Pathogenic races of soybean rust Phakopsora pachyrhizi collected in Tsukuba and vicinity in Ibaraki,Japan

Six races were identified among 26 single-lesion isolates of Phakopsora pachyrhizi from rust-infected leaves of nine samples of cultivated soybean and one sample of the wild host plant kudzu (Pueraria lobata) collected in Tsukuba and vicinity in Ibaraki, Central Honshu, Japan. Six races were detected on soybean cultivars and four races on kudzu. When two or more isolates obtained from the same samples were examined, the isolates were different races except from two samples. These results indicate that two or more races may be distributed on the same soybean cultivar and that the same races share soybean and kudzu hosts.     

Antagonistic activity of Bacteria from the chickpea rhizosphere againstFusarium Oxysporum f. sp.Ciceris

The antagonistic activity againstin vitro growth ofFusarium oxysporum f. sp.ciceris was determined for 74 bacterial isolates obtained from the rhizosphere of chickpeas grown in two field soils with different histories of Fusarium wilt, and for seven isolates ofPseudomonas spp. from culture collections. Twenty-four isolates ofBacillus spp. andPseudomonas chlororaphis 30-84 showed a strong antagonism against three races (0, 1 and 5) ofF. o. ciceris tested. Three selectedBacillus isolates andP. chlororaphis 30-84 were further tested against 30 isolates of races 0, 1 and 5 ofF. o. ciceris, races 0, 1 and 2 ofF. o. melonis, F. o. phaseoli and nonpathogenicF. oxysporum. Bacillus isolates differed in their antagonistic activity and were less inhibitory to mycelial growth ofF. o. ciceris than to that of other fungal isolates. Furthermore, the extent of growth inhibition ofF. o. ciceris was influenced both by bacterial isolates and by race of the pathogen. Cell-free culture filtrates of fourBacillus isolates inhibited conidial germination and hyphal growth ofF. o. ciceris and nonpathogenicF. oxysporum. Joint seed+soil treatment with some selected antagonisticBacillus spp. isolates suppressed disease caused by the highly virulentF. o. ciceris race-5 in cv. ICCV 4 and cv. PV 61 chickpeas. However, the degree of protection was influenced by the host genotype and the inoculum concentration of the pathogen.     

Incidence and pathogenicity of races and isolates of Verticillium dahliae in Crete, southern Greece

Classification of 32 Verticillium dahliae isolates originating from 19 plant species in eight different botanical families to races and determination of host range pathogenicity were carried out. The physiological races of isolates were identified using the two differential tomato cultivars ??Belladonna?? (susceptible to both races 1 and 2 of V. dahliae) and ??Ace 55VF?? (resistant to race 1, susceptible to race 2 of V. dahliae). Among these isolates, 14 were race 2 (43.8%), 12 race 1 (37.5%) and six nonpathogenic (18.7%) on tomato. The host range pathogenicity of isolates was determined using four differential hosts (eggplant, turnip, tomato (Ve ^? ) and sweet pepper). Among isolates, five were pathogenic to both eggplant and turnip (15.6%), 21 to eggplant, turnip and tomato (65.6%), five to eggplant, turnip, tomato and sweet pepper (15.6%) and one was pathogenic to eggplant, turnip and sweet pepper (3.2%). The pathogenicity of isolates on the aforementioned five hosts was investigated on the basis of external symptoms and by calculating the relative areas under disease progress curves (relative AUDPC). Results showed that eggplant was the most susceptible, followed by turnip and tomato cv. Belladonna, while sweet pepper and tomato cv. Ace 55VF were less susceptible to all the isolates used. The pathogenicity of isolates varied from highly to mildly virulent on eggplant and turnip while on Belladonna, Ace 55VF and sweet pepper it varied from highly virulent to nonpathogenic. Belladonna exhibited a similar level of susceptibility to races 1 and 2 of V. dahliae, but was more susceptible than Ace 55VF to race 2. Interestingly, the isolates originating from eggplant were clearly more virulent than those originating from tomato and black nightshade on all solanaceous plants tested.     

