The role of crop waste and soil in Pseudomonas syringae pathovar porri infection of leek (Allium porrum)

Pseudomonas syringae pv. porri, the causal agent of bacterial blight of leek, is a current threat for leek (Allium porrum) production in the Netherlands. The roles of post-harvest crop waste and plant invasion from soil in leek plant infection was investigated with the purpose to gain better understanding on the ecology and epidemiology of this pathogen. In a survey done over 167 leek fields, P. syringae pv. porri was present in 101 fields. About a tenfold higher P. syringae pv. porri average infection rate was recorded in leek plants from fields where post-harvest crop waste was returned than in those from fields where no waste was returned. P. syringae pv. porri could survive for at least 1 month in shredded plant material made from infected plants (mimicking crop waste in practice). Field experiments done over three successive years revealed that leek plants that were treated with crop waste at the nursery and production growth stages consistently showed higher infection rates than plants that remained untreated. Plants that were treated with crop waste only at one of both stages revealed intermediate infection rates. In a plant–soil microcosm study, it appeared that P. syringae pv. porri strain P55R colony numbers in the leek rhizosphere were approximately 4 orders in magnitude higher than in corresponding bulk soils. P. syringae pv. porri was shown to colonize leek roots and cells of the pathogen were also present in the leaves. It was concluded that post-harvest crop waste play an important role in the epidemiology of P. syringae pv. porri in leek production. The following route for primary infection of leek plants is proposed, from crop plant residues via soil to leek roots and plants.     

Impact of different green manures on the content of S-alk(en)yl-L-cysteine sulfoxides and L-ascorbic acid in leek (Allium porrum)

This field study investigated the impact of various fertilization strategies with red clover ( Trifolium pratense L.) green manure on the levels of S-alk(en)yl- l-cysteine sulfoxides (ACSO) and l-ascorbic acid in leek. Two of the 12 treatments were controls, one without fertilizers and the other with a commercial mineral fertilizer. The remaining 10 treatments were different forms and quantities of green manure prepared from red clover. One treatment consisted of direct incorporation into soil of the preceding red clover crop. The other 9 treatments comprised three types of red clover green manure [anaerobically digested red clover biomass (biodigestate), composted red clover, fresh red clover as mulch] applied at three different doses. Yield was increased only at the highest dose of compost and the highest dose of mulch. High doses of green manure decreased dry matter content in leek. The fertilizer treatments increased the nitrogen uptake and the nitrogen content of leek. Sulfur uptake and sulfur levels were increased only by the mineral fertilizer and by the compost. Nonfertilized leek contained 20.4 +/- 5.8 g/kg of dry weight (dw) ACSOs as determined by LC-MS/MS and 1.57 +/- 0.01 g/kg of dw ascorbic acid as determined by HPLC. The ACSOs were to 92-96% isoalliin, the rest being methiin. Alliin was identified in only 1 of 72 samples. The ACSO level was increased by 37% by the mineral fertilizer. Whereas direct incorporation of red clover, mulch, and red clover biodigestate had no influence on the ACSO level, the highest dose of compost increased the ACSO level by 55%. Ascorbic acid levels were not influenced by the mineral treatment. Green manures increased ascorbic acid levels only on a dry weight basis. A high correlation between the content of sulfur and ACSO indicated that delivering capacity of sulfur from the manure to the plant strongly affected the ASCO content of the leek. In conclusion, the composted green manure was the most useful organic fertilizer in this study and reached at least the efficiency of the mineral fertilizer.     

Organochlorine pesticide residues in strawberries from integrated pest management and organic farming

A rapid, specific, and sensitive method based on the Quick Easy Cheap Effective Rugged and Safe (QuEChERS) method and a cleanup using dispersive solid-phase extraction with MgSO(4), PSA, and C18 sorbents has been developed for the routine analysis of 14 pesticides in strawberries. The analyses were performed by three different analytical methodologies: gas chromatography (GC) with electron capture detection (ECD), mass spectrometry (MS), and tandem mass spectrometry (MS/MS). The recoveries for all the pesticides studied were from 46 to 128%, with relative standard deviation of <15% in the concentration range of 0.005-0.250 mg/kg. The limit of detection (LOD) for all compounds met maximum residue limits (MRL) accepted in Portugal for organochlorine pesticides (OCP). A survey study of strawberries produced in Portugal in the years 2009-2010 obtained from organic farming (OF) and integrated pest management (IPM) was developed. Lindane and β-endosulfan were detected above the MRL in OF and IPM. Other OCP (aldrin, o,p'-DDT and their metabolites, and methoxychlor) were found below the MRL. The OCP residues detected decreased from 2009 to 2010. The QuEChERS method was successfully applied to the analysis of strawberry samples.     

