Variation in root system architecture and drought response in rice (Oryza sativa): Phenotyping of the OryzaSNP panel in rainfed lowland fields

Root growth at soil depths below 30 cm may provide access to critical soil water reserves during drought in rainfed lowland rice. In this study, the OryzaSNP panel, a set of 20 lines representing genetic diversity in rice used for the discovery of DNA sequence polymorphisms, was evaluated for root characteristics in the field over three seasons varying in drought severity. Root length density (RLD) at a depth of 30–45 cm varied up to 74–92% among genotypes under drought stress (2008–2009 dry seasons), ranging from 0.024 to 0.23 cm cm⁻³ in 2008 and from 0.19 to 0.81 cm cm⁻³ in 2009. Real-time monitoring of soil moisture profiles revealed significant differences among genotypes, and these differences were correlated with RLD at those soil depths. Among the lines evaluated, the Aus isozyme group, particularly the genotype Dular, showed greater drought resistance associated with deep root growth and the highest drought response index (less reduction in yield by drought stress). Since the set of genotypes used in this study has been completely sequenced for SNP markers, the phenotypic information on root growth and drought avoidance responses presented here could be used in initial analysis of the genetic basis of dehydration avoidance traits and in facilitating improvement in drought resistance in rice.     

Identifying physiological traits associated with improved drought resistance in winter wheat

The association of specific target traits for drought resistance (early flowering, high accumulation of stem water soluble carbohydrate (WSC) reserves, presence of awns and high green flag-leaf area persistence) with yield performance under late-season drought was analyzed utilizing two doubled-haploid (DH) populations derived from crosses between Beaver × Soissons and Rialto × Spark in two seasons 2000/2001 and 2001/2002. The aim was to quantify associations between target traits and yield responses to drought, and to prioritize traits for drought resistance. Flowering time variation had a neutral effect on the absolute yield loss under drought, suggesting there may be a trade-off between water-saving behaviour in the shorter pre-flowering period with early flowering and a reduced capacity to access water associated with a smaller rooting system. The presence of awns also had a neutral effect on yield loss under drought amongst lines of the Beaver × Soissons population. The potential advantages of awns for increasing water-use efficiency and sensible heat transfer responsible for a cooler canopy appeared to be of less significance under moderate droughts in the UK than under severe droughts in other regions worldwide. The value of large stem soluble carbohydrate reserves for drought environments alone could not be confirmed in the UK environment. Stem WSC was positively associated with grain yield under both irrigation and drought. The genetic trait which showed the clearest correlation with the ability to maintain yield under drought was green flag-leaf area persistence. Averaged across years, the positive phenotypic correlation of this trait with yield under drought amongst DH lines of the Beaver × Soissons population (r = 0.49; p ≤ 0.001) indicated the potential use of this trait as a selection criterion for yield under drought. It is suggested that screens for this trait including marker-assisted selection would have value in future breeding programmes aimed at improving yields in high yielding, rainfed environments, but where drought can also be a problem, such as the UK.     

Influence of the soil physical environment on rice (Oryza sativa L.) response to drought stress and its implications for drought research

Plant performance under drought stress is not solely defined by an inadequate water supply but by an interaction among many factors, including climatic, edaphic, and biological factors. An important interacting factor affecting root growth, and therefore the ability of a plant to access and take up water, is the soil physical environment. Soil penetration resistance can restrict, or even halt, root system growth. For rice, a soil penetration resistance of 1.4 MPa is sufficient to inhibit root system expansion. This review describes the effects of the soil physical environment on root growth and its interaction with drought stress. A large variation in soil penetration resistance exists among rainfed rice-growing areas of South and Southeast Asia and within experimental stations used for managed-drought field phenotyping. This variability may influence genotypic performance across experimental sites/countries and the response of crop genotypes to drought stress. A case study is presented in which differences in the soil physical environment may partially elucidate differences in experimental results between two field studies conducted at different locations. These results highlight the need for increased knowledge of environmental interactions to allow the outputs of genomics to increase drought tolerance at the field level.     

