Climatic influences on active fractions of soil organic matter

Biologically active fractions of soil organic matter are important in understanding decomposition potential of organic materials, nutrient cycling dynamics, and biophysical manipulation of soil structure. We evaluated the quantitative relationships among potential C and net N mineralization, soil microbial biomass C (SMBC), and soil organic C (SOC) under four contrasting climatic conditions. Mean SOC values were 28±11 mg g⁻¹ (n=24) in a frigid–dry region (Alberta/British Columbia), 25±5 mg g⁻¹ (n=12) in a frigid–wet region (Maine), 11±4 mg g⁻¹ (n=117) in a thermic–dry region (Texas), and 12±5 mg g⁻¹ (n=131) in a thermic–wet region (Georgia). Higher mean annual temperature resulted in consistently greater basal soil respiration (1.7 vs 0.8 mg CO₂–C g⁻¹ SOC d⁻¹ in the thermic compared with the frigid regions, P<0.001), greater net N mineralization (2.8 vs 1.3 mg inorganic N g⁻¹ SOC 24 d⁻¹, P<0.001), and greater SMBC (53 vs 21 mg SMBC g⁻¹ SOC, P<0.001). Specific respiratory activity of SMBC was, however, consistently lower in the thermic than in the frigid regions (29 vs 34 mg CO₂–C g⁻¹ SMBC d⁻¹, P<0.01). Higher mean annual precipitation resulted in consistently lower basal soil respiration (1.1 vs 1.3 mg CO₂–C g⁻¹ SOC d⁻¹ in the wet compared with the dry regions, P<0.01) and lower SMBC (31 vs 43 mg SMBC g⁻¹ SOC, P<0.001), but had inconsistent effects on net N mineralization that depended upon temperature regime. Specific respiratory activity of SMBC was consistently greater in the wet than the dry regions (≈33 vs 29 mg CO₂–C g⁻¹ SMBC d⁻¹, P<0.01). Although the thermic regions were not able to retain as high a level of SOC as the frigid regions, due likely to high annual decomposition rates, biologically active soil fractions were as high per mass of soil and even 2–3-times greater per unit of SOC in the thermic compared with the frigid regions. These results suggest that macroclimate has a large impact on the portion of soil organic matter that is potentially active, but a relatively small impact on the specific respiratory activity of SMBC.     

Long-term effects of land use and fertiliser treatments on sulphur transformations in soils from the Broadbalk experiment

Sulphur transformations were monitored in a unique set of arable, grassland and woodland soils from the Broadbalk Classical Experiment, which started in 1843. In an open incubation experiment with periodic leaching, 14–35 mg SO₄²⁻-S kg⁻¹ was mineralised in 28 weeks at 25°C, equivalent to 4.4–8.3% soil organic S. Cumulative amounts of S mineralised increased linearly during the 28 weeks, indicating constant rates of mineralisation. The rate of mineralisation was the greatest in the woodland soil (170 μg SO₄-S kg⁻¹ day⁻¹), followed by the grassland (120 μg SO₄-S kg⁻¹ day⁻¹) and the arable soil from the farmyard manure (FYM) plot (110 μg SO₄-S kg⁻¹ day⁻¹). Three soils from arable plots receiving different inorganic fertiliser treatments but no FYM had similar rates of S mineralisation (~70 μg SO₄-S kg⁻¹ day⁻¹). In an incubation experiment with ³⁵SO₄²⁻, addition of glucose greatly enhanced S immobilisation. In 132 days, the woodland and grassland soils immobilised more S than the arable soils, with or without glucose amendment. Immobilisation and mineralisation of S occurred concurrently, and both were stimulated by glucose addition. The results show that S mineralisation and immobilisation were influenced strongly by the type of land-use and long-term organic manuring, whereas annual application of sulphate-containing fertilisers for over 150 years had few effects on short-term S transformations.     

Soil losses due to cassava and sweet potato harvesting: A case study from low input traditional agriculture

