Boreal pine forest floor biogenic volatile organic compound emissions peak in early summer and autumn

In boreal forests, canopy-scale emissions of biogenic volatile organic compounds (BVOCs) are rather well characterised, but knowledge of ecosystem-scale BVOC emissions is still inadequate. We used adsorbent tubes to measure BVOCs from a boreal Scots pine (Pinus sylvestris L.) forest floor in southern Finland and analysed the compounds with a gas chromatograph-mass spectrometer. The most abundant compound group was the monoterpenes (averaging 5.04 μg m⁻² h⁻¹), in which α-pinene, Δ³-carene and camphene contributed over 90% of the emissions. Emissions of other terpenoids (isoprene and sesquiterpenes) were low (averaging 0.05 and 0.04 μg m⁻² h⁻¹, respectively). BVOC emissions from the forest floor varied seasonally, peaking in early summer and autumn, with most of the compounds following similar patterns. The emission pattern was sustained throughout the measurement period, suggesting that the main sources of the emissions remained more or less stable. We compared the BVOC fluxes with environmental parameters such as temperature, precipitation and PAR, and with fluxes of other trace gases (CO₂, CH₄, N₂O), as well as with ground vegetation photosynthesis and with litter input. Several of these parameters were correlated with the presence of BVOCs. The sources of soil BVOC emissions are very poorly understood, but our results suggest, that changes in litter quantity and quality, soil microbial activity and the physiological stages of plants are linked with changes in BVOC fluxes.     

Greenhouse gas emissions from farmed organic soils: a review

Abstract. The large boreal peatland ecosystems sequester carbon and nitrogen from the atmosphere due to a low oxygen pressure in waterlogged peat. Consequently they are sinks for CO₂ and strong emitters of CH₄. Drainage and cultivation of peatlands allows oxygen to enter the soil, which initiates decomposition of the stored organic material, and in turn CO₂ and N₂O emissions increase while CH₄ emissions decrease. Compared to undrained peat, draining of organic soils for agricultural purposes increases the emissions of greenhouse gases (CO₂, CH₄, and N₂O) by roughly 1t CO₂ equivalents/ha per year. Although farmed organic soils in most European countries represent a minor part of the total agricultural area, these soils contribute significantly to national greenhouse gas budgets. Consequently, farmed organic soils are potential targets for policy makers in search of socially acceptable and economically cost-efficient measures to mitigate climate gas emissions from agriculture. Despite a scarcity of knowledge about greenhouse gas emissions from these soils, this paper addresses the emissions and possible control of the three greenhouse gases by different managements of organic soils. More precise information is needed regarding the present trace gas fluxes from these soils, as well as predictions of future emissions under alternative management regimes, before any definite policies can be devised.     

Evolution of volatile sulfur compounds from soils treated with sulfur-containing organic materials

Release of volatile S compounds from soils treated with S-containing organic materials was studied by sensitive gas chromatographic techniques. Methyl mercaptan, dimethyl sulfide, dimethyl disulfide, carbonyl sulfide and carbon disulfide were identified as gaseous products of decomposition of animal manures, sewage sludges and plant materials in soils under aerobic or waterlogged conditions. No release of hydrogen sulfide was detected. Most of the S volatilized from soils treated with sludges was in the form of dimethyl sulfide and dimethyl disulfide. whereas most of the S volatilized from soils treated with manures and plant materials was in the form of methyl mercaptan and dimethyl sulfide. More S compounds were released, and more S was volatilized, by decomposition of manures, sludges or plant materials in soils under waterlogged conditions than by decomposition under aerobic conditions. When calculated as a percentage of the S added as organic material, the average amount of S volatilized under aerobic or waterlogged conditions was < 0.2% < 0.5% and < 3.4% for the sludges, manures and plant materials, respectively. The five volatile S compounds produced by decomposition of manures, sludges and plant materials in soils under aerobic and waterlogged conditions also were produced by decomposition of plant proteins (zein, gluten and gliadin). It is concluded that the volatile S compounds released by decomposition of the above organic materials in soils are largely, if not entirely, produced by microbial degradation of methionine and cystine in these materials.     

