Combining information from benthic community analysis and social studies to establish no‐take zones within a multiple uses marine protected area

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Eroding diversity away: Impacts of a tetrapod breakwater on a subtropical coral reef

1. Artificial barriers for coastal protection have been deployed across numerous tropical and subtropical islands in the Pacific, including Okinawa Island, southern Japan, where artificial defences have been installed along a large part of the coastline.
2. Although artificial barriers can lead to beach narrowing or loss and can exacerbate erosion, their effects on coral reef ecosystems remain understudied.
3. This study investigated the impact of a tetrapod breakwater in Ogimi Village, Okinawa Island, Japan, comparing the area affected by the presence of the barrier with a nearby natural coastline, and examining differences in physical parameters (depth profiles, sediment granulometry, and erosion on plaster balls) and benthic community composition.
4. Significant differences in depth profiles, sediment granulometry, and erosion were found, suggestive of alterations in water energy levels (lower than controls on the landward side of the barrier, and higher on the seaward side).
5. The benthic community was also clearly affected, with almost no living corals growing over the blocks or in their proximity.
6. Overall, the data show how breakwaters can affect the physical environment and benthic communities in a subtropical coral reef ecosystem, with negative consequences for coral survival.

     

The effects of sediment deposits from Namibian diamond mines on intertidal and subtidal reefs and rock lobster populations

• 1. Extensive diamond mining occurs on land and in the sea on the west coasts of South Africa and Namibia, raising fears that diamond‐mining activities may impact commercial rock‐lobster fisheries and benthic communities. To explore this possibility, the effects of the diamond‐mining fines‐discharge on intertidal and subtidal rocky‐shore communities and on the population structure of the rock lobster Jasus lalandii were assessed at Elizabeth Bay.
• 2. Sampling over six years at sites covering a range of wave exposures compared impacted sites with comparable reference sites never exposed to the fines. Percentage cover and densities of benthic organisms were recorded on both intertidal and subtidal reefs. Rock‐lobster abundance was estimated from counts and catch‐per‐unit‐effort, and their length frequencies and sex ratios compared in impacted and reference areas.
• 3. The deposition of fines had no effect at wave‐exposed sites, but did impact intertidal and subtidal communities at sheltered localities where fines accumulated because wave action was insufficient to disperse them. Reductions of grazers, proliferation of algae and increased dominance by filter‐feeders were recorded at the impacted sites and persisted throughout the monitoring programme. Differences in community structure associated with different levels of wave exposure were, however, greater than those produced by depositing fines. The detected effects of fines‐deposits on the benthos were local and likely to be reversible after cessation of mining.
• 4. The fines‐deposit had no detectable effects on the sex‐ratio, size or abundance of rock lobsters, indicating that there is no conflict between the deposition of fines and the fishery for rock lobsters, although substantial inter‐site variability makes it difficult to regard the results as definitive.

Copyright © 2002 John Wiley & Sons, Ltd.     

Monitoring shallow methane‐derived authigenic carbonate: Insights from a UK Marine Protected Area

1. Methane‐derived authigenic carbonate (MDAC) is a biogenic rocky substrate formed by microbial assemblages below the seabed. It performs important ecosystem functions, including the provision of reef‐like habitats on soft sediments and the sequestration of carbon.
2. The protection of MDAC is limited at the global scale; however, 27 marine protected areas (MPAs) have been designated in European waters for ‘cold seep’ MDAC, mainly in shallow waters (<200 m). Few studies have been conducted on these habitats from a conservation perspective.
3. The effective management of MDAC structures requires an understanding of their ecology and physical characteristics in a healthy condition. This is best achieved using a multidisciplinary approach to provide evidence on predefined aspects of MDAC structures, termed feature attributes, which can be assessed to determine habitat condition over time.
4. This article presents the first UK effort to develop a multidisciplinary approach to monitoring shallow MDAC feature attributes, using the Croker Carbonate Slabs Special Area of Conservation (SAC) as a case study. A range of remote and physical survey methods were used to characterize the MDAC and associated relatively unimpacted and healthy biological communities.
5. The data confirm that the SAC contains the largest known area of shallow MDAC in European waters, that methane release is ongoing, and that MDAC is still likely to be forming. Specialized chemoautotrophic fauna were not recorded, possibly due to the dominance of fauna that derive carbon (ultimately) from photosynthesis. Five epifaunal taxa were found to be associated with MDAC, but not with the surrounding sediments.
6. The broad multidisciplinary survey allowed a detailed characterization of shallow MDAC but was resource intensive. We recommend a low‐resource monitoring strategy to deliver cost‐effective and robust evidence for condition assessment and suggest further studies to contextualize future interpretations of change.