Phosphorus (P) Uptake mechanisms of crops grown in soils with low P status

In our previous studies, pigeonpea (Cajanus cajan L.), groundnut (Arachis hypogaea L.), and rice (Oryza sativa L.) were found to have a higher ability to take up Fe- or Al-bound phosphorus (P) than soybean (Glycine max L.) and sorghum (Sorghum bicolor L.). Phosphorus absorption characteristics like I _max, K _m, C _min, and Fe^III reduction activity of roots, and root exudates in various crops were examined with a view to analyzing the mechanisms of P uptake. Phosphorus uptake ability was largely unrelated to variations in I _max, K _m, C _min, and Fe^III reduction activity of roots. Phosphorus-solubilizing activity in anionic fractions of root exudates was detected in pigeonpea but not in rice or groundnut. Malonic acid was the major component followed by oxalic and piscidic acid. These organic acids were able to release P from FePO₄ and A1PO₄. The higher P uptake ability of pigeonpea in soils with low P fertility presumably depends on the secretion of such organic acids from roots.     

十氯酮污染土壤上根茎作物收割部分的污染状况

A bacterial strain, Arthrobacter oxydans (B4), capable of degrading benzo[a]pyrene (BaP) in water body, was isolated from a polycyclic aromatic hydrocarbons-contaminated site. Effects of different factors, such as reaction time, pH value, temperature and organic nutrients, on BaP biodegradation by the strain B4 were studied. After 5 d treatment, the concentration of BaP in mineral salts medium was reduced to 0.318 mg L-1 , compared to the initial concentration of 1.000 mg L-1 . There was a process of acid formation during the degradation with pH falling from initial 7.01 to 4.61 at 5 d, so keeping the water body under slightly alkaline condition was propitious to BaP degradation. Strain B4 efficiently degraded BaP at 20 to 37 ℃ with addition of organic nutrients. The biodegradation and transformation of BaP mainly occurred on cell surfaces, and extracellular secretions played an important role in these processes. Fourier transform infrared spectroscopy and gas chromatograph-mass spectrometer analyses of metabolites showed that ring cleavage occurred in the BaP degradation process and the resulting metabolically utilizable substrates were generated as sole carbon sources for B4 growth. Furthermore, mineralization extent of metabolites was verified by determining the total organic carbon and inorganic carbon in the degradation system.     

农产品/食品中农药残留快速检测方法研究进展

农药残留的识别和量化通常依赖于气相色谱法、高效液相色谱法、气/液相色谱-质谱联用法以及毛细管电泳法,这些方法需涉及大而贵重的仪器、费时的样品处理以及专门的技术培训。因此,建立在线、高灵敏度、高选择性、简单高效、低成本的农药残留快速检测方法和技术非常重要。该文综述了用于农产品/食品的农药残留分析快速检测方法,主要包括酶抑制法、免疫分析法、光谱法(包括可见/近红外、红外、拉曼和激光诱导击穿光谱等)以及各种生物传感器等,分别介绍了这些方法最新的研究进展,同时分析并总结了这些快速检测方法和技术的基本原理和特点。目前的研究在灵敏度、重复性、准确性方面存在着一些不足,商品化的农药残留检测仪器也比较单一。由于纳米生物技术、分子印迹技术和微流控技术等技术有着巨大的应用潜力,因此特别介绍了这些技术在农药残留分析中的应用。农药残留快速分析技术未来将会朝着检测仪器的小型化和集成化、多通道检测、无线通讯方向发展,提高快速检测方法和仪器的稳定性和可靠性是必然趋势。     

