Trait–environment relationships in Amazon stream fish assemblages

Studies of trait–environment relationships provide important tools for the prediction of the response of biological communities to environmental alterations. The Amazon basin presents enormous potential for the development of research on this type of relationship, given the diversity of both its fish fauna and the aquatic ecosystems this fauna inhabits. The present study investigated the association between local environmental variables and the functional traits of fish in 54 streams of six major Amazonian basins. We identified the relationship between the characteristics of the streams (channel morphology, channel habitat units, riparian vegetation cover, large woody fragments and instream cover for aquatic organisms) and fish traits related to locomotion, habitat use and feeding behaviour. The fish fauna of the broader, deeper and more slowly flowing streams was dominated by nektobenthic species that exploit autochthonous resources such as fish and invertebrates. In narrow, fast‐flowing streams, by contrast, there was a predominance of benthic fishes with varying feeding habits, including periphytivorous and invertivorous species. Narrow, shady streams were inhabited by nektonic species adapted for the exploitation of resources from the marginal vegetation. The results of this study contribute to the understanding of the association between the functional structure of fish assemblages and local environmental variables in Amazonian streams. We hope that these findings will stimulate further research into the natural variation in stream fish assemblages that will ensure the development of more effective management strategies that better protect these important aquatic ecosystems.     

Large‐scale patterns of fish diversity and assemblage structure in the longest tropical river in Asia

Although the Mekong River is one of the world's 35 biodiversity hot spots, the large‐scale patterns of fish diversity and assemblage structure remain poorly addressed. This study aimed to investigate the fish distribution patterns in the Lower Mekong River (LMR) and to identify their environmental determinants. Daily fish catch data (i.e. from December 2000 to November 2001) at 38 sites distributed along the LMR were related to 15 physicochemical and 19 climatic variables. As a result, four different clusters were defined according to the similarity in assemblage composition and 80 indicator species were identified. While fish species richness was highest in the Mekong delta and lowest in the upper part of the LMR, the diversity index was highest in the middle part of the LMR and lowest in the delta. We found that fish assemblages changed along the environmental gradients and that the main drivers affecting the fish assemblage structure were the seasonal variation of temperature, precipitation, dissolved oxygen, pH and total phosphorus. Specifically, upstream assemblages were characterised by cyprinids and Pangasius catfish, well suited to low temperature, high dissolved oxygen and high pH. Fish assemblages in the delta were dominated by perch‐like fish and clupeids, more tolerant to high temperatures, and high levels of nutrients (nitrates and total phosphorus) and salinity. Overall, the patterns were consistent between seasons. Our study contributes to establishing the first holistic fish community study in the LMR.     

Spatial and temporal variations in fish larvae assemblages of Ilha Grande National Park,Brazil

For understanding the reproductive dynamics of fish assemblages and their relationship with environmental conditions, we need to know more about spawning areas and periods. Studies on temporal and spatial patterns of occurrence of fish eggs and larvae are important for obtaining this kind of information quickly and accurately. In this study, we analysed spatial and temporal patterns of fish larvae in different biotopes in a stretch of the floodplain of Upper Parana River, in Ilha Grande National Park, southern Brazil. We carried out night sampling during six spawning periods, from 2001 to 2008. We selected 18 sampling sites distributed in the mainstream, tributaries and lagoons, encompassing several types of biotopes. We observed significant spatial and temporal differences among biotopes in the composition and structure of the fish larvae assemblages. Lentic environments favoured the development of sedentary and migratory species, whereas tributaries were used as migratory routes and spawning areas. The assemblage in period I differed from the assemblages of other periods, probably because of the presence of dams in the Parana River. No association was observed between environmental variables and spatial and temporal patterns of the ichthyoplankton assemblages. Hence, conservation measures are essential to maintain the environmental integrity of spawning (tributaries) and development areas (lagoons) for the maintenance of biodiversity in the floodplain of Upper Paraná River.     

