Climate variability and marine survival of coho salmon (Oncorhynchus kisutch) in the Oregon production area

Time series of adult recruitment for natural runs of coho salmon from the Oregon coastal region (1970–94) and marine survival of hatchery-reared coho salmon from California to Washington (1960–94) are significantly correlated with a suite of meteorological and oceanographic variables related to the biological productivity of the local coastal region. These variables include strong upwelling, cool sea surface temperature (SST), strong wind mixing, a deep and weakly stratified mixed layer, and low coastal sea level, indicating strong transport of the California Current. Principal component analysis indicates that these variables work in concert to define the dominant modes of physical variability, which appear to regulate nutrient availability and biological productivity. Multiple regression analysis suggests that coho marine survival is significantly and independently related to the dominant modes acting over this region in the periods when the coho first enter the ocean and during the overwintering/spring period prior to their spawning migration. Linear relationships provided good fits to the data and were robust, capable of predicting randomly removed portions of the data set.     

A model‐based meso‐zooplankton production index and its relation to the ocean survival of juvenile coho (Oncorhynchus kisutch)

The ocean survival of coho salmon (Oncorhynchus kisutch) off the Pacific Northwest coast has been related to oceanographic conditions regulating lower trophic level production during their first year at sea. Coastal upwelling is recognized as the primary driver of seasonal plankton production but as a single index upwelling intensity has been an inconsistent predictor of coho salmon survival. Our goal was to develop a model of upwelling‐driven meso‐zooplankton production for the Oregon shelf ecosystem that was more immediately linked to the feeding conditions experienced by juvenile salmon than a purely physical index. The model consisted of a medium‐complexity plankton model linked to a simple one‐dimensional, cross‐shelf upwelling model. The plankton model described the dynamics of nitrate, ammonium, small and large phytoplankton, meso‐zooplankton (copepods), and detritus. The model was run from 1996 to 2007 and evaluated on an interannual scale against time‐series observations of copepod biomass. The model’s ability to capture observed interannual variability improved substantially when the copepod community size distribution was taken into account each season. The meso‐zooplankton production index was significantly correlated with the ocean survival of hatchery coho salmon from the Oregon production area, although the coastal upwelling index that drove the model was not itself correlated with survival. Meso‐zooplankton production within the summer quarter (July–September) was more strongly correlated with coho survival than was meso‐zooplankton production in the spring quarter (April–June).     

Ocean distribution and habitat associations of yearling coho (Oncorhynchus kisutch) and Chinook (O. tshawytscha) salmon in the northern California Current

Yearling juvenile coho and Chinook salmon were sampled on 28 cruises in June and September 1981–85 and 1998–07 in continental shelf and oceanic waters off the Pacific Northwest. Oceanographic variables measured included temperature, salinity, water depth, and chlorophyll concentration (all cruises) and copepod biomass during the cruises from 1998–07. Juvenile salmonids were found almost exclusively in continental shelf waters, and showed a patchy distribution: half were collected in ～5% of the collections and none were collected in ～40% of the collections. Variance‐to‐mean ratios of the catches were high, also indicating patchy spatial distributions for both species. The salmon were most abundant in the vicinity of the Columbia River and the Washington coast in June; by September, both were less abundant, although still found mainly off Washington. In June, the geographic center‐of‐mass of the distribution for each species was located off Grays Harbor, WA, near the northern end of our sampling grid, but in September, it shifted southward and inshore. Coho salmon ranged further offshore than Chinook salmon: in June, the average median depth where they were caught was 85.6 and 55.0 m, respectively, and in September it was 65.5 and 43.7 m, respectively. Abundances of both species were significantly correlated with water depth (negatively), chlorophyll (positively) and copepod biomass (positively). Abundances of yearling Chinook salmon, but not of yearling coho salmon, were correlated with temperature (negatively). We discuss the potential role of coastal upwelling, submarine canyons and krill in determining the spatial distributions of the salmon.     