Organochlorine pesticide and PCB contents in otter (Lutra lutra) scats from western Scotland

Organochlorine pesticide residues and PCBs were measured in 113 otter (Lutra lutra) scat samples from 94 sites in the River Clyde catchment, its estuary and neighboring coastal waters in western Scotland. Contents of pesticide residues were generally low. PCB amounts were high in some regions in the study area (geometric mean contents up to 19.5 mg kg^?1 lipid). Potential sources of contamination included industrial areas, a sewage sludge dump and shipping facilities, both naval and commercial. PCBs in tissues were estimated from scats. Analysis of scats provides a useful technique of estimating potential contamination threats to otter populations and can be used to identify biologically significant hot-spots of contamination which may be missed by more familiar surveillance methods.     

Utilization by wheat crops of nitrogen from legume residues decomposing in soils in the field

Ground ¹⁵N-labelled legume material (Medicago littoralis) was mixed with topsoils in confined microplots in the field, and allowed to decompose for 7 and 5 months in successive years (1979, 1980) before sowing wheat. The soil cropped in 1979 (and containing ¹⁵N-labelled wheat roots and legume residues) was cropped again in 1980.The results support evidence that ungrazed legume residues, incorporated in amounts commonly found in southern Australian wheat growing regions, contribute only a little to soil available N and to crop N uptake, even in the first year of their decomposition. Thus mature first crops of wheat, although varying greatly in dry matter yield (2.9-fold) and total N uptake (2.4-fold), took up only 27.8 and 20.2% of the legume N applied at 48.4 kg ha^?1, these corresponding to 6.1 and 10.8% of the N of the wheat crops. The availability of N from medic residues to a second wheat crop declines to <5% of input. For both first and second wheat crops, uptake of N from legume residues was approximately proportional to legume N input over the range 24.2 to 96.8 kg ha ^?1.The proportional contributions of medic N to soil inorganic N, N released in mineralization tests, and to wheat crop N, differed between seasons and soils, but for a given crop did not significantly differ between tillering, flowering and maturity. In both years, grain accounted for 52–65% of the total ¹⁵N of first crops, roots for < 5–6%. In neither year did the amounts of N or ¹⁵N in the tops change significantly between flowering and maturity, despite a gain in tops dry matter in 1979; by contrast N and ¹⁵N of roots decreased significantly during ripening in both years. Wheat plants at tillering contained about 75% of the N and ¹⁵N taken up at flowering. The amounts of legume-derived ¹⁵N in mature first wheat crops were equivalent to 82–88% of the amounts of inorganic ¹⁵N in the soil profiles at sowing. Wheat straw added at the rate of 2.5 t ha^?1, 2 months before sowing, decreased the uptake of N (15%) and ¹⁵N (18%) by wheat in a nitrogen responsive season.     

Exchangeable ammonium and nitrate from different nitrogen fertilizer preparations in polyacrylamide-treated and untreated agricultural soils

 High molecular weight, anionic polyacrylamide (PAM) is currently being used as an irrigation water additive to significantly reduce soil erosion associated with furrow irrigation. PAM contains amide-N, and PAM application to soils has been correlated with increased activity of soil enzymes, such as urease and amidase, involved in N cycling. Therefore we investigated potential impacts of PAM treatment on the rate at which fertilizer N is transformed into NH₄ ⁺ and NO₃ ^– in soil. PAM-treated and untreated soil microcosms were amended with a variety of fertilizers, ranging from common rapid-release forms, such as ammonium sulfate [(NH₄)₂SO₄] and urea, to a variety of slow-release formulations, including polymerized urea and polymer-encapsulated urea. Ammonium sulfate was also tested together with the nitrification inhibitor dicyandiamide (DCD). The fertilizers were applied at a concentration of 1.0 mg g^–1, which is comparable to 100 lb acre^–l, or 112 kg ha^–1. Potassium chloride-extractable NH₄ ⁺-N and NO₃ ^–-N were quantified periodically during 2–4 week incubations. PAM treatment had no significant effect on NH₄ ⁺ release rates for any of the fertilizers tested and did not alter the efficacy of DCD as a nitrification inhibitor. However, the nitrification rate of urea and encapsulated urea-derived NH₄ ⁺-N was slightly accelerated in the PAM-treated soil. Received: 16 January 1998     

