Using long-term data and a stage-classified matrix to assess conservation strategies for an endangered turtle (Clemmys guttata)

Reptiles are in decline globally, and one-third of turtle species are considered endangered or vulnerable. Conservation of turtles presents special challenges, as turtles are long-lived, and have delayed sexual maturity, making long-term study necessary for accurate calculation of life history parameters. The spotted turtle (Clemmys guttata) is listed as an endangered species in Canada. A population in eastern Georgian Bay, Ontario has been the focus of the longest-running ecological study (30 years) on the species to date. The objective of the current project was to use the long-term demographic data to parameterize a stage-classified matrix and to use the model to asses several hypothetical management scenarios. Elasticity analyses and simulations indicated that small changes in adult survivorship would have the largest proportional effect on population growth rate, and that increasing survivorship of juveniles to 100% would result in the largest increase in population growth rate. Simulation of nest protection and headstarting scenarios indicated that these are inefficient conservation strategies for this species. We recommend that adults, and when possible, juveniles, be the stages targeted for conservation in spotted turtles and other long-lived iteroparous vertebrates.     

Effects on erosion of two post-fire management practices: clear-cutting versus non-intervention

The different erosion responses derived from two contrasting post-fire management approaches were evaluated: the clear-cutting and immediate removal of the burnt trees and; the non-intervention, that is, leaving the vegetation untouched and the burnt trees standing. Erosion rates were obtained from 200 m² experimental plots, large enough to include the complete processes of rill and inter-rill erosion. Erosion rates of the clear-cut plot were very similar to those of the non-modified plot. Part of the burnt trees was still economically usable. The trees left in situ gradually decayed and were tumbled by the wind; the fire risk incremented. The opening of timber track networks without conservation measures was one of the most important erosion problems associated with clear-cutting. The complementary practice of brushwood dike-construction would need a preliminary study before being applied.     

Impacts of historical land use changes on erosion and agricultural soil properties in the Kali Basin at Lake Balaton, Hungary

Historical land use changes may have significant impact on erosion and agricultural soil properties, including soil degradation by acidification, nutrient leaching and organic matter depletion. The Kali Basin study area, a small catchment of high landscape value located in a national park at Lake Balaton, Hungary, with its historical agricultural records, together with the available unique historical land use data for the last 200 years, provides an opportunity to study and model impacts of historical land use changes on erosion and agricultural soil properties. Comparison of long-term land uses with present soil degradation indicator parameters showed that permanent arable land use has led to degradation of both the physical and chemical properties of soils in the Kali Basin. Application of the SEDEM/WATEM distributed erosion and sediment transport model showed that, despite the low overall sediment export from the catchment, land use changes introduced by property ownership and agricultural changes have decreased average soil erosion in the catchment but increased relative sediment export to Lake Balaton. This is due to changes in the land cover pattern that allow more sediment transported to the river system. The overall conclusion of this study is that besides the size and area proportion of land use types, land use pattern seems to be equally important in soil erosion and degradation processes, thus land use pattern is a key factor for landscape planning and development in the Kali Basin. A relationship between the sociological and agro-ecological reasons for the recorded land use changes is also shown in this study.     

Demonstrating decline of an iconic species under sustained indigenous harvest – The pig-nosed turtle (Carettochelys insculpta) in Papua New Guinea

Papua New Guinea has astonishing biological and cultural diversity which, coupled with a strong community reliance on the land and its biota for subsistence, add complexity to monitoring and conservation and in particular, the demonstration of declines in wildlife populations. Many species of concern are long-lived which provides additional challenges for conservation. We provide, for the first time, concrete evidence of a substantive decline in populations of the pig-nosed turtle (Carettochelys insculpta); an important source of protein for local communities. Our study combined matched village and market surveys separated by 30 years, trends in nesting female size, and assessment of levels and efficacy of harvest, each of which was an essential ingredient to making a definitive assessment of population trends. Opportunities for an effective response by local communities to these declines needs to consider both conservation and fisheries perspectives because local communities consider the turtle a food resource, whereas the broader global community views it as a high priority for conservation. Our study in the Kikori region is representative of harvest regimes in most rivers within the range of the species in Papua New Guinea, and provides lessons for conservation of many other wildlife species subject to harvest.     

