Early generation selection for potato tuber quality in progenies of late blight resistant parents

Developing disease resistant cultivars is one of the major objectives for a potato (Solanum tuberosum L.) breeding program, but many resistant clones have not achieved commercial acceptance because of late maturity and non-marketable tuber characteristics. Selection for tuber quality should have greater emphasis inbreeding disease resistant cultivars. The objectives of this study were 1) to evaluate the ability of late blight (Phytophthora infestans (Mont.) de Bary) resistant parents to transmit chip-processing (tuber appearance, specificgravity, and chip-color) or tablestock (tuber appearance) quality to the offspring and 2) to compare selecting for tuber quality in single-hill versus eight-hill generations. We made crosses among eight unadapted potato cultivars (B0718-3,Bertita, Bzura, Greta, Libertas, Stobrawa, Tollocan, and Zarevo) with reported late blight resistance with adapted susceptible cultivars/breeding clones to generate 95populations (4,750 seedlings). Approximately 10% of the progeny from each cross were selected from single-hill plots based on tuber appearance, number, shape, and internal defects. These selected clones (408) were evaluated for tuber appearance, specific gravity, and chip-color. The same evaluations in the following year were made on tuber samples from eight-hill plots. Libertas and Tollocan were the best parents for transmitting chip-color; B0718-3, Zarevo, and Tollocan for transmitting tuber appearance; and Bzura, Libertas, and Zarevo for transmitting high specific gravity to the highest percentage of the offspring. Overall, 50% and 56% of the clones based on single- and eight-hill generation, respectively, were considered to possess chip-processing quality; over 90% of the clones had acceptable tablestock quality. A total of 71% of the clones possessing acceptable chip-processing and 95% of the clones possessing acceptable tablestock quality selected in both generations were identified in single-hill plots. The evaluation of tuber quality characteristics in single-hill generation not only permitted the identification of clones with acceptable chip-processing and tablestock, but also increased the amount of clonal information for the following generation of selection. In crosses between late blight resistant and susceptible clones, selection for tuber quality traits can be initiated in single-hill generation using a moderate selection intensity and precede late blight testing. This revised version was published online in August 2006 with corrections to the Cover Date.     

Breeding for impact resistance in potato: use of a pendulum in progeny testing

Breeding for impact resistance in potato is common at the end of a breeding scheme, where there is no more variability for it. The purpose of this study was to propose an objective progeny test using a pendulum and single-year data. Data were recorded over a 5-year period using 275 progenies, organized in small factorial and hierarchical designs. The variability of response of the additive variance made it impossible to generalize parental choice. However, once the crosses were made, the high degree of variability among the progenies and the high level of broad-sense heritability in every case suggest that selection can be carried out efficiently using single-year data.     

Genetic parameters and correlation in early measurement cycles in rubber trees

Knowledge of the traits present in plant populations of a species is essential to carry out selection and breeding. The objective of the present study was to estimate the genetic parameters and correlate genetically and phenotypically the variables rubber yield, annual trunk girth increase, number of latex vessel rings and bark thickness in early measurement cycles. A total of 22 rubber tree progenies (Hevea brasiliensis) were assessed in three locations during three early measurement cycles. The bark thickness variable correlated significantly for the three increase measurements made in the locations of Jaú, Pindorama and Votuporanga. The progeny mean based joint hereditability showed mean values greater than individual plants and within progeny plants of 0.848, 0.286 and 0.242, respectively. The variables annual trunk girth increase and bark thickness are genetically correlated variables. Rubber yield is correlated genetically with bark thickness that permits simultaneous selection for the two characteristics. The early measurement cycles were efficacious for finding genetic variability among the genotypes.     

