Effect of habitat fragmentation on the macroinvertebrate infaunal communities associated with the seagrass Zostera marina L.

1. The effect of habitat fragmentation was investigated in two adjacent, yet separate, intertidal Zostera marina beds in the Salcombe Estuary, Devon, UK. The seagrass bed on the west bank comprised a continuous meadow of ca. 2.3 ha, whilst the bed on the east bank of the estuary was fragmented into patches of 6–9 m². 2. Three 10 cm diameter core samples for infaunal macroinvertebrates were taken from three stations within each bed. No significant difference was found in univariate community parameters between beds, or in measured seagrass parameters. However, multivariate analysis revealed a significant difference in community composition, due mainly to small changes in species abundance rather than differences in the species present. 3. The species contributing most to the dissimilarity between the two communities were polychaetes generally associated with unvegetated habitats (e.g. Magelona mirabilis) and found to be more common in the fragmented bed. 4. A significant difference in median grain size and sorting coefficient was recorded between the two beds, and median grain size was found to be the variable best explaining multivariate community patterns. 5. The results of the study provide evidence for the effects of habitat fragmentation on the communities associated with seagrass beds, habitats which are of high conservation importance. As the infaunal community is perhaps intuitively the component least likely to be affected by fragmentation at the scale observed, the significant difference in community composition recorded has consequences for more sensitive and high‐profile parts of the biota (e.g. fish), and thus for the conservation of seagrass habitats and their associated communities. Copyright © 1999 John Wiley & Sons, Ltd.     

Linking pipefishes and seahorses to seagrass meadows in the Venice lagoon: Implications for conservation

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Fish community composition of a tropical nonestuarine embayment in Zanzibar,Tanzania

ABSTRACT:   By using a seine net, fish samples were taken from the nonestuarine Chwaka Bay (Zanzibar, Tanzania) from the mangroves, mud/sand flats and seagrass beds. Sampling was done twice per month between November 2001 and October 2002. In total, 150 fish species belonging to 55 families were identified. Diversity ( H' ) ranged from 1.9 in mud/sand flats to 3.4 within the Chwaka seagrass beds. Mean density of fishes was significantly higher in the mangrove creeks than in any other habitat (mean = 238.7 ind./1000 m²). Highest, but non-significantly different mean biomasses were recorded in the mangrove creeks (1.7 kg/1000 m²) and in the Marumbi seagrass beds (1.6 kg/1000 m²). The mangrove channel had the lowest biomass (0.6 kg/1000 m²). A high overlap in species composition (as high as 93.4% similarity) was found for adjoining habitats (i.e. mangrove creeks and mangrove channel), while habitats that were far apart showed low overlap (6.6% similarity for the Marumbi seagrass beds and mangrove creeks). On average, 58.4 and 63.2% in terms of abundance and biomass, respectively, of the fish assemblage of Chwaka Bay were of commercial fishery importance. Thus, Chwaka Bay appears to be an important juvenile habitat for various commercially important fish species.     

Spatial and temporal diversity of fish captured by light traps in various habitats in coastal waters in the oldest marine protected area in Vietnam and its implications for conservation

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Fish assemblages of Red Sea backreef biotopes

• 1. Fish assemblages of shallow‐lagoonal biotopes (seagrass beds, coral patches, reef flat and sand) were examined within the Nabq Managed Resource Protected Area (MRPA), South Sinai, Egypt. This protected area supports a small‐scale artisanal Bedouin fishery, managed by gear restrictions and a network of no‐take zones (NTZs).
• 2. Coral patches showed highest species richness and diversity of fish, followed in order by the reef flat, shallow seagrass beds and sandy bottoms.
• 3. There were clear differences in fish assemblages between the biotopes surveyed, little differences between sampling areas and no significant differences in fish assemblages between no‐take and take zones, suggesting species characteristic of these shallow‐water biotopes are dispersed along the coast irrespective of fishing pressure.
• 4. Nine species (Acanthurus nigrofuscus, Asterropteryx semipunctatus, Cryptocentrus caeruleopunctatus, Cheilio inermis, Thalassoma rueppellii, Lethrinus mahsena, Lethrinus nebulosus, Parupeneus forsskali and Pomacentrus trilineatus) had a 95% correlation to the pattern of assemblage distribution, indicating these species are the most important determinants of the fish community.
• 5. Approximately one‐third of fishes recorded appeared to be juveniles, with seagrass beds having a particularly high proportion of juvenile fish, including several commercial species.
• 6. The structure of the fish assemblage and fish size suggests that shallow‐water biotopes in Nabq MRPA may be acting as nursery areas of commercial fish for the Bedouin fishery.