     

A brachiopod biotope associated with rocky bottoms at the shelf break in the central Mediterranean Sea: Geobiological traits and conservation aspects

1. In the Recent, brachiopods only seldom occur in benthic communities. A biotope dominated by Megerlia truncata was identified in 2013 by exploration of the south‐easternmost Adriatic margin by Remotely Operated Vehicle (ROV).
2. Emerging rocky substrates next to the shelf break at approximately 120 m appear intensively exploited by this eurybathic rhynchonelliformean brachiopod, attaining a population of more than 300 individuals per m².
3. Calcareous red algae are almost ubiquitous at this site and preferentially encrust sectors of the substrate where brachiopods are minimal.
4. This Megerlia biotope is a novel finding for this part of the Mediterranean Sea, similar to a situation previously observed in the Western Basin, off the Mediterranean French coast.
5. It is proposed that this remarkable brachiopod biotope and the adjacent rhodolith bed are considered important for conservation management.

     

Using ecological trajectories to track long-term taxonomic and functional changes in benthic shallow soft-bottom communities (Bay of Saint-Brieuc,English Channel)

1. Taxonomic and functional trajectories of benthic assemblages were studied in shallow soft-bottom sediments in the bay of Saint-Brieuc (Western English Channel). Changes were assessed at different spatial and temporal scales using a macrobenthic dataset based on 38 stations sampled in 1987 and 2019, coupled with data from one station sampled annually between 2005 and 2019 as part of the European Water Framework Directive monitoring programme.
2. Taxonomic trajectories indicated 1) changes in the structure and distribution of benthic assemblages, 2) an homogenization of the assemblages, and 3) significant functional shifts.
3. Fishing activities and nutrient enrichment are probably strong drivers of the observed changes, as suggested by the higher mortality rate of fragile, flexible, tubiculous and burrowing species, and the increase in the abundance of opportunistic species in the assemblages. Certain populations of macroinvertebrates seem jointly controlled by climate change and by the aforementioned local factors of disturbance.
4. The Community Trajectory Analysis framework appears as a new and interesting method to track ecological changes in marine ecosystems by measuring change with respect to a baseline state, to help define ecological recovery (station returning to the initial ecological state) and departure (station presenting increased changes over time), and to analyse trajectory similarity.
5. According to the degradation of habitat over time, we identify the need for the implementation of knowledge-based conservation strategies, especially within Natura 2000 sites.

     

Actual status of the sea urchin Diadema aff. antillarum populations and macroalgal cover in marine protected areas compared to a highly fished area (Canary Islands—eastern Atlantic Ocean)

• 1. The aim was to determine the status of subtidal rocky benthic assemblages in three marine protected areas (MPAs) of the Canary Islands: (1) La Graciosa; (2) Mar de Las Calmas; (3) La Palma. Sea urchin (Diadema aff. antillarum) populations and non‐crustose macroalgal cover were surveyed, and used as an indicator of conservation status in the three MPAs as well as in a highly fished area (HFA‐Tenerife Island).
• 2. Comparing characteristics between each MPA and the HFA, and considering issues of management and design, it was concluded that the three MPAs each have a different conservation status. ‘Mar de Las Calmas’ marine reserve was found to have the most desirable conservation status, followed by ‘La Palma’ marine reserve based on sea urchin populations and non‐crustose macroalgae assemblages.
• 3. Conversely, ‘La Graciosa’ had the highest density of D. aff. antillarum and the lowest cover of non‐crustose macroalgae out of the three MPAs. Values were comparable to those at the HFA, which shows ‘La Graciosa’ to have the undesired conservation status.
• 4. Different spatial distribution patterns of non‐crustose macroalgal as well as different algal composition cover were observed between the three MPAs and the HFA. These differences were principally attributed to the intensity of grazing activity of the key herbivore D. aff. antillarum. It is suggested that the different study areas correspond to different phase shifts that imply differing resilience of systems that should be taken into a count in future conservation strategies.