Effects of anthropogenic disturbances on α and β diversity of fish assemblages and their longitudinal patterns in subtropical streams,China

Identifying the spatial patterns of α and β diversity of biotics is an important yet little‐understood area of basic and applied ecological research. Although the upstream–downstream patterns of α diversity of stream fishes are numerously reported, β diversity has received less attention. In this study, we surveyed fishes along the upstream–downstream gradients in three headwater streams of the Qingyi River, China, which were affected by different extents of human activities. We aimed to assess how anthropogenic disturbances affect α and β diversity of stream fishes and their upstream–downstream patterns. We found that, compared with that in the Shuxi Stream disturbed less, endemic species decreased and cosmopolitan species increased in the Maxi and Puxi Stream disturbed heavily. The streams disturbed heavily showed lower α diversity and higher β diversity than that in the stream disturbed less. This among‐stream variations in fish diversity only occurred at the mid‐downstream, not upstream segments. α diversity increased downstream and β diversity decreased downstream from headwaters to mouth in the stream disturbed less, whereas this upstream–downstream pattern in fish diversity shifted in the streams disturbed heavily, in which both α and β diversity showed the quadratic distributions with the hump‐shape for α diversity and the U‐shape for β diversity respectively. Our results suggest that anthropogenic disturbances cause some cosmopolitan fishes replacing many endemic fishes in upland streams. This replacement processes result in α diversity decreasing and β diversity increasing, and shift the spatial patterns in fish diversity along the upstream–downstream gradient.     

Biodiversity and rarity distributions of native freshwater fish in an agricultural landscape: the importance of β diversity between and within water‐body types

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Spatial and temporal patterns in summer ichthyoplankton assemblages on the eastern Bering Sea shelf 1996–2007

Larval and early juvenile fishes were sampled from the eastern Bering Sea (EBS) shelf from 2001 to 2005, and in 2007. Data from these collections were used to examine spatial and temporal patterns in species assemblage structure and abundance. The years 2001–2005 were unusual because the EBS water temperature was ‘warm’ compared with the long‐term mean temperature. In contrast, 2007 was a ‘cold’ year. The abundance of the five most numerous taxa at 12 stations common to all years sampled (1996–2005, 2007) were significantly different among years. Larval and early juvenile stage Theragra chalcogramma (walleye pollock), a commercially important gadid, were by far the most abundant fish in all years. Bottom depth alone best explained assemblage structure in most years, but in others, bottom depth and water column temperature combined and percent sea‐ice coverage were most important. Abundance of T. chalcogramma larvae increases with water column temperature until 5°C and then becomes level. Higher abundances of Gadus macrocephalus (Pacific cod) larvae occur in years with the greatest percent sea‐ice cover as indicated by GAM analysis. Larvae of Lepidopsetta polyxystra (northern rock sole) increase in abundance with increasing maximum wind speed, but decrease at a later date during the last winter storm. The data are consistent with the hypothesis that oceanographic conditions, specifically water temperature and sea‐ice coverage, affect the spatial and temporal pattern of larval abundances. In general, ichthyoplankton species assemblages can be important early indicators of environmental change in the Bering Sea and potentially other subarctic seas as well.     

Spatial organisation of fish assemblages in the Chishui River,the last free‐flowing tributary of the upper Yangtze River,China

The Chishui River is the last free‐flowing tributary of the upper Yangtze River, China, which has an important role in fish conservation. This study aimed to explore the spatial organisation of fish assemblages in this river. Field sampling was conducted biannually between 2015 and 2017 at 41 sites from its headwater and downstream. One hundred and twenty‐two fish species were captured, including 34 endemic, 15 threatened and six exotic species. Fish assemblages varied significantly along the longitudinal gradient. Based on cluster and ordination analyses, 41 sampling sites could be divided into five site‐groups, corresponding to the headwater, upstream, midstream, downstream and the Xishui‐branch, respectively. The splitting of fish assemblages was consistent with the geographical divisions. However, fish species changed gradually along the longitudinal gradient rather than abruptly, which was consistent with the River Continuum Concept (RCC). In the headwaters and upstream, fish assemblages were mainly dominated by cold‐water and rheophilic species, while in the lower stretches, fish assemblages were dominated by warm‐water and limnophilic species. According to null models, fish assemblages were significantly nonrandomly structured at the basin scale, but randomly structured at the regional scale. This study is an important step in understanding the assembly rules of fish assemblages in this free‐flowing river and provides useful information for future fish conservation and ecological restoration.     