Copyright © 2006 John Wiley & Sons, Ltd.     

Do different seagrass species support distinct fish communities in south‐eastern Australia?

Between spring 1998 and autumn 1999, a fine mesh seine net was used to sample fish communities at three locations in south-eastern Australian estuaries, two located near Sydney [Botany Bay (BB) and Port Hacking (PH)] and one located approximately 150 km to the south [Sussex Inlet (SI)]. At each location, fish were collected from adjacent beds of the seagrasses Posidonia australis Hooker and Zostera capricorni Ascherson. These seagrass species differ markedly in morphology and life history. Fish communities displayed significant differences between seagrass species with respect to abundances and lengths of economically important species, and the structure of assemblages at locations in PH and BB, but not in SI. Differences appeared to be related to the recruitment of juveniles of several inshore species, such as Acanthopagrus australis (Günther), Rhabdosargus sarba (Forskaal) and Girella tricuspidata (Quoy & Gaimard) to Zostera beds at BB and PH during spring and early summer. These differences were not evident over the wider spatial scale, however, the SI location did support a distinct assemblage of fish compared with locations in PH and BB. These results suggested that local recruitment events and differences in estuarine geomorphology may be important in structuring these seagrass fish communities.     

Influence of aquatic plant‐specific habitat on an assemblage of small neotropical floodplain fishes

Dibble ED, Pelicice FM. Influence of aquatic plant‐specific habitat on an assemblage of small neotropical floodplain fishes.
Ecology of Freshwater Fish 2010: 19: 381–389. © 2010 John Wiley & Sons A/S Abstract – This study investigated the effects of plant‐specific habitat on the distribution of young and small adult fishes in lagoons of the Upper Paraná River floodplain, Brazil. We compared fish catch per unit effort (CPUE) and species richness and used an indirect gradient analysis to investigate fish‐plant relationships within three aquatic macrophytes beds (Cabomba furcata, Eichhornia azurea, Nymphaea amazonum), and explored microhabitat influence (indexed by eight variables related to physical structure and water quality) on the structure of fish assemblages. Rarefaction analysis was used to compare fish species richness among the vegetated habitats. We captured a total of 1599 fish constituting 23 species, 7 families and 3 orders. Fish CPUE and species richness increased relative to microhabitat structure innate to the macrophytes; higher CPUE and richness were observed in C. furcata beds, a submerged aquatic macrophyte with finely dissected leaves. On the contrary, N. amazonum, a species that provides low microhabitat complexity, harbored fewer individual fish and number of species. Reproduction dynamics, hydrology and the amount of available plant‐generated habitat structure (surface effect) contributed to the disproportionally high number of individuals captured during the dry season. Our data suggest that the microhabitat physical structure (e.g., edge distance, stem density and patch size) provided by macrophyte beds in the lagoons of the Upper Paraná River may play a more important role than physicochemistry (e.g., oxygen, temperature and pH) at mediating distribution patterns of small‐sized fishes.     

Overlaps in habitat use of fishes between a seagrass bed and adjacent coral and sand areas at Amitori Bay, Iriomote Island, Japan: Importance of the seagrass bed as juvenile habitat

ABSTRACT:   To clarify faunal overlap between a seagrass bed and adjacent coral and sand areas, and the number of reef fishes utilizing the seagrass bed as juvenile habitat, visual censuses were conducted at Amitori Bay, Iriomote Island, Japan. The numbers of species and individuals of fishes were significantly higher in the coral area than in the seagrass bed and sand area. Cluster and ordination analyses based on the number of individuals of each species demonstrated that the fish assemblage structure differed among the three habitats in each season, but with some overlaps. Approximately half the seagrass bed fishes occurred in the adjacent coral area (coral–seagrass species). Dominant species of coral–seagrass species utilized the seagrass bed as an important juvenile habitat. Thus, some overlaps in habitat use were present between the seagrass bed and adjacent coral area. Despite such overlaps, however, coral–seagrass species accounted for only approximately 15% of coral reef fishes overall, indicating that most of the latter hardly utilize the seagrass bed directly in the study area.     