Fusarium oxysporum f. sp. lycopersici races and their genetic discrimination by molecular markers in West Mediterranean region of Turkey

Fusarium oxysporum f. sp. lycopersici (FOL) races and F. oxysporum f. sp. radicis lycopersici (FORL), the causal agents of root rot and crown rot diseases, respectively, cause serious economic losses in tomato greenhouses where production is intensive in the West Mediterranean region of Turkey. The isolates were collected from West Mediterranean region of Turkey and were characterized by specific primers based on three races (r1, r2, r3), besides pathogenicity tests in in vivo conditions Additionally, a scheme was developed using newly tested ISSR and SRAP markers to a genotyping database and to determine the possible origin of these pathogens. The present study provided new information on these pathogens based on their races and their dominant existence in this region that has not been reported before. Genetic diversity detected in the same races of the pathogen may be associated with difficulties in controlling the pathogen and a possible resistance formation effort exerted by the pathogen to chemicals used in plant protection in tomato greenhouses. Molecular analyses indicated genetic diversity in pathogen isolates identified as r3, r2 and FORL, which may be associated with abiotic stress to which the pathogens were exposed.     

Pathogenicity and vegetative compatibility grouping among Indian populations of Fusarium oxysporum f. sp. ciceris causing chickpea wilt

Thirty-nine isolates of Fusarium oxysporum f. sp. ciceri – the causal agent of chickpea (Cicer arietinum) wilt – collected from different parts of India and representing eight races of the pathogen, were analyzed for virulence and classified on the basis of vegetative compatibility grouping (VCG). The wilt incidence ranged from 24% to 100% on a highly susceptible cultivar JG 62. Six isolates, from Delhi, Gujarat, Karnataka, Punjab and Rajasthan and belonging to six different races of the pathogen, caused 100% wilt incidence. Five isolates belonging to four different races, namely, Foc 143 from Andhra Pradesh, Foc 161 from Chhattisgarh, Foc 146 from Karnataka, Foc 158 from Madhya Pradesh and Foc 50 from Rajasthan, caused low wilt incidence. For VCG analysis, nitrate non-utilizing mutants (nit) were obtained by culturing wild-type isolates on 2.5% potassium chlorate and selecting resistant sectors. Complementary nit mutants were paired in all possible combinations to determine varying degrees of heterokaryon formation within the isolates, which showed that most of the isolates were self-compatible. Pairing of all the mutants showed that the isolates included in the present study belonged to a single VCG (0280). Thus, in spite of variability in the virulence, the Indian populations of the pathogen have only one VCG.     

Races of <Emphasis Type="Italic">Magnaporthe oryzae</Emphasis> in Australia and genes with resistance to these races revealed through host resistance screening in monogenic lines of <Emphasis Type="Italic">Oryza sativa</Emphasis>

Rice blast is the most serious disease threat to rice production worldwide. It is difficult to control due to the complex diversity and wide geographic distribution of the causal pathogen Magnaporthe oryzae. In Australia, rice blast occurs in northern Australia but remains exotic to the main south-eastern rice growing area; however, there is the potential for rice blast to threaten this area; in addition, rice production is currently expanding from south-eastern Australia into northern Australia, which makes rice blast a major concern and challenge to rice industry in Australia. Prior to this study, there was lack of information on the race status of M. oryzae present in Australia and on how to manage the disease through host resistance. The races of rice blast isolates collected in northern Australia was characterised based on the disease reactions of eight standard rice differentials used in an international race differential system. The following studies revealed genes conferring resistance to these races through investigating the responses of 25 monogenic rice lines with targeted resistance gene against different races. The rice blast isolates were characterised into five races: IA-1, IA-3, IA-63, IB-3 and IB-59. Genes Pi40, Piz-t, Pi9, Pi5(t) and Pi12(t) exhibited resistance to all the isolates belonging to five races. In addition, two genes showed complete resistance to multiple races, viz. Pi9 that showed complete resistance to races IA-1, IA-3, IA-63 and IB-3 and Pita2 that had complete resistance to races IA-3, IB-3 and IB-59. This study provides information about the races of M. oryzae in Australia. Genes identified conferring resistance to multiple races will not only streamline the identification via molecular markers of imported rice varieties with resistance to rice blast in Australia, but will also allow the Australian rice breeding program to develop new varieties with broad-spectrum resistance to rice blast and pyramid multi-gene resistance into Australian rice varieties.     