Copyright © 2007 John Wiley & Sons, Ltd.     

Evaluating the vulnerability of coralligenous epifauna to macroalgal invasions

1. This work constitutes the first comprehensive study of the epifaunal response to biological invasions in coralligenous habitats, which are one of the main hotspots of biodiversity in the Mediterranean.
2. The epifaunal community inhabiting the invasive macroalga Rugulopteryx okamurae and other dominant sessile hosts on coralligenous habitats (i.e. the sponge Spongia lamella, the gorgonian Paramuricea clavata, and the macroalga Sphaerococcus coronopifolius) was characterized. A total of 137 taxa were found.
3. There was a lack of functional equivalence between macroalgal species (both native and invasive) and sessile invertebrates. Despite the absence of significant differences in mean density values and number of species per replicate among host species, epifaunal composition on gorgonians and sponges differed significantly from that on both macroalgae.
4. Epifaunal assemblages, especially those inhabiting macroalgal species, were dominated by generalist detritivorous species that can inhabit different hosts, while specialized interactions between mobile epifauna and sessile hosts were observed almost exclusively on sessile invertebrates. Moreover, epifaunal community associated with invertebrate hosts showed higher spatial heterogeneity in comparison with native and invasive macroalgae.
5. A competitive displacement of native hosts by the spreading of R. okamurae on coralligenous habitats would likely result in a biotic impoverishment in terms of overall number of species and a taxonomical and functional homogenization of the epifaunal community. Specialist species with a heterogeneous distribution could be gradually replaced by a spatially homogeneous assemblage dominated by generalist species.

     

Effectiveness of acoustic cameras as tools for assessing biogenic structures formed by Sabellaria in highly turbid environments

1. Accurately mapping the extent and status of biogenic reefs formed by polychaete worms of the genus Sabellaria is of conservation importance given their protected status across Europe.
2. Traditionally, side‐scan sonar (SSS) combined with ground‐truthing in the form of seabed photography and videography has been widely accepted as the most suitable approach for mapping these reefs in the subtidal zone. In highly turbid environments visibility at the seabed can be near zero, however, rendering optical‐based ground‐truthing redundant. Consequently, the true distribution and status of Sabellaria reefs in some shallow subtidal areas around the UK remains unclear despite their designation as Annex‐I features of several Special Areas of Conservation (SACs) under the Habitats Directive.
3. Acoustic camera imagery (ACI) collected using acoustic cameras in two deployment configurations matched well with the backscatter signatures of seabed features in corresponding SSS data. The ACI was of suitable resolution for visualizing Sabellaria colony structures, allowing for their Annex‐I ‘reef’ defining attributes (extent, patchiness, and elevation) to be assessed. Colony formation ‘type’ was also distinguishable in the ACI, although confidence in differentiating between low‐lying Sabellaria formations and surrounding substrates was low, particularly when using a pole‐mounted configuration.
4. This study provides a proof of concept for using acoustic cameras as tools for ground‐truthing SSS interpretation and assessing the status of Sabellaria bioconstructions in low‐visibility environments. Further development of this approach and incorporating it into statutory monitoring programmes could improve the management of the reef habitats in subtidal areas of the Severn Estuary and other highly turbid environments.

     

Long‐term changes of marine subtidal benthic communities in North East Asia (Yellow and Japan seas) in a global change context: A review