长江芜湖江段鱼类多样性及其群落结构的时空格局

为制定合理的渔业资源保护措施与管理对策,2009年按季度共4次调查了长江芜湖江段鱼类多样性及其群落结构。结果显示:该江段现有鱼类54种,其中以似鳊(Parabramis pekinensis)、油(Hemiculter bleekeri bleek-eri warpacho)、短颌鲚(Coilia brachygnathus Kreyenberg et Pappenheim)、鲫(Carassius auratus)等中小型鱼类为常见种和优势种,表明了该江段的鱼类组成存在明显的小型化特点。长江干流沿岸浅水区的鱼类多样性最高,江心深水区最低,而青弋江支流、漳河支流和漳河河口的居中,青弋江的鱼类种数和个体数都显著低于沿岸浅水区,但漳河的鱼类数量与沿岸浅水区无明显差异。江心深水区的鱼类群落与其它样点明显不同,而青弋江的鱼类群落与沿岸浅水区、漳河及其河口的鱼类群落也存在部分差异。鱼类群落结构的季节动态无显著性。     

Microhabitat preferences of fish assemblages in the Udzungwa Mountains (Eastern Africa)

Environmental flow assessment (EFA) involving microhabitat preference models is a common approach to set ecologically friendly flow regimes in territories with ongoing or planned projects to develop river basins, such as many rivers of Eastern Africa. However, habitat requirements of many African fish species are poorly studied, which may impair EFAs. This study investigated habitat preferences of fish assemblages, based on species presence–absence data from 300 microhabitats collected in two tributaries of the Kilombero River (Tanzania), aiming to disentangle differences in habitat preferences of African species at two levels: assemblage (i.e. between tributaries) and species (i.e. species‐specific habitat preferences). Overall, flow velocity, which implies coarser substrates and shallower microhabitats, emerged as the most important driver responsible of the changes in stream‐dwelling assemblages at the microhabitat scale. At the assemblage level, we identified two important groups of species according to habitat preferences: (a) cover‐orientated and limnophilic species, including Barbus spp., Mormyridae and Chiloglanis deckenii, and (b) rheophilic species, including Labeo cylindricus, Amphilius uranoscopus and Parakneria spekii. Rheophilic species preferred boulders, fast flow velocity and deeper microhabitats. At the species level, we identified species‐specific habitat preferences. For instance, Barbus spp. preferred low flow velocity shallow depth and fine‐to‐medium substratum, whereas L. cylindricus and P. spekii mainly selected shallow microhabitats with coarse substrata. Knowledge of habitat preferences of these assemblages and species should enhance the implementation of ongoing and future EFA studies of the region.     

基于河流网络体尺度的皖河河源溪流鱼类群落的空间格局

2013年7-8月对大别山皖河河源1～3级溪流的鱼类进行了调查,着重从河流网络体空间尺度研究了鱼类多样性及群落结构的空间格局,探讨了局域栖息地条件和支流空间位置对鱼类群落的影响.1～3级溪流间,鱼类物种数随溪流级别增大显著增多,但个体数无显著变化(P＞0.05);长河、潜水和皖水3条支流间鱼类物种数和个体数均无显著差异(P＞0.05).鱼类物种数受局域栖息地条件(海拔)和支流空间位置(河流级别和下游量级)的联合影响,但鱼类个体数仅受局域栖息地条件(海拔)的影响.不同溪流级别和不同支流间的群落结构均无显著差异(P＞0.05).同物种数类似,鱼类群落结构也受局域过程(海拔)和空间过程(汇合量级和下游量级)的联合影响.本研究表明,总体上皖河河源溪流网络体中的鱼类群落是局域过程和空间过程联合作用的产物.因此,为合理保护和管理皖河河源的溪流鱼类物种,有必要兼顾局域栖息地条件与河流网络连通性的保护和恢复.     