Mobilization of phosphorus contributes to positive rotational effects of leguminous cover crops on maize grown on soils from northern Nigeria

Previous research has demonstrated a positive rotational effect of tropical leguminous cover crops on maize growth on a luvisol from Nigeria. This effect could not be explained by a better N supply. The objective of the present work was to further clarify whether improved P nutrition has been a contributing factor. Nine cover crops and maize were studied in nutrient solution‐culture with 1 and 20 μM P and with NO₃‐N as N source for root physiological parameters that may affect P mobilization. Zea mays, Lablab purpureus, and Centrosema pubescens responded to P deficiency by higher rates of proton excretion. Clitoria ternatea excreted OH^— with only small differences due to P nutrition. At low P supply, Chamaecrista rotundifolia, Clitoria, and Centrosema had the highest exudation rates of organic acid anions, especially citrate and malate. A major difference between plant species was found in root‐surface acid phosphatase activity. Cajanus cajan expressed the highest phosphatase activity. V_max of P uptake increased markedly under P deficiency, particularly for maize. Compared to the other plant species Cajanus, Chamaecrista, and Clitoria were characterized by a greater capability to absorb P at low external P concentrations. The nine cover crops and maize were also grown in pot experiments using two soils from northern Nigeria low in available P. The ultisol from Jos had a high P fixation capacity and was more acidic than the alfisol from Zaria. All plant species were precultured in the first season at 100 (Zaria) and 250 (Jos) mg P per pot. In the subsequent season, maize was uniformly seeded into all pots containing the remaining roots and the incorporated shoot dry mass (according to 15 mg P per pot) of the pre‐crop. No P and 250 (Zaria) or 500 (Jos) mg P per pot were freshly applied. Maize growth and P uptake were enhanced after legumes in Zaria soil. Cajanus showed the highest residual effect, and also Clitoria, Chamaecrista, and Lablab showed effects superior to the mean. In Jos soil, Clitoria, Cajanus, and Lablab enhanced maize growth above average. Also, a highly significant positive correlation between P uptake and biomass production was obtained. These results indicate that enhancement of maize growth after leguminous cover crops, at the low P supply of the soil used, mainly depends on P mobilization capacity of the cover crop.     

Lignin turnover in an agricultural field: from plant residues to soil-protected fractions

Lignin has long been suspected to be a major source of stable carbon in soils, notably because of the recalcitrant nature of its polyphenolic structure relative to other families of plant molecules. However, lignin turnover studies have produced conflicting results, most of them suggesting that large proportions of plant‐residue lignin decompose within a year of incorporation into soils. Here, we propose a two‐reservoir model where lignin in undecomposed plant residue (Lp) can either reach soil fractions where it is somewhat protected from further decomposition (Ls) or is transformed to non‐lignin products. Model calibration data were obtained through compound‐specific ¹³C isotopic analyses conducted in a zero‐ to 9‐year chronosequence of maize monoculture after wheat in a temperate loam soil of the Paris basin. Lignin was quantified by CuO oxidation as VSC‐lignin, i.e. the sum of vanillil‐ (V), syringyl‐ (S) and coumaryl‐type (C) phenols. Model calibrations indicate that Lp has a turnover rate faster than 1 year and that 92% is mineralized as CO₂ or transformed into other non‐lignin products, while only 8% reaches the Ls fraction. Estimated turnover rate of the Ls fraction was 0.05 years^?1. The model also suggested that about half of Lp was not measured because it had been excluded from the samples in the process of sieving at 5 mm. In conclusion, the model indicates that chemical recalcitrance alone is not sufficient to explain VSC‐lignin turnover in soils, and that, functionally, the most relevant mechanism appears to be the transfer of VSC‐lignin molecules and fragments from decomposing plant tissues to soil‐protected fractions.     

