柑橘溃疡病菌单链二硫键稳定重组抗体的构建、表达和特性

柑橘溃疡病(citrus bacterial canker disease,CBCD)是危害柑橘(Citrus reticulata Blanco)的重要病害,为了给柑橘溃疡病的现场快速诊断提供一种稳定的重组抗体,构建一种快速检测技术,本研究以鼠源抗柑橘溃疡病菌(Xanthomonas axonopodis pv.citri,Xac)表面脂多糖的二硫键稳定性抗体dsFv为模板进行基因改造,利用重叠延伸PCR在其重链可变区(VH)和轻链可变区(VL)之间引入一条人类抗体重链恒定区1(CH1)5'端12个氨基酸的序列作为连接肽,构建重组单链二硫键稳定抗体基因sc-dsFv。将获得的基因连接pET24a(+)载体,转入大肠杆菌(Escherichia coli)BL21(DE3)得到工程菌,IPTG诱导表达。表达产物经体外复性并以Ni-NTA亲和层析对目标蛋白sc-dsFv进行纯化,利用斑点免疫杂交、ELISA和BIAcore检测抗体的活性、稳定性、特异性及亲和力。构建的抗体基因经测序结果表明,抗体重链可变区(VH)和轻链可变区(VL)基因之间成功引入目标连接肽序列,重组sc-dsFv蛋白实现了原核高效表达;通过体...     

抗对硫磷基因工程抗体ScFv的制备及其初步鉴定

用一段45个核苷酸的片段连接抗对硫磷抗体重链和轻链可变区基因片段VH和VL,获得了抗对硫磷单链抗体(single chain variable fragment,scFv)基因,构建了抗对硫磷scFv基因原核表达载体。SDS-PAGE和Western blot分析显示,该单链抗体基因能在大肠杆菌Origami 2中特异性表达,融合蛋白分子量约为28kD。用Ni-NTA金属亲和层析法对可溶性表达产物进行纯化,得到目的蛋白纯度为74.8%;ELISA反应结果证明,该单链抗体可以与对硫磷发生特异性反应。     

抗二氟沙星单克隆抗体可变区基因的克隆及序列分析

采用RT-PCR技术,从抗二氟沙星单克隆抗体X1杂交瘤细胞株总RNA中扩增VH和VL基因片段,克隆入pUC18载体,测序进行（X1）可变区基因的克隆及序列分析。通过互联网检索发现VH和VL基因与Ig同源,分别符合小鼠IgVH和Igκ基因特征。VH基因全长363bp,编码121个氨基酸;VL基因全长为348bp,编码11...     

表达禽流感病毒核蛋白重组噬菌体的构建

摘要：利用PCR技术，扩增去除部分序列、长度为1320 bp、编码440个氨基酸的禽流感病毒(AIV)NP基因片段，将其克隆至pR质粒的T4噬菌体SOC基因C末端获得重组质粒pR-NP，以此重组载体转化大肠杆菌E2，用溶菌酶缺陷噬菌体T4-Z1感染重组E2菌，重组载体与缺陷噬菌体T4-Z1基因发生同源重组，将NP基因整合到噬菌体基因组中，用PCR方法筛选重组噬菌体并命名为T4-Z1-NP。经Western blot检测证实，T4-Z1-NP表达的NP融合蛋白具有免疫学活性。成功构建了表达禽流感病毒核蛋白的重组噬菌体。     

PCV2衣壳蛋白羧基端基因在T4噬菌体表面的展示

用PCR扩增猪圆环病毒II型广东分离株的衣壳蛋白羧基端基因,将PCR产物连接到重组型质粒pR上,转化DH5α细胞并筛选阳性克隆;重组质粒经PCR鉴定并测序后,转化E2菌,将重组E2菌与缺陷型噬菌体T4-Z1同源重组后,得到重组噬菌体,SDS-PAGE和Westernbloting分析,表明衣壳蛋白基因在噬菌体表面正确展示,表达的融合蛋白的分子量约为25Ku。     

