Differences in growth and herbicide sensitivity among Cyperus esculentus clones found in Belgian maize fields

Cyperus esculentus is an invasive troublesome neophyte in many arable crops in Belgium. Applied weed control varies from field to field. One of the possible reasons for this variability might be a differential vegetative and reproductive behaviour among Belgian C. esculentus clones. In this study, growth characteristics and herbicide sensitivity of C. esculentus clones collected in Belgian maize (Zea mays) fields were evaluated. In a morphology Experiment, 25 clones were screened for growth characteristics and ability to set viable seeds under outdoor conditions. Dose – response experiments were conducted in the glasshouse to evaluate the effectiveness of two foliar‐applied herbicides (bentazon and glyphosate) and two pre‐sowing soil‐incorporated herbicides (S‐metolachlor and dimethenamid‐P) for controlling 14 C. esculentus clones. Response variables were aboveground dry biomass, tuber number, tuber dry biomass and individual tuber dry weight. Clones exhibited large differences in shoot number (up to 3.1‐fold), tuber dry biomass (up to 4.7‐fold), tuber number (up to 3.4‐fold), individual tuber dry weight (up to 4.8‐fold), inflorescence number and capacity to set viable seeds. Large interclonal differences in herbicide sensitivity (up to 8.3‐ and 4.0‐fold for aboveground dry biomass and tuber dry biomass, respectively) were observed. Contrary to foliar‐applied herbicides, soil‐incorporated herbicides were very effective and provided season‐long C. esculentus control at doses below the recommended maximum field dose. However, low doses stimulated tuber formation. Future C. esculentus management strategies should take into account differential growth characteristics and herbicide sensitivity of C. esculentus clones.     

Genetic differentiation and host preference reveal non‐exclusive host races in the generalist parasitic weed Phelipanche ramosa

We developed 20 microsatellite markers to genotype over 100 populations of the parasitic weed Phelipanche ramosa, which covers a wide host crop and geographic range. A representative core collection of 15 populations was also used in cross‐infestation assays to study host preference during germination, attachment and shoot formation. We observed low genetic differentiation within most of the populations, but high genetic differentiation between populations partitioned into 3 genetic groups with different host preferences and geographic distributions. Genetic group 1 is detected exclusively in western France and on various host crops, notably winter oilseed rape (WOSR) and not hemp. Cross‐infection assays confirmed its incompatibility with hemp and showed its preference for WOSR and tobacco in terms of germination and attachment success. The group 2 populations share a large geographic distribution in France and Europe, low germination success with WOSR and high germination success, attachment success and shoot formation with hemp, tobacco or tomato. The subclades 2a and 2b include most of the French populations in hemp crops in eastern France and in tobacco fields in several European countries respectively. The genetic analyses revealed the potential of the three groups to increase their geographic range in the future. Intermediate genetic groups showed higher intrapopulation diversity and represent potential stocks for new host race emergence. Those findings argue in favour of the existence of host races in P. ramosa and should be considered for appropriate management strategies, notably in breeding programmes for resistance against this parasitic weed.     

Genetic diversity of the declining arable plant Centaurea cyanus: population fragmentation within an agricultural landscape is not associated with enhanced spatial genetic structure

Agricultural intensification has recently resulted in the decrease in frequency and abundance of arable weed species. This includes the previously widespread Centaurea cyanus, whose populations are now fragmented and infrequent in western Europe. The consequences of habitat modification and fragmentation in terms of genetic diversity of the remaining populations have not yet been addressed. We used ten microsatellite markers to assess the genetic diversity and genetic structure of populations contained in an agricultural landscape in north‐eastern France. The ten microsatellites were all highly polymorphic. Centaurea cyanus appears to be a genetically variable species, with high levels of genetic diversity within each cultivated field. Genetic structure was investigated using a Bayesian method. The partitioning of the genetic variation into three clusters was not associated with sampling locations, and most individuals were admixed. These results suggest that the cornflower populations investigated may have multiple origins in the past and that genetic variation has been reshuffled by human transportation of seeds. Thus, anthropogenic dispersal associated with farming activities is probably a major factor driving the structure of genetic diversity in arable land plants. Despite low levels of genetic differentiation between populations, fine‐scale spatial genetic structure was observed within populations, suggesting limited local dispersal. We conclude that in areas where C. cyanus has become rare, the recent fragmentation of populations may in the future cause a loss of genetic diversity and even extinction.     