1. A review of the long‐term changes and variations in benthic communities and the current status of the marine invasive species (MIS) in shallow waters of the Yellow Sea (Chinese sector) and the Sea of Japan (Russian and partly Korean sectors) is presented. This paper reflects on the progress and lessons learned, recommending actions for the future about the conservation of biodiversity.
2. In the Bohai Sea, the benthic ecosystem has been degenerating due to anthropogenic activities such as overfishing and pollution since the 1950s. The dominant position of K‐strategy species is gradually being lost and replaced by R‐strategy species. In the Yellow Sea, the macrobenthic community is different from other areas due to the Yellow Sea Cold Water Mass. Many economic species have been destroyed, and the biotic structure has changed significantly due to overfishing and climate change.
3. In the Russian sector of the Sea of Japan, the macrobenthic communities in the shallow‐water soft bottom have generally been in a stable condition for the last decades, except for some heavily polluted or disturbed areas due to dredging operations. The abundance of select large invertebrate species has changed considerably due to commercial fishing and poaching. Variations in macro? and meiobenthic communities under aquaculture conditions have occurred on a local scale during the last five decades.
4. MIS show obvious differences between China and Russia in the following aspects: introduction pathways of MIS, composition and number of non‐native species, threats and impacts of MIS to native communities and ecosystems, and economic and public health impacts.
5. Long‐term monitoring programmes should be developed to reveal future biotic changes and to separate the effects of cyclic variations of benthic communities from the impacts of pollution and eutrophication. Standardization of sampling procedures is required to compare changes/alternations in benthos across various regions worldwide.

     

Rescue and relocation of benthic organisms during an urban‐port development project: Port of Manzanillo,case study

1. The present study originated with the expansion of the boardwalk within the urban and port area of Manzanillo, México. Prior to civil works related to the placement of tetrapods, surveys of potential sites for the relocation of benthic organisms in alternative areas were carried out.
2. Based on indicators of the physical–chemical environment and biotic factors, nine areas with potential for relocation were evaluated. The areas of greatest potential were associated with environments located away from the influence of the port environment.
3. A total of 13,559 benthic organisms belonging to 68 species associated with three main substratum types (rocky, sandy, and mixed) were collected. There were no differences in the ecological indices between the three substrata.
4. The proximity of the collection area to the influence of port traffic and sources of pollution associated with the physical environment could be an important factor that affects ecological indices and the reduction in the abundance of some protected species and species of commercial interest.
5. The success of collection and relocation processes depends on minimizing possible errors, especially during transportation, when overcrowding, handling, and damage resulting from variable physico‐chemical conditions should be avoided.
6. Through a scheme of actions based on ecological principles, management actions, and civil engineering technology, it was possible to carry out mitigation, conservation, and habitat improvement actions in coastal marine environments exposed to anthropogenic impacts.

     

Habitat diversity relative to wave action on rocky shores: implications for the selection of marine protected areas

• 1. Current selection of marine protected areas in South Africa is based on objective criteria including biogeographic representation and habitat heterogeneity. This paper specifically examines rocky shores on the west coast of South Africa to determine whether they are divisible into discrete ‘habitats’ that need independent conservation.
• 2. Seventeen rocky shores spanning the full spectrum of wave exposure were compared in terms of maximum wave forces, biomass, species richness and diversity among zones and sites. Three biotic assemblages were identified, characterizing sheltered, semi‐exposed to exposed, and very exposed habitats. Differences among these were clear‐cut low on the shore but disappeared at the top of the shore where wave action was attenuated and desiccation uniformly intense.
• 3. The recognition of three discrete biologically‐defined habitats means that rocky shores cannot be regarded as a uniform habitat for conservation purposes. All three components need protection if the full spectrum of rocky‐shore communities is to be conserved.
• 4. It is argued that this approach allows habitats to be defined in an objective manner, and that once this has been done, habitat heterogeneity constitutes a better measure of conservation value of an area than a ‘hotspot’ approach based on species richness and endemism.

Copyright © 2008 John Wiley & Sons, Ltd.     

Illegal ingegno fishery and conservation of deep red coral banks in the Sicily Channel (Mediterranean Sea)

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A generic framework to assess the representation and protection of benthic ecosystems in European marine protected areas

