^–1 accumulated in control soil over a 16-day period, demonstrating a modest capacity of such semiarid subtropical soils, low in organic matter, to supply N to growing plants. Received: 7 June 1999     

Methane fluxes and nitrogen dynamics from a drained fenland peat

 Rates of methane uptake were measured in incubation studies with intact cores from adjacent fenland peats that have been under arable management and woodland management for at least the past 30 years. On two separate occasions the woodland peat showed greater rates of uptake than the arable peat. These rates ranged from 23.1 to 223.3 μg CH₄ m^–2 day^–1 for the woodland peat and from 29.6 to 157.6 μg CH₄ m^–2 day^–1 for the arable peat. When the peats were artificially flooded there was a decrease in the rate of methane oxidation, but neither site showed any net efflux of methane. ¹⁵N isotopic dilution was used to characterise nitrogen cycling within the two peats. Both showed similar rates of gross nitrogen mineralisation (3.58 mg N kg^–1 day^–1, arable peat; 3.54 N kg^–1 day^–1, woodland peat) and ammonium consumption (4.19 arable peat and 4.70 mg N kg^–1 day^–1 woodland peat). There were significant differences in their inorganic ammonium and nitrate pool sizes, and the rate of gross nitrification was significantly higher in the woodland peat (4.90 mg N kg^–1 day^–1) compared to the arable peat (1.90 mg N kg^–1 day^–1). These results are discussed in the light of high atmospheric nitrogen deposition. Received: 1 December 1997     

Seasonal variations of nitrous oxide emission in relation to nitrogen fertilization and energy crop types in sandy soil

Nitrous oxide (N₂O) is a greenhouse gas and agricultural soils are major sources of atmospheric N₂O. Its emissions from soils make up the largest part in the global N₂O budget. Research was carried out at the experimental fields of the Leibniz-Institute of Agricultural Engineering Potsdam-Bornim (ATB). Different types (mineral and wood ash) and levels (0, 75 and 150 kg N ha⁻¹) of fertilization were applied to annual (rape, rye, triticale and hemp) and perennial (poplar and willow) plants every year. N₂O flux measurements were performed 4 times a week by means of gas flux chambers and an automated gas chromatograph between 2003 and 2005. Soil samples were also taken close to the corresponding measuring rings. Soil nitrate and ammonium were measured in soil extracts.N₂O emissions had a peak after N fertilization in spring, after plant harvest in summer and during the freezing–thawing periods in winter. Both fertilization and plant types significantly altered N₂O emission. The maximum N₂O emission rate detected was 1081 μg N₂O m⁻² h⁻¹ in 2004. The mean annual N₂O emissions from the annual plants were more than twofold greater than those of perennial plants (4.3 kg ha⁻¹ vs. 1.9 kg ha⁻¹). During January, N₂O fluxes considerably increased in all treatments due to freezing–thawing cycles. Fertilization together with annual cropping doubled the N₂O emissions compared to perennial crops indicating that N use efficiency was greater for perennial plants. Fertilizer-derived N₂O fluxes constituted about 32% (willow) to 67% (rape/rye) of total soil N₂O flux. Concurrent measurements of soil water content, NO₃ and NH₄ support the conclusion that nitrification is main source of N₂O loss from the study soils. The mean soil NO₃-N values of soils during the study for fertilized soils were 1.6 and 0.9 mg NO₃-N kg⁻¹ for 150 and 75 kg N ha⁻¹ fertilization, respectively. This value reduced to 0.5 mg NO₃-N kg⁻¹ for non-fertilized soils.     

Residue incorporation and N fertilization affect the response of soil nematodes to the elevated CO2 in a Chinese wheat field

The interplay between the carbon and other nutrient cycles is the key to understand the responses of soil ecosystems to climatic change. Using the free-air CO₂ enrichment (FACE) techniques, we carried out a multifactorial experiment in a Chinese rice-wheat rotation system, to investigate the response of soil nematodes to elevated CO₂ under different application rates of N fertilizer (225.0 kg N ha⁻¹ (HN) and 112.5 kg N ha⁻¹(LN), respectively) and residue incorporation (0 kg C ha⁻¹ (ZR), 1000 kg C ha⁻¹ (MR) and 2000 kg C ha⁻¹ (HR), respectively). This study was conducted during the wheat growing season of 2007 after expose to the elevated CO₂ for three years. The results in our study indicated that seasonality is an important factor in determining changes in the nematode abundance and diversity. The residue addition effects were more obvious than the elevated CO₂, which significantly influenced the abundance of total nematodes and plant-parasites, and some ecological indices. The interactions between residue addition and CO₂ significantly influenced nematode dominance and structure indices. High level of N fertilization was found to decrease the nematode diversity, generic richness and maturity indices at wheat jointing stage. There are significant interactions between N fertilization and elevated CO₂ for abundance of total nematodes and different trophic groups.     

Soil organic matter dynamics and land use change at a grassland/forest ecotone

In the grassland/forest ecotone of North America, many areas are experiencing afforestation and subsequent shifts in ecosystem carbon (C) stocks. Ecosystem scientists commonly employ a suite of techniques to examine how such land use changes can impact soil organic matter (SOM) forms and dynamics. This study employs four such techniques to compare SOM in grassland (Bromus inermis) and recently forested (∼35 year, Ulmus spp. and Quercus spp.) sites with similar soil types and long-term histories in Kansas, USA. The work examines C and nitrogen (N) parameters in labile and recalcitrant SOM fractions isolated via size and density fractionation, acid hydrolysis, and long-term incubations. Size fractionation highlighted differences between grassland and forested areas. N concentration of forested soils’ 63-212 μm fraction was higher than corresponding grassland soils’ values (3.0±0.3 vs. 2.3±0.3 mg g_fraction⁻¹, P<0.05), and N concentration of grassland soils’ 212-2000 μm fraction was higher than forested soils (3.0±0.4 vs. 2.3±0.2 mg g_fraction⁻¹, P<0.05). Similar trends were observed for these same fractions for C concentration; forested soils exhibited 1.3 times the C concentration in the 63-212 μm fraction compared to this fraction in grassland soils. Fractions separated via density separation and acid hydrolysis exhibited no differences in [C], [N], δ¹⁵N, or δ¹³C when compared across land use types. Plant litterfall from forested sites possessed significantly greater N concentrations than that from grassland sites (12.41±0.10 vs. 11.62±0.19 mg g_litter⁻¹). Long-term incubations revealed no differences in C or N dynamics between grassland and forested soils. δ¹³C and δ¹⁵N values of the smallest size and the heavier density fractions, likely representing older and more recalcitrant SOM, were enriched compared to younger and more labile SOM fractions; δ¹⁵N of forested soils’ 212-2000 μm fraction were higher than corresponding grassland soils (1.7±0.3‰ vs. 0.5±0.4‰). δ¹³C values of acid hydrolysis fractions likely reflect preferential losses of ¹³C-depleted compounds during hydrolysis. Though C and N data from size fractions were most effective at exhibiting differences between grassland and forested soils, no technique conclusively indicates consistent changes in SOM dynamics with forest growth on these soils. The study also highlights some of the challenges associated with describing SOM parameters, particularly δ¹³C, in SOM fractions isolated by acid hydrolysis.