A comparison of several procedures for mass selection in winter rye I. The relative quality of the procedures

Summary The HS-family offspring from each of 463 plants occurring in a population of winter rye were grown in a randomized complete block design. According to 4 sets of requirements, 4 groups of HS-families were created. The HS-families belonging to a certain group were considered to be superior with regard to the specified requirements.Independently from this, selection among the 463 parental plants was simulated. The selection was according to 3 methods (truncation selection, grid selection and honeycomb selection) applied with regard to a single plant trait or with regard to two plant traits. Altogether 9 different single-trait and two-trait criteria were studied for each selection method.The quality of some selection procedure or the other, i.e. a combination of a selection method and a selection criterion, was measured on the basis of the frequency of plants giving rise to a superior HS-family among all plants selected by the procedure.It is concluded that grid selection and honeycomb selection are more effective than truncation selection. Further it is tentatively concluded that honeycomb selection is more reliable than grid selection.     

Comparison of some selection procedures and objectives in faba beans (Vicia faba L.). I. direct and index selection for seed yield

Summary Starting with two heterogeneous F₂ populations, each based on 20 cross combinations, different selection procedures were applied for four consecutive selection cycles. Three of the selection procedures involved seed yield per plant (SYP): (i) direct selection for SYP (DSY); (ii) indexselection for SYP (ISY) with plant length, the ratio of the vegetative top to plant length, end of grain filling and duration of the generative stage as auxiliary characters and finally; (iii) independent culling levels selection (ICL) for the index described above and crude protein content. For ICL-selection the attention is focussed on SYP in this paper.For all three selection procedures, predicted and realized responses were calculated and expressed as percentage of a corresponding non-selected population. The intensities of selection differed over selection methods and generations, mostly due to practical constraints.As far as predicted responses are concerned, ISY-selection seemed to be slightly superior to DSY-selection and DSY-selection to ICL-selection. This order may partly be due to differences in selection intensity. However, none of the predictions was very accurate, but the predictions of ICL-selection seemed to be the most accurate. This has been ascribed also to the relative mild selection intensity applied in ICL-selection. It is concluded that a decision in favour of a complicated selection procedure like index selection based on predicted responses only cannot be defended. As far as realized responses are concerned, DSY-selection seems to be slightly superior to the other two selection procedures, as it is the only procedure that resulted in a more or less stable positive response to selection.The auxiliary characters, especially plant length, showed a marked correlated response to all three selection procedures. In case of direct selection for SYP this seemed paradoxical with the inefficiency of index selection, but, it may reflect the differences in the genuine genotypic correlations and the estimated genotypic correlations.     

轮回选择在烤烟品种改良中的应用探讨

笔者在国外学者研究文献的基础上,归纳了轮回选择在烤烟品种改良中的应用价值,并结合烤烟作物自身特点,分析了烤烟育种应用轮回选择的优势,最后结合育种实践经验,指出创建烤烟轮回选择基础群体应注意亲本的选配、亲本的数目及基础群体的合成方式,提出多目标烤烟育种采用改良混合选择法结合S1选择法的轮回选择程序,同时建议采用开放式的轮回选择方案、适时引入适当遗传比率的优异种质或基因,根据基础群体所包含的种质状况、选择性状的遗传模型及遗传复杂性确定轮回选择后代种植群体规模,依据轮回选择群体的规模、轮回选择实际进程和目标性状遗传方式确定对后代的选择强度,采用约束指数对多个目标性状同时进行选择。     

甘蓝型黄籽油菜分子标记辅助选择的效果分析

应用分子标记辅助选择的方法,将黄籽性状导入到波里马恢复系中,利用杂种优势,将是提高油菜产量的理想途径。分析了分子标记辅助选择甘蓝型黄籽油菜的前景和背景选择的效果,结果表明,在背景选择中,7种不同 RAPD引物数目组合方式的选择结果基本一致;应用少数连锁群上的标记可以获得与全基因组相似的选择结果。在前景选择中,随着世代的增加,每一个标记的选择准确率在降低;双侧标记的选择准确率比单侧的标记高,此外,多个单侧标记未能提高选择准确率。据此,提出了作物前景和背景选择过程中的一些改进策略。     