Drought-induced root plasticity of two upland NERICA varieties under conditions with contrasting soil depth characteristics

To identify differences in root plasticity patterns of two upland New Rice for Africa (NERICA) varieties, NERICA 1 and 4, in response to drought under conditions with contrasting soil profile characteristics, soil moisture gradients were imposed using a sloping bed system with depths ranging 30–65 cm and a line-source sprinkler system with a uniformly shallow soil layer of 20 cm depth. Varietal differences in shoot and root growths were identified only under moderate drought conditions, 11–18% v/v soil moisture content. Further, under moderate drought soil conditions where roots could penetrate into the deep soil layer, deep root development was greater in NERICA 4 than in NERICA 1, which contributed to maintaining dry matter production. However, under soil conditions with underground impediment to deep root development, higher shoot dry weight was noted for NERICA 1 than for NERICA 4 at 11–18% v/v soil moisture content, which was attributed to increased lateral root development in the shallow soil layer in NERICA 1. Enhanced lateral root development in the 0–20-cm soil layer was identified in NERICA 1 even under soil conditions without an impediment to deep root development; however, this did not contribute to maintaining dry matter production in upland rice. Thus, we show different root developmental traits associated with drought avoidance in the two NERICA varieties, and that desirable root traits for upland rice cultivation vary depending on the target soil environment, such as the distribution of soil moisture and root penetration resistance.     

Association between aflatoxin contamination and drought tolerance traits in peanut

The current study investigates the association between drought tolerance traits and aflatoxin contamination in peanut grown under long-term drought. Two field experiments were conducted at Khon Kaen University, Thailand using a split–split plot design with three drought stress levels as main plots, 11 genotypes as sub-plots, and two soil inoculations of Aspergillus flavus treatments as sub-sub-plots. The effects of temperature, soil moisture and A. flavus population on kernel colonization and aflatoxin contamination, and drought tolerance traits viz. specific leaf area (SLA) and root length density (RLD) were measured. The results demonstrated that elevated soil temperatures and reduced soil moisture, favored aflatoxin production. Drought in combination with higher levels of A. flavus inoculum load in the soil resulted in an increase in the fungal populations in the soil which in turn resulted in increased kernel colonization and subsequent aflatoxin contamination. A combination of SLA and RLD, and kernel colonization had a significant influence on aflatoxin contamination under drought conditions in both seasons (r = 0.73** and 0.76**). The results revealed that drought tolerance traits (SLA and RLD) could be contributing to resistance to aflatoxin contamination suggesting that a combination of SLA, RLD and kernel colonization could be used as selection criteria in selecting parents for aflatoxin resistance.     

Upland rice grown in soil-filled chambers and exposed to contrasting water-deficit regimes: II. Mapping quantitative trait loci for root morphology and distribution

Root morphological characteristics are known to be important in the drought resistance of some rice (Oryza sativa L.) varieties. The identification of quantitative trait loci (QTLs) associated with root morphology and other drought resistance-related traits should help breeders produce more drought resistant varieties. Stability in the expression of root growth QTL across rooting environments is critical for their use in breeding programs. A greenhouse experiment in which a mapping population of 140 recombinant inbred lines and the parental varieties Bala and Azucena were grown in glass-sided soil chambers and evaluated for root growth and water uptake was conducted. In each of 2 years, two treatments were used; an early water-deficit (WD0) in which seeds were sown into wet soil but received no more water, and a late water-deficit (WD49) in which the plants were watered for 49 days and then received no water for a week. The major differences between treatments and years in dry matter partitioning and root growth traits are reported elsewhere. Here, the identification of QTLs for root growth traits by composite interval mapping is described. At LOD>3.2, there were six QTLs for the weight of roots below 90 cm and maximum root length, 11 for root to shoot ratio, 12 for the number of roots past 100 cm, and 14 for root thickness. A total of 24 regions were identified as containing QTLs (these regions often contained several QTLs identified for different root traits). Some were revealed only in individual experiments and/or for individual traits, while others were common to different traits or experiments. Seven QTLs, on chromosomes 1, 2, 4, 7, 9 (two QTLs) and 11, where considered particularly noteworthy. The complex results are discussed in the context of previously reported QTLs for root growth in other populations, the interaction between QTL with the environment and the value of QTLs for breeding.     