以鸡恒定链(Ii)为载体的新城疫病毒-F蛋白表位基因疫苗的免疫原性

本文研究了以鸡恒定链基因(invariant chain,Ii)为载体的新城疫病毒(Newcastle disease virus,NDV)F基因片段的基因疫苗及其小鼠的免疫应答.首先,用重叠延伸法经3轮PCR获得以NDV-F343表位基因(327-359 AA)取代鸡恒定链中Ⅱ类分子相关肽段(class-Ⅱassociated invariant chain peptide,CLIP)片段序列,构建了基于恒定链的NDV内源性靶向基因疫苗(C1-△CLIP-Ii-F343).其次,在观察C1-△CLIP-Ii-F343和无恒定链载体的C1-F343转染真核细胞中,发现它们均能在COS-7细胞中高效表达.最后,将25只6～8周龄的雌性Balb/c小鼠(Mus musculus)随机分为5组,用C1-△CLIP-Ii-F343和非靶向性疫苗(C1-F343)进行免疫,以C1-△CLIP-Ii、pEGFP-C1和生理盐水作为对照.经3次免疫后,取小鼠尾部血对小鼠的体液免疫进行检测.结果表明,在C1-△CLIP-Ii-F343和C1-F343免疫组小鼠血清中均可检测到针对NDV的特异性抗体,其滴度分别达到1/6400和1/1600.进一步Western blot研究结果表明,抗体与接种NDV的鸡胚尿囊液和原核表达的PET-NDV-F306蛋白均产生特异性结合.研究结果提示,鸡恒定链作为载体的NDV基因疫苗能够刺激小鼠产生特异性的体液免疫应答,为新城疫疫苗开发提供了一个新的思路.     

生物质炭与噬菌体联用阻控与灭活土壤-生菜体系中抗生素抗性致病细菌

农田土壤–蔬菜体系中残留和滋生的多种抗生素抗性致病细菌已对人体健康和生态环境安全造成较严重的隐患,因此开展针对性的风险管控技术研究十分迫切。生物质炭阻控与农业噬菌体疗法联用靶向灭活土壤–蔬菜体系中抗生素抗性致病细菌,为解决此类污染土壤问题提供了全新途径。本研究以自主制备的抗生素抗性致病细菌(携带四环素抗性基因tet W的大肠杆菌K12,携带氯霉素抗性基因amp C的铜绿假单胞菌PAO1)污染农田土壤为盆栽用土,开展生菜土培试验60d。设置单独或同时添加生物质炭和接种广宿主型噬菌体(YSZ 5K)的不同处理,以土壤–生菜体系中K12、PAO1数量变化及tet W、amp C丰度消减程度表征联合修复的效果。结果表明,针对土壤–生菜体系中残留K12、PAO1和tet W、amp C消减程度变化,判断不同处理效果,依次为:BP(生物质炭与噬菌体联用) B(单独施用生物质炭)P(单独接种噬菌体)CK(对照),其中BP处理条件下,K12与PAO1在土壤和生菜叶片中数量较之对照处理下降了2.1～3.1个数量级,tet W和amp C丰度较之对照处理下降了2.2～3.3个数量级。此外,在BP处理条件下,生菜收获后,土壤微生物群落结构与功能多样性和稳定性指数也得到显著提升,证明该联合治理方式是一种较为环境友好的修复技术。本研究结果可为降低土壤–蔬菜体系中抗性致病细菌的残留风险提供科学的理论依据和有效的管控技术。     

噬菌体展示抗体在我国食用农产品生物毒素检测中的应用研究

噬菌体展示抗体技术是近年来研究最热的新型人工基因工程抗体制备技术。本文系统梳理了食用农产品在产供过程中主要生物毒素危害物种类,以及噬菌体展示抗体在相应毒素检测上的应用状况;探讨了该新型抗体制备技术存在的不足,并初步提出了相应的可行性解决方案,旨在为我国食用农产品产供过程中生物毒素危害物检测用新型抗体的研发和利用提供较为详实的参考资料。     

多价噬菌体分离筛选及靶向灭活土壤病原菌的应用研究

农田土壤中残留和滋生多种病原菌会对人体健康和生态环境带来显著的安全隐患,开展针对性的生物修复研究十分迫切。噬菌体疗法靶向灭活土壤中病原菌的技术为修复此类污染土壤提供了全新途径。本研究以南京城郊某奶牛场牛粪堆积池周边,粪肠杆菌和假单胞菌复合污染农田土壤为例,首先筛选和纯化获得两株专一型噬菌体(YSZ1和YSZ5),再人为加速其宿主谱的表达过程,获得对应的多价噬菌体(YSZ1R和YSZ5K),并进行生物学特性(形态、核酸、最佳感染复数、一步生长曲线等)鉴定,结果表明:在水相和污染土壤中不同噬菌体对于同步灭活病原菌的能力依次为YSZ5KYSZ1RYSZ5YSZ1,并且施用多价噬菌体疗法有助于维护和改善修复后土壤微生物生态功能多样性与稳定性。本研究结果可为噬菌体疗法靶向灭活土壤中多种病原菌提供切实可行的修复技术。     