Crop rotation effects on Cyperus rotundus and C. esculentus population dynamics in southern California vegetable production

Control options for Cyperus rotundus and Cyperus esculentus (purple and yellow nutsedge) were evaluated within three cropping systems in the low desert of southern California: (1) standard vegetable crop rotation (weed‐free, uncontrolled nutsedge and cultivation) with spring cantaloupe (Cucumis melo) – summer fallow – winter broccoli (Brassica oleracea), (2) cover crop rotation (halosulfuron and smother crop) with spring wheat (Triticum aestivum)/corn (Zea mays) – summer sudangrass (Sorghum sudanense) – Winter Fallow, (3) rotation with solarization (non‐solarization and solarization) with spring wheat – summer fallow/solarization – winter broccoli. After two growing seasons, broccoli was planted without Cyperus control, to study the effect on yield. Cyperus rotundus tubers increased from 0.66 tubers per m² to 1260 tubers per m² in the uncontrolled treatment over two seasons. Cultivation during the growing season reduced C. rotundus tubers by 93% compared with the uncontrolled plots. Cover crop rotation did not reduce the number of C. rotundus tubers significantly, despite the dense sudangrass canopy shading the soil during most of the summer. Cyperus rotundus was effectively controlled by the solarization treatment. All methods controlled C. esculentus, especially when there were no crops growing in the summer. When broccoli was grown after two years of various management strategies, the cultivation treatment showed a 44% yield reduction compared with the weed‐free control, while the solarization treatment increased broccoli yield by 64% compared with the non‐solarization treatment. Rotations that included sudangrass had low broccoli yield when either C. rotundus or C. esculentus were present.     

Genetic variation and structure of Solanum elaeagnifolium in Australia analysed by amplified fragment length polymorphism markers

Solanum elaeagnifolium is a weed of national significance in Australia. However, the genetic diversity of S. elaeagnifolium is poorly understood. Four amplified fragment length polymorphism primer combinations were utilised to investigate the genetic variation and structure of 187 S. elaeagnifolium individuals collected from 94 locations in Australia. High genetic diversity was found, with an average Jaccard's genetic similarity at 0.26. Individuals were assigned to two genetic clusters or considered as admixed according to their membership coefficient value (q) calculated by Bayesian model‐based genetic structure analysis. This suggested that Australian S. elaeagnifolium may have originated from two distinct gene pools. These results were further supported by principal co‐ordinates analysis. Large spatial groups of individuals assigning to these two gene pools were found in western Victoria and south‐western New South Wales (NSW) and northern NSW, which correlated well with the early records of S. elaeagnifolium in both regions. The high genetic diversity found here could add difficulties to effective control of S. elaeagnifolium across regions.     

Genetic diversity of Solanum elaeagnifolium,an invasive problematic weed in Jordan

Solanum elaeagnifolium (silverleaf nightshade) is a problematic weed that is common in Jordan and difficult to control. The weed exhibits distinct morphological variations in growth habit, leaf shape, leaf margins, flower colour and presence or absence of spines between individuals among and within populations suggesting genetic differences. Genetic variations among 61 samples of S. elaeagnifolium collected from heavily infested sites in the central Jordan Valley were investigated using six simple sequence repeat (SSR) markers and eight amplified fragment length polymorphism (AFLP) primer combinations. Results showed that 111 out of 675 AFLP bands were polymorphic generating polymorphism information content (PIC) of 38.0%, while 23 SSR polymorphic alleles were detected generating a PIC of 30.8%. Phylogenetic analysis using RaxML software identified four major clades with a clear clustering of the samples with their collection sites. Genetic analysis using both techniques revealed high level of genetic diversity among S. elaeagnifolium samples collected from a small geographical area indicating that a range of genetic diversity may be detected in weed populations across the country that may complicate its management.     