Root lodging in sunflower. Variations in anchorage strength across genotypes,soil types,crop population densities and crop developmental stages

Root lodging is an important adversity affecting sunflower (Helianthus annuus L.) production in Argentina under current husbandry practices, and may limit progress towards the achievement of higher yields via increased plant population density. Although there are perceptions that lodging susceptibility varies across developmental stages, crop population densities, genotypes and soil types, these perceptions have not been tested for sunflower using a standardized experimental protocol. This study aimed at: (1) identifying the sources of the variation in root lodging susceptibility in response to variations in crop population density in two genotypes of reputedly different susceptibility; (2) detecting the crop developmental stages most susceptible to root lodging; and (3) examining the relationships between root failure moment, root plate diameter and soil shear strength. We mechanically induced lodging at three developmental stages in plants rooted in pre-wetted plots. The crops were grown at 5.6 plants m⁻² over 3 years on either Typic Argiudoll or Typic Hapludoll soils and at 3, 5.6, 10 and 16 plants m⁻² on a Typic Argiudoll. The force needed to induce root lodging (root failure moment) and root plate diameter varied across genotypes, plant densities and developmental stages. Root failure moment and root plate diameters were greater (p < 0.05 for both variables) in the resistant hybrid across the three development stages and almost all crop population densities. For both hybrids, the most susceptible development stage was R2, and root failure moment and root plate diameter diminished (p < 0.05) as crop population density increased. Although root failure moment did not differ between soil types, root plate diameter was greater (p < 0.0001) in the coarser soil. The relationship between root failure moment and the product of root plate diameter cubed by soil shear strength (a measure of plant anchorage strength) for both hybrids, both soil types, and all crop population densities could be described by a single linear relationship (y = 0.2382x; R² = 0.812; p < 0.025).     

Lucerne shoot and root traits associated with adaptation to favourable or drought-stress environments and to contrasting soil types

Cultivar × location interaction for lucerne forage yield across northern Italy is large, repeatable and associated with summer drought-stress level and soil type. The objectives of this study were: (i) to investigate the genotypic factors associated with cultivar adaptive responses to drought-stress and soil factors; (ii) to identify adaptive traits exploitable for selection of widely adapted or specifically adapted material. Aerial dry matter (DM) over 12 harvests and shoot traits of 13 landraces and four varieties were evaluated in four artificial environments created by the factorial combination of drought-stress level (almost nil or high) and soil type (sandy-loam or silty-clay) (Exp. 1). Aerial and root DM over four or five harvests were evaluated in metal containers 55 cm × 12 cm × 75 cm deep for the factorial combinations of three varieties by two drought-stress levels by two soil types (Exp. 2), or six landraces by two drought-stress levels (Exp. 3). Cultivar × environment interaction was detected for forage yield, plant mortality after the second summer, leaflet size and stem weight. The environments of Exp. 1 reproduced well the variety adaptive responses across agricultural environments. The relationship of cultivar forage yield with shoot traits was environment-specific, i.e.: (i) strictly negative with plant mortality, in no-stress environments (where mortality and plant competition were severe); (ii) positive with stem number per plant and autumn-winter growth, in stress environments; (iii) positive with stem dry weight, in ‘stress/sandy-loam soil’; and (iv) positive with leaflet size, in ‘no-stress/sandy-loam soil’. Cultivars specifically adapted to no-stress or sandy-loam conditions showed consistently greater root DM across three soil layers than material with opposite adaptive response. Entry yields tended to inverse genetic correlation between two environments which represented contrasting geographical subregions and were characterized by different combinations of traits associated with higher yield, i.e.: (i) higher root biomass, lower plant mortality and larger leaflets, for ‘no-stress/sandy-loam soil’; and (ii) more stems per plant and greater autumn-winter growth, for ‘stress/silty-clay soil’. The difficulty of yield-based selection for wide adaptation may hardly be overcome by selection based on adaptive traits. Adaptive trait-based selection for specific adaptation may be envisaged especially for ‘stress/silty-clay soil’ conditions, for which the relevant traits are inexpensive to record, not correlated, and not subject to cultivar × environment interaction.     

QTL mapping rolling,stomatal conductance and dimension traits of excised leaves in the Bala × Azucena recombinant inbred population of rice