植物基因组选择及其应用研究进展

为促进基因组选择在植物遗传改良中的应用,笔者总结了基因组选择的原理与方法、分析了基因组选择育种的统计方法,指出了各种因素对基因组选择的影响,总结了基因组选择面临的挑战,并讨论了基因组选择在植物数量性状分子育种研究中可能的应用。认为随着基因型分析成本的降低和统计方法的发展,植物基因组选择将会逐步完善,将在植物基因组育种中发挥重要的作用。     

Comparison of some selection procedures and objectives in faba beans (Vicia faba L.). II. Selection for crude protein content

Summary Starting with two heterogeneous F₂ populations, each based on 20 cross combinations, different types of selection were applied for four consecutive selection cycles. Three of the selection procedures involved crude protein content (CP) and are presented in this paper. They were selection for high CP (HP), selection for low CP (LP) and independent culling levels selection for high CP and an index for seed yield per plant (ICL). For ICL-selection the attention is focussed on CP in this paper.For all three selection procedures, predicted and realized responses were calculated and expressed as percentage of a corresponding random population. The selection intensities (i) differed over selection procedures and generations. Differences in i between HP and LP within generations were mostly of minor interest. The response to HP-selection was slightly higher than to ICL-selection, but this may be due to the higher selection intensity exerted with the former method.HP-and LP-selection showed some remarkable differences, which were interpreted as a tendency towards partial dominance of high over low protein content. The total response to HP-selection gradually increased, whereas LP-selection yielded the total response largely after only one cycle of selection. The predicted response showed a tendency towards overestimation in the case of HP-selection and to underestimation in the case of LP-selection.Selection for high protein yield through CP seems to be feasible, although improvement of yield stability may eventually be more necessary. As no consistent correlation, either positive or negative, between SYP and CP could be detected, selection for either of these characters may be considerd independently of selection for the other one.     

Subset selection in plant breeding practive

Summary Selection decisions in variety testing should partly be based on statistical motives. Useful tools for this are subset selection procedures. These procedures can also be used when the performed experiment has an incomplete block design or when a series of regional trials is studied. Various selection rules serve different selection goals, but they all need so-called selection constants. Often, these constants have to be approximated by computer simulation. For this simulation, and also for the execution of the selection rules, software has been developed and is available. Some practical adjustments and modifications of subset selection in plant breeding practice are proposed. Finally, a case study of selection in sugar beet is presented.     

Selection indices for sugarcane improvement at three stages of selection

Summary Selection indices at different stages of selection were estimated for a biparental mating population of sugarcane (Saccharum officinarum L.). At the seedling stage indices constructed from primary characters are better than selection for yield alone. At the clonal stage the superiority of index selection over direct selection was marginal. In the seedling stage, selection based on index can lead to better selection efficiency in succeeding clonal stages. This was confirmed by a sample study.     

Early Generation Selection for Grain Yield in Narrow-Leaf Lupin (Lupinus angustifolius L.)

Experiments were undertaken to identify an efficient method of selection for yield in early segregating generations of narrow-leaf lupin crosses. A first series of experiments involved simulation of F₂ populations with mixtures of ten cultivars and advanced breeding lines. The performance of genotypes in mixtures sown at different densities was compared with their monoculture [commercial density) yields m the same and the following year. These comparisons provided a basis for assessing the value of different planting designs and different selection criteria in early generation selection for yield. Correlated monoculture yield responses to simulated selection for single plant yield were similar for the honeycomb design and standard selection procedures at both low and commercial densities. These responses were much higher than that for grid selection in a low density population. Correlated monoculture yield responses to selection for other plant characters were substantial only for flowering time and number of pod bearing branches under certain conditions. These responses were greatest for selection in a low density mixture and in the year following selection. A procedure involving selection of the earliest flowering plants and selection within this group of plants with the highest number of pod bearing branches should be an effective approach to early generation yield selection in the narrow-leaf lupin.     