Soil loss due to crop harvesting (SLCH) has been established as an important soil erosion process that has significantly contributed to soil degradation in highly mechanised agriculture. This has stimulated the need to investigate the importance of this process of erosion under low input agriculture where, until now, only water and tillage erosion are known as important phenomena causing soil degradation. This study was conducted in Eastern Uganda with the following objectives: (1) to assess the amount of soil lost due to the harvesting of cassava roots and sweet potato tubers under low input agriculture, (2) to look into the factors that influence variations in these soil losses, and (3) to estimate the amount of plant nutrients lost due to SLCH for cassava and sweet potato. Soil sticking to roots and tubers was washed and the soil suspension oven dried to estimate the amount of soil lost after harvesting. Mean annual soil loss for cassava was 3.4 tonnes ha⁻¹ and for sweet potato was 0.2 tonnes ha⁻¹. Ammonium acetate lactate extractable soil nutrient losses for cassava were N = 1.71 kg ha⁻¹ harvest⁻¹, P = 0.16 kg ha⁻¹ harvest⁻¹, K = 1.08 kg ha⁻¹ harvest⁻¹ and for sweet potato were N = 0.14, P = 0.01 kg ha⁻¹ harvest⁻¹, K = 0.15 kg ha⁻¹ harvest⁻¹. Difference in soil loss due to crop harvesting for cassava and sweet potato could be due to: (1) smaller yields of sweet potato leading to smaller soil losses on an area basis, (2) smoother skin and less kinked morphology of sweet potato that allowed less soil to adhere, and (3) the fact that sweet potato is planted in mounds which dry out faster compared to the soil under cassava. Soil moisture content at harvesting time and crop age were significant factors that explained the variations in the soil lost at cassava harvesting. Soil loss under cassava justifies the need to conduct further investigations on this process of soil erosion under low input agriculture.     

Accounting for variability in soil microbial communities of temperate upland grassland ecosystems

This study aimed to determine the factors which regulate soil microbial community organisation and function in temperate upland grassland ecosystems. Soil microbial biomass (C_mic), activity (respiration and potential carbon utilisation) and community structure (phospholipid fatty acid (PLFA) analysis, culturing and community level physiological profiles (CLPP) (Biolog^®)) were measured across a gradient of three upland grassland types; Festuca–Agrostis–Galium grassland (unimproved grassland, National Vegetation Classification (NVC) — U4a); Festuca–Agrostis–Galium grassland, Holcus–Trifolium sub-community (semi-improved grassland, NVC — U4b); Lolium–Cynosurus grassland (improved grassland, NVC — MG6) at three sites in different biogeographic areas of the UK over a period of 1 year. Variation in C_mic was mainly due to grassland type and site (accounting for 55% variance, v, in the data). C_mic was significantly (P<0.001) high in the unimproved grassland at Torridon (237.4 g C m⁻² cf. 81.2 g C m⁻² in semi- and 63.8 g C m⁻² in improved grasslands) and Sourhope (114.6 g C m⁻² cf. in 44.8 g C m⁻² semi- and 68.3 g C m⁻² in improved grasslands) and semi-improved grassland at Abergwyngregyn (76.0 g C m⁻² cf. 41.7 g C m⁻² in un- and 58.3 g C m⁻² in improved grasslands). C_mic showed little temporal variation (v=3.7%). Soil microbial activity, measured as basal respiration was also mainly affected by grassland type and site (n=32%). In contrast to C_mic, respiration was significantly (P<0.001) high in the improved grassland at Sourhope (263.4 l h⁻¹m⁻² cf. 79.6 l h⁻¹m⁻² in semi- and 203.9 l h⁻¹m⁻² unimproved grasslands) and Abergwyngregyn (198.8 l h⁻¹m⁻² cf. 173.7 l h⁻¹m⁻² in semi- and 88.2 l h⁻¹m⁻² unimproved grasslands). Microbial activity, measured as potential carbon utilisation, agreed with the respiration measurements and was significantly (P<0.001) high in the improved grassland at all three sites (A₅₉₀ 0.14 cf. 0.09 in semi- and 0.07 in unimproved grassland). However, date of sampling also had a significant (P<0.001) impact on C utilisation potential (v=24.7%) with samples from April 1997 having highest activity at all three sites. Variation in microbial community structure was due, predominantly, to grassland type (average v=23.6% for bacterial and fungal numbers and PLFA) and date of sampling (average v=39.7% for bacterial and fungal numbers and PLFA). Numbers of culturable bacteria and bacterial PLFA were significantly (P<0.001) high in the improved grassland at all three sites. Fungal populations were significantly (P<0.01) high in the unimproved grassland at Sourhope and Abergwyngregyn. The results demonstrate a shift in soil microbial community structure from one favouring fungi to one favouring bacteria as grassland improvement increased. Numbers of bacteria and fungi were also significantly (P<0.001) higher in August than any other sampling date. Canonical variate analysis (CVA) of the carbon utilisation data significantly (P<0.05) differentiated microbial communities from the three grassland types, mainly due to greater utilisation of sugars and citric acid in the improved grasslands compared to greater utilisation of carboxylic acids, phenolics and neutral amino acids in the unimproved grasslands, possibly reflecting substrate availability in these grasslands. Differences in C_mic, activity and community structure between grassland types were robust over time. In addition, broad scale measures of microbial growth and activity (C_mic and respiration) showed little temporal variation compared to measures of soil microbial community structure, which varied quantitatively with respect to environmental variables (temperature, moisture) and plant productivity, hence substrate supply.     