The identification of markers linked to genes contributing to drought resistance promises opportunities to breed high yielding rice varieties for drought prone areas. Several studies using different mapping populations have previously identified quantitative trait loci (QTLs) for traits theoretically related to drought resistance. A mapping population of 176 F₆ recombinant inbred lines (RILs) derived from two upland rice varieties with contrasting aboveground drought avoidance traits (Bala and Azucena) with a linkage map of 157 markers was used to map QTLs for aboveground leaf morphological and physiological traits related to drought avoidance. Plants were grown for 6 weeks under controlled environmental conditions with three replications. Leaves were excised and placed on a balance. The rate of leaf rolling and water loss was recorded, after which leaf area, dry weight and specific leaf area were characterized. A simple method of estimating time to stomatal closure was employed. A total of 13 QTLs were detected for leaf morphological traits, three for initial transpiration and four for the proportion of water loss required to reach a specific advanced state of leaf rolling. No QTLs were detected for time of stomatal closure or speed of leaf rolling, nor for either water loss or transpiration at stomatal closure despite clear parental differences and moderate heritabilities in most of these traits. The co-location of QTLs for traits measured here and for drought avoidance previously reported from field experiments on chromosome 1, 3 and 5 link the genetics of drought resistance to leaf dimensions and physiology. However, a physiological explanation for a QTL for drought avoidance on chromosome 7 remains elusive.     

Roles of Root Aerenchyma Development and Its Associated QTL in Dry Matter Production under Transient Moisture Stress in Rice

Abstract

Enhanced aerenchyma development in rice under transient drought-to-waterlogged (TD-W) stress promotes root system development by promoting lateral root production. This study analyzed the quantitative trait loci (QTLs) associated with the plasticity in aerenchyma development under TD-W stress. A mapping population of 60 F₂ genotypes of chromosome segment substituted lines (CSSL) derived from CSSL47 and Nipponbare crosses were grown in rootboxes and evaluated for shoot and root growth, and aerenchyma development (expressed as root porosity). The TD-W stress was imposed starting with water saturated soil condition at sowing and then to progressive drought from 0 to 21 days after sowing (DAS) prior to exposure to sudden waterlogging for another 17 days (21 to 38 DAS). We performed simple and composite interval mapping to identify QTLs for aerenchyma development. QTL associated with aerenchyma development was mapped on the short-arm of chromosome 12 and designated as qAER-12. The effect of qAER-12 on the plasticity in aerenchyma development under TD-W was significantly associated with the increase in lateral root elongation and branching. This resulted in greater root system development as expressed in total root length and consequently contributed to higher dry matter production. This qAER-12 is probably the first reported QTL associated with aerenchyma development in rice under TD-W and is a useful trait for the improvement of the adaptive capability under fluctuating soil moisture conditions.     

Growth and distribution of maize roots under nitrogen fertilization in plinthite soil

To improve efficiency of soil N and water use in the savanna, maize (Zea mays L.) cultivars with improved root systems are required. Two rainfed field experiments were conducted in Samaru, Nigeria in the 1993 and 1994 growing seasons with five maize cultivars under various rates of nitrogen fertilizer. The capacity of maize for rapid early root growth and to later develop a deep, dense root system was assessed. In addition, the effect of N fertilization on root growth of maize was studied in 1994. The widely cultivated cultivar TZB-SR had a poor root system in the surface soil layer and was more susceptible to early-season drought, as indicated by low plant vigor and aboveground dry matter yield during that time. It had a lower grain yield and a relatively small harvest index, but ranked among the highest in total aboveground dry matter production compared to other cultivars. The size of root system alone did not always relate well with grain yield among cultivars. Partitioning of dry matter within the plant was important in determining differences in grain yield and N stress tolerance between cultivars. A semiprolific cultivar (SPL) had high seedling vigour and a dense root system in the surface soil layer that conferred a greater tolerance to early-season drought stress and improved uptake of the early-season N flush, as indicated by a greater dry matter yield at 35 days after sowing (DAS). It also had a fine, deep, dense root system at flowering that could have improved water- and N-use efficiency in the subsoil (> 45 cm), thereby avoiding midseason drought stress in 1994. SPL had a large harvest index and the greatest yield among cultivars in 1994. Averaged across cultivars, greater root growth and distribution was observed at a moderate N rate of 0.56 g plant⁻¹ than at zero-N or high N (2.26 g plant⁻¹). Differences in root morphology could be valuable as selection criteria for N-efficient and drought-tolerant maize.     

Genetic mapping and quantitative trait locus analysis of resistance to sterility mosaic disease in pigeonpea [Cajanus cajan (L.) Millsp.]