Genetic diversity of giant reed ( A rundo donax) in Australia

The perennial grass, Arundo donax, has shown potential as a promising biomass crop. However, it has become invasive in a number of areas and declared a noxious weed in some jurisdictions, making proposals to grow A. donax for commercial use in Australia controversial. Evidence of asexual reproduction and the presence of a single genetic clone in Australia was investigated, as such characteristics would indicate a limited risk of escape and invasion. Using amplified fragment length polymorphism markers, the genetic diversity of 218 A. donax samples from across Australia was examined. The samples were found to separate into two distinct genetic groups, or clades. There was only a small amount of genetic diversity within a clade (0.9 and 1.5%). However, there was a larger difference between the clades of 19.8%, suggesting the presence of two distinct A. donax genotypes in Australia. The low level of genetic variation in Australian A. donax that was found in this study indicates that spread is essentially by vegetative means and suggests that if grown in areas where it is separated from natural water dispersal events, A. donax poses a low risk of becoming invasive.     

Genetic variation of the invasive Campuloclinium macrocephalum,Asteraceae in South Africa,inferred from molecular markers

Campuloclinium macrocephalum is native to Central and South America, but is a highly invasive weed in South Africa, where it is commonly known as the ‘pompom weed’. It is targeted for biological control, the success of which will depend on host specificity and biotype compatibility to its full genetic diversity in South Africa. We investigated the genetic diversity and phylogeography of 52 specimens from across South Africa, 14 from Argentina and three from Brazil using nuclear ribosomal ITS regions. We further explored the AFLP marker diversity in 54 South African, 25 Argentine and three Brazilian specimens. Maximum parsimony analysis of the ITS sequence data produced an unresolved phylogeny. However, three haplotypes were recognised via network analysis. All South African, one Brazilian and all bar one of the Argentine individuals shared a single haplotype. AFLP analyses generated two genetic clusters with a low net nucleotide distance of 0.115 and further revealed that most plants were a mixture of alleles from these two genetic clusters. Although there was a significant genetic variation among the populations, genetic differentiation and mean heterozygosity were low, suggesting that clonal reproduction may be occurring. The current South African populations may therefore be clonal products with different proportions of genetic admixture introduced more than once. The original point of entry appears to be Gauteng, South Africa. Long‐distance dispersal appears to have played a major role in its spread across South Africa. Candidate Argentine biological control agents should therefore be effective on C. macrocephalum in South Africa.     

Genetic variation and structure in native and invasive Solidago canadensis populations

Solidago canadensis is native to North America, but has become a noxious invasive plant in China. We know only a little about its invasion history and the effects of introductions on its genetic composition. Here, we investigated genetic variation and structure between 15 North American and 13 Chinese populations of S. canadensis using AFLP makers. Four AFLP loci suggested relatively high genetic diversity of this weed and similar genetic variation between the invasive range and the native range. Most genetic variation was within populations across two ranges, but the Chinese range had a higher degree of among‐population variation than the North American range. Multiple tests, including Bayesian assignment, UPGMA analysis, PCoA and analysis of ‘isolation by distance’, showed that the Chinese populations originated from at least two distinct native sources and that secondary introduction or dispersal should be common in China. Also, North American populations were possibly a single genetic group. Overall, S. canadensis in China was probably founded from multiple introductions and then spread through long‐distance dispersal associated with human activities. Genetic variability in the species in the invaded range appears to have favoured establishment and spread and may well provide a challenge to successful control.     

中国及欧洲各国的苹果蠹蛾种群遗传多样性分析

为研究不同国家和地区苹果蠹蛾Cydia pomonella种群的遗传多样性,对采自我国新疆维吾尔自治区和黑龙江省,以及德国、法国和西班牙等欧洲国家的11个种群共60个苹果蠹蛾个体进行基因组重测序,有效测序样本数为56个,共获得8 455 843个群体单碱基突变（single nucleotide polymorphism,SNP）位点。利用SNP数据进行了苹果蠹蛾群体遗传进化树的构建、主成分分析以及遗传结构分析。结果显示,入侵我国黑龙江省的苹果蠹蛾与德国BD种群更为接近,我国新疆维吾尔自治区与黑龙江省苹果蠹蛾种群有一定的分化,前者种群遗传多样性更低。表明我国东北地区和西北地区的苹果蠹蛾种群具有不同的遗传多样性特征,入侵我国的苹果蠹蛾种群可能来源于欧洲。     