Relationships between single tree canopy and grass net radiations

It is reported a simple approach to transform daily values of grass net (all-wave) radiation (R_n, MJ m⁻² day⁻¹), as measured over standard grass surface at meteorological stations, into whole tree canopy net radiation (A, MJ tree⁻¹ day⁻¹). The revolving Whirligig device [McNaughton, K.G., Green, S.R., Black, T.A., Tynam, B.R., Edwards, W.R.N., 1992. Direct measurement of net radiation and photosynthetically active radiation absorbed by a single tree. Agric. For. Meteorol. 62, 87–107] describing a sphere about the tree measured A in five trees of different species (walnut, dwarf apple, normal apple, olives and citrus), with leaf area L_A varying from 8.65 to 40 m². For each tree, A and R_n were linearly related (A = bR_n), as previously reported elsewhere, but it was found that the slope of such regression was also a linear function of L_A or, b = 0.303 (±0.032) L_A. Consequently, the hypothesis that total daily tree canopy net radiation per unit leaf area is linearly related to grass net radiation could not be rejected after 86 days of measurements in five locations, and the empirical relationship is A = 0.303 (±0.032) R_nL_A (R² = 0.9306).     

Ratio of PAR to broadband solar radiation measured in Cyprus

The relationship between the two radiant fluxes is studied from almost a 3-year data archive of hourly photosynthetically active photon flux (Q_P) and global solar irradiance (R_S) performed at Athalassa, Cyprus. These data are used to determine temporal variability of the ratio (Q_P/R_S) and its dependence on sky conditions. The seasonal variation of the ratio obtained from daily data ranges from 1.942 E MJ⁻¹ (summer) to 1.892 E MJ⁻¹ (winter) with an annual mean value of 1.919 E MJ⁻¹. The ratio increased from 1.865 to 2.01 E MJ⁻¹ (daily values) or from 1.878 to 2.197 μE J⁻¹ (hourly values), as sky conditions changed from clear to overcast. Effective atmospheric parameters such as sky clearness, brightness and path length were found to cause substantial changes to the PAR fraction.     

Evaluation of an optimal extraction method for measuring d-ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) in agricultural soils and its association with soil microbial CO2 assimilation

Assimilating atmospheric carbon (C) into terrestrial ecosystems is recognized as a primary measure to mitigate global warming. Ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) is the dominant enzyme by which terrestrial autotrophic bacteria and plants fix CO₂. To investigate the possibility of using RubisCO activity as an indicator of microbial CO₂ fixation potential, a valid and efficient method for extracting soil proteins is needed. We examined three methods commonly used for total soil protein extraction. A simple sonication method for extracting soil protein was more efficient than bead beating or freeze–thaw methods. Total soil protein, RubisCO activity, and microbial fixation of CO₂ in different agricultural soils were quantified in an incubation experiment using ¹⁴C-CO₂ as a tracer. The soil samples showed significant differences in protein content and RubisCO activity, defined as nmol CO₂ fixed g⁻¹ soil min⁻¹. RubisCO activities ranged from 10.68 to 68.07 nmol CO₂ kg⁻¹ soil min⁻¹, which were closely related to the abundance of cbbL genes (r = 0.900, P = 0.0140) and the rates of microbial CO₂ assimilation (r = 0.949, P = 0.0038). This suggests that RubisCO activity can be used as an indicator of soil microbial assimilation of atmospheric CO₂.     

Carbon loss by sclerotia of Sclerotium rolfsii under the influence of soil pH,temperature and matric potential and its effect on sclerotial germination and virulence

Germinability and virulence of sclerotia of Sclerotium rolfsii were assessed after 50 days of exposure of ¹⁴C-labeled sclerotia to soil at 0, −5 and −15 kPa and pH 6.9, or to soil at 15, 25 or 30 °C, pH 5 or 8 and −1 kPa. Evolution of ¹⁴CO₂ accounted for the greatest share of endogenous carbon loss from sclerotia under all soil conditions, except in water-saturated soil (0 kPa), in which sclerotial exudates contributed the major share of carbon loss. Total evolution of ¹⁴CO₂ from sclerotia in soil at −15 kPa (42.4% of total ¹⁴C) and at −5 kPa (38%) was significantly higher than at 0 kPa (23.8%). Evolution of ¹⁴CO₂ in soil at 25 or 30 °C was more rapid than at 15 °C with regardless of pH. Loss of endogenous carbon by sclerotia was the greater after 50 days of exposure to soil at 0 kPa, or at 25 or 30 °C and pH 8, than at other soil conditions. Sclerotia exposed to water-saturated soil (0 kPa) showed a more rapid decline in nutrient independent germinability, viability and virulence, than to those exposed to −5 or −15 kPa. Sclerotia became dependent on nutrient for germination and lost viability and virulence within 30–40 days in soil at 25 or 30 °C, pH 8. However, more than 60% of sclerotia retained viability in soil at 15 °C regardless of pH, even after 50 days. Radish shoot growth was increased significantly by the sclerotia that had been exposed to soil at 0 kPa, or to soil at 25 or 30 °C and pH 8 for 50 days. In conclusion, carbon loss by sclerotia during incubation on soil at different pH levels, temperatures and water potentials was inversely correlated with sclerotial ability to infect radish seedlings. The relationship between carbon loss by sclerotia and radish shoot length was positive.     