Factors maintaining species diversity in satoyama, a traditional agricultural landscape of Japan

Satoyama is a traditional agricultural landscape in Japan. It contains many kinds of organisms, including endangered species. Satoyama is composed of several habitat types, including paddy fields, secondary forests, secondary grasslands, ponds, and streams. High species richness has been sustained in most habitats by anthropogenic disturbances of intermediate impact, mainly activities related to agriculture. The variety of habitats and connectivity among them have contributed to the high species diversity within satoyama. These factors allow organisms to move among habitats and use different habitat types to obtain different resources. The connectivity among habitats is often more vulnerable than the specific habitats themselves under anthropogenic influences. In satoyama, species that require connectivity among habitats (e.g., grey-faced buzzard [Butastur indicus] and Genji firefly [Luciola cruciata]) have tended to decrease. The grey-faced buzzard is categorized as a “vulnerable” species in the Japanese Red List. It usually nests in forest trees and forages in habitats such as paddy fields, grasslands, and forests. Its foraging locations shift seasonally depending on food availability. It is thought that the degradation of either paddy fields or forests in a landscape may result in the disappearance of this species. The Genji firefly spends its larval period in stream water, pupates underground along streams, and flies near streams after emergence. This species requires not only the integrity of streams and nearby areas, but also connectivity between these areas. The ecology of these species suggests that the variety of habitats and connectivity among them are critical factors for their survival.     

Competition between invasive earthworms (Amynthas corticis, Megascolecidae) and native North American millipedes (Pseudopolydesmus erasus, Polydesmidae): Effects on carbon cycling and soil structure

Invasive earthworms can have significant impacts on C dynamics through their feeding, burrowing, and casting activities, including the protection of C in microaggregates and alteration of soil respiration. European earthworm invasion is known to affect soil micro- and mesofauna, but little is known about impacts of invasive earthworms on other soil macrofauna. Asian earthworms (Amynthas spp.) are increasingly being reported in the southern Appalachian Mountains in southeastern North America. This region is home to a diverse assemblage of native millipedes, many of which share niches with earthworm species. This situation indicates potential for earthworm-millipede competition in areas subject to Amynthas invasion.In a laboratory microcosm experiment, we used two ¹³C enriched food sources (red oak, Quercus rubra, and eastern hemlock, Tsuga canadensis) to assess food preferences of millipedes (Pseudopolydesmus erasus), to determine the effects of millipedes and earthworms (Amynthas corticis) on soil structure, and to ascertain the nature and extent of the interactions between earthworms and millipedes. Millipedes consumed both litter species and preferred red oak litter over eastern hemlock litter. Mortality and growth of millipedes were not affected by earthworm presence during the course of the experiment, but millipedes assimilated much less litter-derived C when earthworms were present.Fauna and litter treatments had significant effects on soil respiration. Millipedes alone reduced CO₂ efflux from microcosms relative to no fauna controls, whereas earthworms alone and together with millipedes increased respiration, relative to the no fauna treatment. CO₂ derived from fresh litter was repressed by the presence of macrofauna. The presence of red oak litter increased CO₂ efflux considerably, compared to hemlock litter treatments.Millipedes, earthworms, and both together reduced particulate organic matter. Additionally, earthworms created significant shifts in soil aggregates from the 2000-250 and 250-53 μm fractions to the >2000 μm size class. Earthworm-induced soil aggregation was lessened in the 0-2 cm layer in the presence of millipedes. Earthworms translocated litter-derived C to soil throughout the microcosm.Our results suggest that invasion of ecosystems by A. corticis in the southern Appalachian Mountains is unlikely to be limited by litter species and these earthworms are likely to compete directly for food resources with native millipedes. Widespread invasion could cause a net loss of C due to increased respiration rates, but this may be offset by C protected in water-stable soil aggregates.     