Food habits and marine survival of juvenile Chinook and coho salmon from marine waters of Southeast Alaska

Little is known about the food habits of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in marine environments of Alaska, or whether their diets may have contributed to extremely high marine survival rates for coho salmon from Southeast Alaska and much more modest survival rates for Southeast Alaskan Chinook salmon. To address these issues, we documented the spatial and temporal variability of diets of both species collected from marine waters of Southeast Alaska during summers of 1997–2000. Food habits were similar: major prey items of both species included fishes, crab larvae, hyperiid amphipods, insects, and euphausiids. Multivariate analyses of diet composition indicated that the most distinct groups were formed at the smallest spatial and temporal scales (the haul), although groups also formed at larger scales, such as by month or habitat type. Our expectations for how food habits would influence survival were only partially supported. As predicted, Southeast Alaskan coho salmon had more prey in their stomachs overall [1.8% of body weight (BW)] and proportionally far fewer empty stomachs (0.7%) than either Alaskan Chinook (1.4% BW, 5.1% empty) or coho salmon from other regions. However, contrary to our expectations, coho salmon diets contained surprisingly few fish (49% by weight). Apparently, Alaskan coho salmon achieved extremely high marine survival rates despite a diet consisting largely of small, less energetically‐efficient crustacean prey. Our results suggest that diet quantity (how much is eaten) rather than diet quality (what is eaten) is important to marine survival.     

卫星遥感速报北太平洋渔场海温方法研究

渔场海温速报是开展渔情分析和确定中心渔场的基础，卫星遥感技术可以快速提供大面积海洋环境参数分布图，由于大洋渔场超出了陆基卫星地面站的接收范围，发展船载遥感系统是提供远洋渔场海洋环境条件的有效途径。本研究介绍基于船载的北太平洋渔场海温速报系统、海表温度遥感反演算法和渔场海温速报产品制作等内容。海温精度分析结果表明，卫星遥感海表温度与船测温度具有良好的一致性，周平均偏差小于0．01℃，RMS平均值为0．7967℃。系统已业务试运行2年，完成北太平洋渔场海温速报产品制作33期，取得了预期目标。     

Interannual and interdecadal variability in juvenile coho salmon (Oncorhynchus kisutch) diets in relation to environmental changes in the northern California Current

The feeding habits of juvenile coho salmon, Oncorhynchus kisutch, in the northern California Current were examined using samples from two different time periods (1980–85 and 1998–2003) of highly contrasting oceanographic conditions. The goal was to test the influence of interannual and interdecadal changes in taxonomic composition of prey, feeding intensity, and size spectra of teleost prey. Analyses were done for samples taken both early in the summer (June) shortly after the salmon enter the ocean, and also in late summer (September) following some ocean residency. Fish prey dominated coho salmon diets by weight during most years, but this trend was more pronounced during the 1980–85 sampling period. In terms of numerical composition, the diets were more variable on an interannual basis, but decapod larvae and euphausiids were important prey in most years. Pteropods and copepods were important prey during weak upwelling or El Niño years, whereas euphausiids were important during strong upwelling or otherwise highly productive years. Hyperiid amphipods comprised a substantial proportion of the diets only in 2000. Coho salmon showed highly significant differences in prey composition among years or between decades both in weight and numerical composition. The percentage of empty stomachs was highly variable by year in both June and September, but was significantly different only for September between decades. In contrast, an index of feeding intensity did not show many significant changes in either comparison. However, the relative size ratios for fish prey consumed were highly variable by year, and larger than average fish prey were consumed during 1998, leading to the highest feeding intensity observed.     

Spatial correlation patterns in coastal environmental variables and survival rates of salmon in the north-east Pacific Ocean