Comparison of the eddy covariance and automated closed chamber methods for evaluating nocturnal CO2 exchange in a Japanese cypress forest

Underestimation of nocturnal CO₂ respiration using the eddy covariance method under calm conditions remains an unsolved problem at many flux observation sites in forests. To evaluate nocturnal CO₂ exchange in a Japanese cypress forest, we observed CO₂ flux above the canopy (F_c), changes in CO₂ storage in the canopy (S_t) and soil, and trunk and foliar respiration for 2 years (2003–2004). We scaled these chamber data to the soil, trunk, and foliar respiration per unit of ground area (F_s, F_t, F_f, respectively) and used the relationships of F_s, F_t, and F_f with air or soil temperature for comparison with canopy-scale CO₂ exchange measurements (=F_c + S_t). The annual average F_s, F_t, and F_f were 714 g C m⁻² year⁻¹, 170 g C m⁻² year⁻¹, and 575 g C m⁻² year⁻¹, respectively. At small friction velocity (u_*), nocturnal F_c + S_t was smaller than F_s + F_t + F_f estimated using the chamber method, whereas the two values were almost the same at large u_*. We replaced F_c + S_t measured during calm nocturnal periods with a value simulated using a temperature response function derived during well-mixed nocturnal periods. With this correction, the estimated net ecosystem exchange (NEE) from F_c + S_t data ranged from −713 g C m⁻² year⁻¹ to −412 g C m⁻² year⁻¹ in 2003 and from −883 g C m⁻² year⁻¹ to −603 g C m⁻² year⁻¹ in 2004, depending on the u_* threshold. When we replaced all nocturnal F_c + S_t data with F_s + F_t + F_f estimated using the chamber method, NEE was −506 g C m⁻² year⁻¹ and −682 g C m⁻² year⁻¹ for 2003 and 2004, respectively.     

Nitrogen fertilization and cropping systems effects on soil organic carbon and total nitrogen pools under chisel-plow tillage in Illinois

Agricultural soils can be a major sink for atmospheric carbon (C) with adoption of recommended management practices (RMPs). Our objectives were to evaluate the effects of nitrogen (N) fertilization and cropping systems on soil organic carbon (SOC) and total N (TN) concentrations and pools. Replicated soil samples were collected in May 2004 to 90 cm depth from a 23-year-old experiment at the Northwestern Illinois Agricultural Research and Demonstration Center, Monmouth, IL. The SOC and TN concentrations and pools, soil bulk density (ρ_b) and soil C:N ratio were measured for five N rates [0 (N₀), 70 (N₁), 140 (N₂), 210 (N₃) and 280 (N₄) kg N ha⁻¹] and two cropping systems [continuous corn (Zea mays L.) (CC), and corn–soybean (Glycine max (L.) Merr.) rotation (CS)]. Long-term N fertilization and cropping systems significantly influenced SOC concentrations and pools to 30 cm depth. The SOC pool in 0–30 cm depth ranged from 68.4 Mg ha⁻¹ for N₀ to 75.8 Mg ha⁻¹ for N₄. Across all N treatments, the SOC pool in 0–30 cm depth for CC was 4.7 Mg ha⁻¹ greater than for CS. Similarly, TN concentrations and pools were also significantly affected by N rates. The TN pool for 0–30 cm depth ranged from 5.36 Mg ha⁻¹ for N₀ to 6.14 Mg ha⁻¹ for N₄. In relation to cropping systems, the TN pool for 0–20 cm depth for CC was 0.4 Mg ha⁻¹ greater than for CS. The increase in SOC and TN pools with higher N rates is attributed to the increased amount of biomass production in CC and CS systems. Increasing N rates significantly decreased ρ_b for 0–30 cm and decreased the soil C:N ratio for 0–10 cm soil depth. However, none of the measured soil properties were significantly correlated with N rates and cropping systems below 30 cm soil depth. We conclude that in the context of developing productive and environmentally sustainable agricultural systems on a site and soil specific basis, the results from this study is helpful to strengthening the database of management effects on SOC storage in the Mollisols of Midwestern U.S.     