瓜类细菌性果斑病菌hpaP基因的功能分析

瓜类细菌性果斑病(bacterial fruit blotch of watermelon,BFB)是近年来发生在西瓜、甜瓜等葫芦科(Cucurbitaceae)植物上的重要细菌病害,由西瓜噬酸菌(Acidovorax citrulli,Ac)引起.本研究以xjL12菌株为背景构建了转座子(Tn5)插入文库.通过注射接种哈密瓜(Cucumis melo var.saccharinus)子叶和烟草叶片进行突变体的筛选,得到l株致病性完全丧失并失去激发烟草(Nicotiana tabacum)过敏反应的突变体△xj48.对△xj48中转座子插入基因的克隆和测序表明,其突变基因为西瓜噬酸菌Ⅲ型分泌系统(T3SS)中的保守基因hpaP.利用基因重组技术构建了hpaP基因的突变体,发现hpaP突变后影响了xjL12菌株的游动性、生物膜的形成能力及hrcV基因的表达.hpaP基因的互补菌株部分恢复其致病力.本研究证实了果斑病菌中的hpaP基因与该细菌的致病力相关,在侵染瓜类作物的过程中起着不可缺失的作用.     

Production and characterization of single chain Fv directed against beta2-agonist clenbuterol

The single chain Fv (scFv) directed against beta2-agonist clenbuterol (CBL) was produced by using phage display technology. The heavy chain and light chain variable region genes (VH) VL) were amplified by the polymerase chain reaction (PCR) from CBL specific hybridoma cell lines 5D1 and assembled as a single chain Fv (scFv) fragment with linker peptide (Gly4Ser)3. Then the scFv DNA fragment was cloned into M13 phagemid vector pCANTAB5E and the anti-CBL antibody libraries were constructed. Phages displaying scFv were enriched by panning with CBL-ovalbumin (CBL-OVA) conjugate. After only one round of panning, antigen-positive recombinant phage clones were successfully selected by ELISA. The positive phage was used to infect Escherichia coli HB2151, and the expression of soluble scFv was then induced by IPTG. The scFv showed an improved sensitivity (with IC50 of 0.78 +/- 0.005 ng/mL (n = 4)) when compared with the parent monoclonal antibody (MAb) (with IC50 of 1.34 +/- 0.006 ng/mL (n = 4)) in competitive indirect ELISA (CI-ELISA). Cross-reactivity studies showed that the specificity of scFv was similar to that of MAb. The recombinant scFv prepared in this study could be potentially used instead of conventional antisera or MAb for development of a rapid and affordable immunoassay for the detection of residual CBL in biological matrices.     

Synthesis of ligand-specific phage-display ScFv against the herbicide picloram by direct cloning from hyperimmunized mouse

Immunoglobulin genes were directly isolated from the splenocytes of a BALB/C mouse hyperimmunized with the auxinic herbicide picloram conjugated to bovine serum albumin. Variable light and heavy domain DNA were joined to produce single-chain Fv (scFv) DNA, which was cloned into phage vector fd-tet-GIIID to display multiple copies of scFv on the filamentous phage minor coat protein gIIIp. The phage-display scFv library (10(4) clones) was selected against picloram conjugated to ovalbumin. After five rounds of panning, individual clones were analyzed. ScFv with different affinities to picloram (IC(50) values ranging from 20 ppb to 10 ppm) were detected in the final enriched pool. The increased avidity of the phage vector enhanced the selection (i.e., panning) of multiple picloram-specific recombinant antibodies. Stringent selection was required to isolate the clones with the highest affinity. Nucleotide sequence analysis of six isolated clones revealed that all of the V(L) belonged to the V kappa 9A family joined to J kappa 2 segments. All of the V(H) belonged to the V(H)()7183 family and joined to two different J segments (i.e., J(H)()2 or J(H)()4). Different from the immune response to large molecular weight molecules (MW > 10,000 Da), which requires both VDJ segment rearrangement and somatic hypermutations, production of high-affinity antibodies to picloram, a small ligand having a formula weight of 241.5 Da, predominantly requires somatic hypermutations.     

