Pathotypes and phylogenetic variation determine downy mildew epidemics in Brassica spp. in Australia

Isolates of Hyaloperonospora brassicae inoculated onto cotyledons of 28 diverse Brassicaceae genotypes, 13 from Brassica napus, two from B. juncea, five from B. oleracea, two from Eruca vesicaria, and one each from B. nigra, B. carinata, B. rapa, Crambe abyssinica, Raphanus sativus and R. raphanistrum, showed significant effects (P ≤ 0.001) of isolate, host and their interaction. Host responses ranged from no visible symptom or a hypersensitive response, to systemic spread and abundant pathogen sporulation. Isolates were generally most virulent on their host of origin. Using an octal classification, six host genotypes were identified as suitable host differentials to characterize pathotypes of H. brassicae and distinguished eight distinct pathotypes. There were fewer, but more virulent, pathotypes in 2015–2016 isolates than 2006–2008 pathogen populations, probably explaining the increase in severity of canola downy mildew over the past decade. Phylogenetic relationships determined across 20 H. brassicae isolates collected in 2006–2008 and 88 isolates collected in 2015–2016 showed seven distinct clades, with 70% of 2006–2008 isolates distributed within clade I (bootstrap value (BVs) of 100%) and the remaining 30% in clade V (BVs 83.3%). This is the first study to define phylogenetic relationships of H. brassicae isolates in Australia, setting a benchmark for understanding current and future genetic shifts within pathogen populations; it is also the first to use octal classification to characterize pathotypes of H. brassicae, providing a novel basis for standardizing phenotypic characterization and monitoring of pathotypes on B. napus and some crucifer species in Australia.     

Genetics of resistance to downy mildew in Brassica oleracea and breeding towards durable disease control for UK vegetable production

Downy mildew resistance was previously identified from screening a Brassica oleracea collection against two standard UK isolates of Hyaloperonospora parasitica. Sources of resistance were chosen from this material and developed further in this study by generating doubled haploid (DH) and inbred lines. Seedlings from the new lines were tested for resistance to a larger collection of H. parasitica isolates collected in 2001–2002 and 2007–2008 from the main broccoli and cauliflower production regions of the UK. Three lines (derived from borecole or summer cabbage) were broadly resistant to the pathogen isolates. Three of the remaining lines exhibited strong isolate‐specific resistance; several examples of weak or basal level of resistance to some isolates were observed. A new H. parasitica variant collected in 2008 was virulent in the broadly resistant lines, but was avirulent in a line with narrow specificity of resistance. The F₂ and BC₁ seedlings derived from outcrossing each of the three broadly resistant lines to susceptible broccoli and cauliflower lines segregated in a manner indicating that the resistance was controlled by a single dominant gene. No susceptibility was observed amongst F₂ seedlings derived from intercrossing the three resistant lines, indicating that they all share the same or closely linked broad‐spectrum resistance gene(s). DH lines were produced from F₁ plants, and resistant plants were further backcrossed to produce broccoli and cauliflower‐like lines that could be useful pre‐breeding material. A combination of resistance from lines with broad and narrow specificity is recommended for controlling downy mildew in UK brassica production.     

Virulence phenotypes in powdery mildew (Blumeria graminis) populations and resistance genes in triticale (x Triticosecale)

Triticale (xTriticosecale) is a new host for powdery mildew (Blumeria graminis) being not infected by this pathogen in Germany before 2001. To evaluate population structure of the pathogen and race-specific resistances in the host, 694 isolates were collected in 12 states of Germany in the years 2007 to 2009 on triticale. They were tested by a newly developed initial differential set of 20 triticale cultivars. Corresponding virulences were found for all differentials except for cultivar Grenado. In total, 272 different virulence phenotypes (=pathotypes) were detected. The virulence complexity of the isolates ranged from 6 to 19 of 20 possible virulences with a mean of 15. In all years, a high level of diversity of the powdery mildew populations was observed with Simpson indices in the range 0.95 to 0.97. The distribution of the pathotypes was even across Germany with an Evenness index in the range 0.82 to 0.88. A set of 19 isolates with different virulence pathotypes and 10 cultivars were selected to be used to identify race-specific resistances of triticale cultivars and breeding lines. Some cultivars susceptible to most of the isolates in seedling stage were moderately resistant in adult-plant stage. The high diversity and complexity of the pathotypes found in German powdery mildew populations as well as an increasing acreage of only a few dominating triticale cultivars accelerate the adaptation of the pathogen to race-specific host resistances suggesting restricted durability only. More durable resistance might be achieved by combining new effective race-specific (qualitative) resistance genes with race-nonspecific (quantitative) resistances effective in the adult-plant stage that are already available.     