运用红边参数估算叶片叶绿素含量

Soil samples collected from several sites along an altitudinal transect on the eastern slope of the Tibetan Plateau were analyzed for hexachlorobenzenes(HCHs) and dichlorodiphenyltrichloroethanes(DDTs).The results showed that HCHs and DDTs were found in the soil samples from the remote high altitude areas away from source regions,which confirmed the long-range atmospheric transport phenomenon of these organochlorine pesticides(OCPs) insecticides.The OCP concentrations in the soils had a significant negative correlation with altitude;they showed a trend to increase with decreasing altitude,but the increase was not continuous,being interrupted at some moderate-altitude sites on the transect.The distances from the source region,landforms,soil properties,and physical-chemical properties of OCPs were more important than total organic carbon content to the distribution of OCPs in soils disturbed by human activities.An analysis of the compositions of HCH isomers and DDTs revealed predominantly low ratios of α-HCH to γ-HCH,ranging from 0.06 to 4.79,which suggested current lindane inputs.On the other hand,low p,p-DDT/p,p-DDE and o,p-DDT/p,p-DDT ratios were observed,indicating mainly aged historical DDT residues in the study area.     

Formation of aroma compounds and lipoxygenase (EC 1.13.11.12) activity in unblanched leek (Allium ampeloprasum Var. Bulga) slices during long-term frozen storage

The content of aroma compounds (dynamic headspace) and catalytic activity of lipoxygenase (LOX) (EC. 1.13.11.12) were analyzed in 15 mm unblanched leek slices seven times during 12 months of frozen storage. The aroma profile changed from consisting of almost only sulfur compounds such as dipropyl disulfide [concentration in fresh leek (FL) = 0.197 mg/L, concentration after 12 months of frozen storage (12M) = 0.0409 mg/L] and propyl (E)-propenyl disulfide (FL = 0.0437 mg/L, 12M = 0.00452 mg/L) in the fresh leeks to being dominated by numerous saturated and unsaturated aldehydes, such as hexanal (FL = 1.53 mg/L, 12M = 3.63 mg/L), (E,E)-2,4-nonadienal (FL = 0.000 mg/L, 12M = 0.0647 mg/L), and (E,E)-2,4-decadienal (FL = 0.129 mg/L, 12M = 0.594 mg/L) at the end of the storage period. The catalytic activity of LOX diminished throughout frozen storage, but approximately 25% of the original activity was present after 12 months of storage.     

Determination of odor active aroma compounds in freshly cut leek (Allium ampeloprasum Var. bulga) and in long-term stored frozen unblanched and blanched leek slices by gas chromatography olfactometry analysis

The odor active compounds in freshly cut leek slices and in blanched and unblanched leek slices stored for 12 months were investigated by a detection frequency method. Fifteen judges were evaluating the three samples randomized. The most important aroma compounds in the freshly cut leek slices were dipropyl disulfide, methyl propenyl disulfide, pentanal, decanal, and propyl propenyl disulfide in order of priority. When stored frozen and unblanched for 12 months, the aroma composition changed and the most important compounds became pentanal, decanal, 2,5-dimethyl furan, unknown compound I, and dipropyl disulfide. Blanching before freezing prevented to some degree these changes but also reduced the perceived intensity of the aroma compounds. The most important aroma compounds in the blanched sample were dipropyl disulfide, unknown compound I, pentanal, 2,5-dimethyl furan, and propyl propenyl disulfide.     

Soil phosphorus mobilization in the rhizosphere of cover crops has little effect on phosphorus cycling in California agricultural soils

Phosphorus (P) is a key limiting factor in many terrestrial ecosystems because most soil P is bound to soil minerals or organic matter. Increasing P cycling rates can increase P availability, including in agricultural soils that receive external P inputs. For example, cover crops may increase P cycling rates via plant uptake and P release during microbial decomposition. Cover crops and associated microbes may also change rhizosphere properties and stimulate soil P mobilization. We studied the potential of legume – fava bean (Vicia faba), vetches (Vicia dasycarpa, Vicia sativa, Vicia benghalensis) pea (Pisum sativum) – and cereal – rye (Secale cereale), wheat (Triticum aestivum), oat (Avena sativa) – cover crops to stimulate P cycling across management practices in two long-term systems trials in California. We measured cover crop biomass and nutrient content, P-mobilizing capacity (pH, organic acids, phosphatase activity) and soil P fraction changes in the rhizosphere. Cereals generally produced more biomass with similar P content compared to legumes, but higher C:P in cereal residues could favor microbial immobilization, delay residue mineralization and reduce P cycling rates. Legumes, especially fava bean, had the largest effect on rhizosphere properties by reducing pH and increasing organic acids concentrations and phosphatase activity. However, these changes in rhizosphere properties had a modest impact on soil P and did not increase soil P availability. Furthermore, we found no strong effect of management practices or soil P concentrations on soil P mobilization. Our results suggest that P mobilization in the rhizosphere of legumes is unlikely to increase P cycling rates in these soils, whereas P uptake and release in cereal biomass could have stronger effects.     