Genetic variability among breeding lines and cultivars of eggplant against Fusarium oxysporum f. sp. melongenae from Turkey

Seventy isolates of Fusarium oxysporum (Schlechtend: Fr.) f. sp. melongenae Matuo and Ishigami (Fomg), the causal agent of eggplant Fusarium wilt, were tested for their interaction with different lines and cultivars to determine whether there was race-specific interaction. Also, a total of 13 cultivars were tested under greenhouse conditions to evaluate the presence of resistance to Fusarium wilt. The disease severity (%) and the area under disease progress curve (AUDPC) for each of the Fomg isolates were calculated by scale values. Results showed that neither of the resistant lines (LS1934 and LS2436) exhibited wilting symptoms, whereas susceptible local cultivars (cvs. ‘Kemer’ and ‘Hadrian’) displayed severe disease symptoms. There was no significant variation in the virulence, indicating the occurrence of a race or races among 70 Fomg isolates tested on resistant lines and susceptible cultivars. This may indicate a genetically homogeneous population structure of Fomg in Turkey. The eggplant cultivars Amadeo, Anatolia, Angela, Brigitte, Corsica, Hawk, Koksal, Nouma, Sharapova and Yula exhibited various degrees of susceptibility to three virulent Fomg isolates, but disease severity for AGR-703 was significantly different and lower among the tested eggplant cultivars, as well as rootstocks. Therefore, it is considered as the most appropriate for rootstock purposes in eggplant cultivations where Fusarium wilt is present in the soil.     

Regional Distribution of Two Races of <Emphasis Type="Italic">Phialophora gregata </Emphasis>f. sp. <Emphasis Type="Italic">adzukicola, </Emphasis>Causal Agent of Brown Stem Rot of Adzuki Bean,and Their Genetic Diversity on Hokkaido,Northernmost Island of Japan

The distribution of two races (1 and 2) of Phialophora gregata f. sp. adzukicola, the causal agent of brown stem rot of adzuki bean, was examined using a total of 483 isolates obtained from 39 fields in 19 locations on Hokkaido, Japan between 1997 and 1999. Race 1 was predominant (416 isolates or 86.1%) in the commercial fields tested. Race 2 was found in 25 fields (64.1%), including two fields of cultivar Kita-no-otome (resistant to race 1, but susceptible to race 2), indicating that race 2 was widely distributed in most of the production areas in Hokkaido. Using amplified fragment length polymorphisms (AFLP), a total of 67 polymorphic AFLP markers was recorded among 72 representative isolates (37 and 35 isolates of races 1 and 2, respectively), and 57 distinct haplotypes were detected. Cluster analysis revealed no close correlation between races and AFLP groups. Thus, no difference was observed between values of gene diversity in each race (0.253 and 0.284 in races 1 and 2, respectively), and the coefficient of gene differentiation was very low (G _ST =0.015). Gene differentiation between both races by analysis of molecular variance was not significantly different from zero (Φ=−0.001; p=0.403). However, the results of gene differentiation among regional populations (G _ST =0.290, Φ=0.292; p<0.001) are not necessarily consistent with the result that isolates from the same district were generally not tightly clustered. Received 15 April 2002/ Accepted in revised form 6 September 2002     

Races of <Emphasis Type="Italic">Phytophthora infestans</Emphasis> isolated from potato in Hokkaido,Japan

The virulence of 29 isolates of Phytophthora infestans collected in potato fields in Hokkaido, Japan, in 2013 and 2014, was tested for race identification. Thirteen different races were identified, each of which had five to eight virulence factors. All of the isolates caused a virulent reaction against plants with R1 and R7, and most of the isolates caused a virulent reaction against plants with R3, R4, R10, and R11. On the other hand, no isolate was virulent against plants with R9. These results demonstrate that the current Japanese P. infestans population is more complex than the population in the 1990s from the viewpoint of race.     