Methods of increasing short term response to full-sib family recurrent selection in small populations

Accelerated recurrent selection (ARS), in which selection is carried out on the predicted value of the progeny rather than on the observed performance of the parents, has been proposed as a method of increasing response to selection and of reducing cycle time. ARS schemes based on test cross evaluation of full-sib families have been compared by stochastic computer simulation. The difference in genetic and economic time scales is emphasised, with the economic long term (21 years) being only 21 or fewer cycles of selection. ARS schemes are shown frequently to offer improvements over standard recurrent selection methods under these circumstances, since they allow more cycles of selection in a given time frame. Schemes with very low effective population sizes often give the greatest response to selection over the time scales considered here. It is suggested that evaluation of cumulative responses to selection over defined periods of time, either by Monte Carlo simulation or by stochastic theory, is the best method of ranking alternative selection schemes. Evaluating response to selection by deterministic methods, or by attempting to take drift into account by evaluating schemes with identical effective population sizes can be misleading. This revised version was published online in August 2006 with corrections to the Cover Date.     

太谷核不育小麦应用研究—两种轮回选择方案对小麦群体改良的效应

以显性雄性不育小麦为材料,采用改良半姊妹和混合轮回选择两种方案,对同一基础群体C_0进行了四轮选择.结果表明,对主穗粒数、单株粒重和百粒重等主要产量性状,两种方案均有较显著的改良效果.遗传进展比较,改良半姊妹方案所取得的进展较大,但两方案间差异未达到显著水准.对降低群体植株高度,用改良半姊妹方案的效果极显著,而混合轮选较差.同一方案逐轮间各性状的增进值较小,呈波浪式进展趋势.群体变异程度比较表明,两种方案逐轮群体的变异系数皆呈下降趋势,改良半姊妹方案的下降幅度略大于混合轮选.     

Sporophytic and gametophytic recurrent selection for improvement of partial resistance to Alternaria leaf blight in sunflower (Helianthus annuus L.)

Alternaria leaf blight, caused by Alternaria helianthi Hanf., is one of the most important diseases of sunflower causing significant yield losses in several tropical countries. Yet, so far, only partial resistance for the disease has been discovered in the germplasm through conventional sporophytic selection. Therefore, the main objective of the present investigation was to compare sporophytic and gametophytic recurrent selection with the aim to enhance the level of resistance to Alternaria leaf blight. The base population was synthesized by random mating three populations- two interspecific derivatives involving different species of Helianthus and one germplasm accession based on their partial resistance to disease incidence. The base population was subjected to 1-2 cycles of both sporophytic and gametophytic selection. The gametophytic selection was practiced by applying pathogen culture filtrate to the stigma and style one hour before pollination. The selection response was measured by scoring the percent disease index at flowering, 15 days after flowering, and at physiological maturity and by quantifying economic yield gain. A significant reduction in mean per cent disease index values and a gain in seed yield were observed for both the types of selection cycles, but more so for gametophytic selection. The populations improved through gametophytic selection appear to be more promising as the pollen selection allowed the selection of rare favorable allelic combinations that would hardly be detected at the sporophytic level. A combination of gametophytic selection and conventional sporophytic selection should be considered as an effective tool in population improvement programs to achieve higher levels of resistance in relatively short time.     