Translocations of eight species of burrow-nesting seabirds (genera Pterodroma, Pelecanoides, Pachyptila and Puffinus: Family Procellariidae)

Development of seabird translocation techniques is required to meet species recovery objectives, to improve conservation status, and to restore ecological processes. During 1997-2008 we undertook translocation trials on eight petrel species of four genera within the New Zealand region: common diving petrel (Pelecanoides urinatrix), fairy prion (Pachyptila turtur), grey-faced petrel (Pterodroma macroptera gouldi), Pycroft’s petrel (Pterodroma pycrofti), Chatham petrel (Pterodroma axillaris), Chatham Island taiko (Magenta petrel; Pterodroma magentae), fluttering shearwater (Puffinus gavia), and Hutton’s shearwater (Puffinus huttoni). A total of 1791 chicks within 5 weeks of fledging were moved up to 240 km, placed in artificial burrows and hand-fed until they fledged. Of these, 1546 fledged, and so far at least 68 have returned as adults to the translocation sites. Most birds were crop-fed a puree based on tinned sardines and fresh water. This diet worked well for all species regardless of their typical natural diet (planktonic crustaceans, squid, or fish) with all species fledging above or close to mean natural fledging weights.     

Monitoring the performance of wild-born and introduced lizards in a fragmented landscape: Implications for ex situ conservation programmes

Ex situ conservation of animal populations may benefit from captive-breeding programmes, but these are criticised because they are assumed to be difficult, time-consuming and expensive, while they do not guarantee success. However, such assumptions remain untested in most organisms; for example, introductions could be very useful for recovering populations of small-sized species with short generation time, no learned behaviours, and ease to rear in captivity. Here, we document an easy, cheap and successful reintroduction programme of the lacertid lizard Psammodromus algirus. Two captive-bred cohorts (178 juveniles in 2001 and 187 in 2002) were released in four woodland fragments (0.9-5.2 ha) at two localities (B and V); B housed a stable lizard population whereas V apparently lacked a viable population of lizards. We monitored introduced and native lizards during 2002 and 2003, and carried out a corroborative searching in 2006 which confirmed the existence of a lizard population at site V. Introduced lizards had higher activity and dispersed more frequently among woodland fragments than native ones. Survivorship and growth rates were similar for both groups, but introduced juveniles were about 25% larger than native ones, due to both early hatching and better rearing conditions. The whole procedure was easily implemented in our Faculty facilities (mean hatching and hatchling survival rates of 0.90 and 0.87), and cost less than 20,000 € (excluding salaries). Therefore, similar programmes may be of wide application in small animals and of practical importance for species with a meta-population structure living in fragmented landscapes.     

Effects of agricultural practices on color, carotenoids composition, and minerals contents of sweet peppers, cv. Almuden

Consumers demand organic products because they believe they are more flavorful and respectful to the environment and human health. The effects of conventional, integrated, and organic farming, grown in a controlled greenhouse, on color, minerals, and carotenoids of sweet pepper fruits ( Capsicum annuum), cv. Almuden, were studied. Experimental results proved that organic farming provided peppers with the highest (a) intensities of red and yellow colors, (b) contents of minerals, and (c) total carotenoids. Integrated fruits presented intermediate values of the quality parameters under study, and conventional fruits were those with the lowest values of minerals, carotenoids, and color intensity. As an example, the concentrations of total carotenoids were 3231, 2493, and 1829 mg kg (-1) for organic, integrated, and conventional sweet peppers, respectively. Finally, organic red peppers could be considered as those having the highest antioxidant activity of all studied peppers (agricultural farming and development stage).     