Characteristics of a <Emphasis Type="Italic">Plasmopara angustiterminalis</Emphasis> isolate from <Emphasis Type="Italic">Xanthium strumarium</Emphasis>

Leaves of Xanthium strumarium infected with downy mildew were collected in the vicinity of a sunflower field in southern Hungary in 2003. Based on phenotypic characteristics of sporangiophores, sporangia and oospores as well as host preference the pathogen was classified as Plasmopara angustiterminalis. Additional phenotypic characters were investigated such as the size of sporangia, the number of zoospores per sporangium and the time-course of their release. Infection studies revealed infectivity of the P. angustiterminalis isolate to both X. strumarium and Helianthus annuus. Inoculation of the sunflower inbred line, HA-335 with resistance to all known P. halstedii pathotypes, resulted in profuse sporulation on cotyledons and formation of oospores in the bases of hypocotyls. Infections of sunflower differential lines often led to damping-off. Molecular genetic analysis using simple sequence repeat primers and nuclear rDNA sequences revealed clear differences to Plasmopara halstedii, the downy mildew pathogen of sunflower.     

Identification of Brassica accessions resistant to ‘old’ and ‘new’ pathotypes of Plasmodiophora brassicae from Canada

Genetic resistance is the main tool used to manage clubroot of canola (Brassica napus) in Canada. However, the emergence of new virulent strains of the clubroot pathogen, Plasmodiophora brassicae, has complicated canola breeding efforts. In this study, 386 Brassica accessions were screened against five single-spore isolates (represented by pathotypes 2F, 3H, 5I, 6M and 8N on the Canadian Clubroot Differential Set) and 17 field isolates (represented by 12 unique pathotypes: 2B, 3A, 3D, 3O, 5C, 5G, 5K, 5L, 5X, 8E, 8J and 8P) of P. brassicae to identify resistance sources effective against these strains. The results showed that one B. rapa accession (CDCNFG-046, mean index of disease (ID) = 3.3%) and two B. nigra accessions (CDCNFG-263, mean ID = 3.1%; and CDCNFG-262, mean ID = 4.7%) possessed excellent resistance to all 22 of the isolates evaluated. Fifty other accessions showed differential clubroot reactions (resistant, moderately resistant or susceptible), including 27 (one B. napus, two B. rapa, four B. oleracea and 20 B. nigra) accessions that were each resistant to 8–21 P. brassicae isolates, but developed mean IDs in the range of 5.3–29.6%. The remaining 23 accessions (two B. napus, one B. rapa, five B. oleracea and 15 B. nigra) were each resistant to 3–13 isolates, but developed mean IDs in the range of 30.3–47.0%. The three accessions that showed absolute resistance and the 50 accessions that showed differential clubroot reactions could be used to breed for resistance to the new P. brassicae strains.     

Interactions in the Brassica napus–Pyrenopeziza brassicae pathosystem and sources of resistance to P. brassicae (light leaf spot)