Maize participatory breeding in Portugal: Comparison of farmer's and breeder's on‐farm selection

“VASO” is a Portuguese participatory maize breeding project (1984), where several maize landraces such as “Pigarro” have been selected both by a farmer's (phenotypic recurrent selection) and a breeder's approach (S2 lines recurrent selection). The objectives of this study were to determine the phenotypic and genotypic responses to participatory selection using these two different approaches, to clarify to which extent both selection methods preserve genetic diversity, and conclude what is the preferred method to apply in sustainable farming systems. The results, obtained via ANOVA, regression analyses and molecular markers, indicate that for both selection methods, genetic diversity was not significantly reduced, even with the most intensive breeder's selection. Although there were some common outputs, such as the determinated versus indeterminated ears, cob and ear weight ratio per ear and rachis 2, specific phenotypic traits evolved in opposite directions between the two selection approaches. Yield increase was only detected during farmer selection, indicating its interest on PPB. Candidate genes were identified for a few of the traits under selection as potential functional markers in participatory plant breeding.     

Three-Way and Four-Way Recurrent Selection in Plant Breeding

Three or four-way recurrent selection is proposed for the development of three or four-way crosses. In term of genetic effects, it could be justified if there are interactions between more than three genes, whether alleles or not, if autopolyploids are also considered. For autotetraploids, in particular with tetragenic interaction, four-way recurrent selection could be more effective than reciprocal recurrent selection (two-way selection). According to the types of progenies used to develop the tests, different selection procedures are considered, the two extremes being called method 1 and method 3. With method 1 (selection for three or four-way general combining ability) a plant from a population is used to produce three-way or four-way progenies with the other populations used as testers. With method 3 (selection for three or four-way specific combining ability) three-way or four-way crosses are developed with one plant from each population. To study the genetic advance, the theory is developed to consider either diploidy or autotetraploidy. It is shown that method 3 will allow a greater genetic advance than method 1 for low heritability and low selection intensity. The way towards hybrid development with three and four-way pedigree selection is discussed: again selection can be for general or specific three or four-way combining ability. It is emphasized that an advantage of recurrent selection for three or four-way specific combining ability is that it allows direct varietal development with pedigree selection on three or four-way specific combining ability. Some other practical aspects are also considered.     

Grain-yield characteristics of oat lines surviving uniform and shuttle selection strategies

Summary Four selection strategies were used on four sets of oat lines to select for grain yield. Two of these used uniform environments whereby sequential selection of the high-yielding lines occurred in continuous high- or continuous low-productivity environments. These are referred to as high and low uniform selection strategies, respectively. The other two selection strategies were conducted by sequential selection of the high-yielding lines in alternating high- and low-productivity environments. They are referred to as high and low shuttle selection strategies, respectively, with high and low designating the productivity of the first environment in the sequence. After three or four cycles of selection, the surviving lines and a random sample from each set were evaluated for mean grain yield, grain yield response to improving environments, and stability of grain yield, in a range of environments typical of oat production on Iowa farms.Grain yield and regression response for all selection strategies, when calculated across all sets of lines, were significantly greater than corresponding values for random samples. Stability was unchanged. The uniform-high and uniform-low strategies gave the greatest and the smallest gains in mean grain yield, respectively, with the shuttle strategies giving intermediate gains. Shuttle selection in predominantly high-productivity environments increased grain yield more than shuttle selection in predominantly low-productivity environments. The uniform-strategy followed by the shuttle-high strategy identified entries with superior performance in high productivity environments. Increased gain in mean grain yield across all environments was associated with increased number of selection cycles conducted in high-productivity environments.Journal Paper No. J-15252 of the Iowa Agric. and Home Econ. Exp. Stn., Ames, Iowa 50011, USA. Project No. 2447.     

Accelerated recurrent selection

In Accelerated Recurrent Selection (ARS) schemes, selection is based on the predicted performance of progeny families, estimated as the average of the parental families. These schemes can halve cycle time compared to simple recurrent selection methods. They also have a lower requirement for evaluation of families in yield trials, although they do require more seed production. ARS therefore provides options in cycle time, effective population size, response to selection and cost which have not been available before. Example schemes are compared by computer simulation with truncation selection and with optimal family selection, where contributions of families to the next generation are optimised to give the maximum response to selection at a specified effective population size. In many circumstances, ARS schemes compare favourably. Difficulties in combining estimates of selection intensity and of effective population size when comparing the merits of different breeding schemes are discussed. It is suggested that unless one is interested in response to selection over periods greater than 50 years, the weight given to effective population size in ranking different schemes should be small.     