1. There is concern across the International Council for the Exploration of the Sea (ICES) region that a consideration of vulnerable components and the wider support mechanisms underpinning benthic marine ecosystems may be lacking from the process of marine protected area (MPA) designation, management and monitoring.
2. In this study, MPAs across six European ecoregions were assessed from a benthic ecology perspective. The study included 102 MPAs, designated by 10 countries, and focused on three aspects regarding the role of the benthos in: (i) the designation of MPAs; (ii) the management measures used in MPAs; and (iii) the monitoring and assessment of MPAs.
3. Qualitative entries to a questionnaire based on an existing framework (EU project ‘Monitoring Evaluation of Spatially Managed Areas’, (MESMA) were collected by 19 benthic experts of the ICES Benthic Ecology Working Group. A pedigree matrix was used to apply a numerical scale (score) to these entries.
4. The results showed clear differences in scores between ecoregions and between criteria. The designation‐phase criteria generally achieved higher scores than the implementation‐phase criteria. Poor designation‐phase scores were generally reiterated in the implementation‐phase scores, such as scores for assessment and monitoring.
5. Over 70% of the MPA case studies were found to consider the benthos to some extent during selection and designation; however, this was not followed up with appropriate management measures and good practice during the implementation phase.
6. Poor spatial and temporal coverage of monitoring and ineffective indicators is unlikely to pick up changes caused by management measures in the MPA. There is concern that without adequate monitoring and adaptive management frameworks, the MPAs will be compromised. Also, there could be an increased likelihood that, with regard to the benthos, they will fail to meet their conservation objectives.
7. This assessment was successful in highlighting issues related to the representation and protection of the benthos in MPAs and where changes need to be made, such as expanding the characterization and monitoring of benthic species or habitats of interest. These issues could be attributable to an ongoing process and/or an indication that some MPAs only have ‘paper protection’.

     

New invasive predator reduces the abundance of native prey in a cold-temperate marine fouling community

1. Invasive species threaten the conservation of marine environments, and urgent management strategies are needed to prevent their introduction, establishment and spread. Specifically, marine invasive predators destabilize ecological interactions and alter community structure and function. However, most of the evidence showing the effect of these predators is restricted to a few species and regions, while for others the information remains scarce.
2. This study experimentally evaluated the ecological effects of the sea slug Pleurobranchaea maculata, a recently introduced invasive predator, on the fouling communities of a cold-temperate port in the South-western Atlantic.
3. The results show that increasing predation pressure reduces significantly the abundance of sea anemones, which are among the preferred prey items.
4. This study reveals new evidence to help better understand the effects of P. maculata on the biological communities of a recently invaded region. Furthermore, it provides the first experimental evidence supporting the hypothesis that marine invasive predators can induce a significant decrease in the abundance of native species in benthic communities of cold-temperate marine environments in the South-western Atlantic.

     

A new synthetic index and a protocol for monitoring the status of Posidonia oceanica meadows: a case study at Sanremo (Ligurian Sea,NW Mediterranean)

• 1. The status of a Posidonia oceanica meadow in front of the town of Sanremo, Italy, was studied through a combined use of benthic mapping and synthetic indices.
• 2. Mapping was accomplished by integrating side scan sonar imagery and data collected by scuba diving along transects placed perpendicularly to the coastline. A thematic map (scale 1:5000) was produced. Extent of the meadow, occurrence of dead matte areas, and morphology of the lower limit (with new definition) are all described.
• 3. Two synthetic environmental indices were applied to transect data in order to quantify the status of the meadow: the Conservation Index and the Substitution Index. The former is related to the proportion of dead matte; the latter is a novel index measuring the amount of replacement of the ‘constructional’ seagrass P. oceanica by the ‘non‐constructional’ seagrass Cymodocea nodosa. The potential of a ‘phase shift’ in Ligurian Sea seagrass meadows is discussed.
• 4. The approach here proposed, based on detailed mapping plus synthetic indices, may provide immediate information to evaluate the state of Mediterranean Posidonia oceanica for monitoring and management.

Copyright © 2006 John Wiley & Sons, Ltd.     