Sterility mosaic disease (SMD), considered as the “green plague of pigeonpea” and caused by pigeonpea sterility mosaic virus (PPSMV) is one of the major biotic factors, which leads to heavy yield losses and hence poses a big challenge for pigeonpea production in the Indian subcontinent. Variability in the sterility mosaic pathogen revealed the occurrence of five different isolates in India. Among them, three distinct SMD isolates have been characterized, viz., Patancheru, Bangalore and Coimbatore. Molecular tools offer a viable option to tackle these biotic stresses via identification of the genomic regions associated with the trait such as SMD resistance. With an aim of identifying the gene(s)/QTLs linked with SMD resistance, two F₂ populations, i.e. ICP 8863 × ICPL 20097 (segregating for Patancheru SMD isolate) and TTB 7 × ICP 7035 (segregating for both Patancheru and Bangalore SMD isolates) were developed and F_2:3 families were phenotyped for resistance to respective isolate(s) of SMD. After screening over 3000 SSR markers on parental genotypes of each mapping population, intra-specific genetic maps comprising of 11 linkage groups and 120 and 78 SSR loci were developed for ICP 8863 × ICPL 20097 and TTB 7 × ICP 7035 populations, respectively. Composite interval mapping (CIM) based QTL analysis by using genetic mapping and phenotyping data provided four QTLs for Patancheru SMD isolate and two QTLs for Bangalore SMD isolate. Identification of different QTLs for resistance to Patancheru and Bangalore SMD isolates is an indication of involvement of different genes conferring the resistance to these two SMD isolates. One QTL namely qSMD4 identified within an interval of 2.8 cM on LG 7 explaining 24.72% of phenotypic variance, once it is validated in other genetic background, seems to be a promising QTL for use in marker assisted selection. In summary, this is the first study on development of intra-specific genetic maps and identification of QTLs for SMD resistance in pigeonpea.     

Rooting systems of oilseed and pulse crops. II: Vertical distribution patterns across the soil profile

Root distribution patterns in the soil profile are the important determinant of the ability of a crop to acquire water and nutrients for growth. This study was to determine the root distribution patterns of selected oilseeds and pulses that are widely adapted in semiarid northern Great Plains. We hypothesized that root distribution patterns differed between oilseed, pulse, and cereal crops, and that the magnitude of the difference was influenced by water availability. A field experiment was conducted in 2006 and 2007 near Swift Current (50°15′N, 107°44′W), Saskatchewan, Canada. Three oilseeds [canola (Brassica napus L.), flax (Linum usitatissimum L.), mustard (Brassica juncea L.)], three pulses [chickpea (Cicer arietinum L.), field pea (Pisum sativum L.), lentil (Lens culinaris)], and spring wheat (Triticum aestivum L.) were hand-planted in lysimeters of 15 cm in diameter and 100 cm in length which were pushed into soil with a hydraulic system. Crops were evaluated under low- (natural rainfall) and high- (rainfall + irrigation) water conditions. Vertical distribution of root systems was determined at the late-flowering stage. A large portion (>90%) of crop roots was mainly distributed in the 0-60 cm soil profile and the largest amount of crop rooting took place in the top 20 cm soil increment. Pulses had larger diameter roots across the entire soil profile than oilseeds and wheat. Canola had 28% greater root length and 110% more root tips in the top 10 cm soil and 101% larger root surface area in the 40 cm soil under high-water than under low-water conditions. In 2007, drier weather stimulated greater root growth for oilseeds in the 20-40 cm soil and for wheat in the 0-20 cm soil, but reduced root growth of pulses in the 0-50 cm soil profile. In semiarid environments, water availability did not affect the vertical distribution patterns of crop roots with a few exceptions. Pulses are excellent “digging” crops with a strong “tillage” function to the soil due to their larger diameter roots, whereas canola is more suitable to the environment with high availability of soil water that promotes canola root development.     

Comparison of Root System Development in Two Rice Cultivars During Stress Recovery from Drought and the Plant Traits for Drought Resistance

Summary

A greenhouse experiment was conducted to compare root system development of two upland rice cultivars, IRAT 13 and Senshou, during recovery from drought stress and to identify the plant traits that confer drought resistance. From 62 days after sowing (62 DAS), drought stress was given for 6 d followed by rewatering for 14 d. Root length density (RLD) and root diameter (thickness) were measured at the end of the stress and rewatering periods. Control plants were well-watered throughout the study. Gultivar IRAT 13 had thicker roots and higher relative RLD (ratio of RLD in drought-stressed plants to that in control plants) than under drought stress, and significantly higher root growth recovery after rewatering cultivar Senshou. Related plant traits such as evapotranspiration (ET), leaf and stem dry weights and weight of senescent leaves (dead leaves) in IRAT 13 were significantly more favorable for drought resistance compared to Senshou.     