Cyperus esculentus L. — A new weed in Israel

Cyperus esculentus L., a cosmopolitan noxious weed, has been recorded for the first time in an agricultural irrigated field in Israel. Hand-weeding, herbicides and soil disinfestation methods were only partially effective in controlling the weed. The distribution map of the weed is unknown, and it is unclear how the weed has been introduced into Israel. We estimate thatC. esculentus has a high risk potential to spread further and cause damage to Israeli agriculture, and therefore its spread should be restricted. http://www.phytoparasitica.org posting May 18, 2005.     

Reconstructing the invasion of Cyperus esculentus in Central Europe

Cyperus esculentus (yellow nutsedge) is a serious weed in agriculture worldwide and observational data suggest that it has recently started to spread rapidly in Central Europe. We studied its spatiotemporal invasion pattern, rate of spread and habitat affiliation in Austria, Germany and Switzerland, using retrospective distribution data from various sources and a method that accounts for sampling bias. In total, we found 265 records of C. esculentus since 1900. Multiple accidental introductions, coupled with subsequent regional radial expansion, describe the spatiotemporal range expansion of C. esculentus in the study area. Cumulative number of records and of the number of invaded grid cells showed a continuous increase, but spread has become more pronounced recently (>2005). Invasion hotspots were located in the warmest regions of the study area, as well as in regions with an oceanic climate. On average, the rate of spread within these invasion hotspots ranged between 3.1 and 5.7 km per year. Cyperus esculentus was primarily found on arable land, while other habitats have been rarely invaded. The integration of different data sources improved the cover of distribution data and was useful for reconstructing the incipient and recent invasion phase of C. esculentus. The data suggest that control may be best achieved by preventing long‐range dispersal and containing or eradicating incipient infestations of C. esculentus.     

Do the introductions by botanical gardens facilitate the invasion of Solidago canadensis (Asterceae) in China?

Many invasive plants have long been suspected of firstly being introduced and cultivated by a local botanical garden or nursery and then escaping into the field after adapting to the novel environment. The role of botanical gardens in the spread of invasive plants has not yet been explored experimentally. In this article, we studied the possible roles of two botanical gardens in the spread of invasive Solidago canadensis (Asterceae) in China by analysing genetic relationships of invasive and native (United States) populations with intersimple sequence repeats markers. Our results showed a high genetic variation (mean He = 0.292) and a large proportion of genetic variation (85.6%) residing within populations. Solidago canadensis was possibly introduced firstly into eastern China. The plants from Lushan Botanical Garden showed distant genetic distance from all of the other populations, suggesting that this botanical garden had little effect on the invasion of S. canadensis. Populations from Wuhan Botanical Garden in central China, however, showed close genetic relationships with local populations and populations in west and south‐west China, suggesting gene exchange between these populations. Thus, risk assessment is critical for plant introduction and conservation, as introductions of alien plants by botanical gardens may facilitate plant invasions, while plants conserved in botanical gardens may be at risk by surrounding plant invasions.     

Evaluating ecological‐niche factor analysis as a modelling tool for environmental weed management in island systems

Management actions are essential for mitigating the potentially harmful changes in biodiversity, ecosystem function and crop/forest productivity caused by invasive species. Species distribution models, if reliable, could be used to design effective management strategies. Although several modelling methods well suited for studying invasive species have been developed for presence‐only data, often the size of available data sets for modelling is small and results are not validated with test samples. Moreover, the impact of such methods in practical applications has been overlooked. Here, we evaluated the reliability of the modelling approach based on ecological‐niche factor analysis (ENFA) implemented in Biomapper software when applied to environmental weed data in the Azores. Presence‐only data sets of two top invasive woody species (Pittosporum undulatum and Acacia melanoxylon) were used. The continuous Boyce curve was used for validation, calculated either in Biomapper (cross‐validation) or based on test samples. The species' most habitable areas that should be regarded as management targets were thus estimated from modelling and validation. By imposing size restrictions on the presence‐only data sets used in modelling and validation, other habitable areas were defined and compared. The ENFA proved to be a suitable method for modelling environmental weed distributions, regardless of the presence‐only dataset size. Moreover, the cross‐validation of Biomapper was reliable, although its results should be interpreted with caution as they could potentially lead to statistically different management target areas.     