Volatile organic compound (VOC) emissions from soil and litter samples

The production of nonmethane volatile organic compounds (VOCs) by soil microbes is likely to have an important influence on soil ecology and terrestrial biogeochemistry. However, soil VOC production has received relatively little attention, and we do not know how the emissions of microbially-produced VOCs vary across soil and litter types. We collected 40 root-free soil and litter samples from a diverse array of ecosystem types and conducted laboratory incubations in order to compare the types and quantities of VOCs emitted. VOC production rates were higher in litter samples than in soil samples, and the rates were correlated with microbial biomass and CO₂ production levels. On average, the litter samples produced more types of VOCs than the soil samples with litters emitting a number of VOCs (including terpenoids) that were not generally emitted from the soil samples. Across all of the samples, we identified 100 VOCs, and more than 70% of these compounds could not be positively identified by GC/MS analyses. Of those VOCs that could be identified, furfural and similar furan compounds were noteworthy in that they were emitted in large amounts from nearly every sample examined. Other identifiable VOCs produced across a range of soil and litter samples included propanoic and butanoic acids, which are known products of microbial fermentation. Together these results suggest a need for additional research examining the specific factors influencing VOC emissions from soil and the identification of specific VOCs emitted from soil and litter as many of these compounds are likely to have important effects on belowground ecology.     

Molecular changes in organic matter of a compost-amended soil

The molecular changes of organic matter in a cultivated soil after compost amendments was followed by off-line-pyrolysis-TMAH GC-MS. Thermochemolysis of soil and compost provided a detailed molecular characterization of soil organic matter (SOM) by releasing a large amount of different molecules mainly derived from plant biopolymers such as lignin, waxes and bio-polyesters. No significant differences were found before and after 1 year of cultivation in the pyrolytic products released by control soil, which were mainly fatty acids, oxidized forms of lignins, and minor amounts of microbial bio-products and biopolyesters derivatives. Conversely, significant qualitative and quantitative variations were found in the molecular characteristics of SOM between control and compost-amended soils after 1 year of cultivation. Increasing amounts and diversified components of fatty acids, n -alkanes and various biopolyesters derivatives such as hydroxy-alkanoic and alkandioic acids were found in the compost-amended soil. These results indicate that a significant amount of exogenous compost-derived organic molecules were incorporated into SOM after 1 year of cultivation. The organic structural indexes derived from these results indicated direct inputs of undecomposed lignin residues and hydrocarbon waxes from compost material. When compared with the control soil, small but significant amounts of plant biomarkers, such as cyclic di- and triterpenes derivatives, were found only in the compost-amended soil. These findings suggest that the molecular changes of SOM brought about by amendment with biomass residues can be followed by using thermochemolysis of bulk soil samples.     

Nitrous oxide emissions from boreal organic soil under different land-use

Nitrous oxide emissions were studied with a static chamber technique during 2 years from a drained organic soil in eastern Finland. After drainage, the soil was forested with birch (Betula pendula Roth) and 22 years later, part of the forest was felled and then used for cultivation of barley (Hordeum vulgare L.) and grass. The annual N₂O emissions from the cultivated soil (from 8.3 to 11.0 kg N₂O-N ha⁻¹ year⁻¹) were ca. twice the annual emission from the adjacent forest site (4.2 kg N₂O-N ha⁻¹ year⁻¹). The N₂O emissions from the soils without plants (kept bare by regular cutting or tilling) were also lower (from 6.5 to 7.1 kg N₂O-N ha⁻¹ year⁻¹) than those from the cultivated soil. There was a high seasonal variation in the fluxes with a maximum in spring and early summer. The N₂O fluxes during the winter period accounted for 15-60% of the total annual emissions. N₂O fluxes during the snow-free periods were related to the water table (WT) level, water-filled pore space, carbon mineralisation and the soil temperature. A linear regression model with CO₂ production, WT and soil temperature at the depth of 5 cm as independent variables explained 54% of the variation in the weekly mean N₂O fluxes during the snow-free periods. N₂O fluxes were associated with in situ net nitrification, which alone explained 58% of the variation in the mean N₂O fluxes during the snow-free period. The N₂O-N emissions were from 1.5 to 5% of net nitrification. The acetylene blockage technique indicated that most of the N₂O emitted in the snow-free period originated from denitrification.     

What predicts nitrous oxide emissions and denitrification N-loss from European soils?