抗对硫磷基因工程四价抗体在大肠杆菌中高效表达与鉴定

为提高抗对硫磷基因工程四价抗体在大肠杆菌中可溶性表达量,本研究利用克隆技术得到四价抗体基因sc-sa,将该融合基因连接至表达载体pTO-T7的Ω序列和T7启动子下游,构建成功的表达质粒导入大肠杆菌OrigamiB(DE3),经IPTG诱导表达,SDS-PAGE和Western Blot鉴定表达产物,Ni亲和层析纯化蛋白,间接非竞争ELISA法测定该四价抗体的亲和力。结果表明在大肠杆菌OrigamiB(DE3)中表达分子量约为46kDa的四价抗体,0.1mmol/L的IPTG在30℃条件下诱导原核表达,外源蛋白占菌体总蛋白含量近50%,纯化后可溶性蛋白纯度在90%以上,ELISA结果显示该抗体与对硫磷结合呈阳性,抗体效价在1∶1×106以上,亲和常数为6.84×108L/mol。与母源抗体和相应单链抗体相比,利用pTO-T7载体四价抗体在大肠杆菌OrigamiB(DE3) 中可实现高效表达,且抗体效价和亲和力均得到进一步提高。     

含CSFV T细胞表位的猪细小病毒样颗粒的表达及小鼠试验免疫研究

摘要：纯化的重组子pM-VP2-E290阳性质粒，与Bac-N-Blue DNA共转染昆虫细胞sf9，通过同源重组，形成具有感染活性的重组杆状病毒，并利用重组病毒的LacZ表型进行噬斑纯化。纯化后的高效价重组杆状病毒在昆虫细胞中进行表达，表达产物应用SDS-聚丙烯酰胺凝胶电泳（SDS-PAGE）、免疫印迹（Western-blot）和免疫酶斑点技术（Dot-ELISA）进行分析，确定所表达的蛋白分子量大小约为67KD，且具有天然蛋白的抗原特异性。应用免疫电镜对表达产物进行观察，可见到细小病毒样颗粒。病毒样颗粒在无免疫佐剂参与的情况下，免疫6-8周龄的BALB/c小鼠，同时设PPV的灭活疫苗免疫组及PBS接种组作为参比对照，检测小鼠的细胞免疫和体液免疫学指标。结果表明，表达蛋白所形成的细小病毒样颗粒，不仅能诱导小鼠机体产生抗CSFV的特异性CTL反应，还能刺激小鼠产生高效价的抗PPV的特异性抗体。而且机体所产生的抗体效价显著高于灭活疫苗对照组。     

Production of a single-chain variable fragment antibody against fumonisin B1

The selection of synthetic antibody fragments from large phage libraries has become a common method for the generation of specific antibodies. The technique is particularly valuable when antibodies against small, non-immunogenic molecules (haptens) or highly toxic substances have to be produced. In addition, haptens are usually coupled to protein carriers, bearing the risk that the free hapten is not detectable. Here, a single variable chain antibody (scFv) against the highly toxic mycotoxin fumonisin B1 has been produced. The hapten was coupled via a linker to biotin. Using this conjugate and a naive scFv library, it was possible to circumvent both the necessity of immunization and the risk of a disguised hapten. The scFv obtained after three panning rounds was found to bind specifically to both free fumonisin B1 and fumonisin-biotin conjugate. Also fumonisin B2 was bound by the scFv. Modeling of both scFv and fumonisin B1 molecule revealed a good fitting of structures. The antibody obtained can potentially be used for developing a rapid and affordable immunoassay for detection of food contamination and can be applied in immunoaffinity chromatography, usually carried out prior to HPLC analysis of mycotoxin-contaminated food and feed.     

口蹄疫病毒3D蛋白在T4噬菌体衣壳表面的展示

本文通过PCR技术获得3D基因,使用拼接重叠延伸聚合酶链反应对3D基因内部的EcoRⅠ位点进行定点突变,将突变后的3D基因克隆至原核表达质粒pSOC和T4噬菌体的穿梭质粒pR中,通过PCR及质粒酶切鉴定,分别获得阳性重组子pSOC-3D和pR-3D。将含有3D基因的重组质粒pSOC-3D质粒转化大肠杆菌BL21进行表达,SDS-PAGE检测表达产物。将含有3D基因的重组质粒pR-3D转化T4噬菌体的宿主菌E2,通过同源重组获得重组噬菌体T4-3D,经SDS-PAGE及Western- blot检测,证明展示在T4噬菌体表面的3D融合蛋白能与FMDV感染血清发生特异性反应。     