Patterns of species and functional diversity around a coastal marine reserve: a fisheries perspective

• 1. Marine protected areas (MPAs) are expected to function simultaneously as biological conservation and fisheries management tools, but empirical evidence linking biodiversity conservation with fisheries benefits is scarce. Around the Medes Islands marine reserve (Spain, NW Mediterranean) patterns of fish catch diversity, catch (CPUE) and income (IPUE) were assessed and the economic value of diversity for local fisheries was explored by combining a Geographic Information System (GIS) analysis with geostatistics.
• 2. Catch data were derived from the trammel net fleet operating around the MPA to gain information on species diversity, functional diversity, functional redundancy, CPUE and IPUE.
• 3. Results revealed significant impact of both the fishing prohibition in the MPA and the presence of seagrass beds on diversity metrics, catch and income. Clear differences in functional redundancy in fish assemblages were found within the study area, indicating greater resilience of the fish assemblage against fishing pressure or human impact close to the MPA (?2 km). In contrast, fish assemblages beyond 2 km of the MPA border are more vulnerable to disturbance. High values of diversity, CPUE and IPUE overlapped close to the MPA border and close to seagrass beds.
• 4. The spatial approach developed suggests that, in addition to the more commonly studied effect of density‐dependent spillover of adult fish, increased levels of ecological diversity and economic diversity can also result in fisheries benefits of an MPA. Hence, the fishing regulations in and around the Medes Islands marine reserve have shown that biological conservation and fisheries benefits can be complementary in the long‐term, which should be considered in future policies for MPAs or MPA networks.

Copyright © 2008 John Wiley & Sons, Ltd.     

Diel variation in the seagrass ichthyofaunas of three intermittently open estuaries in south-eastern Australia: implications for improving fish diversity assessments

Diel variation in the ichthyofaunas associated with Zostera capricorni Ascherson was investigated in three intermittently open estuaries in the Illawarra region, New South Wales. Each estuary showed differing diel shifts in fish assemblages, which appeared to be related to estuary size. In the largest estuary (Lake Illawarra) significantly more species were caught during the night than the day for all months. In contrast, there was little diel variation in the fish assemblages at Werri Lagoon and Shellharbour Lagoon, although many species were only caught during the night at both estuaries. The distinct diel changes at Lake Illawarra was thought to be attributable to the relatively deep channels adjacent to the seagrass beds which are better habitats for larger fishes compared with the shallow sand bars without deep channels throughout the two smaller estuaries. The composition of fish species within the three estuaries were significantly different, although each assemblage was characterised by large numbers of small-sized fish (<100 mm FL) indicating the importance of intermittently open estuaries as fish habitats. It was concluded that night sampling provided a more complete picture of the ichthyofaunas associated with Z. capricorni . As a result, inclusion of night sampling in fish diversity assessments would increase the chance of catching diurnally rare species and therefore attain a better representation of the true community structure.     

夏季台湾海峡北部及邻近海域鱼类群落结构及环境解释

根据2014年7月台湾海峡中部、北部及邻近水域渔业资源底拖网调查资料,分析了该水域的鱼类群落结构,包括种类组成、区系特点、优势种、多样性及空间分布等,探讨了鱼类群落结构与环境因子的关系,并阐述了鱼类群落的群聚结构。结果表明,调查海域共捕获鱼类84种,隶属于16目、48科、69属。从种类数上看,适温类型以暖水种为主,区系类型以大陆架浅水底层鱼类以及大陆架岩礁性鱼类为主;从生物量组成上看,区系类型则以大陆架浅水中低层鱼类为主。优势种为带鱼(Trichiurus japonicus)和七星底灯鱼(Benthosema pterotum),合计渔获质量占总渔获质量的46.92%,对总渔获质量的回归贡献值分别为0.30和0.62;高生物量区集中分布在台湾海峡北口海域,在空间上表现为明显的生态位重叠。层次聚类分析将群落优势物种划分为2个主要的生态类型:沿海类型和广布类型,沿海类型的代表性物种包括龙头鱼、黄鲫、鳓;广布类型物种有带鱼、窄颅带鱼、七星底灯鱼、竹荚鱼、刺鲳、麦氏犀鳕。Shannon-Wiener多样性、Pielou均匀度和Margalef丰富度的变化范围分别为0.22~2.31、0.11~0.72、0.36~4.04,平均值分别为1.44、0.51、1.59,丰富度与总渔获质量表现为显著负相关(r=?0.65),与深度显著正相关(r=0.48)。物种?环境典范对应分析表明,与物种空间结构关系密切的影响因子为底盐、底层无机氮、底温、表底温差和水深;而影响群落优势群体分布的因子为底温、底盐和底层无机氮。     