Physiological races and vegetative compatibility groups within Fusarium oxysporum f.sp. gladioli

The pathogenicity and vegetative compatibility of mainly Dutch isolates ofFusarium oxysporum collected from diseased gladioli and other Iridaceae were investigated. Based on their pathogenicity to two differential gladiolus cultivars, the isolates could tentatively be divided into two races. All self-compatible isolates ofFusarium oxysporum f.sp.gladioli belonged to one of three distinct vegetative compatibility groups, VCG 0340, 0341 or 0342, and were incompatible with isolates that were not pathogenic to gladiolus. Isolates of one of the two races were restricted to one VCG while isolates of the other race were present in all three VCGs.     

Multigene phylogenetic analysis of inter- and intraspecific relationships in <Emphasis Type="Italic">Venturia nashicola</Emphasis> and <Emphasis Type="Italic">V. pirina</Emphasis>

Isolates of Venturia species isolated from pear in Japan, China, Taiwan and Israel were used in this study to analyze their molecular phylogenetic relationship. The nucleotides of rDNA-ITS, partial β-tubulin and elongation factor 1α genes were sequenced directly after PCR. Based on these sequence data two phylogenetic groups could be distinguished. Isolates collected from Asian pears such as Japanese and Chinese pears formed a distinct evolutionary lineage from those derived from European and Syrian pears. This result corroborated the early taxonomic separation of V. nashicola from V. pirina. In addition, trees from single-locus data sets and the combined data set showed that all isolates of V. nashicola were included in a monophyletic group and representative isolates of five pathological races originating from different locations and cultivars formed a single lineage. In contrast, two distinct evolutionary lineages were revealed in V. pirina and isolates of five races were scattered in two lineages. Israeli isolates of race 2 as well as two Japanese isolates of V. pirina formed a distinct lineage from other isolates of this species, while other Israeli isolates belonging to races 1, 3, 4, and 5 were closely related to each other and formed another lineage. It was indicated that the evolution of pathological races in V. nashicola might have occurred relatively recently as compared with V. pirina.     

大豆疫霉根腐病菌生理小种鉴定及毒性分析

对采自黑龙江省、吉林省的42株大豆疫霉根腐病茵进行生理小种鉴定，其中11株可被分别鉴定为1号、3号和8号生理小种。1号小种为优势小种，3号、8号小种为国内首次报道。其余31株在鉴别寄主上出现中间类型反应无法鉴定小种，但可以划分为12个毒性类型，病原茵群体具有很高的毒性多态性，其中有些菌株毒性较强。     

福建省辣椒疫霉菌群体结构表型特征分析

为了明确福建省辣椒疫霉菌群体遗传结构的表型特征,对分离自福建省15个市(县)的300株辣椒疫霉菌的交配型、甲霜灵敏感性及生理小种进行了测定。结果显示,288株为A2交配型,12株为A1交配型,出现频率分别为96%和4%,以A2占优势,在各采集点均有分布。263株对甲霜灵表现敏感,28株为中间型,9株为抗性,分别占总体的87.67%、9.33%和3.00%,甲霜灵敏感菌株为主要菌系。根据菌株对辣椒疫霉菌生理小种鉴别寄主的致病性测定结果,可将辣椒疫霉菌划分为3个生理小种,其中168株为小种3,126株为小种2,6株为小种1,分别占56%、42%和2%,小种3为福建辣椒疫霉菌优势小种。     

Physiological races of Fusarium oxysporum f.sp. melonis in Tunisia

Fusarium wilt of melon, caused by Fusarium oxysporum f.sp. melonis (Fom), is an important disease; races of the pathogen were identified by inoculating differential standard host cultivars. A total of ten isolates that were obtained from 23 fields located in four different geographical regions were identified as pathogenic. Results indicate that all four known Fom races, namely, 0, 1, 2 and 1.2, were found in north and middle Tunisia. Race 1.2 was the most prevalent.     