Pyrenopeziza brassicae, cause of light leaf spot (LLS), is an important pathogen of oilseed rape and vegetable brassicas and has a wide geographic distribution. Exploitation of host resistance remains the most sustainable and economically viable solution for disease management. This study evaluated 18 oilseed rape cultivars or breeding lines for host resistance against P. brassicae in glasshouse experiments. Selected cultivars/lines were inoculated with eight single-spore isolates of the pathogen obtained from three different regions in England. Analysis of P. brassicae infection-related changes on host plants identified leaf deformation as a characteristic feature associated with P. brassicae infection, this showed poor correlation to LLS severity measured as the amount of pathogen sporulation on infected plants. Resistant host phenotypes were identified by limitation of P. brassicae sporulation, with or without the presence of a necrotic response (black flecking phenotype). Investigation of this pathosystem revealed significant differences between cultivars/lines, between isolates, and significant cultivar/line-by-isolate interactions. In total, 37 resistant and 16 moderately resistant interactions were identified from 144 cultivar/line-by-isolate interactions using statistical methods. Most of the resistant/moderately resistant interactions identified in this study appeared to be nonspecific towards the isolates tested. Our results suggested the presence of isolate-specific resistant interactions for some cultivars. Several sources of resistance have been identified that are valuable for oilseed rape breeding programmes.     

Pre-inoculation with Hyaloperonospora parasitica reduces incubation period and increases severity of disease caused by Albugo candida in a Brassica juncea variety resistant to downy mildew

Studies were undertaken to determine any interaction of an asymptomatic isolate of Hyaloperonospora parasitica (downy mildew) with a virulent isolate of Albugo candida (white rust) and Brassica juncea. White rust symptoms appeared 4 days earlier and were significantly more severe when a variety of B. juncea resistant to downy mildew but highly susceptible to white rust was first inoculated with A. candida followed 10 days later with H. parasitica. DNA extractions of tissues indicated H. parasitica had colonized the asymptomatic plants systemically. These are the first reports of (a) the systemic colonization by H. parasitica in a host resistant to downy mildew, and (b) the increase in susceptibility of a Brassica to white rust disease from asymptomatic colonization by H. parasitica.     

Leaf position,leaf age and plant age affect the expression of downy mildew resistance in <Emphasis Type="Italic">Brassica oleracea</Emphasis>

Downy mildew caused by the oomycete Hyaloperonospora parasitica (formerly Peronospora parasitica) is a worldwide foliar disease of Brassica vegetables, which may cause seedling loss in the nurseries and damage to adult plants in the field. Disease symptoms start from the lower leaves and progress upwards. Three experiments were conducted under controlled environment conditions, using inoculated leaf discs, to determine the influence of leaf position, plant age, and leaf age on the expression of resistance to downy mildew in various Brassica oleracea genotypes. The upper leaves were more resistant than the lower leaves when 7–19 week-old plants of broccoli and Tronchuda cabbage were tested. Broccoli lines ‘PCB21.32’ and ‘OL87123-2’ were fully susceptible at the cotyledon stage, showed a clear resistance increase from lower to upper leaves at 6 weeks and ‘PCB21.32’ was fully resistant 16 weeks after sowing. Immature leaves were more resistant than adjacent fully expanded mature leaves. Susceptibility increased with leaf age when the same leaf was tested at two to 4-week intervals. Leaf age and upper-leaf position on the stem had opposite effects on disease score, since younger leaves collected from lower positions and older leaves collected from upper positions tended to score similarly in compatible interactions. The progression of downy mildew from the base of the plant upwards on B. oleracea in the field could be due to differences in leaf resistance in addition to environmental variation. To maximise the expression of a compatible reaction in adult plants lower leaves of Brassica plants that are at least 12 weeks-old should be used.     

大麦白粉菌种群毒性监测及抗性材料鉴定

2005和2006年从我国冬大麦区采集和分离大麦白粉菌单胞菌株729个,利用Pallas近等基因系进行致病型鉴定和群体毒性频率分析.同时,利用分离得到的不同致病型菌株,通过抗谱分析的方法鉴定了328份大麦品种(系)的白粉病抗性和抗病基因.结果显示:大麦白粉菌群体对抗病基因Mlal Mla(A12)、Mla3、Mla6 Mla14、Mla7 Mla(No3)、Mla7 Ml(Lg2)、Mla9 Mlk、Mla9、Mlal3 MlaRu3、Mlpl、Mlg(Cp)和mlo5的毒性频率为0;对Mla12 MlaEm2、Mla7 Mlk、Mlat Mla8、Mla10MlaDu2和Mlk1的毒性频率很低,分别为0.1%、0.4%、0.9%、2.8%和4.2%.两年共鉴定出不同的致病型21个,致病型000、001和003在两个年度皆为优势致病型.所鉴定的328份材料绝大多数感病,仅37份抗病材料,能明确推导出抗白粉病基因的品种(品系)很少,这些品种(品系)含有的抗白粉病基因为Mr(Bw)Mla8、Mlg、Mira Mla8、Mla9 Mla1、Mla Mla(A12)和mlo5.     