Importance of various marine coastal habitats during the life cycle of Spratelloides delicatulus in Con Dao,the oldest MPA in Vietnam

• 1. Marine protected areas (MPAs) are set up to conserve biodiversity, but their design is not always based on strictly scientific considerations. Ideally, an MPA should protect all key habitats necessary for a marine species to complete its life cycle. The identification of these key habitats is complex, especially during the early life of marine fishes.
• 2. A widely distributed tropical and important low trophic‐level fish species, Spratelloides delicatulus (Clupeidae), was used to evaluate the significance of various coastal habitats for its larvae and juveniles in the Con Dao Archipelago MPA in Vietnam. Early stages (larvae and juveniles) were sampled monthly over one year (June 2016 to May 2017) using light traps in three main habitats (seagrass beds, coral reefs and harbour). The species was identified using morphometry and DNA barcoding. Age and growth variables were estimated using otolith daily growth increments.
• 3. A total of 3,581 fish were caught. The species was not found in captures between January and February, directly linked to the decrease in seawater temperature and was most abundant from April to June. For a subsample of 248 fish (7–38 mm standard length), ages ranged from 7 to 108 days.
• 4. Captures and back‐calculated birthdates using otolith daily increments showed that S. delicatulus spawns during the period of high seawater temperature, from March to October. The species colonizes all three habitats during the early stages (0–26 days old), with growth rate lowest on the seagrass beds. Nevertheless, the species occupies seagrass beds exclusively during the older stages.
• 5. The conservation of seagrass beds in the Con Dao archipelago is essential for protection of juvenile stages of this species but this habitat is presently not included in the MPA patches. Establishment of a continuum of protected areas linking habitats, rather than the existing patches is needed to conserve the complete life cycle of this species in the Con Dao MPA.

     

Habitat heterogeneity in eelgrass fish assemblage diversity and turnover

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The effects of distance from coral reefs on seagrass nursery use by 5 emperor fishes at the southern Ryukyu Islands,Japan

Whilst the importance of seagrass beds as nurseries for coral reef fishes has been clearly recognized, the vast majority of early studies on fish nursery habitats emphasized the close proximity of the latter to coral reefs. To determine the potential nursery role of isolated seagrass beds, we investigated the degree to which juvenile emperor fishes (Lethrinidae) utilized seagrass beds in the presence/absence of adjacent coral habitats at Ishigaki Island (southern Japan), such fishes being known to use seagrass beds as nurseries. Seagrass beds in close proximity to coral habitats (distance between the two habitats of 50–200 m) had greater densities of lethrinid juveniles than those without adjacent coral habitats (2.5–4 km) for 3 different sites investigated, although a significant difference was obtained only for 1 site. Juveniles of Lethrinus atkinsoni, L. obsoletus, L. harak, and L. nebulosus were observed in seagrass beds with and without adjacent coral habitats, whereas L. ornatus occurred only in the former. Overall, most lethrinid juveniles utilize seagrass beds irrespective of the presence of adjacent adult coral habitat, suggesting that both types of seagrass beds would contribute to lethrinid adult populations. Therefore, management efforts for lethrinid populations should be applied not only to contiguous coral-seagrass habitat systems but also to isolated habitats.     