Essential fish habitats and hotspots of nekto‐benthic diversity and density in the western Mediterranean

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A spatio‐temporal long‐term assessment on the ecological response of reef communities in a Caribbean marine protected area

1. Coral reef biodiversity is rapidly decreasing as a result of the loss of coral cover, which modifies the structure and functioning of the ecosystem. Understanding how coral reef communities respond in space and over the long term is essential in order to implement management strategies and reduce the effects of biodiversity loss on coral reefs.
2. Fish, coral, and algae communities were used as indicators to evaluate changes in coral reef systems. The variation of these communities was studied in a marine protected area composed of three management zones in Cozumel Coral Reef National Park in Quintana Roo, Mexico, over a period of 11 years (2004–2014). The following parameters were monitored annually: (i) total fish density; (ii) fish trophic group densities; (iii) species richness and three fish diversity indices; (iv) relative scleractinian coral cover; and (v) relative macroalgae cover.
3. In the years in which coastal development, such as the construction of a marina, took place, an increase in the abundance of territorial herbivorous and planktivorous fish was observed. As the coral recovered, macrocarnivores and sessile benthic invertivores were re‐established, whereas scraper herbivores showed no changes in the period of study in any of the three management zones.
4. Coral cover recovery showed rapid phase‐shift reversal (phase‐shift, macroalgae dominance over coral) in the three zones. Even though the fish density and coral cover recovered, the diversity indices of each fish trophic group exhibited a reduction in the three management zones over time.

     

El Niño–Southern Oscillation impacts on jumbo squid habitat: Implication for fisheries management

1. Dosidicus gigas is an ecologically and economically important squid species extensively distributed in the eastern Pacific Ocean. Its habitat is extremely sensitive to climatic and environmental variability.
2. The relationship between habitat pattern of D. gigas and El Niño–Southern Oscillation (ENSO, divided into the El Niño, ENSO-neutral, and La Niña events) was assessed from 1950 to 2015, using a habitat suitability index (HSI) modelling approach including two crucial environmental variables: sea surface temperature (SST) and sea surface height anomaly (SSHA).
3. On the basis of cross-correlation analysis, it showed that both SST anomaly and SSHA were significantly positively related to the ENSO index. Moreover, a significantly negative association was found between the HSI values and the ENSO index.
4. Due to the El Niño events, SST off Peru became higher and sea level rose, resulting in contracted areas of suitable SST and SSHA; consequently, suitable habitats for D. gigas dramatically decreased. In contrast, during the ENSO-neutral and La Niña years, the extent of suitable SST and SSHA increased due to the colder water and lower sea level, and suitable habitat for D. gigas expanded.
5. Moreover, the latitudinal gravity centre of HSI was significantly positively associated with the ENSO index. Relative to the ENSO-neutral and La Niña years, a southward movement of the monthly preferred SST isotherm for D. gigas during the El Niño years could explain the occurrence of more suitable habitats in southern waters off Peru.
6. These findings suggested that the ENSO event plays an important role in regulating environmental conditions off Peru and further affected the spatio-temporal distribution of D. gigas habitat.

     

Historical distribution of freshwater fishes and the reference conditions concept in a large Mediterranean basin

1. The European Water Framework Directive 2000/60/EC (WFD) defines the ecological status of aquatic systems as the deviation between their present biological state and that which would be expected in the absence of any major human disturbance, referred to by the WFD as the ‘reference condition’ (RC). It assumes that their biotic composition should remain balanced and constant over time. This study tested both assumptions against an analysis of the historical distribution of the fish fauna in a large and highly disturbed Mediterranean basin. If fish communities change substantially over time, it will mean that the validity of the RC concept comes into question.
2. Using presence/absence data for historical native fish fauna from the Guadalquivir Basin, distribution changes among sub-basins were quantified by mapping between the nineteenth century and today.
3. The range of two native species (Anguilla anguilla and Salmo trutta) has changed significantly. In addition, the diadromous species assemblage has almost become locally extinct, with the exception of the eel. Finally, most Guadalquivir sub-basins (94.7%) have suffered major changes in the composition of their fish communities, either by losing native species or by adding new non-native species.
4. These results render the definition of any RC unlikely. In Mediterranean areas, the WFD objective of ‘good ecological status’ recovery based on the integrity of aquatic communities is a theoretical rather than a real goal. Nonetheless, the WFD provides an ecological guiding principle that can also be transferred to the conservation of freshwater ecosystems.
5. As an alternative to the RC concept in Mediterranean lotic ecosystems, specific multimetric indices can be used, based on expert criteria, the metrics of which can also relate to the conservation value of water bodies, and not only to their ecological status.