Analysis of retinol, 3‐hydroxyretinol and 3,4‐didehydroretinol in North American farm‐raised freshwater fish liver,muscle and feed

Vitamin A (VA) is an essential micronutrient in fish, vital for reproduction, vision and immunity. Freshwater fish species store and use VA in the form of retinol (ROL), as well as uncommon forms such as 3,4‐didehydroretinol (DROL) and 3‐hydroxyretinol (3ROL). We developed and validated an HPLC method capable of measuring ROL, DROL and 3ROL in the feed and tissues of North American freshwater fish, for which little information on retinoid concentrations is available. DROL and ROL were higher than expected in both fish feed and fish liver (at 9.5–29.6 mg kg^?1 DROL and 26.9–79.2 mg kg^?1 ROL for feed; and 19.8–548.8 μg g^?1 DROL and 10.4–128.8 μg g^?1 ROL for liver). Interestingly, DROL concentrations were lower than ROL in fish feed, but often substantially higher in fish liver. Concentrations of ROL and DROL were similar to each other in muscle. 3ROL was detected in fish liver only. To our knowledge, this is the first publication to measure DROL concentrations in North American farm‐raised fish and commercial fish feed. Monitoring of not only ROL, but DROL and 3ROL as well, may be advisable to better assess the VA content of fish feed and tissue.     

Immunostimulatory effects of dietary poly‐β‐hydroxybutyrate in European sea bass postlarvae

The stable production of high‐quality fry in marine aquaculture is still hampered by unpredictable mortality caused by infectious diseases during larval rearing. Consequently, the development of new biocontrol agents is crucial for a viable aquaculture industry. The bacterial energy storage compound poly‐β‐hydroxybutyrate (PHB) has been shown to exhibit beneficial properties on aquatic organisms such as enhanced survival, growth, disease resistance and a controlling effect on the gastrointestinal microbiota. However, the effect of PHB on the developing immune system of fish larvae has so far not been investigated. In this study, the effect of feeding PHB‐enriched Artemia nauplii on survival, growth and immune response in European sea bass (Dicentrarchus labrax) postlarvae was examined. Amorphous PHB was administered to 28‐day‐old sea bass postlarvae over a period of 10 days. The survival and growth performance were monitored, and the expression of 29 genes involved in immunity, growth, metabolism and stress‐response was measured. While the expression of the insulin‐like growth factor 1 (igf1), an indicator of relative growth, was upregulated in response to feeding PHB, the larval survival and growth performance remained unaffected. After 10 days of PHB treatment, the expression of the antimicrobial peptides dicentracin (dic) and hepcidin (hep) as well as mhc class IIa and mhc class IIb was elevated in the PHB fed postlarvae. This indicates that PHB is capable of stimulating the immune system of fish early life stages, which may be the cause of the increased resistance to diseases and robustness observed in previous studies.     

Mesopelagic fish larval assemblages during El Niño‐southern oscillation (1997–2001) in the southern part of the California Current

Mesopelagic species are the principal constituents of larval fish assemblages inhabiting the southerly California Current region. Seasonal larval abundance is influenced by circulation of the California Current and subtropical Countercurrent, including regional changes of the physical, chemical, and biological characteristics during the El Niño‐Southern Oscillation. This study examines the mesopelagic fish larvae distribution and abundance patterns between seasons and years, with the aim of describing the mesopelagic larval assemblages during dynamic environmental changes induced by El Niño (1997–1998) and the rapid transition to La Niña (1998–2000) along the west coast of the Baja California Peninsula (25–31°N). Despite large oceanographic variability, larval assemblages varied principally on a seasonal basis, related to reproductive periods and the north–south gradient influenced by the seasonal pattern of the California Current. An increased diversity, number of species, and abundance of tropical species was noticeable during the northward expansion of warm‐water taxa during El Niño, principally in the northern areas (Ensenada and Punta Baja). After El Niño, population adjustments and rapid recovery occurred during La Niña conditions, which reflected seasonal differences in the mesopelagic community structure that are closely related to the seasonal pattern of oceanic currents.     