Changes in agricultural management drive the diversity of Burkholderia species isolated from soil on PCAT medium

In order to assess the diversity of culturable Burkholderia populations in rhizosphere and bulk soil and to evaluate how different agricultural management regimes and land use history affect this diversity, four treatments were evaluated: permanent grassland; grassland converted into maize monoculture; arable land and arable land converted into grassland. Burkholderia isolates obtained on PCAT medium were grouped in 47 clusters using 16S ribosomal RNA gene based PCR-DGGE combined with BOX genomic fingerprinting (DGGE-BOX). The distribution of the isolates in the DGGE-BOX clusters was used to calculate the Shannon diversity index per treatment. Interestingly, we observed that the Burkholderia diversity was affected by changes in the agricultural management, since the highest diversity was observed in permanent grassland and in continuous arable land. In addition, the diversity tended to be higher in the rhizosphere than in the corresponding bulk soil. The use of species abundance models indicated that rhizosphere communities had more even distributions than communities collected from the bulk soil. Identification of isolates revealed that only 2% of these belonged to the B. cepacia complex and that the majority was assigned to either (1) new Burkholderia species or (2) Burkholderia species that had originally been isolated from soil. Isolates classified as B. hospita, B. caledonica and Burkholderia sp. ‘LMG 22934’ and ‘LMG 22936’ were found mainly in the arable land, while isolates belonging to Burkholderia sp. ‘LMG 22929’ and B. phytofirmans were associated with the grassland area. Another potentially new Burkholderia species, ‘LMG 22932’, was found in both areas, in close association with the maize rhizosphere.     

Crofting and bumblebee conservation: The impact of land management practices on bumblebee populations in northwest Scotland

The northwest of Scotland is a stronghold for two of the UK’s rarest bumblebee species, Bombus distinguendus and Bombus muscorum. The predominant form of agricultural land management in this region is crofting, a system specific to Scotland in which small agricultural units (crofts) operate rotational cropping and grazing regimes. Crofting is considered to be beneficial to a wide range of flora and fauna. However, currently there is a lack of quantitative evidence to support this view with regard to bumblebee populations. In this study we assessed the effect of land management on the abundance of foraging bumblebees and the availability of bumblebee forage plants across crofts in northwest Scotland. The results of our study show that current crofting practices do not support high densities of foraging bumblebees. Traditional crofting practice was to move livestock to uplands in the summer, but this has been largely abandoned. Summer sheep grazing of lowland pasture had a strong negative impact on bumblebee abundance and forage plant availability throughout the survey period. The use of specific ‘bird and bee’ conservation seed mixes appears to improve forage availability within the crofted landscape, although the number of bees observed remained low. Of the forage plants available, the three most frequently visited species were from the Fabaceae. We therefore conclude that the creation of agri-environment schemes which promote the use of Fabaceae-rich seed mixes and encourage the removal of sheep grazing on lowland areas throughout the summer are essential in order to conserve bumblebee populations within crofted areas.     

Seabird and longline interactions: effects of a bird-scaring streamer line and line shooter on the incidental capture of northern fulmars Fulmarus glacialis

Interactions between seabirds and longline fishing can cause incidental bird mortality and reduced gear efficiency. The potential for solving these problems by using a bird-scaring streamer line and a line shooter was investigated in commercial longlining in the northern Atlantic off the coast of Norway. We compared the bycatch rate of northern fulmars Fulmarus glacialis, the loss rate of baits to fulmars and the catch rates of fish target species among lines set with either of these mitigation measures, a combination of both and no mitigation measure. A total of 58,420 hooks were set in each of the four treatments. No birds were caught using the bird-scaring line alone and a single fulmar was caught when the bird-scaring line was used in combination with the line shooter. In contrast, 32 fulmars were caught in sets with no mitigation device and thirteen in sets with the line shooter alone. Losses of mackerel bait were reduced when the bird-scaring line was used, but not by using the line shooter alone. Longlines set with the line shooter reached 3 m depth 15% faster then lines set without the line shooter; beyond this depth sinking rates were similar (about 15 cm s⁻¹). Fish catch did not vary significantly among setting methods. These results should also be applicable to the bycatch of Fulmarus spp. in demersal longline fisheries worldwide.     