2009年黑龙江和吉林省马铃薯晚疫病菌表型结构研究

为明确2009年黑龙江和吉林两省马铃薯主产区晚疫病菌的表型特征,本研究对所采晚疫病菌的交配型、甲霜灵抗性及生理小种分别进行了测定.结果表明:被测黑龙江(46株)和吉林(48株)两省的菌株均为 A1 交配型.黑龙江省被测菌株甲霜灵高抗、敏感菌株各占50％;吉林省被测菌株中高抗、敏感菌株分别占70.8％、29.2％;两省均未发现中抗菌株.其中采自吉林敦化菌株均为高抗菌株,采自吉林榆树的菌株均为敏感菌株,甲霜灵抗/感比例地区间差异明显.在被测33个黑龙江菌株中发现24个生理小种,而吉林49个菌株中发现19个生理小种,其中9个生理小种两省共有.另外,两省被测菌株中还发现了18株“超级毒力小种”.因此,建议加强种薯监测,防止 A2交配型传入;在生产上使用甲霜灵类药剂防治马铃薯晚疫病应该以菌株的抗性监测数据为依据;进一步加强生理小种监测,合理布局抗病品种.     

Phylogenetic relationships between the lettuce root rot pathogen Fusarium oxysporum f. sp. lactucae races 1, 2, and 3 based on the sequence of the intergenic spacer region of its ribosomal DNA

The genetic relationship between the vegetative compatibility groups (VCGs) and between physiological races of Fusarium oxysporum f. sp. lactucae (FOL), the causal pathogen of lettuce root rot, was determined by analyzing the intergenic spacer (IGS) region of its ribosomal DNA. A total of 29 isolates containing a type strain were tested: 24 Japanese isolates, 2 Californian isolates, and 3 Italian isolates. Three races (races 1, 2, and 3) were found in Japan, and race 1 was also distributed in California and Italy. Races 1, 2, and 3 each belonged to a distinct VCG: VCG-1, VCG-2, and VCG-3 (VCG-3-1, VCG-3-3), respectively. Phylogenetic (neighbor-joining) analysis of the IGS sequences revealed that races 1, 2, and 3 coincided with three phylogenetic groups (PG): PG-1, PG-2, and PG-3, respectively. These results indicate that the three races are genetically quite different and have a strong correlation with VCGs and phylogenetic groupings. The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under the accession no. AB195218     

Outcome of sexual reproduction in the <Emphasis Type="Italic">Phytophthora infestans</Emphasis> population in Estonian potato fields

In this study, the Estonian population of Phytophthora infestans was characterized with mating type, sensitivity to metalaxyl, virulence on 11 potato R-gene differentials and 12 SSR markers to show the outcome of potential sexual reproduction in the population. During the three years 2010–2012, 141 P. infestans isolates, collected from 23 potato fields, showed quite a high and stable frequency of the A2 mating type, 48% of the total population. In 87% of all sampled potato fields, both mating types were recorded, suggesting continuous sexual reproduction of P. infestans and possible oospore production. Metalaxyl-sensitive isolates prevailed in all three years (68 out of 99 isolates). Amongst the 95 isolates tested, 51 virulence races were found. The race structure was diverse, and most pathotypes were unique, appearing only once; the two most common pathotypes, 1.2.3.4.6.7.10.11 and 1.2.3.4.7.10.11, comprised 35% of the population. The P. infestans population was genetically highly diverse and most of the multilocus genotypes (MLGs) appeared only once. Furthermore, all of the MLGs appeared in only one of the three sampling years. Our results confirm that the high diversity in the Estonian P. infestans population is most likely the result of frequent sexual reproduction, which benefits the survival, adaptability and diversity of the pathogen in the climate of North-Eastern Europe.     

辽宁丹东地区稻瘟病菌生理小种的研究

 用两套鉴别品种,即中国鉴定品种和日本的清泽品种,对丹东地区水稻瘟病菌小种进行鉴定。用中国品种把80个单孢分离菌分成12个小种,用清泽品种将83个单孢分离菌分出成34个小种。当地优势小种是日本的307小种和中国的ZF₁小种。在丹东现在明确了病菌侵染的抗病基因是Pi-ta²。
高抗又高产的品种中花8号和中花9号,对多数小种是高抗的,但对日本小种577.3和577.7易感染。这两个小种在丹东地区出现的频率较低,因此中花8号和中花9号这两个品种在1-2年之内,不会丧失抗性。