N₂0 emissions and denitrification N-losses. precipitation, air temperature, soil moisture, bulk density and content of mineral N were monitored in 9 different agricultural soils in 6 European countries throughout the vegetation period (April to September) 1992 and 1993. N₂O emissions and denitrification N-losses were log-normal distributed, reflecting high temporal changes. While small flux rates (< 2 g N ha^?1 d^?1) were detectable every day, high rates (> 10 g N ha^?1 d^?1) were measured after fertilization. An attempt to relate the emission variables to climate and soil variables was made through the use of correlation analysis. The mean N₂0 emissions from soil were significantly correlated with the soil properties clay, organic C and mineral N content and the amount of applied mineral N fertilizer. The best prediction of the N₂O emission rates (r² = 0.734) was achieved by multiple linear regression using the soil parameter clay and mineral N. Only 50% of the observed variation could be explained by the factors C_org and mineral N, which describe the substrate availability for microbial processes. No successful statistical model was found for the prediction of denitrification N-losses.     

Quantifying greenhouse gas emissions from soils: Scientific basis and modeling approach

Abstract

Global climate change is one of the most important issues of contemporary environmental safety. A scientific consensus is forming that the emissions of greenhouse gases, including carbon dioxide, nitrous oxide and methane, from anthropogenic activities may play a key role in elevating the global temperatures. Quantifying soil greenhouse gas emissions is an essential task for understanding the atmospheric impacts of anthropogenic activities in terrestrial ecosystems. In most soils, production or consumption of the three major greenhouse gases is regulated by interactions among soil redox potential, carbon source and electron acceptors. Two classical formulas, the Nernst equation and the Michaelis–Menten equation, describe the microorganism-mediated redox reactions from aspects of thermodynamics and reaction kinetics, respectively. The two equations are functions of a series of environmental factors (e.g. temperature, moisture, pH, Eh) that are regulated by a few ecological drivers, such as climate, soil properties, vegetation and anthropogenic activity. Given the complexity of greenhouse gas production in soils, process-based models are required to interpret, integrate and predict the intricate relationships among the gas emissions, the environmental factors and the ecological drivers. This paper reviews the scientific basis underlying the modeling of greenhouse gas emissions from terrestrial soils. A case study is reported to demonstrate how a biogeochemical model can be used to predict the impacts of alternative management practices on greenhouse gas emissions from rice paddies.     

Controls on nitric oxide emissions from tropical pasture and rain forest soils

In field studies, forest soils in the Atlantic Lowlands of Costa Rica emitted greater amounts of nitric oxide (NO) than soils from pastures that had been actively grazed for over 20 years following their conversion from forest. We measured NO production from intact soil cores from these land uses. Laboratory tests using ammonium(NH ₄ ⁺ ), nitrate (NO ₃ ^– ), nitrite (NO ₂ ^– ), water, and acetylene (C₂H₂) additions demonstrate a response consistent with field studies.Forest soil cores produced more NO than pasture cores regardless of treatment. In forest soil the response toNH ₄ ⁺ solution was significantly greater than response to water or an ambient moisture control. Addition of 10 kPa C₂H₂ caused a marked decrease in NO production in forest soil cores. These responses suggest a nitrification-linked control over NO production. Large and rapid responses toNO ₂ ^– additions suggest that chemical decomposition of this ion may contribute to NO production. Pasture soil cores did not show a significant response to any of the treatments including NO ₂ ^– . Low porosity in the pasture soils may restrict emission of NO produced therein.     

Nitrous oxide and methane fluxes from organic soils under agriculture

Trace gas fluxes of N₂O and CH₄ were measured weekly over 12 months on cultivated peaty soils in southern Germany using a closed chamber technique. The aim was to quantify the effects of management intensity and of soil and climatic factors on the seasonal variation and the total annual exchange rates of these gases between the soil and the atmosphere. The four experimental sites had been drained for many decades and used as meadows (fertilized and unfertilized) and arable land (fertilized and unfertilized), respectively. Total annual N₂O-N losses amounted to 4.2, 15.6, 19.8 and 56.4 kg ha^–1 year^–1 for the fertilized meadow, the fertilized field, the unfertilized meadow and the unfertilized field, respectively. Emission of N₂O occurred mainly in the winter when the groundwater level was high. At all sites maximum emission rates were induced by frost. The largest annual N₂O emission by far occurred from the unfertilized field where the soil pH was low (4.0). At this site 71% of the seasonal variation of N₂O emission rates could be explained by changes in the groundwater level and soil nitrate content. A significant relationship between N₂O emission rates and these factors was also obtained for the other sites, which had a soil pH between 5.1 and 5.8, though the relation was weak (R² = 15–27%). All sites were net sinks for atmospheric methane. Up to 78% of the seasonal variation in CH₄ flux rates could be explained by changes in the groundwater level. The total annual CH₄-C uptake was significantly affected by agricultural land use with greater CH₄ consumption occurring on the meadows (1043 and 833 g ha^–1) and less on the cultivated fields (209 and 213 g ha^–1).     