The importance of bare marine sedimentary habitats for maintaining high polychaete diversity and the implications for the design of marine protected areas

• 1. Bare intertidal sedimentary habitats have received relatively little attention compared with their neighbouring vegetated habitats. An ecological comparison of benthic faunal assemblages inhabiting tropical intertidal seagrass beds and bare sediments has been made to assess the faunal similarity between the two habitats in south‐east Asia.
• 2. The poorly developed taxonomy of most invertebrate taxa in the region precluded the full identification of many faunal groups. Only the polychaetes — which accounted for 76% of all the macrofaunal organisms collected — were identified to the lowest possible taxonomic level, yielding 177 nominal species belonging to 35 families. Ecological analyses suggested that although each habitat had a distinct polychaete assemblage, there were few differences between habitats based on a range of calculated assemblage diversity metrics.
• 3. Further analyses were applied to the data to test the performance of three strategies for optimizing the selection of sites for inclusion in potential marine protected areas. Strategies were based either on the total number of species, the number of rare or endemic species, or on the level of species richness (used as a surrogate for community structure).
• 4. All three strategies consistently captured above average numbers of species at most levels of conservation intensity. The merits of each strategy are considered in turn.

Copyright © 2009 John Wiley & Sons, Ltd.     

Distribution and habitat associations of the endangered Oxleyan pygmy perch,Nannoperca oxleyana Whitley,in eastern Australia

• 1. Detailed knowledge of habitat requirements is particularly relevant to the conservation of rare and threatened fish species because habitat fragmentation and loss are usually the major threats to species with limited distributions and restricted habitat requirements, and habitat restoration is typically the first step in species' recovery plans. This paper documents the macro‐, meso‐ and microhabitat habitat associations of a small threatened percichthyid, the Oxleyan pygmy perch, Nannoperca oxleyana, in south‐eastern Queensland and north‐eastern New South Wales (NSW), Australia.
• 2. The species' range encompasses approximately 530 km of coastline from Coongul Creek on Fraser Island, Queensland (25° 16′S, 153° 09′E) south to Tick Gate Swamp near the township of Wooli, NSW (29° 54′S, 153° 15′E). It is confined primarily to dystrophic, acidic, freshwater systems draining through sandy coastal lowlands and Banksia ‐ dominated heath ecosystems.
• 3. Both lentic and lotic environments provide habitat for N. oxleyana but the species is found only in slow‐flowing pools and backwaters of river channels and tributaries as well as in swampy drainages, lakes, ponds and dams.
• 4. Trapping studies found that an abundance of structural aquatic habitat was a defining microhabitat feature either in the form of beds of emergent or submerged plants or the presence of steep/undercut banks fringed with the semi‐submerged branches and fine rootlets of riparian vegetation. When present, leaf litter and snags also provided cover.
• 5. Recent and historical survey data suggest that human activities have had a significant influence on contemporary species presence/absence patterns and may have been responsible for the prominent gaps within the Queensland‐NSW distribution of N. oxleyana.
• 6. The distinctive relationships of N. oxleyana with features of aquatic habitat at the macro‐, meso‐ and microhabitat scale demonstrate principles applicable to any study focused on the conservation of an endangered fish species.

Copyright © 2008 John Wiley & Sons, Ltd.     

Factors affecting fish assemblage structure during seasonal stream drying

Abstract –  We evaluated fish assemblage structure during stream drying in north west Arkansas in 2002 and 2003. We sampled fish with a seine and backpack electrofisher and measured habitat variables along transects. Linear regression models were selected a priori and ranked according to Akaike's Information Criterion. In 2002, total fish density was negatively related to pool area and maximum depth, and positively related to canopy openness and substrate diversity. Similarly, central stoneroller ( Campostoma anomalum , Rafinesque) and creek chub ( Semotilus atromaculatus , Mitchill) densities were negatively related to maximum pool depth. In 2003, fish species richness was positively related to pool area whereas total fish, central stoneroller, and creek chub densities were negatively related to maximum pool depth. In addition, total fish density was negatively related to substrate diversity. Results indicated that physical factors are important predictors of fish assemblage structure during stream drying. However, differences among response variables between years indicated that the magnitude of stream drying might be critical in intermittent streams.