Genetic diversity and pathotype determination of Colletotrichum sublineolum isolates causing anthracnose in sorghum

Amplified fragment length polymorphism (AFLP) based genetic diversity was analyzed for 232 Colletotrichum sublineolum isolates collected between 2002 and 2004 from three geographically distinct regions of Texas, and from Arkansas, Georgia, and Puerto Rico. Results revealed significant levels of polymorphism (59%) among the isolates. Even so, genetic similarity between isolates was high, ranging from 0.78 to 1.00. Clustering of similar isolates did not correlate with either geographic origin or year of collection. Pathotypes of 20 of the isolates were determined using 14 sorghum lines previously used in Brazil and the United States and 4 from Sudan. Seventeen new pathotypes were established from the 18 isolates that gave uniform and consistent reactions on all host differentials over 2?years of greenhouse testing. Differentials BTx378 and QL3 were resistant to all isolates while BTx623 and TAM428 were universally susceptible both years. Each of these lines had shown differential responses in prior studies indicating that the pathogen population has sufficient diversity to adapt rapidly to changes in resistant host lines deployed. When the 2-step pathotype classification scheme was used, the 18 isolates examined in this study were placed in four pathotype groups (A, C, D and G), which would further then be separated into ten distinct pathotypes. Common sets of differentials and a standardized nomenclature will allow for comparison to be made among pathotypes of C. sublineolum detected from different regions and also could help direct planting of appropriate sorghum lines and aid in the development of more durable forms of resistance.     

Potential loss of clubroot resistance genes from donor parent Brassica rapa subsp. rapifera (ECD 04) during doubled haploid production

Clubroot resistance derived from the oilseed rape/canola Brassica napus ‘Mendel’ has been overcome in some fields in Alberta, Canada, by the emergence of ‘new’ strains of the protist Plasmodiophora brassicae. Resistance to the pathogen was assessed in 112 doubled haploid (DH) lines, derived from B. rapa subsp. rapifera (European clubroot differential (ECD) 04). The lines were evaluated against five single‐spore isolates representing the ‘old’ pathotypes 2, 3, 5, 6 and 8, and 15 field populations representing new strains of P. brassicae. The disease severity index (ID%) data revealed that none of the DH lines were resistant or moderately resistant to the new pathotype 5X (field populations L‐G1, L‐G2, L‐G3) and D‐G3, while 3–42% were resistant or moderately resistant to the other 11 new strains. Using the mean ID induced by the old pathotype 3 (approx. 13.5%) as the baseline, clubroot severity increased by 300–600% when inoculated with the new pathotypes. A significant finding of this study was the fact that ECD 04 showed absolute resistance to all of the old and new P. brassicae strains while the B. napus ‘Mendel’, although resistant to all of the old pathotypes, was resistant to only about 50% of the new strains. Similarly, all of the selected clubroot‐resistant commercial canola cultivars evaluated in this study were susceptible to 87% of the new P. brassicae strains. The molecular data revealed that the breakdown of clubroot resistance in Mendel and the canola cultivars was in part due to the non‐inheritance of the Crr1 gene on the A08 chromosome from ECD 04.     