We examined spatial correlations for three coastal variables [upwelling index, sea surface temperature (SST), and sea surface salinity (SSS)] that might affect juvenile salmon ( Oncorhynchus spp.) during their early marine life. Observed correlation patterns in environmental variables were compared with those in survival rates of pink ( O. gorbuscha ), chum ( O. keta ), and sockeye ( O. nerka ) salmon stocks to help identify appropriate variables to include in models of salmon productivity. Both the upwelling index and coastal SST were characterized by strong positive correlations at short distances, which declined slowly with distance in the winter months, but much more rapidly in the summer. The SSS had much weaker and more variable correlations at all distances throughout the year. The distance at which stations were no longer correlated (spatial decorrelation scale) was largest for the upwelling index (> 1000 km), intermediate for SST (400–800 km in summer), and shortest for SSS (< 400 km). Survival rate indices of salmon showed moderate positive correlations among adjacent stocks that decreased to zero at larger distances. Spatial decorrelation scales ranged from approximately 500 km for sockeye salmon to approximately 1000 km for chum salmon. We conclude that variability in the coastal marine environment during summer, as well as variability in salmon survival rates, are dominated by regional scale variability of several hundred to 1000 km. The correlation scale for SST in the summer most closely matched the observed correlation scales for survival rates of salmon, suggesting that regional-scale variations in coastal SST can help explain the observed regional-scale covariation in survival rates among salmon stocks.     

Nomads no more: early juvenile coho salmon migrants contribute to the adult return

The downstream movement of coho salmon fry and parr in the fall, as distinct from the spring migration of smolts, has been well documented across the range of the species. In many cases, these fish overwinter in freshwater, but they sometimes enter marine waters. It has long been assumed that these latter fish did not survive to return as adults and were ‘surplus’ to the stream's carrying capacity. From 2004 to 2010, we passive integrated transponder tagged 25,981 juvenile coho salmon in three streams in Washington State to determine their movement, survival and the contribution of various juvenile life histories to the adult escapement. We detected 86 returning adults, of which 32 originated from fall/winter migrants. Half of these fall/winter migrants spent ~1 year in the marine environment, while the other half spent ~2 years. In addition, the median return date for fall/winter migrants was 16 days later than spring migrants. Our results indicated that traditional methods of spring‐only smolt enumeration may underestimate juvenile survival and total smolt production, and also overestimate spring smolt‐to‐adult return (SAR). These are important considerations for coho salmon life cycle models that assume juvenile coho salmon have a fixed life history or use traditional parr‐to‐smolt and SAR rates.     

Survival of smaller sport caught chinook, Oncorhynchus tshawytscha (Walbaum), and coho, Oncorhynchus kisutch (Walbaum), salmon from Lake Michigan and its management implications

Abstract The survival of small-sized (<50.8 cm) chinook salmon, Oncorhynchus tshawytscha (Walbaum), and coho salmon, Oncorhynchus kitsutch (Walbaum), caught by sport fishing was determined to assess the potential for increasing the size limit for these fish. Fishermen were recently catching smaller salmon than in the 1970s, but salmon growth rates had not changed. To be an effective management option, the survival rate of hooked and returned fish must be high. The overall survival rates were high: 76% for chinook salmon and 70% for coho salmon. There was no significant difference in survival of the coho salmon with size of hook used ( P = 0.31). Any mortality among fish was generally acute; fish hooked deep in the mouth or gills generally bled and died shortly after capture. Fish hooked in the gills had a significantly greater mortality ( P = 0.0002). The overall high survival rate for these species was the result of a small proportion of fish being hooked in the gills or deep in the mouth. Since the survival rate of the salmon was high, the size limit could be increased to allow smaller fish to grow to sizes preferred by sport fishermen.     

Skipjack tuna fishery in relation to sea surface temperature off the southern Brazilian coast

Several oceanographic studies have associated tuna fisheries to sea surface temperature (SST) fields, although catch per unit of effort (CPUE) has not shown a clear relationship with SST. However, most results concerned species that occur deep in the water column. In this paper, we present a study on the relationship between SST and CPUE for the skipjack tuna fisheries off the southern Brazilian coast, which take place at the sea surface. We use historical data from the Japanese fleet, which operated in the area from July 1982 to June 1992. Fishing sets occurred only in areas where SST ranged from 17°C to 30°C. Frequency of occurrence vs. SST showed a Gaussian distribution, with highest CPUEs in waters of SST 22°-26.5°C. The relationship between CPUE (or fishing set occurrence) and SST varied seasonally. Largest CPUEs occurred in summer, independently of SST. Therefore, temperature alone could not be used as a determinant of CPUE, suggesting that seasonal variability of other environmental parameters has a stronger effect on the CPUE than does SST. However, when the seasonal cycle was excluded from the data sets, a relationship between the interannual variability of SST and CPUE became apparent. Cross-correlation analysis between CPUE and SST has shown that oscillations in CPUE anomalies precede oscillations in SST anomalies by a month, but the mechanism relating them in this way is unknown.     