Labile ester sulphate in organic matter extracted from podzolic soils

Summary We studied the effect of soil pretreatment, molecular-weight fractionation, and K₂SO₄ addition on the concentration and biochemical stability of ester sulphate in soil organic matter. A labile ester sulphate fraction (8.1 g S g^–1 soil) was detected in the organic matter extracted from a sulphate-rich podzolic sandy loam. This fraction was susceptible to loss during soil pretreatment with water and KCl solution and subsequent extraction of organic matter from the soil. The low-sulphate loam was low in labile ester sulphate (0.6 g S g^–1 soil) and the pretreatments had little effect. The addition of K₂SO₄ to the organic matter extracted from the low-sulphate soil resulted in the formation of appreciable amounts of labile ester sulphate. Newly formed ester sulphate tends to be biochemically less stable than indigenous ester sulphate in soil humic polymers and the ester sulphate associated with the low molecular-weight fractoin of soil organic matter appears to be more susceptible to loss by enzymatic hydroylsis. The results were interpreted in terms of steric effect. Ester sulphate groups bound to external surfaces of soil humic polymers may be easily accessible to sulphatase enzyme and thus readily mineralizable during incubation or extraction of soil organic matter at low soluble-sulphate levels. Sulphate groups on inner surfaces of the organic polymers are shielded from the enzyme due to size exclusion and hence more stable.     

Biochemical properties and biodegradation of dissolved organic matter from soils

Various biologically mediated processes are involved in the turnover of dissolved organic matter (DOM) in soil; however, relatively little is known about the dynamics of either the microbial community or the individual classes of organic molecules during the decomposition of DOM. We examined the net loss of DOC, the mineralisation of C to CO₂ and the degradation of DOC from six different soils by soil microorganisms. We also quantified the changes in the concentrations of protein, carbohydrate and amino acid C during microbial biodegradation. Over a 70-day incubation period at 20°C, the mineralisation of DOC to CO₂ was described by a double exponential model with a labile pool (half-life, 3–8 days) and a stable pool (half-life, 0.4–6 years). However, in nearly all cases, the mass loss of DOC exceeded the C released as CO₂ with significant deviations from the double exponential model. Comparison of mass DOC loss, CO₂ production and microbial cell counts, determined by epifluorescence microscopy, showed that a proportion of the lost DOC mass could be accounted for by microbial assimilation. Carbohydrate and protein C concentrations fluctuated throughout the incubation with a net change of between 3 to 13 and −30 to 22.4% initial DOC, respectively. No amino acid C was detected during the incubation period (level of detection, 0.01 mg C l⁻¹).     

Mineralization and volatile loss of nitrogen from soils treated with coal combustion byproducts

There is an increasing need to find a suitable means for disposal of coal combustion byproducts because of the increasing world-wide production of these byproducts. This need has prompted interest in the use of land disposal, but there are concerns that this use may degrade the quality of soil. To determine the influence of coal combustion byproducts on the transformation and fate of soil N and assess the potential impact of land disposal on soil quality, we studied the effects of two combustion byproducts (fly ash and bed ash) applied at rates of 22.5, 45, 90, and 180 Mg ha^-1 on mineralization and volatile loss of N from soil. Studies comparing the influence of the byproducts on these processes showed that whereas fly ash had little influence on the fate of soil N, bed ash caused substantial mineralization of organic soil N and volatile loss of this N as NH₃. Studies monitoring the pH of soils treated with bed ash showed that soil pH increased immediately after this treatment, with values reaching as high as 12.8. These studies indicated that such extreme alkaline conditions caused chemical degradation and volatile loss of as much as 10% of the organic N in soil, and they provide strong evidence that the improper disposal of bed ash on land can have a substantial negative impact on soil quality.     

Impacts of irrigation methods on greenhouse gas emissions/absorptions from vegetable soils

Journal of Soils and Sediments - Recently, N2O, CO2, and CH4 have been gaining attention as major greenhouse gases (GHGs) that contribute to global warming. Agricultural water-saving irrigation...     