Miscanthus sinensis and wild flowers as food resources of Lumbricus terrestris L.

Senescent leaves of Miscanthus sinensis contained 36% soluble polysaccharides, 26% cellulose and had a C/N ratio of 45. In 11 wild flower species contents of soluble polysaccharides (21–30%), cellulose (3–16%) and C/N ratio (13–31) were lower. Decomposing leaves of M. sinensis lost weight at a rate of 0.002 day⁻¹, increased the C/N ratio from 45 to about 100, the bacterial biomass from 0.4 to 1 μg C mg⁻¹ dry weight, and decreased the tensile strength from 35 to 10 N. The withdrawal rate of Lumbricus terrestris with senescent leaves of M. sinensis was 30 mg g⁻¹ week⁻¹; the feeding rate was lower. With most senescent wild flowers withdrawal and feeding rates were higher. During decomposition of M. sinensis withdrawal rates increased to about 90, and feeding rates to about 30 mg g⁻¹ week⁻¹. The rates were not related to soluble polysaccharides, cellulose, acid-insoluble residue, C/N ratio and the presence of trichomes on the leaves. The abundance of L. terrestris decreased in a meadow turned into a field of M. sinensis from 55 to 26 earthworms m⁻² and increased in a rotational maize field turned into wild flower strips from 28 to 46 earthworms m⁻². The species richness of earthworms decreased with M. sinensis from 7.2 to 4.7 and increased with wild flowers from 4.7 to 6.7 species per sampling unit.     

Emission of carbon dioxide and dynamics of inorganic N in a gradient of alkaline saline soils of the former lake Texcoco

A plan was developed to apply biosolid to soil of the former lake Texcoco to fertilize the pioneer vegetation. Because, no information exists about how differences in electrolytic conductivity (EC) might affect mineralization of biosolid and dynamics of C and N in soil, 20 soil samples forming a gradient in EC ranging from 22 to 150 dS m⁻¹ were characterized, amended with 500 mg biosolid C kg⁻¹ dry soil and incubated aerobically at 22 ± 2 °C while production of CO₂, concentrations of ammonium (NH₄⁺), nitrite (NO₂⁻), and nitrate (NO₃⁻), and NH₃ volatilization were monitored at 22 ± 2 °C for 70 days. Soil characteristics showed large variations with maximum values often >10-times larger than minimum values. The production of CO₂ in the unamended soil ranged from 25 to 159 mg CO₂-C kg⁻¹ day⁻¹ and NH₃ volatilization from 0 to 189 μg NH₃-N kg⁻¹ day⁻¹_. Application of biosolid increased production of CO₂ significantly 1.4-fold and volatilization of NH₃ 11.5-fold. The EC explained most of the variation in production of CO₂, while particle size distribution explained most of the variation in volatilization of NH₃. The concentration of NH₄⁺ in the biosolid-amended soil decreased sharply in the first 14 days, with the EC explaining most of the variation found, and remained constant thereafter with a small increase at day 70. Significant increases in the concentration of NO₃⁻ were generally found in soil with EC < 64 dS m⁻¹. The EC explained most of the variation in production of CO₂, and dynamics of NH₄⁺ and NO₃⁻ while clay positively and sand content negatively affected NH₃ volatilization. It was found that increases in EC inhibited C and N mineralization in soil of the former lake Texcoco.     

Impact of high cadmium and nickel soil concentration on selected physiological parameters of Arundo donax L.

The purpose of this study was to investigate the effects of high cadmium and nickel soil concentrations on selected physiological parameters of Arundo donax L. A 2-year pot experiment was held in the field and the pots were irrigated with aqueous solutions of Cd and Ni in concentrations of 5, 50 and 100 ppm, against the control (tap water). At the end of the cultivation periods the pots soil was divided into three equal zones and total and NH₄OAc extractable Cd and Ni concentrations were determined. The top zone exhibited the highest metal content. Cadmium and nickel total concentrations at the end of the experiment were up to 973.8 mg kg⁻¹ and 2543.3 mg kg⁻¹ respectively, while NH₄OAc extractable Cd was up to 291.7 mg kg⁻¹ and Ni up to 510.3 mg kg⁻¹. Stomatal conductance ranged between 0.3 and 0.8 mol CO₂ m⁻² s⁻¹, intercellular CO₂ concentration ranged between 212.9 and 243.0 ppm CO₂, stomatal resistance between 0.6 and 1.3 s cm⁻¹, chlorophyll content (SPAD values) between 46.3 and 57.0 and chlorophyll fluorescence (F_v/F_m) ranged between 0.8 and 0.9. All studied physiological parameters did not show statistically significant differences among control and heavy metal treated plants for both years; therefore, high soil cadmium and nickel concentration did not inhibit stomatal opening and did not affect the function of the photosynthetic machine of A. donax plants.     