Effect of thyroid-stimulating hormone on the physiology and morphology of the thyroid gland in coho salmon,Oncorhynchus kisutch

Activity of the thyroid gland of the coho salmon,Oncorhynchus kisutch, was assessed by physiological, histological and ultrastructural criteria after treatment with graded doses of bovine thyrotropin (bTSH) in January and March. Average plasma thyroxine (T₄) levels increased from about 0.8 ng/ml in saline-injected controls to about 15 ng/ml in fish treated with four intraperitoneal injections of 0.8 lU bTSH. Light-microscope observations of one m-thick sections stained with methylene blue and azure II, showed that bTSH treatment increased epithelial height in both presmolts and smolts. Ultrastructural manifestations of increased activity owing to bTSH treatment were also seen, along with evidence of follicle proliferation. Cytoplasmic organelles and secretory granules increased in numbers with increased dosage of bTSH.     

Seasonal increase in sea temperature triggers pancreas disease outbreaks in Norwegian salmon farms

Pancreas disease (PD) is a viral disease causing negative impacts on economy of salmon farms and fish welfare. Its transmission route is horizontal, and water transport by ocean currents is an important factor for transmission. In this study, the effect of temperature changes on PD dynamics in the field has been analysed for the first time. To identify the potential time of exposure to the virus causing PD, a hydrodynamic current model was used. A cohort of salmon was assumed to be infected the month it was exposed to virus from other infective cohorts by estimated water contact. The number of months from exposure to outbreak defined the incubation period, which was used in this investigation to explore the relationship between temperature changes and PD dynamics. The time of outbreak was identified by peak in mortality based on monthly records from active sites. Survival analysis demonstrated that cohorts exposed to virus at decreasing sea temperature had a significantly longer incubation period than cohorts infected when the sea temperature was increasing. Hydrodynamic models can provide information on the risk of being exposed to pathogens from neighbouring farms. With the knowledge of temperature‐dependent outbreak probability, the farmers can emphasize prophylactic management, avoid stressful operations until the sea temperature is decreasing and consider removal of cohorts at risk, if possible.     

Dosage-dependent differences in the effect of aromatizable and nonaromatizable androgens on the resulting phenotype of coho salmon (Oncorhynchus kisutch)

This study was conducted to investigate whether aromatization to estrogen could be the cause for the paradoxical feminization of gonads of sexually-undifferentiated fish after treatment with androgen at either high doses or for long periods. The aromatizable androgen 17-methyltestosterone (MT) and the nonaromatizable androgen 17-methyldihydrotestosterone (MDHT) were administered to groups of newly hatched coho salmon (Oncorhynchus kisutch) in a single 2h immersion at concentrations ranging from 6.25 to 6,400µg/l. The effects of treatment were evaluated by determining the resultant proportion of males in each experimental group. The effects of steroid administration on the final mean weight, length and condition factor were also determined. An increase in all these three variables was observed in the groups treated with the higher doses of MT. Regarding the resultant sexual phenotype, the response to both androgens was similar at the majority of doses tested. However, at the highest dose, the proportion of females increased with respect to that of males for MT, but not for MDHT. Since the major difference between the two androgens tested is their capacity to be aromatized, it seems that aromatization to estrogen, rather than inhibition of the biosynthesis of endogenous androgen, may explain the paradoxical feminization encountered.     