Inhibition of nitrification in soils by volatile sulfur compounds

Carbon disulfide, dimethyl disulfide, methyl mercaptan, dimethyl sulfide, and hydrogen sulfide retard nitrification of ammonium in soils incubated in closed systems. The inhibitory effects of these volatile sulfur compounds on nitrification decrease in the order listed. Hydrogen sulfide is a relatively weak inhibitor of nitrification, but carbon disulfide is considerably more effective than patented nitrification inhibitors (N-Serve. AM, and ST) for inhibition of nitrification in closed systems.It is concluded from the work reported that the inhibitory effects of methionine, cystine, cysteine, and other nonvolatile organic sulfur compounds on nitrification in soils may be at least partly due to decomposition of these compounds by soil microorganisms with formation of volatile sulfur compounds that retard nitrification.     

Soluble organic nitrogen in agricultural soils

 The existence of soluble organic forms of N in rain and drainage waters has been known for many years, but these have not been generally regarded as significant pools of N in agricultural soils. We review the size and function of both soluble organic N extracted from soils (SON) and dissolved organic N present in soil solution and drainage waters (DON) in arable agricultural soils. SON is of the same order of magnitude as mineral N and of equal size in many cases; 20–30 kg SON-N ha^–1 is present in a wide range of arable agricultural soils from England. Its dynamics are affected by mineralisation, immobilisation, leaching and plant uptake in the same way as those of mineral N, but its pool size is more constant than that of mineral N. DON can be sampled from soil solution using suction cups and collected in drainage waters. Significant amounts of DON are leached, but this comprises only about one-tenth of the SON extracted from the same soil. Leached DON may take with it nutrients, chelated or complexed metals and pesticides. SON/DON is clearly an important pool in N transformations and plant uptake, but there are still many gaps in our understanding. Received: 10 June 1999     

Use of 13C and 15N natural abundance techniques to characterize carbon and nitrogen dynamics in composting and in compost-amended soils

Isotope fractionation during composting may produce organic materials with a more homogenous δ¹³C and δ¹⁵N signature allowing study of their fate in soil. To verify this, C, N, δ¹³C and δ¹⁵N content were monitored during nine months covered (thermophilic; >40 °C) composting of corn silage (CSC). The C concentration reduced from 10.34 to 1.73 g C (g ash)⁻¹, or 83.3%, during composting. Nitrogen losses comprised 28.4% of initial N content. Compost δ¹³C values became slightly depleted and increasingly uniform (from −12.8±0.6‰ to −14.1±0.0‰) with composting. Compost δ¹⁵N values (0.3±1.3 to 8.2±0.4‰) increased with a similar reduced isotope variability.The fate of C and N of diverse composts in soil was subsequently examined. C, N, δ¹³C, δ¹⁵N content of whole soil (0-5 cm), light (<1.7 g cm⁻³) and heavy (>1.7 g cm⁻³) fraction, and (250-2000 μm; 53-250 μm and <53 μm) size separates, were characterized. Measurements took place one and two years following surface application of CSC, dairy manure compost (DMC), sewage sludge compost (SSLC), and liquid dairy manure (DM) to a temperate (C₃) grassland soil. The δ¹³C values and total C applied (Mg C ha⁻¹) were DM (−27.3‰; 2.9); DMC (−26.6‰; 10.0); SSLC (−25.9‰; 10.9) and CSC (−14.0‰; 4.6 and 9.2). The δ¹³C of un-amended soil exhibited low spatial (−28.0‰±0.2; n=96) and temporal (±0.1‰) variability. All C₄ (CSC) and C₃ (DMC; SSLC) composts, except C₃ manure (DM), significantly modified bulk soil δ¹³C and δ¹⁵N. Estimates of retention of compost C in soil by carbon balance were less sensitive than those calculated by C isotope techniques. One and two years after application, 95 and 89% (CSC), 75 and 63% (SSLC) and 88 and 42% (DMC) of applied compost C remained in the soil, with the majority (80-90%) found in particulate (>53 μm) and light fractions. However, C₄ compost (CSC) was readily detectable (12% of compost C remaining) in mineral (<53 μm) fractions. The δ¹⁵N-enriched N of compost supported interpretation of δ¹³C data. We can conclude that composts are highly recalcitrant with prolonged C storage in non-mineral soil fractions. The sensitivity of the natural abundance tracer technique to characterize their fate in soil improves during composting, as a more homogeneous C isotope signature develops, in addition to the relatively large amounts of stable C applied in composts.