Toward the restoration of a sustainable population of a threatened aquatic plant, Nymphoides peltata: Integrated genetic/demographic studies and practices

We provide a brief review of practices and relevant studies for restoration of Nymphoides peltata (yellow floating heart, Asaza), a distylous floating-leaf clonal plant, in Lake Kasumigaura, Japan to develop a model of integrated genetic and demographic conservation for threatened plants. Several theoretically expected issues, such as sudden extinction of small populations with low genetic diversity, limited seed production in small-sized local populations, and significantly high heterozygosity in adults that have survived environmental change, were ascertained through integrated studies on demography with discrimination of genets and genetics using highly polymorphic genetic markers. Investigation of genetic properties of the remnant soil seed bank suggested that the seed bank could potentially restore genetic diversity, although the fitness reduction of seed banks caused by inbreeding could affect the success of restoration. As a result of restoration efforts, increases in the number of local populations and genets in the Lake Kasumigaura metapopulation have led to population recovery.     

Effects of Lumbricus terrestris, Allolobophora chlorotica and Eisenia fetida on microbial community dynamics in oil-contaminated soil

Oil spills are one of the most common types of soil pollution. Bioremediation has become an attractive alternative to physicochemical methods of remediation, where feasible. Earthworms have been shown to stimulate the degradation of petroleum hydrocarbons in soil, and it was hypothesized that the role of earthworms in remediation lies in the enhancement of an oil degrading microbial community. The aim of this study was to characterize microbial activity and community dynamics in oil-contaminated soil incubated with or without earthworms. Three earthworm species (Eisenia fetida, Allolobophora chlorotica and Lumbricus terrestris) were incubated in crude oil polluted soil (ca. 10,000 mg/kg total petroleum hydrocarbons (TPH)) and a reference soil for 28 d. Control treatments with manual mixing and/or cattle dung amendment were also included. In the oil-contaminated soil, respiration and concentration of microbial biomass was significantly enhanced by earthworm amendment, and TPH concentrations decreased significantly. These effects were less evident in treatments with A. chlorotica, possibly due to a difference in behavior, since individuals of this endogeic species were found in a state of inactivity (aestivation). Microbial community dynamics were described by phospholipid fatty acid (PLFA) analyses. After 28 d, similar shifts in the soil PLFA composition were observed in the oil-contaminated soil irrespective of worm species. Fungal:bacterial ratios were increased in the presence of worms, but also by addition of dung as a food source, indicating a non-specific effect of metabolizable substrates. In contrast, the fatty acids 17:1ω8 (=Δ9-heptadecenoic acid) and 20:4ω6c (arachidonic acid) were specifically stimulated by the presence of earthworms in the oil-contaminated soil. The results showed that earthworms can contribute positively to bioremediation of oil-contaminated soil, but that the effect may be species-dependent.     

Herbicides, weeds and endangered species: management of bitou bush (Chrysanthemoides monilifera ssp. rotundata) with glyphosate and impacts on the endangered shrub, Pimelea spicata

Environmental weed invasion threatens the biodiversity of native species. Unfortunately, managing these weeds may also affect biodiversity adversely. A recent example occurred when glyphosate, a herbicide used to control the highly invasive weed, bitou bush (Chrysanthemoides monilifera ssp. rotundata), accidentally drifted over a small population of an endangered shrub, Pimelea spicata. Following concerns that the affected population would not recover and, thereby, cause the local extinction of P. spicata, we conducted a series of glasshouse and field experiments to explore the impacts of glyphosate on this endangered species. Seedlings and young plants of P. spicata, in which the tap root was undeveloped, were killed by a single application of glyphosate. Older plants with a well developed tap root also died back initially, but about 50% of individuals re-sprouted. This re-growth was associated with a significant decrease in tap root diameter, implying that further disturbance, including repeated treatment with glyphosate, would kill plants by impairing their potential for recovery. Unlike some sclerophyllous native shrubs, the tolerance of P. spicata to glyphosate was limited, even when its growth was slowed artificially by limiting water availability. Winter applications of glyphosate to manage infestations of bitou bush will impact adversely on populations of P. spicata and may also affect the other rare and endangered species whose survival is threatened by this species, even though some natives are unaffected by the herbicide. Protecting native biodiversity from bitou bush will involve sustainable weed management that minimises impacts on non-target native species.     