Influence of dietary linoleic acid (18:2n‐6) and α‐linolenic acid (18:3n‐3) ratio on fatty acid composition of different tissues in freshwater fish Songpu mirror carp,Cyprinus Carpio

Six isonitrogenous and isoenergetic purified diets were formulated to feed Songpu mirror carp for 60 days. The control diet (CD) was only supplemented with soybean oil. The other five experimental diets contained soybean oil, linseed oil and lard oil blended at various inclusion levels to attain different linoleic acid (LA)/α‐linolenic acid (LNA) ratios (0.53, 1.04, 2.09, 3.95, 6.82) with a constant total C₁₈ polyunsaturated fatty acids (PUFA; LA+LNA, 2% dry weight) content. The fatty acid (FA) profiles of hepatopancreas, dorsal muscle, intestine, intraperitoneal fat (IPF), spleen and kidney reflected those of the diets, but with some differences. The spleen showed the lowest correlation with diet compared with other tissues, followed by the hepatopancreas (P < 0.05). The intestine and IPF showed relatively higher correlation. On the other hand, the control group had the lowest tissue‐diet correlation, followed by the LA/LNA0.53 group (P < 0.05), whereas the LA/LNA2.09 showed the highest. The LA/LNA ratios in the tissues were up‐regulated in the LA/LNA0.53, 1.04 groups and down‐regulated in the LA/LNA3.95, 6.82 groups. This was due to when LA (or LNA) was highly added in diet, the decrease in this FA was huge in tissue. The contents of saturated fatty acids and monounsaturated fatty acids increased in the control group, but seemed not influenced by dietary LA/LNA ratios. These results demonstrated that the FA deposition was tissue‐specific, and also influenced by the dietary FA composition in the experimental fish. Finally, we suggest that 2.09 is the optimal LA/LNA ratio (2% C₁₈ PUFA) of Songpu mirror carp for fillet FA composition.     

Comparative effect of Freund's adjuvant and Aloe vera L. gel on the expression of TNF‐α and IL‐1β in vaccinated Cyprinus carpio L. with Aeromonas hydrophila C. bacterin

The comparative effects of Freund's and Aloe vera gel as adjuvants on the expression of IL‐1β and TNF‐α genes were studied in vaccinated common carp (Cyprinus carpio) with Aeromonas hydrophila bacterin. Fishes were intraperitoneally immunized with A. hydrophila bacterin in combination with Aloe vera gel or Freund's and also without any adjuvant. At day 28 after immunization, all groups were challenged by lethal dose of A. hydrophila (10⁷ cells/fish). Changes in the expression of IL‐1β and TNF‐α genes were evaluated in anterior kidney before challenge and 12, 24, 72 and 7 days postchallenge using quantitative real‐time PCR. Higher expression levels of both genes were observed in all vaccinated groups compared with non‐immunized group. Fishes which received Aloe vera gel showed higher expression of IL‐1β and TNF‐α in relation to animals which vaccinated with or without Freund's adjuvant. We concluded that Aloe vera gel in compared with Freund's adjuvant had a more stimulatory effect on the expression of immune‐related genes in vaccinated common carp and it can use as a novel adjuvant in aquaculture.     

Characterization of β‐catenin 1 during the gonad development in the common carp (Cyprinus carpio)

β‐catenin gene is a pivotal gene for gonad development and maintenance of ovarian function in mammals. However, little is known about its expression and function in gonad development of fish. In this study, a complete cDNA (3342 bp) sequence of β‐catenin 1 was cloned from the common carp, Cyprinus carpio, by RACE PCR, which encodes a 780‐amino‐acid protein. Quantitative real‐time PCR demonstrated that β‐catenin 1 mRNA expressions were high in the testis and ovary tissue and the expression increased as the testes developed and the early stage ovaries developed. Western blot results revealed a single immunoreactive band with an estimated molecular weight of 90 kDa in testes. Immunohistochemistry analysis revealed that the β‐catenin 1 protein was concentrated mainly in the cytoplasm of early development stage of oocyte cells and in the cytomembrane of developing and mature sperm cells. 17β‐Ethinylestradiol injecting intraperitoneally into the fish decreased the relative β‐catenin 1 mRNA expression level except 1 μg/g 72 hr and 5 μg/g 48 hr of treatments in the ovary by real‐time PCR. These results suggest, for the first time, that β‐catenin 1 is an essential protein in gonad development and might be involved in ovarian early development of C. carpio.     