Soil available phosphorus status determines indigenous mycorrhizal colonization of field and glasshouse-grown spring wheat from Argentina

Wheat production (Triticum aestivum L.) has increased across the world during last century with the intensification of agriculture. Phosphorus (P) fertilization is a common practice to improve wheat growth in Argentina. We investigate whether indigenous arbuscular mycorrhizal colonization (AMC) of hard red spring wheat is controlled by shoot P content (SPc) or by available soil P in an agricultural soil from the southeastern Argentine Pampas. In the field, AMC was monitored four times during two growing seasons of a conventional wheat crop. Treatments were: without P supply, annual supply of 11 and 22 kg P ha⁻¹ during the last 5 years, and 164 kg P ha⁻¹ applied once 5 years before the experiment. In the glasshouse, AMC was assessed three times in wheat growing in pots filled with the soil from unfertilized plots; treatments were: P (0 and 20 mg P pot⁻¹), and nitrogen (N) fertilization (0 and 150 mg N pot⁻¹). A range of soil P between 6 and 60 mg P kg⁻¹ was obtained and the AMC ranged from 1% to 67% of root length colonized under both field and glasshouse conditions. P supplied annually increased growth and SPc but decreased AMC. N fertilization did not affect growth or AMC. Variations in SPc did not account for AMC. Variability in AMC was best accounted for local current soil available P content (r² = 0.59). A linear-plateau relationship between soil P and indigenous AMC was established in wheat plants growing under contrasting environmental and experimental (field and glasshouse) conditions. Indigenous AMC was depressed by available soil P in the range 0–27 mg P kg⁻¹ (a decrease of 2.8% mg P⁻¹ kg⁻¹). Above 27 mg P kg soil⁻¹, AMC was stabilized at about 10%. Grain yield increased with fertilization and the highest relative shoot dry matter in field was obtained at 15.5 mg P kg soil⁻¹. The soil P range that ensures high wheat production without deterring indigenous AMC is discussed.     

Rapid estimation of microbial biomass in grassland soils by ultra-violet absorbance

A reliable and simple technique for estimating soil microbial biomass (SMB) is essential if the role of microbes in many soil processes is to be quantified. Conventional techniques are notoriously time-consuming and unreproducible. A technique was investigated that uses the UV absorbance at 280 nm of 0.5 M K₂SO₄ extracts of fumigated and unfumigated soils to estimate the concentrations of carbon, nitrogen and phosphorus in the SMB. The procedure is based on the fact that compounds released after chloroform fumigation from lysed microbial cells absorb in the near UV region. Using 29 UK permanent grassland soils, with a wide range of organic matter (2.9–8.0%) and clay contents (22–68%), it was demonstrated that the increase in UV absorbance at 280 nm after soil fumigation was strongly correlated with the SMB C (r=0.92), SMB N (r=0.90) and SMB P (r=0.89), as determined by conventional methods. The soils contained a wide range of SMB C (412–3412 μg g⁻¹ dry soil), N (57–346 μg g⁻¹ dry soil) and P (31–239 μg g⁻¹ dry soil) concentrations. It was thus confirmed that the UV absorbance technique described was a rapid, simple, precise and relatively inexpensive method of estimating soil microbial biomass.     

Detection of water stress in an olive orchard with thermal remote sensing imagery

An investigation of the detection of water stress in non-homogeneous crop canopies such as orchards using high-spatial resolution remote sensing thermal imagery is presented. An airborne campaign was conducted with the Airborne Hyperspectral Scanner (AHS) acquiring imagery in 38 spectral bands in the 0.43–12.5 μm spectral range at 2.5 m spatial resolution. The AHS sensor was flown at 7:30, 9:30 and 12:30 GMT in 25 July 2004 over an olive orchard with three different water-deficit irrigation treatments to study the spatial and diurnal variability of temperature as a function of water stress. A total of 10 AHS bands located within the thermal-infrared region were assessed for the retrieval of the land surface temperature using the split-window algorithm, separating pure crowns from shadows and sunlit soil pixels using the reflectance bands. Ground truth validation was conducted with infrared thermal sensors placed on top of the trees for continuous thermal data acquisition. Crown temperature (T_c), crown minus air temperature (T_c − T_a), and relative temperature difference to well-irrigated trees (T_c − T_R, where T_R is the mean temperature of the well-irrigated trees) were calculated from the ground sensors and from the AHS imagery at the crown spatial resolution. Correlation coefficients for T_c − T_R between ground IRT sensors and airborne image-based AHS estimations were R² = 0.50 (7:30 GMT), R² = 0.45 (9:30 GMT) and R² = 0.57 (12:30 GMT). Relationships between leaf water potential and crown T_c − T_a measured with the airborne sensor obtained determination coefficients of R² = 0.62 (7:30 GMT), R² = 0.35 (9:30 GMT) and R² = 0.25 (12:30 GMT). Images of T_c − T_a and T_c − T_R for the entire field were obtained at the three times during the day of the overflight, showing the spatial and temporal distribution of the thermal variability as a function of the water deficit irrigation schemes.     