Quantifying the effects of wind, upwelling, curl, sea surface temperature and sea level height on growth and maturation of a California Chinook salmon (Oncorhynchus tshawytscha) population

We used retrospective scale growth chronologies and return size and age of female Chinook salmon (Oncorhynchus tshawytscha) from a northern California, USA, population collected over 22 run years and encompassing 18 complete cohorts to model the effects of oceanographic conditions on growth during ocean residence. Using path analyses and partial least squares regressive approaches, we related growth rate and maturation to seven environmental variables (sea level height, sea surface temperature, upwelling, curl, scalar wind, northerly pseudo‐wind stress and easterly pseudo‐wind stress). During the first year of life, growth was negatively related to summer sea surface temperature, curl and scalar winds, and was positively related to summer upwelling. During the second, third and fourth growth years growth rate was negatively related to sea level height and sea surface temperature, and was positively related to upwelling and curl. The age at maturation and the fork length at which three ocean‐winter fish returned were related to the environment experienced during the spring before the third winter at sea (the year prior return). Faster growth during the year before return led to earlier maturation and larger return size.     

Marine temperatures experienced by postsmolts and the survival of Atlantic salmon, Salmo salar L., in the North Sea area

The survival of two Atlantic salmon stocks that inhabit rivers confluent with the North Sea was examined in respect to historical distributions of sea surface water temperatures. The rivers Figgjo and North Esk are relatively small salmon rivers in southern Norway and eastern Scotland, respectively. Wild salmon smolts have been tagged in these rivers since 1965. Tag returns were used to evaluate the survival of salmon in the North Sea. Survival rates of one-sea-winter (1SW) and 2SW fish were correlated within stocks, as well as between stocks. Survival rates were compared with the areal extent of thermal habitat in the north-eastern Atlantic Ocean. A positive correlation was found between the area of 8–10°C water in May and the survival of salmon. A reciprocal negative correlation was also found between survival and 5–7°C water in the same month. An analysis of sea surface temperature distributions for periods of good vs. poor salmon survival showed that when cool surface waters dominate the Norwegian coast and North Sea during May, salmon survival has been poor. Conversely, when the 8°C isotherm has extended northward along the Norwegian coast during May, survival has been good. The effect of water temperature distributions on the growth of postsmolts and other survival factors are discussed.     

Effects of juvenile size at release and early marine growth on adult return rates for Hokkaido chum salmon (Oncorhynchus keta) in relation to sea surface temperature

Using path analyses, we investigated relationships between size at release from hatcheries, the early marine growth of juveniles, and adult return rates for chum salmon from five river stocks of Hokkaido, Japan, in relation to sea surface temperature during ocean residence. Marine growth was estimated using scales collected from 11 760 adults of age 0.3 (1980–2004). The growth and survival of each stock appeared to have a different suite of regulatory processes. Interannual variability in return rates was mainly regulated by size at release in two stocks from the Sea of Okhotsk. A similar relationship was found in one stock from the Sea of Japan, but growth during coastal residency also affected their return rates. In two stocks from the Pacific coast of Hokkaido, variability in return rates was not related to size at release or to the coastal growth of juveniles, but with offshore growth in the Sea of Okhotsk, the nursery area for juveniles after leaving Japanese coastal waters. Whereas coastal growth tended to be negatively correlated with size at release in some stocks, offshore growth was positively associated with the August–November sea surface temperature in all stocks. This study confirmed that mortality of juvenile salmon occurred in two phases, during the coastal residency and the late period of the growing season, but the relative importance of both phases varied by stock and region, which probably regulated year‐class strength of Hokkaido chum salmon.     

Tracking environmental processes in the coastal zone for understanding and predicting Oregon coho (Oncorhynchus kisutch) marine survival

To better understand and predict Oregon coho (Oncorhynchus kisutch) marine survival, we developed a conceptual model of processes occurring during four sequential periods: (1) winter climate prior to smolt migration from freshwater to ocean, (2) spring transition from winter downwelling to spring/summer upwelling, (3) the spring upwelling season and (4) winter ocean conditions near the end of the maturing coho's first year at sea. We then parameterized a General Additive Model (GAM) with Oregon Production Index (OPI) coho smolt‐to‐adult survival estimates from 1970 to 2001 and environmental data representing processes occurring during each period (presmolt winter SST, spring transition date, spring sea level, and post‐smolt winter SST). The model explained a high and significant proportion of the variation in coho survival (R² = 0.75). The model forecast of 2002 adult survival rate ranged from 4 to 8%. Our forecast was higher than predictions based on the return of precocious males (‘jacks’), and it won't be known until fall 2002 which forecast is most accurate. An advantage to our environmentally based predictive model is the potential for linkages with predictive climate models, which might allow for forecasts more than 1 year in advance. Relationships between the environmental variables in the GAM and others (such as the North Pacific Index and water column stratification) provided insight into the processes driving production in the Pacific Northwest coastal ocean. Thus, coho may be a bellwether for the coastal environment and models such as ours may apply to populations of other species in this habitat.     

