Bat diversity in montane rainforest and shaded coffee under different management regimes in southeastern Chiapas, Mexico

Differences in alpha and beta bat diversity among montane rainforest and five shaded coffee plantations under different management regimes, as well as some environmental factors and vegetation parameters influencing bat richness, were evaluated for the first time in southeastern Chiapas, Mexico. In each site, bats were captured every 2 months from March 2004 to July 2005, with six mist-nets, during two nights, using the capture-recapture method. We captured 2970 individuals of 43 bat species. Montane rainforest had the greatest alpha diversity (H′ = 2.681; n = 37), whereas alpha diversity was similar among coffee plantations (H′ = 2.229-2.364; n = 23-26). The number of frugivorous and nectarivorous species was similar among the sites; the greatest exchange in species composition (beta diversity) occurred for insectivorous bats, which reduce their number in coffee plantations as pesticides are incorporated. Bat richness species was significantly related to the number of vegetation strata, height, and cover of trees. We suggest that coffee plantations could act as corridors, facilitating connection among different elements of the landscape in the Sierra Madre de Chiapas for some frugivorous and nectarivorous bats.     

Grazing promotes dung beetle diversity in the xeric landscape of a Mexican Biosphere Reserve

We analyze the impact of grazing on dung beetle diversity at the Barranca de Metztitlán Biosphere Reserve, a xeric ecosystem in central Mexico with a long history of use by humans. We compared the community structure, as well as the alpha and beta diversity between two cover conditions (open and closed vegetation) that represent the impact of grazing within a habitat, and between habitat types (submountainous and crassicaule scrublands). From 576 samples we collected 75,605 dung beetles belonging to 20 taxa. While mean species richness and diversity were different between habitat types, cumulative species richness was not. The effects of grazing on vegetation structure influenced the cumulative species richness and diversity of dung beetles in the submountainous scrubland, where grazing has created land mosaics of a grassland matrix with scrubland patches. This was not the case in the crassicaule scrubland where the impact of grazing is not as evident. Beta diversity significantly responds to the effects of grazing on habitat conditions. We discuss the ecological factors that may promote these responses by landscape diversity components. We also identify the species that could act as useful indicators to monitor the effect of land management on biodiversity. Our results indicate cattle farming maintains a diversified land mosaic, and these areas support more diverse dung beetle ensembles than homogeneous areas of closed, shrubby vegetation cover. Thus, controlled grazing activity could certainly favour the conservation of dung beetle biodiversity and improve ecosystem functioning by maintaining dung decomposition rates.     

The role of forest structure, fragment size and corridors in maintaining small mammal abundance and diversity in an Atlantic forest landscape

Using the abundance and distribution of small mammals at 26 sites in an Atlantic forest landscape, we investigated how species abundance and alpha and beta diversity are affected by fragment size and the presence of corridors. To account for the variability in forest structure among fragments, we described and minimized the influence of foliage density and stratification on small mammal data. Sites were distributed among three categories of fragment size and in continuous forest. For small and medium-sized categories, we considered isolated fragments and fragments connected by corridors to larger remnants. Small mammal abundance and alpha and beta diversity were regressed against site scores from the first axis of a Principal Component Analysis on forest structure variables. Residuals were used in analyses of variance to compare fragment size and connectivity categories. Forest structure influenced total abundance and abundance of some species individually, but not the diversity of small mammal communities. Total abundance and alpha diversity were lower in small and medium-sized fragments than in large fragments and continuous forest, and in isolated compared to connected fragments. Three species were less common, but none was more abundant in smaller fragments. At least one species was more abundant in connected compared to isolated fragments. Beta diversity showed an opposite relationship to fragment size and corridors, increasing in small and isolated fragments. Results highlight the importance of secondary forest for the conservation of tropical fauna, the hyper-dynamism of small isolated fragments and the potential of corridors to buffer habitat fragmentation effects in tropical landscapes.     