Effects of landscape change on clutches of Phyllomedusa tarsius, a neotropical treefrog

Phyllomedusa tarsius is an arboreal frog species that suspends its eggs on leaves above water in order to achieve the high relative humidity necessary for embryo development. I compared the hatching success of P. tarsius in ponds located in pasture, Vismia spp. regrowth, Cecropia spp. regrowth, forest fragments and continuous forest at a site in central Amazônia. Reproductive success of P. tarsius is measured as percentage of clutches producing at least one tadpole and number of tadpoles produced per clutch. Reproductive success was higher in Cecropia regrowth, forest fragments and continuous forest, compared to pasture and Vismia regrowth. Desiccation and flooding were the main causes of clutch loss in pasture and Vismia regrowth, while predation was more frequent in forest and Cecropia regrowth. The levels of successful of P. tarsius clutches observed across all habitat types suggests that a landscape mosaic including pasture, secondary growth and forest fragments may allow for recolonization and genetic exchange to occur in isolated forest patches.     

Biogeomorphological influence of the Hawaiian silversword (Argyroxiphium sandwicense DC.) on soil erosion in Haleakala (Maui,Hawai'i)

Soils were examined at 2505 m elevation in Haleakala's crater (Maui, Hawai?i) beneath 50 adult Hawaiian silversword plants (Argyroxiphium sandwicense DC.); mean canopy diameter was 42.0 cm. Exposed volcanic Inceptisols (Andic Humitropepts) seem significantly eroded beyond the dense rosette crowns, but remain unaffected below plants. Rosettes are perched on isolated basal soil mounds or pedestals 27–121 mm high (mean: 77.5 mm). Geomorphic field response of soils below rosettes and adjacent (∼ 100 cm apart) bare soils differs. Infiltration rates are higher under plants (mean: 158.7 mm/min) than in exposed control soils (60.0 mm/min). Soils below silverswords also show greater shear strength (146.1 g/cm²) and compressibility (2.795 kg/cm²) than unprotected soils (36.1 g/cm², and 0.108 kg/cm², respectively). Soil in the plant mounds contains more organic matter; this has influenced other pedological properties, which also differ substantially between sampling positions. Substrate under plants has a porosity ∼ 53% higher than exposed soil, while bulk density is 62% higher in soil outside the plant crown. The observed microtopographic differences are ascribed to greater soil erosion by rainsplash and runoff outside the silversword canopy. The dense rosette crown effectively intercepts raindrops; soils beneath plants also have a high surface cohesiveness provided by a dense network of fine plant rootlets and partially decomposed organic material. Higher runoff rates occur on the less permeable substrate beyond rosettes, which is affected by soil crusting.     

Effects of 30-year-old Aleppo pine plantations on runoff,soil erosion,and plant diversity in a semi-arid landscape in south eastern Spain

Forest management policies in Mediterranean areas have traditionally encouraged land cover changes, with the establishment of tree cover (Aleppo pine) in natural or degraded ecosystems for soil conservation purposes: to reduce soil erosion and to increase the vegetation structure. In order to evaluate the usefulness of these management policies on reduced erosion in semi-arid landscapes, we compared 5 vegetation cover types (bare soil, dry grassland, shrublands, afforested dry grasslands and afforested thorn shrublands), monitored in 15 hydrological plots (8 × 2 m), in the Ventós catchment (Alicante, SE Spain), over 4 years (1996 to 1999). Each cover type represented a different dominant patch of the vegetation mosaic on the north-facing slopes of this catchment. The results showed that runoff coefficients of vegetated plots were less than 1% of the precipitation volume; whereas runoff in denuded areas was nearly 4%. Soil losses in vegetation plots averaged 0.04 Mg ha^− 1 year^− 1 and increased 40-fold in open-land plots. The evaluation of these forest management policies, in contrast with the natural vegetation communities, suggests that: (1) thorn shrublands and dry grassland communities with vegetation cover could control runoff and sediment yield as effectively as Aleppo pine afforestation in these communities, and (2) afforestation with a pine stratum improved the stand's vertical structure resulting in pluri-stratified communities, but reduced the species richness and plant diversity in the understorey of the plantations.