Development of a Pathotype Specific SCAR Marker in Plasmodiophora brassicae

Plasmodiophora brassicae is an obligate biotroph that causes clubroot, one of the most damaging diseases of crucifers. Breeding of clubroot-resistant plants has been hampered by the large variation of pathogenicity in P. brassicae and by the lack of an efficient means for detecting specific isolates. To improve the practicality of P. brassicae pathotype-identification, a molecular approach was developed. RAPD profiles of 37 single-spore-derived isolates belonging to seven different pathotypes were compared. A RAPD marker, OPL14₁₂₀₀, was found in the molecular pattern of all the isolates belonging to one particular pathotype (P1), pathogenic on all differential hosts tested. The DNA band corresponding to this marker was cloned and sequenced. No significant homology to previously characterised nucleotide sequences was found. Primers were designed to specifically amplify the OPL14₁₂₀₀ band. The SCAR marker was observed in all isolates belonging to pathotype P1 and was absent in isolates belonging to other pathotypes and in the different plant hosts analysed. The SCAR marker was also generated from direct amplification of DNA from clubs (mixture of host and pathogen DNA) developed after infection by P1 isolates. This molecular marker may be a valuable tool for rapid and reliable identification of P. brassicae P1 isolates in areas where resistant varieties are cultivated.     

Evidence that a Leaf-Disk Test Allows Assessment of Isolate-Specific Resistance in Brassica oleracea Crops Against Downy Mildew (Peronospora parasitica)

A rapid resistance/susceptibility test for Peronospora parasitica (downy mildew) was established by inoculating leaf-disks of four Brassica oleracea accessions. Several conditions were tested: disk disinfection or not, agar medium with or without nutrients and with 50 or 100 ppm of benzimidazole. Using disinfected disks placed on agar (no nutrient and benzimidazole at 50 or 100 ppm), the responses of leaf-disks to four isolates were similar to those obtained using the classical cotyledon test, whereas undesired contaminations occurred in all other conditions. The possible effect of the particular leaf used for obtaining the disks was also studied. In each incompatible interaction tested, disks were resistant whatever the leaf used. In compatible interactions, susceptible phenotypes were observed on disks derived from the six lowest leaves, but disks from upper leaves were resistant. The genetic basis of resistance in a F1 hybrid broccoli was assessed, by testing six isolates on an F2 population derived from this hybrid. The cotyledon test only allows inoculation of two isolates per seedling, whereas many isolates can be tested on each plant by using leaf-disks. The segregation of the resistance to each of the six isolates was analysed: two dominant genes (tightly linked) control resistance to all isolates (one to five isolates; the other to only one isolate).     

弱光胁迫下黄瓜霜霉病抗性评价与分析

为明确弱光胁迫下黄瓜霜霉病田间发病规律及遗传特性,筛选抗霜霉病黄瓜品种,以15份黄瓜自交系为试材,在弱光条件下通过子叶接菌诱导寄主植株发病,同时结合田间发病率及病情指数调查进行复合抗性鉴定,进而筛选抗病组合,并对其分离世代进行抗性鉴定与遗传特征分析。结果表明,供试15份材料中共筛选出4个典型品系HB1、HB2、HB3和HB4,其病情指数分别是14.17、28.71、63.33和78.33,分别属于高抗、抗病、感病和高感病类型。这4个亲本的F1代及分离世代群体中霜霉病抗性与亲本抗性均存在正相关关系,抗性亲本的后代表现出较强的抗性;F2代群体病株分离现象比较明显,呈偏态分布,有明显的主基因+多基因存在特征,表明弱光胁迫下黄瓜霜霉病受主基因+多基因控制,主基因效应值较大。经田间抗病性鉴定分析,初步筛选出组合HB12、HB13和HB21为抗霜霉病组合,可用于后续抗病品种的选育。     

Development of simple sequence repeat markers for the classification of the clubroot pathogen <Emphasis Type="Italic">Plasmodiophora brassicae</Emphasis>