Half-sib progeny evaluation and selection of potatoes resistant to the US8 genotype of Phytophthora infestans from crosses between resistant and susceptible parents

The objectives of this study were to evaluate the use of potato (Solanum tuberosum L.) late blight (Phytophthora infestans (Mont.) de Bary) resistant parents in cultivar development and identify superior clones possessing moderate to high late blight resistance combined with acceptable maturity and tuber quality. Ninety-five crosses were made between eight unadapted parents with reported late blight resistance (B0718-3, Bertita, Bzura, Greta, Libertas, Stobrawa, Tollocan and Zarevo) and susceptible parents (cultivars or advanced breeding clones) adapted to North American growing conditions. A total of 408 field selected clones were assessed for late blight resistance in the greenhouse and in the field using a mixture of US8 P. infestans isolates (A2 mating type, metalaxyl resistant) that overcame all known R-genes except R8 and R9. Clones with ≤ 10% infected foliar area in the greenhouse test or ≤ 0.30 RAUDPC (relative area under the disease progress curve) value in the field in 1998 were re-tested in 1999. A total of 118 (29% of 408) putative late blight resistant clones were selected. The eight late blight resistant parents differed in both the ability to transmit late blight resistance and in the level of resistance transmitted to the progeny. The Tollocan and B0718-3 families (half-sib progeny) had the greatest degree of resistance and frequency of resistant clones. Scott-Knott cluster analysis ranked 79 clones (67% of 118) in the high and moderate late blight resistant groups. Among these 79 clones, 19 clones had vine maturity equal to or earlier than mid-season combined with acceptable tuber quality. Further selection in 2000 resulted in eight advanced selected clones (six from Tollocan and two from B0718-3 families) with the same level of resistance as the parent combined with vine maturity and tuber quality equivalent to Atlantic, a standard cultivar for chip processing in North America. The results indicate that this breeding approach can be used to select parents for late blight resistance breeding and to identify superior clones with high levels of late blight resistance and marketable vine maturity and tuber quality. This revised version was published online in July 2006 with corrections to the Cover Date.     

Correlation between late blight resistance and foliage maturity type in potato

The genetics of race-non-specific foliage resistance against Phytophthora infestans, of foliage maturity type, and of their association in potato (Solanum tuberosum) were studied. Six progenies were derived from a half-diallel set of crosses between diploid potato clones that represented a broad pool within the genus Solanum and were free of any of the 11 known R genes for late blight resistance. The progenies were evaluated for resistance to late blight and for foliage maturity type, and five of them showed a significant correlation between the two traits. The correlation did not account for all variation that was present for both traits, as reflected in the analysis in which the relative AUDPC values were adjusted for foliage maturity type. The present study adds to previous results: resistance against P. infestans always coincides with late foliage maturity. However, the results also indicate that some selection for late blight resistance without affecting the foliage maturity type should be possible.     

The breeding values of potato parents for field resistance to late blight measured by whole seedlings

Summary Parents used in a potato breeding programme were intercrossed in a multiple mating scheme. The resulting progenies were assessed for resistance to late blight, using as criteria the size and frequencies of lesions on leaves, on petioles and on stems, and an overall score. Analysis of variance showed that all the statistically significant genetic variation was attributable to general combining ability (GCA) differences. The seven variates were highly correlated.     

Analysis of parental effects on mean vine maturity and chip colour of 4x.2x potato progenies

Summary The parental effects on progenies from potato 4x.2x(FDR) crosses were analyzed to determine anether and to what extent selection criteria used for selecting tetraploid breeding lines have to be adjusted when selecting diploid breeding lines. For vine maturity and chip colour multiple regression analysis of progeny means on means of diploid and tetraploid parents revealed high coefficients of determination (R²) for both characters, indicating good predicting power of the performance of both diploid and tetraploid parents on the performance of their 4x.2x progenies. For vine maturity the multiple regression slope for the tetraploid perents was significantly larger than for the diploid parents, and progeny means were towards the tetraploid parents. This indicates that selection criteria for vine maturity may be less stringent at the diploid level. However, diploids may be earlier maturing than tetraploids and therefore selection criteria can better be similar at both ploidy levels. For chip colour, multiple regression slopes for diploid and tetraploid parents were similar and progeny means were towards the darkest coloured parent irrespective of its ploidy level. This indicates that selection of breeding lines for chip colour can be conducted similarly at both ploidy levels.     