Impact of carbon-rich dairy factory effluent on growth of perennial ryegrass (Lolium perenne) and soil microorganisms

A pot experiment was conducted to investigate the impact of high carbon dairy factory effluent application on the growth of perennial ryegrass (Lolium perenne L.), plant nutrient uptake, soil microbial biomass carbon and nitrogen, populations of soil-microorganisms, root colonising fungi and the microbial functional diversity. The effluent was added at rates of 0, 100,000, 200,000 and 300,000 l ha^–1. These rates are equivalent to 0, × 1, × 2 and × 3 normal field application rates. The added effluent contained (g l^–1), C; 19.42, total P; 0.65; S, 0.75, K; 1.33, Na; 4.55, Mg; 0.11, NH₄; 0.073, total N; 0.073 and had a pH of 4.33. Replicate pots (incubated in a controlled-environment room at 20 °C, with 16 h light/8 h dark) were harvested at 32, 61, and 130 days after setting up of the experiment. In the first sampling, shoot dry matter levels declined significantly (P < 0.01) with increased effluent. By the third sampling the trend was reversed with treated pots having greater amounts of shoot dry matter. The initial depression of growth was possibly due to a combination of factors including excess levels of available carbon (C) for microbes leading to immobilisation of nutrients, particularly nitrogen (N) and sulphur (S). Shoot N and S concentrations were lower (P < 0.001) and the phosphorus concentrations were higher in effluent-treated samples. Soil microbial biomass-C (480 and 770 μg g⁻¹ of biomass C in untreated and treated soil, respectively) and microbial-N (81 and 123 μg g^–1 of microbial-N in untreated and treated soil, respectively) were significantly (P < 0.001) greater in effluent-treated pots at all times. Populations of total culturable bacteria were higher (P < 0.01) in the treated pots in the first sample (log₁₀ populations g^–1 were 7.3 in untreated pots compared to 8.0 averaged across three treatments) but there were no differences in the subsequent two samples. Effluent also increased yeast populations (log₁₀ numbers g^–1 were 0.6 in untreated pots and 3.1 in treated pots averaged across treatments and times P < 0.01) at all three sampling times. The Shannon-Weiner Diversity Index of root fungi decreased with increasing effluent application (P < 0.01) while the species richness decreased with effluent as well as with time (P < 0.1). Potential root pathogens Fusarium oxysporum, total Fusarium spp. and Pythium spp. significantly increased (P < 0.05) in treated samples but in the final sampling, Codinaea fertilis significantly (P < 0.05) decreased with effluent treatment. The microbial functional diversity pattern and the average well colour development (AWCD) in soil were significantly changed by the effluent application but effects were not detectable after 130 days.     

Applying an oxygen-based respiratory assay to assess soil microbial responses to substrate and N availability

Documented approaches for measuring soil microbial activities and their controlling factors under field conditions are needed to advance understanding of soil microbial processes for numerous applications. We manipulated field plots with carbon (C) and nitrogen (N) additions to test the capability of a respiratory assay to: (1) measure respiration of endogenous soil C in comparison to field-measured CO₂ fluxes; (2) determine substrate-induced respiratory (SIR) activities that are consistent with substrate availability in the field; and, (3) report N availability in the field based on assay responses with and without added N. The respiratory assay utilizes a microplate containing an oxygen-sensitive fluorescent ruthenium dye. Respiratory activities measured with this approach have previously been shown to occur within short (6–8 h) incubation periods using low substrate concentrations that minimize enrichment during the assay. Field treatments were conducted in a randomized full-factorial design with C substrate (casamino acids, glucose, or none) and inorganic N (±) as the treatment factors. With one exception, we found that respiration of endogenous soil C in the assay responded to the field treatments in a similar manner to CO₂ fluxes measured in the field. Patterns of SIR with low concentrations of added amino acid or carbohydrate substrate (200 μg C g⁻¹ soil) were consistent with field treatments. The ratio (N_ratio) of carbohydrate respiration with added N (25 μg N g⁻¹ soil) to the same without N in the assay was significantly (P < 0.05) decreased by field N amendment. The carbohydrate N_ratio exhibited a logarithmic relationship (r = 0.64, P < 0.05) with extractable inorganic soil nitrate and ammonium concentrations. These data significantly extend and support the capability of this oxygen-based respiratory assay to evaluate in situ soil activities and examine factors that limit these activities.     