Root plasticity under fluctuating soil moisture stress exhibited by backcross inbred line of a rice variety,Nipponbare carrying introgressed segments from KDML105 and detection of the associated QTLs

In rainfed lowland rice ecosystem, rice plants are often exposed to alternating recurrences of waterlogging and drought due to erratic rainfall. Such soil moisture fluctuation (SMF) which is completely different from simple or progressive drought could be stressful for plant growth, thereby causing reduction in yield. Root plasticity is one of the key traits that play important roles for plant adaptation under such conditions. This study aimed to evaluate root plasticity expression and its functional roles in dry matter production and yield under SMF using Nipponbare, KDML 105 and three backcross inbred lines (BILs) and to identify QTL(s) associated with root traits in response to SMF at two growth stages using Nipponbare/KDML105 F₂ plants. A BIL, G3-3 showed higher shoot dry matter production and yield than Nipponbare due to its greater ability to maintain stomatal conductance concomitant with greater root system development caused by promoted production of nodal and lateral roots under SMF. QTLs were identified for total nodal root length, total lateral root length, total root length, number of nodal roots, and branching index under SMF at vegetative and reproductive stages. The QTLs detected at vegetative and reproductive stages were different. We discuss here that relationship between root system of G3-3 and the detected QTLs. Therefore, G3-3 and the identified QTLs could be useful genetic materials in breeding program for improving the adaptation of rice plants in target rainfed lowland areas.     

Effects of transition season management on soil N dynamics and system N balances in rice–wheat rotations of Nepal

In the low-input rice–wheat production systems of Nepal, the N nutrition of both crops is largely based on the supply from soil pools. Declining yield trends call for management interventions aiming at the avoidance of native soil N losses. A field study was conducted at two sites in the lowland and the upper mid-hills of Nepal with contrasting temperature regimes and durations of the dry-to-wet season transition period between the harvest of wheat and the transplanting of lowland rice. Technical options included the return of the straw of the preceding wheat crop, the cultivation of short-cycled crops during the transition season, and combinations of both. Dynamics of soil N_min, nitrate leaching, nitrous oxide emissions, and crop N uptake were studied throughout the year between 2004 and 2005 and partial N balances of the cropping systems were established. In the traditional system (bare fallow between wheat and rice) a large accumulation of soil nitrate N and its subsequent disappearance upon soil saturation occurred during the transition season. This nitrate loss was associated with nitrate leaching (6.3 and 12.8 kg ha⁻¹ at the low and high altitude sites, respectively) and peaks of nitrous oxide emissions (120 and 480 mg m⁻² h⁻¹ at the low and high altitude sites, respectively). Incorporation of wheat straw at 3 Mg ha⁻¹ and/or cultivation of a nitrate catch crop during the transition season significantly reduced the build up of soil nitrate and subsequent N losses at the low altitude site. At the high altitude site, cumulative grain yields increased from 2.35 Mg ha⁻¹ with bare fallow during the transition season to 3.44 Mg ha⁻¹ when wheat straw was incorporated. At the low altitude site, the cumulative yield significantly increased from 2.85 Mg ha⁻¹ (bare fallow) to between 3.63 and 6.63 Mg ha⁻¹, depending on the transition season option applied. Irrespective of the site and the land use option applied during the transition season, systems N balances remained largely negative, ranging from −37 to −84 kg N ha⁻¹. We conclude that despite reduced N losses and increased grain yields the proposed options need to be complemented with additional N inputs to sustain long-term productivity.     

Development and Distribution of Root System in Two GrainSorghum Cultivars Originated from Sudan under Drought Stress