小麦轮回选择的初步实践

利用太谷核不育小麦,开展以抗锈和矮秆丰产为主要目标的轮回选择,选择压分别为5.6%和4.7%.抗锈群通过一轮混合选择,条锈病反应型0—1级的抗病株率和严重度25%以下的轻病株率较基础群体分别提高12.5%和5.1%.矮秆丰产群采用两种轮选方案.经两轮选择看出,改良半姐妹法其群体的株高比基础群体明显降低6.2厘米,其余性状有向选择目标集中的趋势;混合选择法其群体除穗粒数外,其余性状进展趋势与上相同.     

Computer simulation of a selection strategy to accommodate genotype environment interactions in a wheat recurrent selection programme

Multi-environment trials (METs) are used in plant breeding programmes to evaluate genotypes (lines/families) as a basis for selection on expected performance (yield and/or quality) in a target population of environments (TPE). When a large component of the genotype environment (G × E) interactions results from crossover interactions, samples of environments in METs that deviate from the TPE provide a suboptimal basis for selection of genotypes on performance expected in the TPE. To adjust for the negative effects of these deviations, a selection strategy that weights the data from the MET according to their expected frequency of occurrence in the TPE (i.e. a weighted selection strategy) was investigated. Computer simulation methodology was used to obtain preliminary information on the weighted selection strategy and compare it to the traditional unweighted selection strategy for a range of MET scenarios and G × E interaction models. The evaluation of the weighted selection strategy was conducted in context with the germplasm enhancement programme (GEP) of the Northern Wheat Improvement Programme in Australia. The results indicated that when the environments sampled in the MET matched those expected in the TPE, the unweighted and weighted selection strategies achieved a similar response to selection in the TPE. However, when the environments sampled in the MET did not match the expectations in the TPE and a large component of the G × E interactions resulted from crossover interactions, the weighted selection strategy achieved a greater response to selection in the TPE. The advantage of the weighted strategy increased as the amount of crossover G × E interaction increased or fewer environments were sampled in the METs.     

Optimising potato breeding. II. A model for optimising single-stage and single-trait selection

Summary A model for optimising single-stage and single-trait selection is presented. The model is based on the expected selection response model, extended with parameters describing the nature of the environment and with variables allowing a manipulation of selection schemes. As an example, the model is used to optimize tuber yield selection in potato breeding.Estimated parameter values have an uncertainty, which may bias the model outcome. Sensitivity analysis shows that the sensitivity to unrealistic parameter values for optimal allocation is less than the sensitivity for the selection response.     

Geneticanalysis of drought stress response in rapeseed (Brassica campestris and B. Napus). II. Yield improvement and the application of selection indices

Summary The expected improvement in grain yield if selection was made for plant characters measured between flowering and maturity was evaluated in populations of rapeseed (Brassica campestris and B. napus) grown in a droughted environment. Drought was commenced at flowering in each species and measurements were made on plants at the commencement of the drought stress, during the stress treatment and at crop maturity.Substantial genetic and phenotypic variation was observed in yield as well as the different morphophysiological determinants of yield. In B. campestris no single parameter was found to be a suitable alternative selection criterion to yield since the correlated responses in yield if selection was for another character was lower than if selection was for yield alone. By the use of a selection index however, joint selection for yield, as well as harvest index, 1000 seed weight and seeds per pod, was expected to be 20% more effective than direct selection for yield under drought. In the B. napus population direct selection for flowering time or for harvest index was predicted to result in a genetic advance in yield equal to or greater than that obtained by direct selection for yield, whereas joint selection for flowering time and yield should result in a 16% greater yield increase. Selection for increased yield in these populations grown in droughted conditions is discussed.