Clubroot disease caused by Plasmodiophora brassicae is one of the most serious diseases in cruciferous crops. To classify isolates, we developed simple sequence repeat (SSR) markers for P. brassicae. Twenty-four Japanese isolates were used in this study: 12 isolates of an unknown pathotype from the Kyoto Prefecture, as well as 12 isolates of known pathotypes, including three single-spore lines. From the 12 isolates from Kyoto Prefecture, 11 were classified into either pathotype 2 (three isolates) or 4 (eight isolates). We designed 23 SSR markers based on the P. brassicae genome, of which 11 markers from intergenic regions showed polymorphisms in the 24 isolates. Many haploid isolates belonging to pathotypes 2 and 4 were monomorphic, and typical alleles were detected in some isolates not belonging to pathotype 4. Two bands were detected for eight SSR loci in five isolates, indicating that different genotypes were mixed in these isolates. We constructed a phylogram based on the 11 polymorphic SSRs. Pathotypes 2 and 4 formed a cluster, from which pathotypes 3 and 1 were successively placed. These results strongly suggest a close genetic relationship between isolates in pathotypes 2 and 4, consistent with our finding that isolates in these two pathotypes were found at one collection site. In combination with pathotype classification and other marker systems, the SSR markers can be used for more detailed analyses to improve the control of clubroot disease.     

Identification and characterization of pathotypes in <Emphasis Type="Italic">Puccinia horiana</Emphasis>, a rust pathogen of <Emphasis Type="Italic">Chrysanthemum</Emphasis> x <Emphasis Type="Italic">morifolium</Emphasis>

Puccinia horiana is the causal agent of chrysanthemum white rust or Japanese rust. This microcyclic autoecious rust has a quarantine status and can cause major damage in the commercial production of Chrysanthemum x morifolium. Given the international and often trans-continental production of planting material and cut flowers of chrysanthemum and the decreasing availability of registered fungicides in specific regions, breeding for resistance against P. horiana will gain importance and will need to involve the appropriate resistance genes for the pathotypes that may be present. As pathotypes have not been well characterized in this system, the main objective was to build an international collection of isolates and screen these on a large collection of cultivars to identify different pathotypes. Using a robust and high throughput bioassay, we tested 36 selected cultivars with 22 individual single-pustule isolates of P. horiana. The isolates originated from three different continents over 4 different collection years and included some isolates from cultivars previously reported as resistant. In most cases the bioassays resulted in a clear scoring of interaction phenotypes as susceptible or resistant, while in several cases consistent intermediate phenotypes were found, often on specific cultivars. Twenty-four of the cultivars gave a differential interaction phenotype profile. All isolates produced a unique profile, infecting a minimum of 4 and a maximum of 19 differential cultivars. Based on the Person analysis of these profiles, this pathosystem contains at least seven resistance genes (and seven avirulence genes), demonstrating the highly complex race structure in this pathosystem.     

Application timing of herbicides,glyphosate and atrazine,sway respective epidemics of foliar pathogens in herbicide-tolerant rapeseed

Rapeseed (Brassica napus) production in Australia relies heavily on triazine-or glyphosate-tolerant cultivars. For 14 triazine-tolerant cultivars, disease development of Neopseudocercosporella capsellae (white leaf spot), Alternaria brassicae and A. japonica (Alternaria leaf spot), and Hyaloperonospora brassicae (downy mildew) were all dependent upon herbicide application timing (p < 0.001), with significant differences between cultivars (p < 0.001) and a significant interaction (p < 0.001) between herbicide application timing and cultivars. Atrazine applied preinfection by N. capsellae, A. brassicae, or A. japonica enhanced disease incidence, severity, and leaf collapse, while atrazine application postinfection for these same pathogens reduced all three disease parameters. However, for H. brassicae, application of atrazine after, and especially prior to, infection resulted in lower disease incidence, severity, and leaf collapse. Application of glyphosate on five glyphosate-tolerant cultivars for N. capsellae resulted in significant differences (p < 0.05) between glyphosate application treatments, and between host cultivars in terms of incidence and consequent leaf collapse. For A. brassicae, A. japonica, and H. brassicae, glyphosate resulted in significant differences (p < 0.001) across application timings between cultivars, and a significant interaction (p < 0.001) between herbicide application timings and cultivars. Glyphosate applied on glyphosate-resistant rapeseed after, and especially prior to, attack by H. brassicae, reduced downy mildew. These are the first studies to highlight how the timing of application of triazine or glyphosate in relation to pathogen infection is critical to the susceptibility of rapeseed to white leaf spot, Alternaria leaf spot, and downy mildew. This new understanding offers fresh possibilities for improved management of these diseases in herbicide-tolerant rapeseed crops.     