Enhancement of the innate immune system and disease‐resistant activity in Cyprinus carpio by oral administration of β‐glucan and whole cell yeast

The effects of dietary β‐ (1,3) glucan and whole cell yeast (Sacharomyces uvarum) on the immune response and disease resistance to Aeromonas hydrophila were investigated in Cyprinus carpio. β‐(1,3) glucan was extracted from the yeast. Both β‐(1,3) glucan and whole yeast were incorporated into the diet at 1% level and fed to common carp C. carpio for a period of 60 days. Control and treated fish were exposed to A. hydrophila on the 30th and the 60th day of the experimental period. Dietary supplementation of glucan significantly increased the white blood cell count in fish on the 60th day (2.91±0.04 × 10⁴), and the highest nuetrophil nitro blue tetrazolium (NBT) activity was also observed in glucan‐fed fish (30th day). A consistent increase in neutrophil (NBT) activity was also observed in whole cell fed fish until the end of the experiment. Similarly, β‐(1,3) glucan and whole cell yeast enhanced the serum lysozyme activity from the 15th day onwards but higher activity was reported on the 30th day in glucan and the 60th day in whole cell yeast‐fed fish. Suplementation of β‐(1,3) glucan protected the fish from A. hydrophila infection. Nearly 75–80% of the fish survived pathogen exposure (relative percentage survival). However, only 54–60% survival was observed in the whole cell‐fed fish. β‐(1,3) glucan and whole cell yeast protect the fish from pathogens by enhancing the cellular and humoral immune response in C. carpio.     

Dietary soya allergen β‐conglycinin induces intestinal inflammatory reactions,serum‐specific antibody response and growth reduction in a carnivorous fish species,turbot Scophthalmus maximus L.

This study was conducted to investigate the effects of dietary β‐conglycinin on the growth performance, digestion, gut morphology and immune responses of juvenile turbot (Scophthalmus maximus L.). Four diets were formulated to contain 0%, 2%, 4% and 8% purified β‐conglycinin. Triplicate groups of 30 fish were fed to apparent satiation twice daily for 12 weeks. Fish fed 4% and 8% dietary β‐conglycinin showed significantly reduced specific growth rate, feed efficiency ratio, apparent digestibility coefficient of nutrients and whole‐body lipid contents, as well as a profound infiltration of mixed leucocytes in the lamina propria and a significant decrease in the absorptive surface of distal intestine. The expression of pro‐inflammatory cytokines, TNF‐α and IL‐1β, in the distal intestine was significantly upregulated by 4% dietary β‐conglycinin, whereas a significantly lower expression level of IgM and anti‐inflammatory cytokine TGF‐β1 was observed in fish fed 8% dietary β‐conglycinin. Serum lysozyme and alternative complement pathway activity were first significantly enhanced by 2% dietary β‐conglycinin and then rapidly declined by 4% and 8% dietary β‐conglycinin. Respiratory burst activity of head kidney macrophages and serum superoxide dismutase activity were significantly suppressed by 4% and 8% dietary β‐conglycinin. Dietary β‐conglycinin (2–8%) significantly increased the level of specific antibody against β‐conglycinin in serum. Collectively, these results suggested that higher levels of dietary β‐conglycinin (4–8%) induced a variety of non‐specific and specific immune responses and intestinal mucosal lesions in turbot, resulting in inferior feed utilization and poor growth performance.     

Seasonal changes in hepatosomatic index,gonadosomatic index and plasma estradiol‐17β level in captively reared female rabbit fish (Siganus guttatus)

The seasonal changes in hepatosomatic index (HSI), gonadosomatic index (GSI) and plasma estradiol‐17β (E₂) level in female rabbit fish (Siganus guttatus) were investigated. The relationship between plasma E₂ levels with these indices and ovarian growth was also evaluated. Each month, at least 10 female broodfish were sacrificed to collect liver, ovary and blood for HSI, GSI and plasma E₂, respectively. GSI and HSI were calculated as percentage (%) of relative weight of gonad and liver to total body weight, respectively. Plasma E₂ level was measured using enzyme‐linked immunosorbent assay method (ELISA). Ovaries were cut and stained for histological observation. The results included seasonal changes in plasma E₂ levels, stages of ovarian development, GSI and HSI. The highest level of E₂ was observed in June (1,445.62 pg/ml) and during vitellogenesis (2,305 pg/ml). GSI and HSI values significant fluctuated monthly. The highest HSI and GSI were 1.72% in May and 3.58% in June, respectively. The pattern of plasma E₂ levels showed a relationship with GSI and different stages of ovarian development. HSI was associated with ovarian stages. During vitellogenesis, the highest value (1.9%) of HSI was observed. Histological sections showed that rabbit fish is a multiple spawner. These results contribute to further understanding of female rabbit fish reproductive biology in captivity. Important reproductive parameters such as HSI, GSI and E₂ can be used to indicate maturation status of this fish species.