Estimates of within family genetic variability for clonal selection in oil palm

Within family genetic and environmental variabilities in oil palm dura (D) ×pisifera (P) hybrid progenies were estimated from a D × P progeny test trial, a clonal trial and a clonal cum D × P progeny test trial and with the objective of examining the efficiency of selecting source palms (ortets) within family for clonal propagation. The clones were derived from seedling embryos or seedlings that were progeny reproductions of families proven in the first trial. The progenies in the second trial represented the source families of two sets of clones planted in the same trial. Estimates were obtained from: between and within family variance components; between and within clone variance components; and difference between pooled within family variance and pooled within clone variance. Estimates were generally similar with the different methods used. Within family genetic variabilities were generally low in progenies derived from more inbred parents especially in bunch and oil yields. In progenies from more outbred or variable parents, within family genetic variabilities were relatively higher particularly for oil to bunch and palm height; nevertheless environmental variabilities predominated. The low efficiency of within family palm or ortet selection for clone production and the need for repeated clonal tests over time and space to identify outstanding clones are stressed and the implications to commercial clonal propagation of oil palm discussed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Heritility of field resistance to potato leafroU virus in cultivated potato

Potato progenies in a line x tester mating design and the clonal parents were screened for field resistance to potato leafroll virus (PLRV) to determine the heritability of this trait. Twelve advanced potato clones or varieties were crossed as pistillate parents to two pollen testers. The seedling progenies and clonal parents were exposed to aphid-transmitted potato leafroll virus for two growing seasons. Cumulative infection by potato leafroll virus was determined by post-season sero-logical indexing of foliage grown from sprouted tubers after 2 years of exposure. Narrow-sense heritability was estimated from regression of mid-parent on progeny as h = 0.72. This estimate indicates a high level of useabie genetic variance for PLRV resistance in advanced breeding materials. Although variation in resistance to PLRV appears to be a quantitative trait in susceptible and moderately resistant clones, per-formance of the most resistant parents suggests that genes with major effects may be present. These results are similar to the conclusions of other researchers who found one or two genes controlling the pheno-types of extreme resistance, resistance to infection, or suppression of virus titre.     

Molecular markers for late blight resistance breeding of potato: an update

Late blight is the most devastating disease of the potato crop that can be effectively managed by growing resistant cultivars. Introgression of resistance (R) genes/quantitative trait loci (QTLs) from the Solanum germplasm into common potato is one of the plausible approaches to breed resistant cultivars. Although the conventional method of breeding will continue to play a primary role in potato improvement, molecular marker technology is becoming one of its integral components. To achieve rapid success, from the past to recent years, several R genes/QTLs that originated from wild/cultivated Solanum species were mapped on the potato genome and a few genes were cloned using molecular approaches. As a result, molecular markers closely linked to resistance genes or QTLs offer a quicker potato breeding option through marker‐assisted selection (MAS). However, limited progress has been achieved so far through MAS in potato breeding. In near future, new resistance genes/QTLs are expected to be discovered from wild Solanum gene pools and linked molecular markers would be available for MAS. This article presents an update on the development of molecular markers linked to late blight resistance genes or QTLs by utilization of Solanum species for MAS in potato.     

分子标记技术在马铃薯晚疫病研究中的应用

马铃薯是世界上重要的粮食作物之一,晚疫病则是当今危害马铃薯生产最为严重的病害。重点介绍了四种常用的分子标记技术RFLP、RAPD、AFLP和SSR,以及国内外利用这些标记技术在马铃薯晚疫病研究中的应用。分析了马铃薯晚疫病菌的遗传多样性、菌株抗药性、有性杂交后代的遗传分离以及抗病种质资源的遗传多样性,介绍了遗传图谱的构建、抗性基因及与晚疫病抗性相关的QTL定位、体细胞杂种及回交后代的晚疫病抗性检测。这些对今后中国学者开展相关领域的研究具有重要的借鉴意义。     

Replicate allocation to improve selection efficiency in the early stages of a potato breeding scheme

Field data and simulation were used to investigate replication within trials and the allocation of replicates across trial sites using partial replication as an approach to improve the efficiency of early-stage selection in a potato breeding programme. Analysis of potato trial data using linear mixed models, based on four-plant (clonal) plots planted as augmented partially-replicated (p-rep) designs, obtained genetic and environmental components of variation for a number of yield and tuber components. Heritabilities, trial-to-trial genetic correlations and performance repeatability of clonal selections in p-rep trials and in subsequent fully replicated trial stages were high, and selection was effective for the economically important traits of marketable tuber yield and tuber cooking quality. Simulations using a parameter-based approach, pertaining to the variance components estimated from the p-rep field trials, and the parametric bootstrapping of historic empirical data showed improved rates of genetic gain with p-rep testing over one and two locations compared with testing in fully replicated trials. This potato breeding study suggests that the evaluation and selection of a clonal field crop in fully replicated trials may not be optimal in the early stages of a breeding cycle and that p-rep designs offer a more efficient and practical alternative.     