Earthworm communities and soil properties in shaded coffee plantations with and without application of glyphosate

In central Veracruz, Mexico, many coffee plantations are managed using agrochemicals for weed control, with glyphosate-based herbicides (GBH) the most commonly used. To date, however, no studies in this region have characterized the soil biological and physicochemical properties in coffee plantations under such glyphosate application. In this study, earthworms were used as bioindicator organisms by measuring differences in the earthworm community in plots within shaded coffee plantations, with and without repeated applications of glyphosate. Differences in earthworm-induced soil processes, such as water infiltration rates, potential net carbon mineralization rates and soil physicochemical properties were also evaluated. Eight plots were selected in shaded coffee plantations; four had received regular applications of GBH over the preceding 22 years, while the other four had received no herbicides over the preceding 7 years. The earthworm species found in plots with no GBH treatment were Pontoscolex corethrurus (99%) and Amynthas corticis (1%), while A. corticis was absent in plots that had been treated with GBH. Significant differences (P < 0.01) in earthworm density (168 ± 16 and 353 ± 37 ind m⁻²) and biomass (22.7 ± 1.1 and 45.4 ± 6.9 g m⁻²) were observed in soils with and without GBH, respectively. No significant difference (P = 0.08) was observed in the water infiltration rate (2 × 10⁻⁴ ± 4 × 10⁻⁵ and 4 × 10⁻⁴ ± 1 × 10⁻⁴ cm s⁻¹ with and without GBH, respectively). Soil carbon flow was greater in plots with GBH (76 ± 7 μg dry soil⁻¹ d⁻¹) than in those without GBH (62 ± 1 μg dry soil⁻¹ d⁻¹, P < 0.005). Significant differences (P < 0.05) were found in pH and in the clay, silt and Ca content of the soil. Our findings indicated reduced species number, density and biomass of earthworms, and increased net carbon mineralization rate in plots with GBH. The plots managed with glyphosate presented a negative effect on the earthworm parameters measured, and we conclude that the earthworms therefore acted as indicators of perturbation. It is also possible that this effect could be due to factors unrelated to the glyphosate that were not considered in this study, such as chemical fertilization or legume litter spatial variability, among others.     

Microbial properties and soil respiration in submontane forests of Venezuelian Guyana: characteristics and response to fertilizer treatments

The distribution of vegetation types in Venezuelan Guyana (in the ‘Canaima’ National Park) represents a transitional stage in a long term process of savannization, a process considered to be conditioned by a combined chemical and intermittent drought stress. All types of woody vegetation in this environment accumulate large amounts of litter and soil organic carbon (SOC). We hypothesized that this accumulation is caused by low microbial activity. During 1 year we measured microbial biomass carbon (Cmic), microbial respiration and soil respiration of stony Oxisols (Acrohumox) at a tall, a medium and a low forest and with three chemical modifications of site conditions by the addition of NO₃⁻, Ca²⁺ and PO₄³⁻ as possible limiting elements. Due to high SOC contents, mean Cmic was 1 mg g soil⁻¹ in the mineral topsoil and 3 mg g soil⁻¹ in the forest floor. Mean microbial respiration in the mineral topsoil and the forest floor were 165 and 192 μg CO₂-C g soil⁻¹ d⁻¹, respectively. We calculated high mean metabolic quotients (qCO₂) of 200 mg CO₂-C g Cmic⁻¹ d⁻¹ in the litter layer and 166 mg CO₂-C g Cmic⁻¹ d⁻¹ in the mineral topsoil, while the Cmic-to-SOC ratios were as low as 1.0% in the litter layer and 0.8% in the mineral topsoil. Annual soil respiration was 9, 12 and 10 Mg CO₂-C ha⁻¹ yr⁻¹ in the tall, medium and low forest, respectively. CO₂ production was significantly increased by CaHPO₄ fertilization, but no consistent effects were caused by Ca²⁺ and NO₃⁻, fertilization. Our findings indicate that Cmic and microbial respiration are reduced by low nutrient concentrations and low litter and SOC quality. Reduced microbial decomposition may have contributed to SOC accumulation in these forests.