Genetic uniformity of Alternanthera philoxeroides in South China

Alternanthera philoxeroides (Mart.) Grisb is an invasive weed that is widespread in a variety of habitats around the world. It was introduced into China in the 1930s, and today occurs in 20 provinces. The level and pattern of genetic diversity of 193 individuals from 11 land‐grown A. philoxeroides populations from South China were determined using 81 intersimple sequence repeat markers. Mean Nei's gene diversity (H_E) was 0.0203 ± 0.008, and total diversity (H_T) was 0.0286, indicating that genetic diversity in A. philoxeroides in South China is very low. There was a greater proportion of diversity within populations than among (G_ST = 0.292) populations. Gene flow (Nm) among populations was 0.607. These results are in accordance with the assumption that populations in South China are genetically depauperate because of the short introduction history and the partially clonal propagation of this weed.     

Impacts of cropping system and management practices on the assembly of weed communities

Understanding how weed communities assemble as a function of biotic and abiotic filters and transform through time has important implications for the sustainable management of agronomic systems. In a three‐year study, we evaluated weed community responses to lucerne (Medicago sativa, perennial) vs. continuous spring wheat (Triticum aestivum, annual, CSW) and weed management practices where weeds in the CSW system were managed with three contrasting approaches (herbicide, tillage or sheep grazing). Our results indicated no differences in weed diversity between the perennial and annual crops or across the different management practices in CSW. However, there were differences in weed community composition. Lucerne, with the exception of the establishing year, impeded the growth and reproduction of several annual weeds, including Amaranthus retroflexus, Thlaspi arvense, Lamium amplexicaule and Chenopodium album, but favoured perennial broad‐leaved weeds such as Taraxacum officinale and Cirsium arvense. The replacement of herbicide treatments in pre‐plant and post‐harvest in CSW with soil tillage or sheep grazing selected for different weed communities beyond the second year of establishment. The weed species driving the differences in CSW systems were Androsace occidentalis, more common in CSW managed chemically; Asperugo procumbens, more common in CSW managed with tillage; and T. officinale and Lactuca serriola, more common in CSW managed with sheep grazing. Understanding how cropping systems modify weed communities is a necessary step to shift from reactive weed control programmes to predictive management strategies.     

Genetic diversity within and between sulfonylurea‐resistant and susceptible populations of Schoenoplectus juncoides in Japan

To reveal the effects of herbicide selection on genetic diversity in the outcrossing weed species Schoenoplectus juncoides, six sulfonylurea‐resistant (SU‐R) and eight sulfonylurea‐susceptible (SU‐S) populations were analysed using 40 polymorphic inter‐simple sequence repeat loci. The plants were collected from three widely separated regions: the Tohoku, Kanto and Kyushu districts of Japan. Genetic diversity values (Nei's gene diversity, h) within each SU‐S population ranged from h = 0.125 to h = 0.235. The average genetic diversity within the SU‐S populations was H_S = 0.161, and the total genetic diversity was H_T = 0.271. Although the H_S of the SU‐R populations (0.051) was lower than that of the SU‐S populations, the H_T of the SU‐R populations (0.202) was comparable with that of the SU‐S populations. Most of the genetic variation was found within the region for both the SU‐S and SU‐R populations (88% of the genetic variation respectively). Two of the SU‐R populations showed relatively high genetic diversity (h = 0.117 and 0.161), which were comparable with those of the SU‐S populations. In contrast, the genetic diversity within four SU‐R populations was much lower (from h = 0 to 0.018) than in the SU‐S populations. The results suggest that selection by sulfonylurea herbicides has decreased genetic diversity within some SU‐R populations of S. juncoides. The different level of genetic diversity in the SU‐R populations is most likely due to different levels of inbreeding in the populations.     