Dissecting habitat loss and fragmentation effects following logging in boreal forest: Conservation perspectives from landscape simulations

Habitat loss and fragmentation are recognized as major threats to biodiversity. Their respective effects, however, are sometimes not well distinguished, even though habitat loss is recognized as the most important source of variation affecting species abundance and richness at the landscape scale. As ‘habitat’ is a species-specific concept (based on species perception of its environment), habitat loss and fragmentation studies should be conducted on a species-specific basis. We here assessed the influence of habitat loss and fragmentation in the context of a boreal forest considering forest clearcutting as an anthropogenic disturbance inducing mature forest loss and fragmentation that has a potential impact on wildlife. Using 16 simulated patterns of mature forest loss and fragmentation and three natural landscapes as replicates, we assessed the respective influence of forest loss and fragmentation on the abundance of 10 bird species common in the boreal forest of eastern Canada. Species–habitat relationships were modeled through habitat use models that were utilized to predict abundance of the 10 species within each combination of loss and fragmentation patterns (3 landscapes × 16 patterns). We used three-way ANOVAs to assess the effects of mature forest loss, fragmentation and replicates (random effect) on species abundance. Our results indicated that: (1) variation in species abundance mostly depended on mature forest loss, followed by static landscape attributes other than cutovers (e.g. streams, lakes, roads) and finally by fragmentation and (2) responses to mature forest loss and fragmentation differed among species, not necessary in relation to the successional status but in relation to their perception of their environment. Decreasing detrimental effects of mature forest loss through conservation of large continuous patches of forest may be suitable to maintain abundances of mature forest bird species. Our results highlight that studies aiming to quantify effects of habitat loss and fragmentation on wildlife should be conducted on a species-specific basis and use several landscape replicates to avoid potentially biased results.     

Bryophytes in a changing landscape: The hierarchical effects of habitat fragmentation on ecological and evolutionary processes

Testing the myriad predictions associated with the community, demographic and genetic impacts of habitat fragmentation remains a high conservation priority. Many bryophyte taxa are ideal model systems for experimentally testing such metapopulation-based and population genetic predictions due to their relatively fast colonisation-extinction rates, high substrate specificity, dominant haploid condition, and diminutive size. Herein, we review the community, demographic and population genetic impacts of habitat fragmentation on bryophytes, highlight the present knowledge gaps, and offer ideas on how experimental studies utilizing bryophytes may be used to address the broader conservation implications associated with fragmented ecosystems. Previous research suggests that dispersal limitation best explains observed patterns of abundance and distribution of bryophytes in some fragmented habitats. However, edge effects influence bryophyte community structure of border habitats especially where abrupt differences in micro-climatic conditions between the matrix and the forest remnant exist, or where the species pool contains members with inherently restricted ecological amplitudes. Existing studies do not agree on the relationship between basic attributes of bryophyte community structure (i.e., species richness and local density), and habitat area and degree of spatial-isolation. Demographic studies are a critical step in structuring conservation strategies, however surprisingly little empirical information exists as to the impacts of habitat fragmentation on plant population dynamics. We propose that bryophytes offer great potential for testing predictions with respect to plant population persistence in spatially-structured landscapes.     

Tree species-mediated spatial patchiness of the composition of microbial community and physicochemical properties in the topsoils of a tropical montane forest

To evaluate the importance of plant-soil feedbacks in forest ecosystems, it is fundamental to understand the spatial range within which plant species control soil physicochemical and microbial properties. We investigated the spatial pattern of soil properties associated with canopy trees in a tropical montane forest on Mt. Kianbalu, Borneo. We analyzed soil physicochemical properties and microbial communities (biomarker lipid abundance) as a function of soil depth and distance from the tree trunk of a conifer (Dacrydium gracilis) or a broadleaf tree (Lithocarpus clementianus). The concentration of condensed tannins and fungi-to-bacteria were higher beneath Dacrydium than beneath Lithocarpus. Furthermore, carbon-degrading enzyme activities were lower beneath Dacrydium. These effects of the tree species were more distinct on soil properties beneath the tree crown than on those outside the tree crown. These effects appeared to be largely due to differences in litter chemistry, and the distinct set of soil properties formed corresponding to the above canopy crown. In conclusion, the species-rich forest on the tropical mountain contains spatially distinct units of soil properties associated with canopy trees, and this spatial pattern can influence ecosystem dynamics in the forest through plant-soil feedback effects.     