Postulation of virulence groups and resistance factors in the quinoa/downy mildew pathosystem using material from Ecuador

Twenty downy mildew isolates were collected in south, central and north Ecuador and inoculated on seedlings of 60 quinoa lines. A scale for scoring quinoa downy mildew infections was developed. Four virulence groups and three resistance factors were identified. In southern Ecuador only isolates of virulence group 2 were collected, while in the central region only virulence group 4 was found. In the north of Ecuador isolates of all four virulence groups were collected. Resistance factor R3 was found most frequently in seedlings of 13 high-yielding Ecuadorian quinoa lines. No effective resistance against group 4, the most virulent group, was observed. Lines ECU-288 (susceptible), ECU-291(R1), ECU-470 (R2) and ECU-379 (R3) could be used as a preliminary quinoa differential set for identifying downy mildew virulence groups.     

High diversity, low spatial structure and rapid pathotype evolution in Moroccan populations of Blumeria graminis f.sp. hordei

Limited information is available about the spatial distribution and evolution of Blumeria graminis f.sp. hordei populations in North African countries, such as Morocco. Frequencies of virulence alleles in B. graminis populations are mainly driven by selection exerted by host resistance genes in addition to neutral processes such as migration and genetic drift. In Morocco, in contrast to Europe, there has been no systematic deployment of resistant cultivars, although some R genes are present in the traditional varieties. This is expected to result in the evolution of pathotypes with virulence to different R genes, and higher diversity in Morocco compared to Europe. To test this, we used 24 differential cultivars to characterise 72 isolates from Morocco in 2009. We assessed diversity and spatial structure of pathotypes and compared them to past isolates from the same area (collected in 1992). There was a high diversity of pathotypes. Isolates from 2009 were distinct from isolates from 1992, due to loss of virulence to Mla12, increased virulence to Mla8, Mla3 and Mlk1, and decreased virulence to Mla6, Ml(Ru2), Mlg and MlLa. Many virulences were different from those observed in European and Asian populations of B. graminis. At the spatial scale investigated, airborne dispersal and a lack of strong selection in the host population likely prevented the formation of population structure and allowed the accumulation of high isolate diversity. The evolution of novel and distinct pathotypes since 1992 is likely attributable to gene flow from Europe and selection by the host population in Morocco.     

<Emphasis Type="Italic">Alternaria</Emphasis> species associated with early blight epidemics on tomato and other <Emphasis Type="Italic">Solanaceae</Emphasis> crops in northwestern Algeria

Clubroot, caused by the protozoan parasite Plasmodiophora brassicae Woronin, is one of the most damaging diseases of Brassica napus worldwide. Resistant plant material is valuable for cultivation in all areas of high incidence of the disease and intensive growth of oilseed rape. We have evaluated clubroot resistance, plant morphology and seed quality in 15 lines of an F₄ generation and selected six lines of F₅ generation of interspecific hybrids obtained from a cross between a male sterile line of B. napus ‘MS8’, selected from resynthesized oilseed rape (B. rapa ssp. chinensis × B. oleracea var. gemmifera) and an ecotype of B. rapa ssp. pekinensis. Clubroot resistance was evaluated using a bioassay with P₁-P₅ pathotypes of P. brassicae (according to the classification of Somé et al. 1996). The resistance to the pathotype P₁ was successfully fixed in the F₅ generation, and improved in some lines in respect to the pathotypes P₂-P₄. The resistance to P₁ and the other tested pathotypes was not linked. Characterization of plant material included recent techniques of FISH and BAC-FISH with a special focus on the analysis of ribosomal DNA (rDNA) of selected individuals. Two hybrid lines combined high levels of resistance with appropriate plant morphology, good seed quality traits and a stable chromosome number and arrangement. Recent techniques of ‘chromosome painting’ provided good insight into chromosome organization in the hybrids obtained, and offered opportunities of further improvement of the breeding process.