家蚕真核细胞翻译起始因子(BmeIF4E)基因的克隆、表达及功能分析

本研究从自建的家蚕(Bombyx mori)蛹期cDNA文库中筛选到一条cDNA序列,发现其在序列和结构上与其他物种的真核细胞翻译起始因子钮基因(BmeIF4E)具有较高的相似性,推测可能是家蚕eIF4E基因,将该序列命名为BmeIF4E,GenBank登录号为DN443192.为研究BmeIF4E的生物学功能,将该基因插入原核表达载体pET-28a(+)中,构建重组质粒pET-28a(+)-BmeIF4E,转化感受态细胞BL21(DE3),IPTG诱导表达并纯化该重组蛋白,制备多克隆抗体.利用家蚕Bm5细胞进行亚细胞定位研究结果表明,BmeIF4E既存在于细胞质中也存在于细胞核中.荧光定量PCR和Westem blot分析结果表明,在不同组织及发育时期该基因的表达有差异,在各组织中BmeIF4E表达量从高到底依次是马氏管、表皮、脂肪体、气管、卵巢、中肠、头和丝腺;在卵、幼虫、蛹和蛾4个发育时期中,蛾中的表达量最高,其次是蛹,再次是五龄幼虫,而在卵中表达量较低.以该基因的ORF为模板体外转录dsRNA,脂质体法转染Bm5细胞,72 h后提取细胞总蛋白作Western blot检测RNA干扰情况,发现BmeIF4E基因被干扰后,总蛋白中目的蛋白含量明显低于阴性对照组.MTT法检测结果表明,干扰后细胞活力也明显下降.研究结果提示,BmeIF4E作为一种重要的管家基因,在家蚕的整个生命周期中均有表达,起着十分重要的作用.     

Real-time polymerase chain reaction monitoring of recombinant DNA entry into soil from decomposing roundup ready leaf biomass

Glyphosate-tolerant, Roundup Ready (RR) soybeans account for about 57% of all genetically modified (GM) crops grown worldwide. The entry of recombinant DNA into soil from GM crops has been identified as an environmental concern due to the possibility of their horizontal transfer to soil microorganisms. RR soybeans contain recombinant gene sequences that can be differentiated from wild-type plant and microbial genes in soil by using a sequence-specific molecular beacon and real-time polymerase chain reaction (PCR). A molecular beacon-based real-time PCR system to quantify a wild-type soybean lectin ( le1) gene was designed to compare amounts of endogenous soybean genes to recombinant DNA in soil. Microcosm studies were carried out to develop methodologies for the detection of recombinant DNA from RR soybeans in soil. RR soybean leaf litterbags were imbedded in the soil under controlled environmental conditions (60% water holding capacity, 10/15 degrees C, and 8/16 h day/night) for 30 days. The soybean biomass decomposition was described using a single-phase exponential equation, and the DNA concentration in planta and in soil was quantified using real-time PCR using sequence-specific molecular beacons for the recombinant cp4 epsps and endogenous soybean lectin ( le1) genes. The biomass of RR soybean leaves was 8.6% less than nontransgenic (NT) soybean leaves after 30 days. The pooled half-disappearance time for cp4 epsps and le1 in RR and of le1 in NT soybean leaves was 1.4 days. All genes from leaves were detected in soil after 30 days. This study provides a methodology for monitoring the entry of RR and NT soybean DNA into soil from decomposing plant residues.     

牛Nanog 原核表达载体构建及其在大肠杆菌中的表达

本研究的目的是构建牛Nanog基因原核表达质粒,并在大肠杆菌JM109中诱导其表达。从6周龄的胎牛原始生殖嵴中提取总RNA, 通过RT-PCR扩增Nanog 基因,将其克隆到PMD-18T载体,再从酶切鉴定和测序正确的质粒上切下目的片断,定向克隆到 pGEX-KG表达载体上,获得原核表达质粒pGEX-KG -Nanog ,限制性内切酶分析和DNA测序证明所插入片段为牛Nanog基因编码序列。重组质粒转化大肠杆菌JM109, 在不同的培养温度和不同浓度的IPTG诱导下均获得了高效表达,说明培养温度和IPTG浓度对GST-Nanog融合蛋白在大肠杆菌中的表达影响甚微;经Western Blotting 检测证实该蛋白约60KD, 大小合适,具有GST抗原活性,从而证实目的蛋白为Nanog 蛋白。