Abstract

The difference in rooting pattern between two grain sorghum cultivars differing in drought tolerance was investigated under drought stress. The cultivars, Gadambalia (drought-tolerant) and Tabat (droughtsusceptible), were grown in bottomless wooden or acrylic root boxes to examine root parameters. Gadambalia consistently exhibited higher dry matter production and leaf water potential than Tabat under drought stress in both root boxes. In the experiment with wooden root boxes, under a drought condition, Gadambalia extracted more water from deep soil layers (1.1-1.5 m), which was estimated from the reduction in soil water content, than Tabat. This was because Gadambalia had a significantly higher root length density in these soil layers. The high root length density was due to enhanced lateral root development in Gadambalia. In the other experiment with acrylic root boxes, though total root length in the upper soil layer (0-0.5 m) was declined by limited irrigation in both cultivars, the reduction in Gadambalia was moderate compared with that in Tabat owing to the maintenance of fine root growth. Unlike Tabat, Gadambalia had an ability to produce the nodal roots from higher internodes even under drought, which resulted in the high nodal root length of Gadambalia. The growth angle of nodal roots was significantly correlated with root diameter, and the nodal roots from the higher internodes had large diameters and penetrated into the soil more vertically. These results indicate that the responses of roots (i.e. branching and/or growth of lateral root, and nodal root emergence from higher internodes) to soil dryness could be associated with the drought tolerance of Gadambalia.     

水稻生理特性与抗旱性的相关分析及QTL定位

利用籼稻品种IR64和粳稻品种Azucena杂交产生的包含110个加倍单倍体株系的群体,在干旱胁迫和正常水分条件下,连续在2004年和2005年于抽穗期分别测定了叶片水势、相对含水量、叶绿素含量(SPAD值)、游离脯氨酸含量、气孔导度和蒸腾速率,并于成熟期取样,计算抗旱系数。与正常水分状况下相比,干旱胁迫条件下叶片的游离脯氨酸含量的增加达极显著水平,干旱胁迫条件下叶片的相对含水量、水势、叶绿素含量和气孔导度的降低均达显著或极显著水平。相关分析表明,在干旱胁迫条件下,叶片相对含水量、叶片水势与抗旱系数呈显著或极显著正相关。 利用175个RFLP标记构建的遗传连锁图谱分析了与抗旱性相关的叶片生理指标,共检测到与抗旱性相关的6个生理指标的7个加性QTL,31对上位性QTL,其中有2个主效QTL、9对上位性QTL存在环境互作效应。在两种水分条件下检测到的QTL结果有较大差异,说明干旱胁迫对控制与抗旱性相关的叶片生理性状基因的表达有显著的影响。在6个抗旱相关生理指标中,检测到的控制叶片气孔导度和水势的QTL较多,有3个加性QTL和8对上位性QTL控制气孔导度,有8对上位性QTL控制水势。     

水稻胚芽鞘长度与抗旱性的关系及QTL定位

对由水稻品种珍汕97B和旱稻品种IRAT109构建的重组自交系195个株系的胚芽鞘长度及抗旱系数的研究表明,水分胁迫下水稻重组自交系群体的胚芽鞘长度与抗旱系数的相关系数为0.2206**。应用由213个SSR标记构建的遗传连锁图对控制胚芽鞘长度和抗旱系数的QTL进行了定位。检测到胚芽鞘长度和抗旱系数的主效QTL各为13个和5个,单个QTL对表型的贡献率为2.28%～22.65%;在第9染色体上两者的QTL出现在相同的分子标记区间（RM160-RM215）。检测到胚芽鞘长度和抗旱系数的互作位点分别为17对和3对,影响胚芽鞘长度的互作位点联合贡献率为5835%;影响抗旱系数的互作位点联合贡献率为11.93%。控制胚芽鞘长度和抗旱系数的QTL分别与其他研究中控制根系性状（深根干质量、根深、根长、根数等）的QTL位于相同的标记区间。     

QTL analysis of kernel size and shape in two hexaploid wheat mapping populations

Kernel size and shape in wheat are important because of their relationship with yield and milling quality. This paper reports QTL analyses of kernel morphology in two hexaploid wheat mapping populations, grown in NY and CA. Kernel morphology was evaluated through a new and improved method, combining measurements from two orthogonal pictures. Single marker regression showed that several genomic positions, scattered through the genome, were related to kernel size and shape, in both populations. The direction of allele effects was consistent between environments, although the LOD scores varied considerably. Composite interval mapping revealed QTLs on all seven homoeologous groups, considering both populations. For the QTLs detected through this method, the signal and magnitude of additive effects were similar between environments, indicating small QTL × environment interaction. In the population W7984 × Opata 85, the strongest signal was detected on the chromosome 5B, for kernel length. In the population AC Reed × Grandin, the most important QTLs were detected on chromosome 2D, affecting the lateral dimensions of the kernel. This study agreed with previous reports that the genetic control of kernel length and width are largely independent. Additionally, it was shown that QTLs detected on different mapping populations, with identical evaluation methods, can be very distinct.