Effects of feeding diets containing various dietary protein and lipid ratios on the growth performance and pigmentation of post-juvenile coho salmon Oncorhynchus kisutch reared in sea water

Six extruded dry diets formulated to contain one of two levels of digestible protein (37% or 44%) and one of three levels of digestible lipid (16%, 23% or 30%) on a dry weight basis and a seventh diet (commercial control) were used to feed triplicate groups of post‐juvenile coho salmon Oncorhynchus kisutch in sea water. Fish were fed to satiation twice daily for 168 days. Growth performances were monitored every 28 days. On day 168, samples were taken from each replicate group per dietary treatment for determinations of whole‐body and muscle proximate compositions. Fatty acid compositions and astaxanthin concentration in both the experimental diets and fish flesh were assessed by gas chromatography (GC) and high‐performance liquid chromatography (HPLC) respectively. Coho salmon fed diets containing the higher lipid levels (23–30%) exhibited improved feed efficiency, protein efficiency ratio, percentage protein deposition and percentage gross energy utilization. Higher protein content diets supported better growth than those that had lower protein content, but the former led to lowered protein efficiency ratio, percentage protein deposition and gross energy utilization. Fish fed the diets with high lipid levels (23% or 30%) also had higher astaxanthin content in raw flesh.     

Assessing the northern diversion of sockeye salmon returning to the Fraser River, BC

We examine the oft-quoted relationship between the migration of Fraser River sockeye salmon around the northern end of Vancouver Island and sea surface temperatures. We examine the methods used to estimate the northern diversion and conclude that the estimates have a sufficiently low expected error to form a useful representation of sockeye salmon behaviour. The well-known relationship with Kains Island sea surface temperature is explored and problems are pointed out. In particular, we explore why Kains Island temperatures are good predictors of salmon behaviour in May when the sockeye can be over 1000 km away, but the coastal temperatures are poor predictors in July to September when the salmon are actually close by. We show that a more robust predictor can be developed using open ocean temperature fields and we show why Kains Island fails as a predictor during the summer months. Finally, we show by cross-validation that the northern diversion is predictable with an r.m.s. error of about 0.1.     

Spatial distribution of ocean habitat of yearling Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon off Washington and Oregon,USA

We determined the habitat usage and habitat connectivity of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in continental shelf waters off Washington and Oregon, based on samples collected every June for 9 yr (1998–2006). Habitat usage and connectivity were evaluated using SeaWiFS satellite‐derived chlorophyll a data and water depth. Logistic regression models were developed for both species, and habitats were first classified using a threshold value estimated from a receiver operating characteristic curve. A Bernoulli random process using catch probabilities from observed data, i.e. the frequency of occurrence of a fish divided by the number of times a station was surveyed, was applied to reclassify stations. Zero‐catch probabilities of yearling Chinook and yearling coho salmon decreased with increases in chlorophyll a concentration, and with decreases in water depth. From 1998 to 2006, ～ 47% of stations surveyed were classified as unfavorable habitat for yearling Chinook salmon and ～ 53% for yearling coho salmon. Potentially favorable habitat varied among years and ranged from 9 856 to 15 120 km² (Chinook) and from 14 800 to 16 736 km² (coho). For both species, the smallest habitat area occurred in 1998, an El Niño year. Favorable habitats for yearling Chinook salmon were more isolated in 1998 and 2005 than in other years. Both species had larger and more continuous favorable habitat areas along the Washington coast than along the Oregon coast. The favorable habitats were also larger and more continuous nearshore than offshore for both species. Further investigations on large‐scale transport, mesoscale physical features, and prey and predator availability in the study area are necessary to explain the spatial arrangement of juvenile salmon habitats in continental shelf waters.