Bats in a fragmented landscape: Species composition, diversity and habitat interactions in savannas of Santarém, Central Amazonia, Brazil

Species response to forest fragmentation may strongly vary according to ecological requirements, shape, spatial configuration and connectivity of fragments, and the structure of the surrounding matrix. Bats are natural candidates for studies on forest fragmentation. However, the conclusions of such studies are often contradictory. We present the results of a study on the effects of forest fragmentation on bat communities in Alter do Chão, Santarém area, in Central Amazonia, Brazil, an area composed by forests and fragments surrounded by savanna-like vegetation. We compared the species composition between habitats, tested the effect of size, shape and density of trees of forested areas on the presence species and their relative frequency of captures, and investigated the savannas as an ecological barrier for the dispersion of bats. With an effort of 5678 mistnet-hours, we captured 3740 bats (64 species). Multidimensional Scaling indicated no strong separation between the habitats sampled, however, savanna sites were grouped distinctly of fragments and forest sites. Multiple linear regressions indicated no significant correlation between the number of bat species recorded and the size, shape or tree density in forest sites and fragments. There was a significant correlation between the number of captures and the variables tested, explained by the shape of the sites, but not by size or tree density. In general, sites with bigger shape indices had fewer captures. Ten of the 20 most captured species showed no significant difference between the three habitats. The bat communities in Alter do Chão were not strongly affected by forest fragmentation, and the savannas did not appear to act as an ecological barrier to bats.     

Tree species effects on soil enzyme activities through effects on soil physicochemical and microbial properties in a tropical montane forest on Mt. Kinabalu, Borneo

Tree species influence on the soil mineralization process can regulate overall nutrient cycling in a forest ecosystem, which may occur through their effects on substrate quality, soil physicochemical properties and soil microbial community. We investigated tree species effects on soil enzyme activities in a tropical montane forest on Mt. Kinabalu, Borneo. Specifically, we analyzed C- and P-degrading enzyme activities, as well as the relationships among the enzyme activities, soil physicochemical properties, substrate quality (C, N, and P concentrations), and microbial composition in the top 5 cm soils beneath conifers (Dacrycarpus imbricatus and Dacrydium gracilis) and broadleaves (Lithocarpus clementianus, Palaquium rioence, and Tristaniopsis clementis). Activities of acid phosphatase and β-d-glucosidase were significantly different among the tree species. Soil moisture, total C and N content and microbial lipid abundance (a proxy for microbial composition) could influence the enzyme activities although the relative contributions of microbial composition to the enzyme activities might be smaller. A higher acid phosphatase activity beneath Dacrydium than those beneath the other tree species can compensate for a lower concentration of P in available fractions beneath Dacrydium. This localized mineralization activity could subsequently influence soil nutrient availability in this forest.     