Genetic diversity of Pueraria lobata (kudzu) and closely related taxa as revealed by inter-simple sequence repeat analysis

Kudzu (Pueraria lobata) is a noxious weed infesting some areas of the USA. Knowledge of its genetic variation in both native and invasive areas can lead to effective biological control measures. Inter-simple sequence repeat (ISSR) variations were studied in P. lobata and its four closely related congeneric species (P. edulis, P. montana, P. phaseoloides and P. thomsoni). ISSR results allowed a clear separation of these five species. For P. lobata, 108 plants from China and USA were analysed. The samples from the US were genetically closer to Chinese P. lobata populations than to other congeneric populations. High genetic differentiation was found for P. lobata, P. montana and P. thomsoni in Chinese samples. High genetic diversity and low population differentiation was found in P. lobata samples of the US. This supports the hypothesis of multiple introductions into the USA from different sources in Japan or China, followed by subsequent gene exchange and recombination.     

Extreme variation in the reproductive phenology of the weed Ruellia nudiflora

Temporal variation in morphological and life‐history traits is directly linked to phenotypic plasticity in perennial plants. Phenotypic plasticity in reproductive phenology determines colonisation ability and population persistence in invasive weeds. We describe the reproductive phenology of Ruellia nudiflora (a cleistogamous weed) and assess the plasticity of its response to between‐year environmental variation in two contrasting light environments. We recorded the flower and fruit production of focal plants under two experimental levels of light intensity (open vs. shaded) over two years. Our results suggest that light differentially affects the phenology of reproductive structures, but not between‐year variation. Specifically, individual production of chasmogamous structures (flowers and fruit) ended earlier under shaded conditions than in the open, whilst production of cleistogamous fruits was not affected. At the population level, there was between‐year variation in the phenology of chasmogamous structures, which were bimodal and unimodal in the first and second year respectively. At the individual level, we found very low repeatability, suggesting high levels of phenotypic plasticity. Temporal variation in rainfall did not explain phenological variation. Although shade did not affect between‐year variation, it produced a briefer period of production of chasmogamous structures. This effect of shade may have some consequences for the genetic background of R. nudiflora's progeny, because only chasmogamous flowers can be out‐crossed, and this therefore might be an important factor to consider when designing management strategies.     

Effect of anaerobic soil disinfestation amendment type and C:N ratio on Cyperus esculentus tuber sprouting,growth and reproduction

Anaerobic soil disinfestation (ASD) is a cultural technique primarily targeted for control of soilborne plant pathogens, but can also impact weed propagules. A repeated pot study was conducted to evaluate ASD treatment impact on sprouting and growth of introduced Cyperus esculentus (yellow nutsedge) tubers using dry molasses‐based and wheat bran‐based amendment mixtures at four carbon‐to‐nitrogen (C:N) ratios (from 10:1 to 40:1) and compared with a non‐amended control. The mean percentage of sprouted tubers recovered after ASD treatment was lower for wheat bran‐based (42%) than dry molasses‐based (65%) amendments, and tuber production was 1.6‐fold higher in dry molasses‐based than wheat bran‐based treatments. The highest percentage of sprouted tubers (79%) and the highest mean production of large tubers (threefold higher than wheat bran‐based and 1.7‐fold higher than molasses‐based amendments) were observed for the non‐amended control. Tuber sprouting was significantly lower from all ASD treatments (regardless of amendment C:N ratio) compared with the non‐amended control at a 15 cm burial depth. New tuber production was lowest at C:N ratios of 10:1 and 20:1 and more than twofold higher in the non‐amended control. Wheat bran‐based amendments reduced above‐ground C. esculentus biomass compared with the non‐amended control and ASD treatments with molasses‐based amendments, and reduced below‐ground biomass compared with molasses‐based amendments. Above‐ground biomass was highest at amendment C:N ratio of 10:1, and below‐ground biomass was highest at amendment C:N ratio of 40:1 and the non‐amended control. ASD treatment with wheat bran‐based amendments at lower C:N ratios reduced tuber sprouting and reproduction compared with the non‐amended control, but not at rates high enough to use as a primary weed management tactic.