马铃薯晚疫病CARAH预警模型在四川春马铃薯上的应用

为明确马铃薯晚疫病CARAH预警模型在四川春马铃薯上的适用性,选择在四川不同海拔高度的马铃薯种植基地运用CARAH预警模型监测马铃薯晚疫病的发生和进行防控指导。结果表明,海拔高度越高,马铃薯晚疫病侵染程度越低,海拔3500 m以上时,主要以轻度侵染为主,海拔3500 m以下时,主要以中度和重度侵染为主。不同品种出现中心病株时的马铃薯晚疫病侵染循环代数不同,相同品种在不同地区出现马铃薯晚疫病中心病株时所处的侵染循环有所差别,可能与不同地区马铃薯晚疫病菌致病力存在差异有关。利用马铃薯晚疫病CARAH预警模型指导药剂防治,5种药剂仍表现出较高的防治效果,且不存在显著性差异。     

Inheritance of resistance to late blight (Phytophthora infestans) in potato

Under epiphytotic conditions for late blight in spring seasons, data were recorded on its intensity four times at 4 days intervals from the start of the disease in the field, in 114 (19 females × 6 males) progenies and their parents planted in randomized complete block design in the years 2005 and 2006. Regression and stepwise regression analysis showed that observations during the rapidly increasing phase of disease between initial and last phase of disease are more important than the observations at initial and last phase of the disease. Combining ability analysis on a sub-set of 68 progenies showed that the additive component of genetic variance was more important than the non-additive component of variance in inheritance of quantitative resistance to late blight. The per se performance of the parents does give an idea about their general combining ability (GCA). However, selection of parents based on their GCA will be very useful for breeding for quantitative resistance to late blight. Parents JX 90, JF 4841, CP 3356, CP 1358, CP 3290, JN 1197 and CP 3125 were found to have good GCA for quantitative resistance for late blight and the best six crosses for late bilght resistance based on mean performance involved parents with good combining ability only.     

Multiple resistance to diseases and pests in potatoes

Summary The potato has more characters of economic importance that need to be considered by the breeder than any other temperate crop. In Europe these include resistance to at least twelve major diseases and pests. Highest priority has been given to resistance to late blight (Phytophthora infestans), virus diseases (particularly those caused by potato leafroll virus and potato virus Y) and potato cyst nematode (Globodera rostochiensis andG. pallida). Useful sources of resistance are available and early generation screening techniques have been developed to allow positive selection for multiple resistance and the breeding value of clones used as parents to be determined. Progress in restriction fragment length polymorphism technology should result in more efficient selection in the future.     

Development of an appropriate breeding scheme for tolerance to Empoasca kraemeri in common bean

Summary Significant advances in increasing tolerance to the leafhopper Empoasca kraemeri Ross & Moore in common bean have been obtained using a new breeding scheme where yield under leafhopper attack is the principal selection criterion in the evaluation of progenies. However, to further refine this breeding scheme, a study was conducted to determine whether selection for nonprotected yield would be more effective in early versus late generations. Two selection strategies were compared. In Strategy I, early generation selections in the F₂ and F₃ were compared to Strategy II where late generation selections were made in the F₄ and F₅, with the F₂ and F₃ generations advanced using single pod descent and bulk practices, respectively. Yield trials of the F₆ lines from both selection strategies were conducted under nonprotected and insecticide protected treatments. No significant differences were detected between the two selection strategies. However, Strategy II did produce advanced lines with greater nonprotected yields than did Strategy I, with the best F₆ line, in three out of four crosses, coming out of Strategy II. Late generation selection is recommended over early generation selection. Results of the new leafhopper breeding scheme, based on yield, are compared to the old breeding scheme where selections were made using visual selection practices in early generations.     