Herpetofauna diversity and microenvironment correlates across a pasture-edge-interior ecotone in tropical rainforest fragments in the Los Tuxtlas Biosphere Reserve of Veracruz, Mexico

We evaluated the relationship between amphibian and reptile diversity and microhabitat dynamics along pasture-edge-interior ecotones in a tropical rainforest in Veracruz, Mexico. To evaluate the main correlation patterns among microhabitat variables and species composition and richness, 14 ecotones were each divided into three habitats (pasture, forest edge and forest interior) with three transects per habitat, and sampled four times between June 2003 and May 2004 using equal day and night efforts. We measured 12 environmental variables describing the microclimate, vegetation structure, topography and distance to forest edge and streams.After sampling 126 transects (672 man-hours effort) we recorded 1256 amphibians belonging to 21 species (pasture: 12, edge: 14, and interior: 13 species), and 623 reptiles belonging to 33 species (pasture: 11, edge: 25, and interior: 22 species). There was a difference in species composition between pasture and both forest edge and interior habitats. A high correlation between distance to forest edge and temperature, understorey density, canopy cover, leaf litter cover, and leaf litter depth was found. There was also a strong relationship between the composition of amphibian and reptile ensembles and the measured environmental variables. The most important variables related to amphibian and reptile ensembles were canopy cover, understorey density, leaf litter cover and temperature.Based on amphibian and reptile affinity for the habitats along the ecotone, species were classified into five ensembles (generalist, pasture, forest, forest edge and forest interior species). We detected six species that could indicate good habitat quality of forest interior and their disappearance may be an indication of habitat degradation within a fragment, or that a fragment is not large enough to exclude edge effects. Different responses to spatial and environmental gradients and different degrees of tolerance to microclimatic changes indicated that each ensemble requires a different conservation strategy. We propose to maintain in the Los Tuxtlas Biosphere Reserve the forest remnants in the lowlands that have gentler slopes and a deep cover of leaf litter, a dense understorey, and high relative humidity and low temperature, to buffer the effects of edge related environmental changes and the invasion of species from the matrix.     

Assessing landscapes: a case study of tree and shrub diversity in the seasonally dry tropical forests of Oaxaca, Mexico and southern Honduras

Tropical dry forests, with their distinct and economically important diversity, are acknowledged conservation priorities because of alarming rates of forest conversion. Whilst it is realised that terrestrial conservation requires an understanding of landscape level patterns of diversity, forests are rarely assessed accordingly. Here we demonstrate that, in the case of the seasonally dry tropical forests of the Pacific watershed of Mesoamerica, landscape level assessment of woody diversity can inform decision making relevant to both between-landscape and within-landscape prioritisation. We report floristic surveys of dry forest landscapes in Oaxaca, Mexico and southern Honduras. It is noted that these forests are floristically similar to other seasonally dry tropical forests in the neotropics. By calculation of Genetic Heat Indices, a relative measure of the concentration of restricted range species in a sample, we determine that the conservation of the tree diversity of the coastal lowlands of Oaxaca should be prioritised over that of southern Honduras. The current conservation status of forested areas in Oaxaca is briefly described. We suggest that the greater degree of anthropogenic disturbance in southern Honduras may explain the relative lack of restricted range species there. We argue that some forest fallows can act as analogues of mature forest and therefore landscape elements other than mature forest need to be included in forest conservation assessments. We conclude that diversity sampling of any forest type should not be limited to mature forests, but extended to other elements of forested landscapes.     

Plant biomass, soil water content and soil N:P ratio regulating soil microbial functional diversity in a temperate steppe: A regional scale study

Soil microorganisms are influenced by various abiotic and biotic factors at the field plot scale. Little is known, however, about the factors that determine soil microbial community functional diversity at a larger spatial scale. Here we conducted a regional scale study to assess the driving forces governing soil microbial community functional diversity in a temperate steppe of Hulunbeir, Inner Mongolia, northern China. Redundancy analysis and regression analysis were used to examine the relationships between soil microbial community properties and environmental variables. The results showed that the functional diversity of soil microbial communities was correlated with aboveground plant biomass, root biomass, soil water content and soil N: P ratio, suggesting that plant biomass, soil water availability and soil N availability were major determinants of soil microbial community functional diversity. Since plant biomass can indicate resource availability, which is mainly constrained by soil water availability and N availability in temperate steppes, we consider that soil microbial community functional diversity was mainly controlled by resource availability in temperate steppes at a regional scale.