长期不同施肥方式对砷在典型壤质潮土及作物中累积的影响

本文研究了长期(1989—2009年)不同施肥方式对砷在黄淮海地区典型壤质潮土及作物中累积的影响。田间试验设置7个处理:有机肥(OM)、OM+无机化肥氮磷钾(NPK)、NPK、NP、PK、NK和不施肥(CK),OM+NPK处理为有机肥和无机化肥氮磷钾各施一半。结果显示,长期不同施肥方式下砷在表层(0~20 cm)及亚表层(20~40 cm)土壤中的含量均有明显累积,但含量较低(<25 mg.kg 1),对农田生态环境安全的影响较小。土壤中砷的累积主要与灌溉及沉降有关,受施肥方式的影响相对较小。磷肥中砷的含量明显高于氮肥、钾肥及有机肥,磷肥的长期施用促进了砷在PK处理土壤中的累积,但在作物产量较高的情况下,对其在土壤中累积趋势的影响较小,而有机肥的添加则会减缓这种累积趋势。砷在小麦和玉米两种典型作物组织中的含量分布表现为:根系>茎叶>籽粒,其中籽粒中砷的含量显著低于根系及国家食品安全相关标准。经过长期不同方式的施肥处理,砷在小麦组织中的含量表现为:PK>OM>OM+NPK>NPK>NP>NK>CK,与土壤中有效磷含量的变化基本一致,并间接受到土壤有机质的影响。在OM、OM+NPK、NPK和NP施肥处理下,土壤有机质含量及作物产量均较高,土壤有机质含量的提高促进了砷在小麦体内的富集,但对其在玉米根系中含量的影响不明显;玉米生长期较短且产量较高,对砷的需求量较大,土壤中有效态砷含量的不足抑制了其在玉米根系中的分布,但玉米通过加强组织对砷的转移能力提高了其在茎叶中的含量。     

Expression of andic properties in soils from Galicia (NW Spain) under forest and agricultural use

The organic matter (OM) of soils with andic properties has long been considered highly stable because of the presence of Al–humus complexes and sorption of organic ligands onto amorphous compounds. In this study, we characterized soils under different land use regimes located within an amphibolitic massif close to Santiago de Compostela (Spain), where soils with andic properties are present. Slash and burn agriculture was a common practice in the area until the second half of the 20th century. Thereafter, modern agriculture was progressively introduced into the area (AGR soils), and the rest of the land was either reforested or abandoned (FOR soils). We found that the mean organic C content of AGR soils (48.7 g kg^?1) was ～ 50% that of FOR soils (94.2 g kg^?1). Mean soil pH was significantly greater (P < 0.05) in the AGR than in the FOR soils (4.95 compared with 4.63), which is attributed to liming and Ca‐phosphate fertilization of the former. Mean concentrations of the Al forms studied (extractable with CuCl₂, sodium pyrophosphate, ammonium oxalate, or NaOH) were significantly smaller (P < 0.01) in AGR (1.4, 4.9, 9.3, 11.0 g kg^?1, respectively) than in FOR soils (3.9, 10.2, 16.5, 17.9 g kg^?1, respectively). The results show the vulnerability of the OM and Al–humus complexes in these soils to modern agricultural practices, which has led to the attenuation – and in some cases even the disappearance – of andic soil properties in a relatively short time (< 30 years) following changes in land use/management. We propose the inclusion of the formative element ‘andic’ in the criteria for the definition of Umbrisol subunits; this would avoid the abrupt discontinuity observed in the current World Reference Base classification.