Improving seed yield in red clover through marker assisted parentage analysis

Red clover (Trifolium pratense L.) is an important perennial forage crop in Europe. Unfortunately, seed production of modern cultivars is often unsatisfactory and breeding progress for higher seed yield is slow. We evaluated whether marker assisted parentage analysis could identify progeny plants with two high seed-yielding parents in a diploid selection trial. Furthermore, we studied if breeding for high seed yield could be speeded up by selecting progeny plants with two high seed-yielding parents, compared to traditional selection on the mother plant only. In this study, 111 genotypes with excellent vegetative traits from a first cycle selection trial were allowed to pollinate each other in isolation. After seed harvest, ten high seed-yielding plants were identified and their seeds were used to grow ten half-sib progeny populations, with 1,121 plants in total. Two multiplex primer sets targeting 18 SSR loci were designed and used to fingerprint parental and progeny plants. Parentage was reliably determined for 1,083 progeny plants: 135 plants were the result of a cross between two high seed-yielding parents. In a 2-year seed yield trial, the seed yield of these 135 progeny plants was compared to that of a control group of 216 progeny plants from the same ten high seed-yielding mother plants but with no selection on the male contribution, as is current practice. Compared to the control group, progeny plants with two high seed-yielding parents had significantly higher seed yields, 23.0 and 75.9 % higher in 2012 and 2013 respectively, and a significantly higher thousand seed weight, 6.6 and 5.7 % higher in 2012 and 2013 respectively. Seed yield was strongly correlated with flower abundance (r = 0.643) and plant volume (r = 0.593 in 2012 and r = 0.509 in 2013) and negatively correlated with susceptibility to mildew (r = ?0.145). We conclude that breeding programs aiming at increasing seed yield in diploid red clover cultivars would strongly benefit from the integration of marker assisted parentage analysis to identify those progeny plants that are the result of a cross between two high seed-yielding plants. This goal cannot be achieved with traditional family selection where only the seed yield of the mother plant is known.     

Modified full-sib selection and best linear unbiased prediction of progeny performance in a European F2 maize population

Four cycles of modified recurrent full‐sib (FS) selection were conducted in an intermated F₂ population of European flint maize. The objectives of our study were to monitor trends across selection cycles in the estimates of population mean, inbreeding coefficients and variance components, and to investigate the usefulness of best linear unbiased prediction (BLUP) of progeny performance under the recurrent FS selection scheme applied. We used a selection rate of 25% for a selection index, based on grain yield and dry matter content. A pseudo‐factorial mating scheme was used for recombination. In this scheme, the selected FS families were divided into an upper‐ranking group of parents mated to the lower‐ranking group. Variance components were estimated with restricted maximum likelihood (REML). Average grain yield increased 1.2 t/ha per cycle, average grain moisture decreased 20.1 g/kg per cycle, and the selection index relative to the F₂ check entries decreased 0.3% per cycle. For a more precise calculation of selection response, the four cycles should be tested together in multi‐environmental trials. We observed a significant decrease in additive variance in the selection index, suggesting smaller future selection response. Predictions of FS family performance in Cn + 1 based on mean performance of parental FS families in Cn were of equal precision as those based on the mean additive genetic BLUP of their parents, and corresponding correlations were of moderate size for grain moisture and selection index.     

A breeding method for accelerated development of cold chipping clones in potato

Summary The development of potato cultivars having acceptable chipping quality after cold storage is important because it reduces costs to growers while ensuring continuity of supply to processors throughout the year. Over 5100 single-hill progenies were planted to select for cold chippers. A breeding procedure for selecting and evaluating these progenies for cold chipping ability was used, and 38 desirable genotypes were identified. These selections were increased in the second clonal generation and evaluated for yield, specific gravity, and seven chipping treatments of varying storage duration/temperature/reconditioning duration and were compared to standard chipping cultivars Atlantic, Monona, Norchip, and Snowden. Twenty-two selections yielded Norchip the highest yielding cultivar, while 15 selections had a specific gravity Atlantic, the highest specific gravity cultivar. Snowden was the best chipping cultivar overall and some selections were not significantly different than Snowden. Overall, nine selections combined high yield and specific gravity with the ability to produce attractive chips from 4° C. Single-hill selection for cold chipping could potentially save four years in the breeding process by the identification of good parents, the recycling of good parental cross combinations, and the evaluation of progeny for chipping earlier in the breeding program.